BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034060
MEDRKEKNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEDFIN
PTAPSNNKAHNNQDDEQHHFHQSHHHHSPTTRRSFLSYFNCCVKA

High Scoring Gene Products

Symbol, full name Information P value
AT5G09960 protein from Arabidopsis thaliana 5.6e-29
AT5G64850 protein from Arabidopsis thaliana 2.8e-27
AT5G19473 protein from Arabidopsis thaliana 1.3e-13

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034060
        (105 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2178203 - symbol:AT5G09960 "AT5G09960" species...   322  5.6e-29   1
TAIR|locus:2177704 - symbol:AT5G64850 "AT5G64850" species...   306  2.8e-27   1
TAIR|locus:1009023455 - symbol:AT5G19473 "AT5G19473" spec...   177  1.3e-13   1


>TAIR|locus:2178203 [details] [associations]
            symbol:AT5G09960 "AT5G09960" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0006661 "phosphatidylinositol biosynthetic process"
            evidence=RCA] GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
            HOGENOM:HOG000243431 ProtClustDB:CLSN2689572 EMBL:BT024549
            EMBL:AK176727 IPI:IPI00528733 RefSeq:NP_568222.1 UniGene:At.32433
            PaxDb:Q67XU1 PRIDE:Q67XU1 EnsemblPlants:AT5G09960.1 GeneID:830857
            KEGG:ath:AT5G09960 TAIR:At5g09960 eggNOG:NOG331179
            InParanoid:Q67XU1 OMA:QSENQRE PhylomeDB:Q67XU1 ArrayExpress:Q67XU1
            Genevestigator:Q67XU1 Uniprot:Q67XU1
        Length = 112

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 64/110 (58%), Positives = 75/110 (68%)

Query:     2 EDRKEKNAPWLSVPQFGDWDQKG--QVPDYSLDFSKIREMRKQNKRDVSRASLGNEEDFI 59
             +DRKEKN PWLSVPQFGDWDQKG   +PDYS+DF+KIREMRKQNKRD SRASLGNEE+ I
Sbjct:     3 DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELI 62

Query:    60 NPTAPSNNKAH----NNQDDEXXXXXXXXXXXXPTTRRSFLSYFNCCVKA 105
              P   + + A      +++              P+TRRS  S FNCCVKA
Sbjct:    63 KPPESATSTAELTTVQSENQREFSPSHHHQPHSPSTRRSMFSCFNCCVKA 112


>TAIR|locus:2177704 [details] [associations]
            symbol:AT5G64850 "AT5G64850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
            evidence=RCA] GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:BT028877 EMBL:AK229636 IPI:IPI00518993 RefSeq:NP_568998.1
            UniGene:At.28935 IntAct:Q0WN19 PRIDE:Q0WN19
            EnsemblPlants:AT5G64850.1 GeneID:836608 KEGG:ath:AT5G64850
            TAIR:At5g64850 eggNOG:NOG294398 HOGENOM:HOG000243431
            InParanoid:Q0WN19 OMA:ELINPFH PhylomeDB:Q0WN19
            ProtClustDB:CLSN2689572 Genevestigator:Q0WN19 Uniprot:Q0WN19
        Length = 114

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 66/114 (57%), Positives = 72/114 (63%)

Query:     1 MEDRKE-KNAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEDFI 59
             MEDRKE KN+PWLSVPQFGDWDQKG   DYS+DFSKIREMRK NKRD SRASLGNEE+ I
Sbjct:     1 MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELI 60

Query:    60 NP--------TAPSNNKAHNNQDDEXXXXXXXXXXXXPTTRRSFLSYFNCCVKA 105
             NP        TA        + D+             P+ RR   S FNCCVKA
Sbjct:    61 NPFHDQPPVDTAKPKKLTTVHSDNNNRNEFSHHHPHSPSRRRRIFSCFNCCVKA 114


>TAIR|locus:1009023455 [details] [associations]
            symbol:AT5G19473 "AT5G19473" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF05627 EMBL:CP002688 InterPro:IPR008700
            IPI:IPI00657350 RefSeq:NP_001031906.1 UniGene:At.48034
            EnsemblPlants:AT5G19473.1 GeneID:3770676 KEGG:ath:AT5G19473
            OMA:ILTYINC PhylomeDB:F4K158 Uniprot:F4K158
        Length = 99

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 37/105 (35%), Positives = 58/105 (55%)

Query:     3 DRKEKNAPWLSVPQFGDWDQKG--QVPDYSLDFSKIREMRKQNKRDVSRASLGNEEDFIN 60
             D++ +NA W  VPQFG WDQKG     +YS+ FSK R  RKQNK  V  +SLG+E++ + 
Sbjct:     2 DKRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELMV 61

Query:    61 PTAPSNNKAHNNQDDEXXXXXXXXXXXXPTTRRS-FLSYFNCCVK 104
                 ++ + H+  + +            P  ++   L+Y NCC++
Sbjct:    62 SVRRNHQQLHHRHETQDDD---------PVMKKKRILTYINCCIR 97


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.129   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      105        93   0.00091  102 3  11 23  0.41    30
                                                     29  0.41    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  553 (59 KB)
  Total size of DFA:  124 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.24u 0.14s 12.38t   Elapsed:  00:00:00
  Total cpu time:  12.24u 0.14s 12.38t   Elapsed:  00:00:00
  Start:  Fri May 10 13:27:42 2013   End:  Fri May 10 13:27:42 2013

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