Query 034072
Match_columns 104
No_of_seqs 106 out of 1029
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 16:02:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034072.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034072hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 2.2E-35 7.6E-40 243.0 10.9 95 1-95 354-448 (490)
2 2a7v_A Serine hydroxymethyltra 99.9 2.4E-22 8.3E-27 164.0 11.3 95 1-95 354-448 (490)
3 1rv3_A Serine hydroxymethyltra 99.6 1.2E-15 4.1E-20 122.1 10.5 91 2-92 345-435 (483)
4 3h7f_A Serine hydroxymethyltra 99.5 1E-13 3.5E-18 109.0 8.9 88 2-89 327-415 (447)
5 3n0l_A Serine hydroxymethyltra 99.2 2E-10 6.9E-15 87.3 10.3 86 2-87 302-388 (417)
6 3gbx_A Serine hydroxymethyltra 99.0 3.8E-09 1.3E-13 80.1 9.6 86 2-87 309-395 (420)
7 3ecd_A Serine hydroxymethyltra 98.8 3.7E-08 1.3E-12 74.7 10.8 87 2-88 310-397 (425)
8 2vi8_A Serine hydroxymethyltra 97.9 6.4E-05 2.2E-09 56.5 9.1 87 2-88 300-387 (405)
9 2dkj_A Serine hydroxymethyltra 97.9 0.00012 4E-09 55.1 10.0 86 2-87 301-387 (407)
10 3ly1_A Putative histidinol-pho 95.0 0.17 5.8E-06 37.0 8.8 60 11-86 291-350 (354)
11 3hbx_A GAD 1, glutamate decarb 94.9 0.12 4.2E-06 41.1 8.3 84 2-91 363-447 (502)
12 1iug_A Putative aspartate amin 94.7 0.11 3.8E-06 37.7 7.1 75 2-86 272-346 (352)
13 3get_A Histidinol-phosphate am 94.6 0.15 5.2E-06 37.5 7.8 60 11-85 305-364 (365)
14 3g0t_A Putative aminotransfera 94.2 0.15 5.2E-06 38.5 7.0 67 10-86 369-435 (437)
15 3ffh_A Histidinol-phosphate am 94.1 0.24 8.3E-06 36.4 7.9 66 2-84 297-362 (363)
16 3cq5_A Histidinol-phosphate am 94.0 0.32 1.1E-05 36.1 8.4 65 2-86 302-366 (369)
17 2gb3_A Aspartate aminotransfer 94.0 0.31 1E-05 36.8 8.4 70 10-87 326-401 (409)
18 2bkw_A Alanine-glyoxylate amin 93.6 0.25 8.5E-06 36.3 7.1 68 11-86 315-382 (385)
19 2zyj_A Alpha-aminodipate amino 93.5 0.67 2.3E-05 34.6 9.4 79 2-88 315-393 (397)
20 3h14_A Aminotransferase, class 93.4 0.27 9.1E-06 36.6 7.1 71 8-86 309-380 (391)
21 3if2_A Aminotransferase; YP_26 93.4 0.53 1.8E-05 35.7 8.8 71 11-87 364-439 (444)
22 3g7q_A Valine-pyruvate aminotr 93.3 0.47 1.6E-05 35.4 8.3 72 10-87 337-412 (417)
23 1jg8_A L-ALLO-threonine aldola 93.1 0.3 1E-05 35.6 6.8 64 10-86 281-344 (347)
24 3tqx_A 2-amino-3-ketobutyrate 93.1 0.23 7.7E-06 36.8 6.2 76 2-86 319-394 (399)
25 3dzz_A Putative pyridoxal 5'-p 93.0 0.34 1.2E-05 35.7 7.1 75 2-86 312-387 (391)
26 1gd9_A Aspartate aminotransfer 93.0 0.12 4.2E-06 38.4 4.6 76 2-87 309-385 (389)
27 4eb5_A Probable cysteine desul 92.9 0.18 6.2E-06 37.0 5.4 78 12-95 289-380 (382)
28 3nra_A Aspartate aminotransfer 92.9 0.31 1.1E-05 36.2 6.7 67 11-86 336-403 (407)
29 1fc4_A 2-amino-3-ketobutyrate 92.8 0.18 6E-06 37.7 5.2 76 2-86 320-395 (401)
30 2yrr_A Aminotransferase, class 92.8 0.55 1.9E-05 33.8 7.8 76 2-87 275-352 (353)
31 2po3_A 4-dehydrase; external a 92.7 0.57 1.9E-05 35.5 8.1 79 13-95 297-393 (424)
32 3kki_A CAI-1 autoinducer synth 92.7 0.25 8.5E-06 37.2 6.0 76 2-87 328-403 (409)
33 3kax_A Aminotransferase, class 92.6 0.69 2.4E-05 33.9 8.2 74 2-85 308-382 (383)
34 3zrp_A Serine-pyruvate aminotr 92.2 0.76 2.6E-05 33.5 8.0 64 12-87 299-362 (384)
35 3mc6_A Sphingosine-1-phosphate 92.2 0.29 9.8E-06 38.1 6.0 71 2-88 367-437 (497)
36 2fyf_A PSAT, phosphoserine ami 92.0 0.96 3.3E-05 33.9 8.5 65 12-86 332-396 (398)
37 4hvk_A Probable cysteine desul 91.9 0.49 1.7E-05 34.4 6.6 73 13-91 290-376 (382)
38 4dq6_A Putative pyridoxal phos 91.8 0.9 3.1E-05 33.4 8.1 74 2-85 316-390 (391)
39 2bwn_A 5-aminolevulinate synth 91.6 0.3 1E-05 36.5 5.3 76 2-86 322-398 (401)
40 3ez1_A Aminotransferase MOCR f 91.4 1.6 5.4E-05 32.8 9.2 72 10-88 343-415 (423)
41 3fdb_A Beta C-S lyase, putativ 91.4 0.37 1.3E-05 35.4 5.5 75 2-86 300-374 (377)
42 1m32_A 2-aminoethylphosphonate 91.2 0.56 1.9E-05 33.9 6.3 65 12-86 298-363 (366)
43 3f9t_A TDC, L-tyrosine decarbo 91.2 0.82 2.8E-05 33.3 7.2 68 2-86 329-396 (397)
44 1ax4_A Tryptophanase; tryptoph 90.9 0.5 1.7E-05 36.1 6.0 84 2-89 343-442 (467)
45 2dr1_A PH1308 protein, 386AA l 90.8 1.2 4.2E-05 32.5 7.9 67 11-87 312-378 (386)
46 3ele_A Amino transferase; RER0 90.7 1.6 5.5E-05 32.3 8.5 71 2-86 324-394 (398)
47 1wyu_B Glycine dehydrogenase s 90.7 0.86 2.9E-05 35.6 7.3 77 2-87 364-440 (474)
48 2c0r_A PSAT, phosphoserine ami 90.7 0.42 1.4E-05 35.2 5.2 63 12-86 297-359 (362)
49 2vyc_A Biodegradative arginine 90.5 0.37 1.3E-05 40.9 5.4 71 2-85 520-602 (755)
50 2r2n_A Kynurenine/alpha-aminoa 90.5 1.8 6.1E-05 32.8 8.8 71 10-86 351-422 (425)
51 3l8a_A METC, putative aminotra 90.3 0.42 1.4E-05 36.3 5.0 75 2-86 345-420 (421)
52 3hdo_A Histidinol-phosphate am 90.0 2.2 7.6E-05 31.2 8.7 61 11-85 292-352 (360)
53 1t3i_A Probable cysteine desul 89.9 0.8 2.7E-05 33.9 6.3 70 11-86 339-411 (420)
54 3euc_A Histidinol-phosphate am 89.9 0.73 2.5E-05 33.8 5.9 61 11-85 305-365 (367)
55 3a2b_A Serine palmitoyltransfe 89.8 0.7 2.4E-05 34.4 5.9 76 2-86 315-390 (398)
56 2w8t_A SPT, serine palmitoyltr 89.7 0.94 3.2E-05 34.5 6.7 78 2-86 336-413 (427)
57 2dgk_A GAD-beta, GADB, glutama 89.7 1.8 6.2E-05 33.2 8.4 82 2-89 348-435 (452)
58 1j32_A Aspartate aminotransfer 89.7 0.91 3.1E-05 33.6 6.4 73 2-86 312-385 (388)
59 1vp4_A Aminotransferase, putat 89.6 1 3.5E-05 34.1 6.7 78 2-87 340-417 (425)
60 3ppl_A Aspartate aminotransfer 89.4 2.6 8.7E-05 31.8 8.9 72 10-88 348-420 (427)
61 2zc0_A Alanine glyoxylate tran 88.7 1.9 6.5E-05 32.0 7.6 69 11-86 333-402 (407)
62 1bs0_A Protein (8-amino-7-oxon 88.7 0.61 2.1E-05 34.5 4.8 74 2-84 310-383 (384)
63 1kmj_A Selenocysteine lyase; p 88.6 2 6.9E-05 31.5 7.6 79 2-86 322-403 (406)
64 1v2d_A Glutamine aminotransfer 88.6 1.5 5.2E-05 32.3 6.9 74 2-88 298-371 (381)
65 1v72_A Aldolase; PLP-dependent 88.4 1.5 5.1E-05 31.6 6.7 68 2-87 285-352 (356)
66 3fkd_A L-threonine-O-3-phospha 88.4 2.5 8.6E-05 30.7 8.0 65 10-86 275-340 (350)
67 2fnu_A Aminotransferase; prote 88.3 0.45 1.5E-05 34.8 3.8 71 12-86 283-370 (375)
68 3f0h_A Aminotransferase; RER07 88.2 1.5 5.1E-05 32.1 6.6 73 3-86 299-372 (376)
69 1w23_A Phosphoserine aminotran 87.9 0.81 2.8E-05 33.3 5.0 63 12-86 296-358 (360)
70 3d6k_A Putative aminotransfera 87.5 5.5 0.00019 30.0 9.6 70 10-87 346-417 (422)
71 1mdo_A ARNB aminotransferase; 87.4 2.3 8E-05 31.3 7.3 73 11-87 295-385 (393)
72 3ftb_A Histidinol-phosphate am 87.1 4.2 0.00014 29.4 8.5 64 11-86 296-359 (361)
73 2x5d_A Probable aminotransfera 86.7 1.4 4.8E-05 33.0 5.8 67 12-88 328-398 (412)
74 2z9v_A Aspartate aminotransfer 86.3 2.6 8.8E-05 31.0 7.0 67 11-86 302-369 (392)
75 1b5p_A Protein (aspartate amin 86.2 1.1 3.7E-05 33.5 4.9 63 12-85 320-382 (385)
76 2x5f_A Aspartate_tyrosine_phen 86.1 2.2 7.5E-05 32.1 6.7 59 12-86 368-427 (430)
77 3ffr_A Phosphoserine aminotran 86.1 2.4 8E-05 30.6 6.6 61 12-84 300-360 (362)
78 3ju7_A Putative PLP-dependent 86.0 1.1 3.8E-05 34.0 5.0 74 10-88 285-375 (377)
79 1xi9_A Putative transaminase; 85.7 1.9 6.6E-05 32.2 6.1 66 12-86 334-401 (406)
80 1elu_A L-cysteine/L-cystine C- 85.6 1.2 4.1E-05 32.6 4.8 68 2-82 318-386 (390)
81 2ch1_A 3-hydroxykynurenine tra 85.6 3.4 0.00011 30.4 7.3 65 13-86 316-381 (396)
82 1qz9_A Kynureninase; kynurenin 85.5 3.6 0.00012 30.5 7.5 69 2-86 329-400 (416)
83 2oqx_A Tryptophanase; lyase, p 85.4 2.5 8.4E-05 32.2 6.7 75 11-89 352-443 (467)
84 3ezs_A Aminotransferase ASPB; 85.4 2.7 9.3E-05 30.7 6.7 66 10-86 307-373 (376)
85 3qgu_A LL-diaminopimelate amin 85.4 2.2 7.6E-05 32.3 6.4 73 2-86 365-438 (449)
86 1vjo_A Alanine--glyoxylate ami 85.2 3.3 0.00011 30.4 7.2 65 12-85 327-392 (393)
87 2huf_A Alanine glyoxylate amin 85.1 3 0.0001 30.6 6.8 67 12-87 315-382 (393)
88 2dou_A Probable N-succinyldiam 84.9 1.8 6.1E-05 31.9 5.5 65 11-85 311-375 (376)
89 1sff_A 4-aminobutyrate aminotr 84.8 1.6 5.4E-05 32.7 5.3 64 12-86 352-422 (426)
90 2eh6_A Acoat, acetylornithine 84.5 2 7E-05 31.4 5.7 58 11-84 317-374 (375)
91 3jtx_A Aminotransferase; NP_28 84.3 2.7 9.3E-05 30.9 6.3 67 11-85 325-395 (396)
92 3ruy_A Ornithine aminotransfer 84.2 3.4 0.00012 30.5 6.8 59 11-85 333-391 (392)
93 3piu_A 1-aminocyclopropane-1-c 84.2 2.1 7.1E-05 32.4 5.7 77 2-87 349-431 (435)
94 1d2f_A MALY protein; aminotran 84.0 2.4 8.2E-05 31.3 5.9 66 12-86 321-387 (390)
95 3p1t_A Putative histidinol-pho 84.0 2 6.9E-05 30.8 5.4 59 11-85 276-334 (337)
96 1c7n_A Cystalysin; transferase 83.7 2.2 7.6E-05 31.5 5.6 67 11-86 324-391 (399)
97 1o4s_A Aspartate aminotransfer 83.3 3.8 0.00013 30.5 6.8 69 2-85 317-386 (389)
98 2z61_A Probable aspartate amin 82.4 2.6 9E-05 30.9 5.6 71 2-85 297-368 (370)
99 3lws_A Aromatic amino acid bet 81.9 1.6 5.5E-05 31.8 4.2 79 2-85 277-356 (357)
100 1c4k_A Protein (ornithine deca 81.9 3.6 0.00012 34.9 6.8 55 20-87 511-565 (730)
101 2ord_A Acoat, acetylornithine 81.2 6.4 0.00022 29.1 7.3 61 12-86 335-395 (397)
102 7aat_A Aspartate aminotransfer 81.1 1.8 6E-05 32.2 4.2 45 23-85 356-400 (401)
103 3isl_A Purine catabolism prote 80.9 10 0.00034 27.9 8.3 66 12-86 322-388 (416)
104 2e7j_A SEP-tRNA:Cys-tRNA synth 80.3 1 3.4E-05 32.8 2.6 77 2-86 289-368 (371)
105 1fg7_A Histidinol phosphate am 80.1 3.5 0.00012 30.4 5.6 56 11-82 296-352 (356)
106 1wyu_A Glycine dehydrogenase ( 80.0 5.8 0.0002 30.2 6.9 72 2-84 365-436 (438)
107 3ei9_A LL-diaminopimelate amin 79.7 4.2 0.00014 30.6 6.0 69 2-82 353-422 (432)
108 3e9k_A Kynureninase; kynurenin 79.7 1.9 6.5E-05 33.1 4.1 60 12-87 400-460 (465)
109 1uu1_A Histidinol-phosphate am 79.5 1.8 6.1E-05 31.5 3.7 52 12-82 281-332 (335)
110 3nnk_A Ureidoglycine-glyoxylat 79.4 8 0.00027 28.4 7.3 65 12-86 322-388 (411)
111 3rq1_A Aminotransferase class 79.4 4.6 0.00016 30.2 6.0 55 13-86 359-413 (418)
112 3aow_A Putative uncharacterize 79.1 7.1 0.00024 30.1 7.2 68 12-86 376-443 (448)
113 2c81_A Glutamine-2-deoxy-scyll 79.1 6.4 0.00022 29.5 6.8 71 13-86 304-412 (418)
114 2o0r_A RV0858C (N-succinyldiam 79.0 3.9 0.00013 30.6 5.5 78 2-86 307-394 (411)
115 1z7d_A Ornithine aminotransfer 78.4 8.4 0.00029 29.4 7.4 62 12-86 366-427 (433)
116 4adb_A Succinylornithine trans 78.1 13 0.00045 27.2 8.2 63 12-87 336-399 (406)
117 2pb2_A Acetylornithine/succiny 78.0 9.8 0.00033 28.8 7.6 63 12-87 354-417 (420)
118 1eg5_A Aminotransferase; PLP-d 77.9 11 0.00037 27.2 7.6 70 12-87 292-375 (384)
119 1yiz_A Kynurenine aminotransfe 77.8 5.4 0.00018 29.9 6.0 77 2-85 336-426 (429)
120 3dr4_A Putative perosamine syn 77.8 3.3 0.00011 30.6 4.8 70 12-85 305-390 (391)
121 1o69_A Aminotransferase; struc 77.1 3.9 0.00013 30.6 5.0 60 23-86 311-385 (394)
122 3fvs_A Kynurenine--oxoglutarat 76.5 2.1 7.2E-05 31.9 3.4 78 2-86 328-420 (422)
123 1b9h_A AHBA synthase, protein 76.4 7.2 0.00024 28.7 6.3 71 12-86 290-386 (388)
124 1bw0_A TAT, protein (tyrosine 76.3 14 0.00048 27.3 8.0 73 2-86 334-411 (416)
125 1u08_A Hypothetical aminotrans 76.0 11 0.00038 27.6 7.2 71 2-81 310-383 (386)
126 3mad_A Sphingosine-1-phosphate 75.7 11 0.00038 29.3 7.5 73 2-89 398-470 (514)
127 2oat_A Ornithine aminotransfer 75.1 15 0.00052 28.1 8.1 62 12-86 375-437 (439)
128 3pj0_A LMO0305 protein; struct 74.8 2.9 9.8E-05 30.4 3.7 77 2-84 279-358 (359)
129 1iqo_A Hypothetical protein MT 74.6 2 6.8E-05 27.9 2.4 35 8-44 46-80 (88)
130 3ihj_A Alanine aminotransferas 74.6 11 0.00037 29.6 7.3 58 22-87 433-492 (498)
131 2ez2_A Beta-tyrosinase, tyrosi 74.4 5.1 0.00017 30.4 5.1 84 2-89 333-432 (456)
132 1iay_A ACC synthase 2, 1-amino 74.1 4.3 0.00015 30.5 4.6 68 11-86 352-425 (428)
133 1vef_A Acetylornithine/acetyl- 74.0 9.2 0.00032 28.1 6.4 58 12-85 336-394 (395)
134 3kgw_A Alanine-glyoxylate amin 73.7 11 0.00037 27.3 6.6 64 13-86 321-386 (393)
135 3uwc_A Nucleotide-sugar aminot 73.2 6.1 0.00021 28.8 5.2 58 25-86 294-369 (374)
136 1lc5_A COBD, L-threonine-O-3-p 72.8 7.6 0.00026 28.4 5.6 63 11-86 296-358 (364)
137 2x3l_A ORN/Lys/Arg decarboxyla 72.7 6 0.00021 30.6 5.2 68 2-86 284-351 (446)
138 3asa_A LL-diaminopimelate amin 72.6 6 0.00021 29.4 5.1 74 2-86 316-391 (400)
139 3cai_A Possible aminotransfera 72.3 10 0.00035 27.8 6.3 64 12-83 335-404 (406)
140 4eu1_A Mitochondrial aspartate 71.4 7 0.00024 29.1 5.2 45 23-85 364-408 (409)
141 3op7_A Aminotransferase class 71.4 10 0.00035 27.6 6.0 63 12-86 306-369 (375)
142 2o1b_A Aminotransferase, class 71.2 6.4 0.00022 29.5 5.0 73 2-85 327-400 (404)
143 3nx3_A Acoat, acetylornithine 71.0 11 0.00039 27.7 6.3 61 12-86 333-393 (395)
144 3f6t_A Aspartate aminotransfer 70.5 7.8 0.00027 30.8 5.6 55 26-89 472-526 (533)
145 3bb8_A CDP-4-keto-6-deoxy-D-gl 70.4 9.4 0.00032 28.9 5.8 60 23-86 356-434 (437)
146 1s0a_A Adenosylmethionine-8-am 69.1 11 0.00037 28.3 5.8 59 13-86 364-422 (429)
147 3dyd_A Tyrosine aminotransfera 67.8 30 0.001 26.0 8.2 73 2-86 345-422 (427)
148 4h51_A Aspartate aminotransfer 67.5 8.4 0.00029 30.1 5.1 46 23-87 371-416 (420)
149 1yaa_A Aspartate aminotransfer 66.0 8.1 0.00028 28.7 4.6 45 24-86 365-409 (412)
150 1svv_A Threonine aldolase; str 65.1 5 0.00017 28.7 3.1 68 2-86 288-356 (359)
151 3b1d_A Betac-S lyase; HET: PLP 68.7 1.3 4.6E-05 32.9 0.0 66 12-86 325-391 (392)
152 2oga_A Transaminase; PLP-depen 63.7 8.2 0.00028 28.8 4.2 59 24-86 318-394 (399)
153 3lvm_A Cysteine desulfurase; s 63.2 19 0.00065 26.5 6.1 71 13-91 318-402 (423)
154 1pff_A Methionine gamma-lyase; 61.3 14 0.00049 26.4 5.0 65 11-83 244-329 (331)
155 3bwn_A AT1G70560, L-tryptophan 60.7 4.3 0.00015 30.6 2.2 59 14-86 327-385 (391)
156 3ke3_A Putative serine-pyruvat 59.6 14 0.00047 27.4 4.8 53 30-86 322-374 (379)
157 1ajs_A Aspartate aminotransfer 58.9 15 0.00052 27.1 4.9 44 25-86 366-409 (412)
158 3tcm_A Alanine aminotransferas 58.5 19 0.00064 28.2 5.6 51 29-87 443-493 (500)
159 3e2y_A Kynurenine-oxoglutarate 57.2 15 0.00051 27.0 4.6 74 2-82 321-407 (410)
160 2q7w_A Aspartate aminotransfer 55.5 9.7 0.00033 27.9 3.3 42 25-84 354-395 (396)
161 3t18_A Aminotransferase class 54.3 21 0.00071 26.4 5.0 36 14-63 358-393 (413)
162 4f4e_A Aromatic-amino-acid ami 54.2 15 0.00052 27.5 4.2 45 23-85 375-419 (420)
163 3qm2_A Phosphoserine aminotran 52.5 36 0.0012 26.2 6.3 62 13-86 322-383 (386)
164 3tfu_A Adenosylmethionine-8-am 51.6 44 0.0015 25.8 6.6 59 13-86 393-451 (457)
165 2eo5_A 419AA long hypothetical 50.6 13 0.00043 28.0 3.3 61 12-86 356-416 (419)
166 3meb_A Aspartate aminotransfer 50.3 20 0.00068 27.4 4.4 47 23-86 396-442 (448)
167 2hox_A ALLIIN lyase 1; cystein 50.2 19 0.00066 27.5 4.3 61 12-85 361-422 (427)
168 3vax_A Putative uncharacterize 50.1 9.8 0.00033 27.8 2.5 67 12-86 316-398 (400)
169 2aeu_A Hypothetical protein MJ 48.9 20 0.00069 26.7 4.2 51 28-86 318-369 (374)
170 3n75_A LDC, lysine decarboxyla 48.2 17 0.0006 30.8 4.1 48 23-83 508-555 (715)
171 4f21_A Carboxylesterase/phosph 46.8 17 0.00059 25.8 3.4 45 25-86 201-245 (246)
172 2ay1_A Aroat, aromatic amino a 46.7 22 0.00075 26.0 4.0 48 14-84 345-392 (394)
173 1u9d_A Hypothetical protein VC 46.1 56 0.0019 21.8 5.7 41 45-94 9-49 (122)
174 2cjg_A L-lysine-epsilon aminot 45.9 43 0.0015 25.5 5.7 61 12-86 386-446 (449)
175 3b8x_A WBDK, pyridoxamine 5-ph 45.9 43 0.0015 24.5 5.6 66 12-81 303-389 (390)
176 3cu5_A Two component transcrip 45.9 51 0.0017 20.3 5.4 76 11-89 49-125 (141)
177 3a8u_X Omega-amino acid--pyruv 45.1 38 0.0013 25.4 5.3 61 12-86 381-445 (449)
178 3frk_A QDTB; aminotransferase, 44.4 29 0.00099 25.2 4.4 56 25-84 291-364 (373)
179 3b46_A Aminotransferase BNA3; 44.4 43 0.0015 25.4 5.5 74 2-82 351-441 (447)
180 3m5u_A Phosphoserine aminotran 43.7 60 0.002 24.7 6.2 62 13-86 296-358 (361)
181 1zod_A DGD, 2,2-dialkylglycine 42.3 44 0.0015 24.8 5.2 66 12-86 358-430 (433)
182 3fsl_A Aromatic-amino-acid ami 40.8 28 0.00096 25.4 3.8 43 24-84 354-396 (397)
183 4a6r_A Omega transaminase; tra 39.8 88 0.003 23.7 6.6 50 26-89 401-450 (459)
184 2zy4_A L-aspartate beta-decarb 39.6 51 0.0018 26.3 5.4 53 27-88 470-522 (546)
185 4aik_A Transcriptional regulat 39.0 28 0.00096 22.8 3.3 67 28-95 65-144 (151)
186 3i4j_A Aminotransferase, class 37.8 82 0.0028 23.4 6.1 54 27-86 373-426 (430)
187 3gju_A Putative aminotransfera 36.0 1.2E+02 0.004 23.0 6.8 50 26-87 406-455 (460)
188 2rag_A Dipeptidase; aminohydro 35.6 34 0.0012 27.2 3.8 34 61-94 380-414 (417)
189 3k40_A Aromatic-L-amino-acid d 35.5 41 0.0014 26.1 4.2 76 2-86 394-469 (475)
190 1ayg_A Cytochrome C-552; elect 35.3 22 0.00074 20.5 2.0 16 68-83 63-78 (80)
191 3hmu_A Aminotransferase, class 34.7 1.1E+02 0.0037 23.7 6.5 49 26-88 404-452 (472)
192 3dod_A Adenosylmethionine-8-am 34.4 1.1E+02 0.0038 23.0 6.4 49 26-88 395-443 (448)
193 1vpq_A Hypothetical protein TM 34.1 48 0.0016 24.7 4.2 72 14-85 151-240 (273)
194 3id7_A Dipeptidase; streptomyc 33.1 54 0.0018 26.0 4.5 30 61-91 341-372 (400)
195 3dfz_A SIRC, precorrin-2 dehyd 31.3 38 0.0013 24.5 3.1 71 12-84 92-164 (223)
196 3c1q_A General secretion pathw 31.1 54 0.0019 20.5 3.6 34 67-102 89-122 (123)
197 1t3q_C Quinoline 2-oxidoreduct 31.1 53 0.0018 24.4 4.0 10 2-11 26-35 (288)
198 3cg4_A Response regulator rece 31.1 79 0.0027 19.0 4.3 73 12-87 52-127 (142)
199 4hbl_A Transcriptional regulat 31.1 59 0.002 20.6 3.8 28 66-93 121-148 (149)
200 3l44_A Glutamate-1-semialdehyd 31.1 1.6E+02 0.0055 21.8 7.8 46 27-87 384-429 (434)
201 1e5e_A MGL, methionine gamma-l 30.8 1E+02 0.0034 23.1 5.6 65 12-87 309-394 (404)
202 3i5t_A Aminotransferase; pyrid 30.7 1.4E+02 0.0047 23.0 6.5 49 26-88 406-454 (476)
203 3n5m_A Adenosylmethionine-8-am 30.5 82 0.0028 23.7 5.1 53 27-86 398-450 (452)
204 3nyt_A Aminotransferase WBPE; 30.5 53 0.0018 23.8 3.9 62 13-82 282-358 (367)
205 1ohv_A 4-aminobutyrate aminotr 29.9 74 0.0025 24.6 4.8 61 12-86 409-469 (472)
206 3dxv_A Alpha-amino-epsilon-cap 29.8 49 0.0017 24.7 3.6 53 25-88 373-425 (439)
207 2epj_A Glutamate-1-semialdehyd 29.3 1E+02 0.0034 23.0 5.3 61 12-87 358-430 (434)
208 3cu4_A Cytochrome C family pro 28.7 25 0.00084 20.3 1.5 16 68-83 67-82 (85)
209 2kts_A Heat shock protein HSLJ 28.6 40 0.0014 21.4 2.6 36 54-89 55-90 (117)
210 1f1f_A Cytochrome C6; heme, pr 27.6 41 0.0014 19.2 2.4 16 69-84 69-84 (89)
211 3r8n_M 30S ribosomal protein S 27.5 91 0.0031 20.5 4.3 22 21-42 21-42 (114)
212 3l5l_A Xenobiotic reductase A; 27.5 41 0.0014 25.8 2.9 41 51-91 129-170 (363)
213 2cb1_A O-acetyl homoserine sul 27.4 1.7E+02 0.0058 21.7 6.3 27 12-43 328-354 (412)
214 2qma_A Diaminobutyrate-pyruvat 27.2 94 0.0032 23.9 4.9 75 2-86 415-494 (497)
215 3kru_A NADH:flavin oxidoreduct 26.6 39 0.0013 25.9 2.6 41 51-91 115-155 (343)
216 4e3q_A Pyruvate transaminase; 26.0 1.4E+02 0.0047 23.6 5.8 48 26-87 420-467 (473)
217 4e1o_A HDC, histidine decarbox 26.0 73 0.0025 24.6 4.1 76 2-86 401-476 (481)
218 2vqe_M 30S ribosomal protein S 25.8 30 0.001 23.4 1.6 42 20-83 21-62 (126)
219 3aoe_E Glutamate dehydrogenase 25.5 62 0.0021 25.8 3.7 72 17-95 316-392 (419)
220 3dmi_A Cytochrome C6; electron 25.4 27 0.00093 20.0 1.2 15 69-83 67-81 (88)
221 3gr7_A NADPH dehydrogenase; fl 25.2 43 0.0015 25.5 2.6 40 52-91 117-156 (340)
222 2gu0_A Nonstructural protein 2 24.8 43 0.0015 25.9 2.5 72 11-91 14-92 (312)
223 3nhm_A Response regulator; pro 24.5 92 0.0031 18.5 3.7 73 12-87 48-122 (133)
224 4fhz_A Phospholipase/carboxyle 24.5 77 0.0026 23.0 3.8 44 25-85 223-266 (285)
225 4atq_A 4-aminobutyrate transam 24.3 1.2E+02 0.004 23.9 5.0 50 26-86 404-453 (456)
226 2xzm_M RPS18E; ribosome, trans 24.3 1.1E+02 0.0038 21.2 4.4 40 22-83 36-75 (155)
227 1pu1_A Hypothetical protein MT 23.4 62 0.0021 21.0 2.7 24 64-87 4-27 (94)
228 2yxo_A Histidinol phosphatase; 23.3 43 0.0015 23.5 2.1 33 2-39 216-248 (267)
229 1a56_A C-551, ferricytochrome 23.1 52 0.0018 18.7 2.2 16 68-83 64-79 (81)
230 2yfq_A Padgh, NAD-GDH, NAD-spe 23.0 76 0.0026 25.2 3.7 63 27-95 328-395 (421)
231 2cy8_A D-phgat, D-phenylglycin 22.9 1.6E+02 0.0055 22.0 5.4 45 26-87 390-434 (453)
232 2zxy_A Cytochrome C552, cytoch 22.8 64 0.0022 18.1 2.6 16 67-82 69-84 (87)
233 3ouv_A Serine/threonine protei 22.8 47 0.0016 19.1 1.9 20 23-42 15-34 (71)
234 3e77_A Phosphoserine aminotran 22.7 2.1E+02 0.0073 21.8 6.2 48 28-86 326-373 (377)
235 1gdv_A Cytochrome C6; RED ALGA 22.7 67 0.0023 18.0 2.6 16 68-83 64-79 (85)
236 3fq8_A Glutamate-1-semialdehyd 22.7 2.3E+02 0.0079 20.8 7.7 46 26-86 380-425 (427)
237 2w84_A Peroxisomal membrane pr 22.7 30 0.001 21.3 1.0 22 19-40 42-63 (70)
238 3dp5_A OMCF, cytochrome C fami 22.4 38 0.0013 20.6 1.5 24 60-83 70-96 (99)
239 2tmg_A Protein (glutamate dehy 22.3 74 0.0025 25.3 3.5 68 21-95 316-388 (415)
240 1c53_A Cytochrome C553; electr 22.1 59 0.002 18.5 2.3 17 67-83 62-78 (79)
241 3ol3_A Putative uncharacterize 21.5 83 0.0029 20.7 3.1 24 60-83 35-58 (107)
242 3a9z_A Selenocysteine lyase; P 21.4 99 0.0034 22.8 3.9 28 55-86 399-426 (432)
243 1js3_A DDC;, DOPA decarboxylas 21.4 1.1E+02 0.0039 23.2 4.4 76 2-87 397-473 (486)
244 3j20_O 30S ribosomal protein S 21.3 1.1E+02 0.0036 21.2 3.8 40 22-83 29-68 (148)
245 4a7w_A Uridylate kinase; trans 21.3 63 0.0022 23.2 2.7 31 56-86 11-44 (240)
246 1c75_A Cytochrome C-553; heme, 21.0 65 0.0022 17.9 2.3 16 67-82 53-68 (71)
247 3nwy_A Uridylate kinase; allos 20.9 66 0.0023 24.0 2.8 33 56-88 54-88 (281)
248 3ph2_B Cytochrome C6; photosyn 20.8 70 0.0024 18.0 2.4 16 68-83 65-80 (86)
249 2d0s_A Cytochrome C, cytochrom 20.7 64 0.0022 18.2 2.2 15 68-82 62-76 (79)
250 3iz6_M 40S ribosomal protein S 20.6 1.3E+02 0.0043 20.9 4.1 39 22-82 34-72 (152)
251 3h4q_A Putative acetyltransfer 20.6 33 0.0011 21.8 1.0 27 58-84 13-39 (188)
252 1cch_A Cytochrome C551; electr 20.4 75 0.0026 17.8 2.5 16 68-83 65-80 (82)
253 1rm6_B 4-hydroxybenzoyl-COA re 20.3 1E+02 0.0034 23.5 3.8 10 2-11 26-35 (324)
254 2l4d_A SCO1/SENC family protei 20.2 65 0.0022 19.1 2.3 20 64-83 76-95 (110)
255 3hgj_A Chromate reductase; TIM 20.2 56 0.0019 24.8 2.4 40 52-91 125-164 (349)
256 1gks_A Cytochrome C551; haloph 20.2 61 0.0021 18.5 2.1 16 68-83 61-76 (78)
257 3u5c_S 40S ribosomal protein S 20.1 1.2E+02 0.0042 20.8 3.9 39 22-82 36-74 (146)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=243.04 Aligned_cols=95 Identities=61% Similarity=1.009 Sum_probs=91.9
Q ss_pred CCCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 1 ~G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
+||+|++|||||||+|||++++|++|++|+++|+++||++|||.+|+|++++.+|||||||+++|||||+|+||++||+|
T Consensus 354 ~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~ 433 (490)
T 3ou5_A 354 RGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDF 433 (490)
T ss_dssp TTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHH
T ss_pred CCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q 034072 81 FDAAVKLTVKIKSET 95 (104)
Q Consensus 81 i~~~l~~~~~~~~~~ 95 (104)
|+++|..+++++++.
T Consensus 434 I~~~l~~~~~~~~~~ 448 (490)
T 3ou5_A 434 IDEGVNIGLEVKSKT 448 (490)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHhhhhhhhhh
Confidence 999999988887655
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.88 E-value=2.4e-22 Score=164.01 Aligned_cols=95 Identities=61% Similarity=1.009 Sum_probs=90.0
Q ss_pred CCCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 1 MGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 1 ~G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
.|++++.++||||+++||+++.|++++++++.|+++||.+|+|.+|+|.+++.+++|||||+++|+||++++||++++++
T Consensus 354 ~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~ 433 (490)
T 2a7v_A 354 RGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDF 433 (490)
T ss_dssp TTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHH
T ss_pred cCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc
Q 034072 81 FDAAVKLTVKIKSET 95 (104)
Q Consensus 81 i~~~l~~~~~~~~~~ 95 (104)
|.+++.+++++|++.
T Consensus 434 i~~~l~~~~~~~~~~ 448 (490)
T 2a7v_A 434 IDEGVNIGLEVKSKT 448 (490)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHhhhhhhhhh
Confidence 999999988776654
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.63 E-value=1.2e-15 Score=122.13 Aligned_cols=91 Identities=62% Similarity=1.038 Sum_probs=83.3
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++.++|++|++++|++..|+++.++++.|+++||.+++|.+|++..++.+++||||++.+|+|||+++||+++++.|
T Consensus 345 g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l 424 (483)
T 1rv3_A 345 GYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFI 424 (483)
T ss_dssp TCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred CCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHH
Confidence 78888888999999999998899999999999999999999999998666678999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 034072 82 DAAVKLTVKIK 92 (104)
Q Consensus 82 ~~~l~~~~~~~ 92 (104)
.+++..+.+++
T Consensus 425 ~~~l~~~~~~~ 435 (483)
T 1rv3_A 425 HRGIELTVQIQ 435 (483)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHhccchh
Confidence 99998755443
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.48 E-value=1e-13 Score=108.97 Aligned_cols=88 Identities=44% Similarity=0.761 Sum_probs=71.5
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCC-CCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d-~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++.+++++|++++|+++.++++..+.+.|++.||.+++|.+|++ .++..++++|||++.+|+||++++||++++++
T Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~ 406 (447)
T 3h7f_A 327 GVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADI 406 (447)
T ss_dssp TCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHH
T ss_pred CeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHH
Confidence 78888888999999999999999999999999999999999999998 46677899999999999999999999999999
Q ss_pred HHHHHHHHH
Q 034072 81 FDAAVKLTV 89 (104)
Q Consensus 81 i~~~l~~~~ 89 (104)
|.++|....
T Consensus 407 l~~~l~~~~ 415 (447)
T 3h7f_A 407 IATALATGS 415 (447)
T ss_dssp HHHHHHSGG
T ss_pred HHHHHhccC
Confidence 999997653
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.16 E-value=2e-10 Score=87.25 Aligned_cols=86 Identities=41% Similarity=0.734 Sum_probs=78.4
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC-CCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~-~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++.+++++|++++++++.++++..+.+.|++.||.++....|+.. +++.++++|||++.+|+++++++|++++++.
T Consensus 302 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~ 381 (417)
T 3n0l_A 302 KFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNY 381 (417)
T ss_dssp TCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred CceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHH
Confidence 677777789999999999888999999999999999999999899884 5666789999999999999999999999999
Q ss_pred HHHHHHH
Q 034072 81 FDAAVKL 87 (104)
Q Consensus 81 i~~~l~~ 87 (104)
|.+++..
T Consensus 382 l~~~l~~ 388 (417)
T 3n0l_A 382 IADILDD 388 (417)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999965
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=98.96 E-value=3.8e-09 Score=80.07 Aligned_cols=86 Identities=43% Similarity=0.748 Sum_probs=76.9
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC-CCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~-~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++.+++++|++++++.+.+++...+.+.|++.||.+.....|++. .++.++++||+.+.++++++.++|++++++.
T Consensus 309 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~ 388 (420)
T 3gbx_A 309 GYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGW 388 (420)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred CCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHH
Confidence 677777778999999999887889999999999999999998888873 5566788999999999999999999999999
Q ss_pred HHHHHHH
Q 034072 81 FDAAVKL 87 (104)
Q Consensus 81 i~~~l~~ 87 (104)
|.++|..
T Consensus 389 l~~~l~~ 395 (420)
T 3gbx_A 389 MCDVLDN 395 (420)
T ss_dssp HHHHHHT
T ss_pred HHHHHhC
Confidence 9999865
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.82 E-value=3.7e-08 Score=74.71 Aligned_cols=87 Identities=44% Similarity=0.735 Sum_probs=76.3
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC-CCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~-~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++.+++++|++++++.+.++++..+.+.|++.||.+.....|+.. ++..++++|||.+.++++++.++|++++++.
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~ 389 (425)
T 3ecd_A 310 GVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRL 389 (425)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHH
T ss_pred CCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHH
Confidence 677776667899999999877889999999999999999988788863 4555678999999999999999999999999
Q ss_pred HHHHHHHH
Q 034072 81 FDAAVKLT 88 (104)
Q Consensus 81 i~~~l~~~ 88 (104)
|.+++...
T Consensus 390 l~~~l~~~ 397 (425)
T 3ecd_A 390 ILEVFEAL 397 (425)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99999765
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=97.91 E-value=6.4e-05 Score=56.54 Aligned_cols=87 Identities=47% Similarity=0.757 Sum_probs=68.4
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC-CCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~-~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++......+++++++...+++..++.+.|.+.||.+.....|... .+..++++||+.+..|++.++++|++++.+.
T Consensus 300 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~ 379 (405)
T 2vi8_A 300 GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAI 379 (405)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHH
T ss_pred CCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHH
Confidence 566654334688999998766778999999999999999876555331 2223467999999999999999999999999
Q ss_pred HHHHHHHH
Q 034072 81 FDAAVKLT 88 (104)
Q Consensus 81 i~~~l~~~ 88 (104)
|.+++...
T Consensus 380 l~~~~~~~ 387 (405)
T 2vi8_A 380 IGLVLKNV 387 (405)
T ss_dssp HHHHHTCT
T ss_pred HHHHHhcc
Confidence 99988653
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=97.87 E-value=0.00012 Score=55.10 Aligned_cols=86 Identities=49% Similarity=0.808 Sum_probs=68.2
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC-CCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~-~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++......+++++++...+++..++.+.|.+.||.+.....|... .+..++.+||+.+..|.++.+++|++++.+.
T Consensus 301 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~ 380 (407)
T 2dkj_A 301 GYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAEL 380 (407)
T ss_dssp TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHH
T ss_pred CceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHH
Confidence 566654345789999998766778999999999999999876554221 2223467999999999999999999999999
Q ss_pred HHHHHHH
Q 034072 81 FDAAVKL 87 (104)
Q Consensus 81 i~~~l~~ 87 (104)
|.+++..
T Consensus 381 l~~~~~~ 387 (407)
T 2dkj_A 381 IDRALLE 387 (407)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9998876
No 10
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=94.99 E-value=0.17 Score=37.03 Aligned_cols=60 Identities=13% Similarity=0.095 Sum_probs=45.8
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+..++++++.. +..++.+.|.+.||.+. ...++ ..+.+||+.. +++|++++.+.|.++++
T Consensus 291 ~~~~~~~~~~~---~~~~~~~~l~~~gi~v~-g~~~~-----~~~~iRis~~-------~~~~i~~~~~~l~~~l~ 350 (354)
T 3ly1_A 291 EGNFVFHQLVV---PLKDYQTHMADAGVLIG-RAFPP-----ADNWCRISLG-------TPQEMQWVADTMREFRK 350 (354)
T ss_dssp CSSEEEEECSS---CHHHHHHHHHHTTEECC-CCCTT-----CTTEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECCC---CHHHHHHHHHHCCEEEe-ecCCC-----CCCEEEEEcC-------CHHHHHHHHHHHHHHHH
Confidence 44568888764 78899999999999988 43332 2467999953 68999999988888775
No 11
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=94.87 E-value=0.12 Score=41.07 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=61.3
Q ss_pred CCeeeeCCCCCceeeEeccC-CCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~-~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++....+.+++.+.+.+ .+++..++.+.|.+.||.+.....|.... ...-+||++.. ..+++|++.+.+.
T Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~--~~~~lRisv~~----~~t~edid~li~~ 436 (502)
T 3hbx_A 363 RFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQ--HITVLRVVIRE----DFSRTLAERLVID 436 (502)
T ss_dssp CEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCT--TCEEEEEECCT----TCCHHHHHHHHHH
T ss_pred CEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccC--CceEEEEEeCC----CCCHHHHHHHHHH
Confidence 36676554678899988864 35788899999999999997766665421 12469998653 4567999999988
Q ss_pred HHHHHHHHHHH
Q 034072 81 FDAAVKLTVKI 91 (104)
Q Consensus 81 i~~~l~~~~~~ 91 (104)
|.+++....+.
T Consensus 437 L~~~l~~l~~~ 447 (502)
T 3hbx_A 437 IEKVMRELDEL 447 (502)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHHhC
Confidence 88888755443
No 12
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=94.73 E-value=0.11 Score=37.72 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=52.7
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++......+++++++.. +++..+..+.|.+.||.+....-| ...+.+||+....+ +++|++++.+.|
T Consensus 272 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~-----~~~~~iRi~~~~~~----~~~~i~~~~~~l 341 (352)
T 1iug_A 272 GLRPVPKRFSPAVAAFYLPE-GVPYARVKEAFAQRGAVIAGGQGP-----LKGKVFRLSLMGAY----DRYEALGVAGMF 341 (352)
T ss_dssp TCEESCSSBCTTCEEEECCT-TCCHHHHHHHHHTTTEECEECCGG-----GTTTEEEECCCSSC----CHHHHHHHHHHH
T ss_pred CCcccccccCCeEEEEEcCC-CCCHHHHHHHHHHCCEEEEeCCCc-----cCCCEEEEEccccC----CHHHHHHHHHHH
Confidence 45554321246788888743 678899999999999998754311 12467999976533 579999999998
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 342 ~~~~~ 346 (352)
T 1iug_A 342 REVLE 346 (352)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 13
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=94.64 E-value=0.15 Score=37.51 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=45.6
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
+..++++++... +..++.+.|.+.||.+.....++ .+.+||+.. +++|++++.+.|.+++
T Consensus 305 ~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~------~~~iRis~~-------~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 305 YTNFITYFFDEK--NSTDLSEKLLKKGIIIRNLKSYG------LNAIRITIG-------TSYENEKFFTEFDKIL 364 (365)
T ss_dssp SSSEEEEECSSS--CHHHHHHHHHTTTEECEECGGGT------CSEEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCC--CHHHHHHHHHHCCEEEEECccCC------CCEEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 344578888643 88899999999999987544333 467999964 7899999988887765
No 14
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=94.17 E-value=0.15 Score=38.48 Aligned_cols=67 Identities=16% Similarity=0.218 Sum_probs=49.0
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
...+++++++. ++++.+..+.|.+.||.+..-..++. ..++.+||+... .+++|++++.+.|.++++
T Consensus 369 ~~~~~~~~~~~--~~~~~~l~~~L~~~gi~v~~~~~~~~---~~~~~iRis~~~-----~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 369 ADGFYFTVGYK--GMDSSKLIEKFVRYGMCAITLKTTGS---KRNEAMRICTSL-----LPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp CSSSEEEEEET--TCCHHHHHHHHHHTTEECEESTTTTC---CCTTCEEEECSS-----SCGGGHHHHHHHHHHHHH
T ss_pred ceeEEEEEecC--CCCHHHHHHHHHHcCeEEeeccccCC---CCCCEEEEEEec-----CCHHHHHHHHHHHHHHHh
Confidence 45678899986 78999999999999999974332222 123679997542 378999999888877664
No 15
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=94.09 E-value=0.24 Score=36.37 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=47.4
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++. .+..++++++.. +..++.+.|.+.||.+.....++. ++.+||+.. +++|++++.+.|
T Consensus 297 g~~~~~--~~~~~~~~~~~~---~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~-------~~~~i~~~~~~l 359 (363)
T 3ffh_A 297 KVKLYP--ANGNFVLIDLGI---EAGTIFSYLEKNGYITRSGAALGF-----PTAVRITIG-------KEEDNSAVIALL 359 (363)
T ss_dssp TCEECC--CCSSEEEEECSS---CHHHHHHHHHHTTEECEETTTTTC-----TTEEEEECC-------CHHHHHHHHHHH
T ss_pred CceECC--CCCeEEEEECCC---CHHHHHHHHHHCCeEEEeCccCCC-----CCeEEEECC-------CHHHHHHHHHHH
Confidence 455542 334567888753 788999999999999886443332 467999964 789998888887
Q ss_pred HHH
Q 034072 82 DAA 84 (104)
Q Consensus 82 ~~~ 84 (104)
.++
T Consensus 360 ~~~ 362 (363)
T 3ffh_A 360 EKL 362 (363)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
No 16
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=93.99 E-value=0.32 Score=36.08 Aligned_cols=65 Identities=17% Similarity=0.176 Sum_probs=47.6
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++ ..+.+++++++. .+..++.+.|.+.||.+... . .++.+||+.. +++|++++.+.|
T Consensus 302 g~~~~--~~~~~~~~~~~~---~~~~~l~~~l~~~gi~v~~~----~----~~~~iRis~~-------~~~~i~~~~~~l 361 (369)
T 3cq5_A 302 GYAVV--PSESNFVFFGDF---SDQHAAWQAFLDRGVLIRDV----G----IAGHLRTTIG-------VPEENDAFLDAA 361 (369)
T ss_dssp TCEEE--CCSSSEEEEECC---SSHHHHHHHHHHTTEECBCC----S----CTTEEEEECC-------CHHHHHHHHHHH
T ss_pred CCEEC--CCCCeEEEEECC---CCHHHHHHHHHHCCEEEEEC----C----CCCeEEEEeC-------CHHHHHHHHHHH
Confidence 45554 245678888874 47888889999999998743 1 1357999975 678998888888
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 362 ~~~~~ 366 (369)
T 3cq5_A 362 AEIIK 366 (369)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77653
No 17
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=93.96 E-value=0.31 Score=36.79 Aligned_cols=70 Identities=7% Similarity=0.005 Sum_probs=46.8
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhhc------CceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEAV------HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~~------gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~ 83 (104)
....++++++. +.+..+..+.|.+. ||.+......+.......+.+||+.. .+++|++++.+.|.+
T Consensus 326 ~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~------~~~e~i~~~~~~l~~ 397 (409)
T 2gb3_A 326 SGAFYITAELP--VEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV------LEKDLLSRAIDVLME 397 (409)
T ss_dssp SBSSEEEEECS--SSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC------SCHHHHHHHHHHHHH
T ss_pred CeeEEEEEEeC--CCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC------CCHHHHHHHHHHHHH
Confidence 34566777875 56788887777654 99987532211111112467999865 578999999999988
Q ss_pred HHHH
Q 034072 84 AVKL 87 (104)
Q Consensus 84 ~l~~ 87 (104)
++..
T Consensus 398 ~l~~ 401 (409)
T 2gb3_A 398 GLKM 401 (409)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 18
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=93.59 E-value=0.25 Score=36.26 Aligned_cols=68 Identities=15% Similarity=0.110 Sum_probs=47.2
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..+++++++.. ..+..+.|.+.||.+....-+ ....+.+||+....+.+..+++|++++.+.|.+++.
T Consensus 315 ~~~~~~~~~~~----~~~~~~~l~~~gi~v~~g~~~----~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 315 AHGLTAVYVAD----PPDVIAFLKSHGVVIAGGIHK----DIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp CSSCEEEECSC----HHHHHHHHHHTTEECBCCCCT----TTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred CCceEEEecCC----HHHHHHHHHHCCeEEeCCCCc----ccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 47888888742 778888888999998643211 112457999943334445688999999988877653
No 19
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=93.50 E-value=0.67 Score=34.59 Aligned_cols=79 Identities=13% Similarity=0.017 Sum_probs=53.0
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++. .....++++++.. +++..+..+.|.+.||.+......+.. ....+.+||+.... +++|+++..+.|
T Consensus 315 g~~~~~-~~~g~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~~-~~~~~~iRis~~~~-----~~~~i~~~~~~l 386 (397)
T 2zyj_A 315 EVRYTR-PKGGMFVWMELPK-GLSAEGLFRRALEENVAFVPGGPFFAN-GGGENTLRLSYATL-----DREGIAEGVRRL 386 (397)
T ss_dssp TSEECC-CSBSSEEEEECST-TCCHHHHHHHHHHTTEEEEESGGGCTT-SCCTTEEEEECSSS-----CHHHHHHHHHHH
T ss_pred CeEEcc-CCccEEEEEEcCC-CCCHHHHHHHHHHCCCEEechHHhcCC-CCCCCeEEEEcCCC-----CHHHHHHHHHHH
Confidence 455542 2335678888753 678888888888889999753321111 11245799996542 789999999999
Q ss_pred HHHHHHH
Q 034072 82 DAAVKLT 88 (104)
Q Consensus 82 ~~~l~~~ 88 (104)
.+++...
T Consensus 387 ~~~l~~~ 393 (397)
T 2zyj_A 387 GRALKGL 393 (397)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888643
No 20
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=93.44 E-value=0.27 Score=36.63 Aligned_cols=71 Identities=13% Similarity=0.069 Sum_probs=47.3
Q ss_pred CCCCCceeeEeccCCCCCHHHHHHH-HhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 8 GGTENHLVLVNLKNKGIDGSRVEKV-LEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 8 ggTd~Hlvlvdl~~~gi~g~~a~~~-Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
....+.++++++...+.++.+..+. +++.||.+..-...+.. ...+.+||+... .++|+++..+.|.++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~--~~~~~iRis~~~------~~~~i~~~l~~l~~~~~ 380 (391)
T 3h14_A 309 PPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPE--RGAGTLRFSYAR------ATADIEEGLDRLEAFMQ 380 (391)
T ss_dssp CCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTT--TGGGEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred CCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCC--CCCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 3445677888987667788887666 56679998753322221 124579998553 56888888777777665
No 21
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=93.38 E-value=0.53 Score=35.67 Aligned_cols=71 Identities=17% Similarity=0.096 Sum_probs=51.3
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCC--CCCCC---CCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV--PGDVS---AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~l--P~d~~---~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
...++++++...+++..+..+.|.+.||.+..-.. ++... +...+.|||+... +++|+++..+.|.+++
T Consensus 364 ~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~------~~e~i~~~l~~l~~~~ 437 (444)
T 3if2_A 364 GAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA------DEQTLIDGIKVIGEVV 437 (444)
T ss_dssp BSSEEEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS------CHHHHHHHHHHHHHHH
T ss_pred ccEEEEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC------CHHHHHHHHHHHHHHH
Confidence 45677888876678999999999999999885432 22111 1123579999753 7899999998888877
Q ss_pred HH
Q 034072 86 KL 87 (104)
Q Consensus 86 ~~ 87 (104)
..
T Consensus 438 ~~ 439 (444)
T 3if2_A 438 RE 439 (444)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 22
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=93.27 E-value=0.47 Score=35.43 Aligned_cols=72 Identities=11% Similarity=0.052 Sum_probs=51.5
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCC--CCCCCCC--CCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV--PGDVSAM--VPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~l--P~d~~~~--~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
....++|+++...+++..+..+.|.+.||.+..-.. |+...+. ..+.+||+.. .+++|+++..+.|.+++
T Consensus 337 ~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~------~~~~~i~~~~~~l~~~l 410 (417)
T 3g7q_A 337 EGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYV------PEPDKIEAGVKILAEEI 410 (417)
T ss_dssp CBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESC------SCHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEec------CCHHHHHHHHHHHHHHH
Confidence 345678899876678999999999999999875322 2111100 0357999964 27899999999998887
Q ss_pred HH
Q 034072 86 KL 87 (104)
Q Consensus 86 ~~ 87 (104)
..
T Consensus 411 ~~ 412 (417)
T 3g7q_A 411 ER 412 (417)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 23
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=93.12 E-value=0.3 Score=35.60 Aligned_cols=64 Identities=16% Similarity=0.247 Sum_probs=48.2
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
...+++++++...+++..+..+.|.+.||.+.. +. .+.+||.... ..+++|++++.+.|.+++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~----~~-----~~~iRl~~~~----~~~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 281 VKTNMVILRTDNLKVNAHGFIEALRNSGVLANA----VS-----DTEIRLVTHK----DVSRNDIEEALNIFEKLFR 344 (347)
T ss_dssp CCSSEEEEECTTSSSCHHHHHHHHHHHTEECEE----EE-----TTEEEEECCT----TSCHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEEcccccCCHHHHHHHHHHCCCEEec----CC-----CCeEEEEeCC----CCCHHHHHHHHHHHHHHHH
Confidence 456788898854467889999999999999873 21 2469996432 3689999999999888764
No 24
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=93.09 E-value=0.23 Score=36.77 Aligned_cols=76 Identities=18% Similarity=0.165 Sum_probs=51.9
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++ ..+.+++++++.. +.+..+..+.|.+.||.+.....|... ...+.+||+... ..+++|++++.+.|
T Consensus 319 g~~~~--~~~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~~~~~~~~--~~~~~iRi~~~~----~~~~~~i~~~~~~l 389 (399)
T 3tqx_A 319 GFQLV--PGNHPIIPVMLGD-AQLATNMADHLLQEGIYVVGFSYPVVP--MGKARIRVQMSA----VHTQQQLDRAIEAF 389 (399)
T ss_dssp TCCBC--CCSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTTSC--TTCEEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCCcC--CCCCCEEEEEeCC-HHHHHHHHHHHHHCCCEEeeeCCCCCC--CCCceEEEEeec----CCCHHHHHHHHHHH
Confidence 44554 3566788888643 335677888888899999854333221 123579998654 45789999999999
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.++++
T Consensus 390 ~~~~~ 394 (399)
T 3tqx_A 390 GQVGK 394 (399)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88775
No 25
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=93.02 E-value=0.34 Score=35.69 Aligned_cols=75 Identities=12% Similarity=0.068 Sum_probs=51.6
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ...+..+++++...+++..+..+.| ++.||.+......+.. ..+.+||+.. .+++|+++..+.
T Consensus 312 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~iRis~~------~~~~~i~~~l~~ 381 (391)
T 3dzz_A 312 EVKVLD-SNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGN---GHEFVRINLA------CPKELVIDGMQR 381 (391)
T ss_dssp TSEECC-CCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTT---GGGEEEEECC------SCHHHHHHHHHH
T ss_pred CcEEec-cCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEec------CCHHHHHHHHHH
Confidence 455543 2345556789877778999999988 6999998753211111 1357999865 367888888888
Q ss_pred HHHHHH
Q 034072 81 FDAAVK 86 (104)
Q Consensus 81 i~~~l~ 86 (104)
|.+++.
T Consensus 382 l~~~l~ 387 (391)
T 3dzz_A 382 LKQGVL 387 (391)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887775
No 26
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=92.98 E-value=0.12 Score=38.40 Aligned_cols=76 Identities=12% Similarity=0.240 Sum_probs=50.8
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ...+.++++++...+.+..+..+.|. +.||.+.....++.. ..+.+||+... +++|+.+..+.
T Consensus 309 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~iRi~~~~------~~~~i~~~l~~ 378 (389)
T 1gd9_A 309 GLPTVK-PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKA---GEGYVRISYAT------AYEKLEEAMDR 378 (389)
T ss_dssp TCCCCC-CCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGG---GTTBEEEECCS------CHHHHHHHHHH
T ss_pred CCeecC-CCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCC---CCCeEEEEecC------CHHHHHHHHHH
Confidence 344432 22355677887655678888888886 999998754322211 13579999652 78899888888
Q ss_pred HHHHHHH
Q 034072 81 FDAAVKL 87 (104)
Q Consensus 81 i~~~l~~ 87 (104)
|.+++..
T Consensus 379 l~~~~~~ 385 (389)
T 1gd9_A 379 MERVLKE 385 (389)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8887754
No 27
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=92.92 E-value=0.18 Score=36.97 Aligned_cols=78 Identities=13% Similarity=0.154 Sum_probs=52.6
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCC--CCCC-C-------C----CCCCeeeEcchhHhhcCCCHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV--PGDV-S-------A----MVPGGIRMGTPALTSRGFVEEDFAKV 77 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~l--P~d~-~-------~----~~~sglRlGT~a~T~RG~~e~dm~~I 77 (104)
.+++++.+. +++..+..+.|.+.||.+..-.. |... + . ...+.+||+.... .+++|++++
T Consensus 289 ~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~----~~~~~i~~~ 362 (382)
T 4eb5_A 289 PNNVNVRFS--YIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRY----NTDEDVDRL 362 (382)
T ss_dssp TTEEEEEET--TSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTT----CCHHHHHHH
T ss_pred CCEEEEEeC--CcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCC----CCHHHHHHH
Confidence 557777764 57889999999999999875321 1100 0 0 0135799996432 368999999
Q ss_pred HHHHHHHHHHHHHHhhhc
Q 034072 78 AYFFDAAVKLTVKIKSET 95 (104)
Q Consensus 78 a~~i~~~l~~~~~~~~~~ 95 (104)
.+.|.+++....+++.++
T Consensus 363 ~~~l~~~~~~~~~~~~~~ 380 (382)
T 4eb5_A 363 LEVLPGVIERLRSMSPLY 380 (382)
T ss_dssp HHHHHHHHHHHHHTCTTC
T ss_pred HHHHHHHHHHHHHhhhhh
Confidence 999999987666554333
No 28
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=92.92 E-value=0.31 Score=36.23 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=49.0
Q ss_pred CCceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
...++++++...+++..+..+.| ++.||.+.....++. ...+.+||+.. .+++|+++..+.|.++++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRis~~------~~~~~i~~~~~~l~~~~~ 403 (407)
T 3nra_A 336 AGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSP---HTADSVRLNFS------QDHEAAVAAARRIVTLVE 403 (407)
T ss_dssp BSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCT---TCTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCC---CCCCEEEEEeC------CCHHHHHHHHHHHHHHHH
Confidence 34677888876678888888887 568999886443331 12467999965 278999999888888775
No 29
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=92.77 E-value=0.18 Score=37.67 Aligned_cols=76 Identities=18% Similarity=0.223 Sum_probs=52.7
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++ ....+++++++.. +.+..+..+.|.+.||.+.....|+.+. ..+.+||+.... .+++|++++.+.|
T Consensus 320 g~~~~--~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~~~~~~~~--~~~~iRi~~~~~----~~~~~i~~~~~~l 390 (401)
T 1fc4_A 320 GFTLA--GADHAIIPVMLGD-AVVAQKFARELQKEGIYVTGFFYPVVPK--GQARIRTQMSAA----HTPEQITRAVEAF 390 (401)
T ss_dssp TCCBC--CSSSSEEEEEEEC-HHHHHHHHHHHHHTTEECCEECTTSSCT--TCEEEEEECCTT----CCHHHHHHHHHHH
T ss_pred CCccc--CCCCCEEEEEcCC-hHHHHHHHHHHHHCCcEEeeecCCCCCC--CCceEEEEeCCC----CCHHHHHHHHHHH
Confidence 45554 3577889998742 3456778888888899998655443221 134699996533 4689999999998
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 391 ~~~~~ 395 (401)
T 1fc4_A 391 TRIGK 395 (401)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88765
No 30
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=92.77 E-value=0.55 Score=33.76 Aligned_cols=76 Identities=18% Similarity=0.226 Sum_probs=51.1
Q ss_pred CCeeeeCC-CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHH-HHHH
Q 034072 2 GYELVSGG-TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA-KVAY 79 (104)
Q Consensus 2 G~~vv~gg-Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~-~Ia~ 79 (104)
|++++... .-++++++++ +.+++..+..+.|.+.||.+....-|. ....+||+..... +++|+. ++.+
T Consensus 275 g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gi~v~~g~~~~-----~~~~iRi~~~~~~----~~~~~~~~~~~ 344 (353)
T 2yrr_A 275 GFRPYPKASPLPTVLVVRP-PEGVDADRLVRALYAEGVAVAGGIGPT-----RGQVLRLGLMGEG----ARREAYQAFLK 344 (353)
T ss_dssp TCEESCSSSBCTTEEEEEC-CTTCCHHHHHHHHHHTTEECEECCGGG-----TTTCEEEECSGGG----SCHHHHHHHHH
T ss_pred CCccccCccCCCeEEEEEC-CCCCCHHHHHHHHHHCCEEEeCCcccc-----CCCeEEEecCccC----CHHHHHHHHHH
Confidence 45554321 2467777876 346789999999999999987543221 1356999974433 468888 8888
Q ss_pred HHHHHHHH
Q 034072 80 FFDAAVKL 87 (104)
Q Consensus 80 ~i~~~l~~ 87 (104)
.|.+++..
T Consensus 345 ~l~~~l~~ 352 (353)
T 2yrr_A 345 ALDRALAL 352 (353)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhh
Confidence 88777653
No 31
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=92.71 E-value=0.57 Score=35.53 Aligned_cols=79 Identities=19% Similarity=0.302 Sum_probs=52.8
Q ss_pred ceeeEeccC--CCCCHHHHHHHHhhcCceeccCCCCC-CC-CCCC-------C-------CeeeEcchhHhhcCCCHHHH
Q 034072 13 HLVLVNLKN--KGIDGSRVEKVLEAVHIAANKNTVPG-DV-SAMV-------P-------GGIRMGTPALTSRGFVEEDF 74 (104)
Q Consensus 13 Hlvlvdl~~--~gi~g~~a~~~Le~~gI~vnkn~lP~-d~-~~~~-------~-------sglRlGT~a~T~RG~~e~dm 74 (104)
|++.+++.+ .+++..++.+.|.+.||.+....-|. .. +.+. + ..|||+. ...++++|+
T Consensus 297 ~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~----~~~~t~e~i 372 (424)
T 2po3_A 297 QYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPT----GTAIGDDDI 372 (424)
T ss_dssp CCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECC----STTCCHHHH
T ss_pred EEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeC----CCCCCHHHH
Confidence 666677643 26788999999999999997632211 00 0010 1 1266663 245789999
Q ss_pred HHHHHHHHHHHHHHHHHhhhc
Q 034072 75 AKVAYFFDAAVKLTVKIKSET 95 (104)
Q Consensus 75 ~~Ia~~i~~~l~~~~~~~~~~ 95 (104)
+++.+.|.+++....+..+.+
T Consensus 373 ~~~~~~L~~~~~~~~~~~~~~ 393 (424)
T 2po3_A 373 RRVADLLRLCATRGRELTARH 393 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHhhhh
Confidence 999999999998877765544
No 32
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=92.67 E-value=0.25 Score=37.20 Aligned_cols=76 Identities=17% Similarity=0.234 Sum_probs=51.8
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|+++. ...+++++++.... +..+..+.|.+.||.+.....|..+ ...+.|||+.+. ..+++|++++.+.|
T Consensus 328 g~~~~---~~~~~~~~~~~~~~-~~~~~~~~L~~~Gv~v~~~~~~~~~--~~~~~iRi~~~~----~~t~e~i~~~~~~l 397 (409)
T 3kki_A 328 GLTIR---SESQIIGLETGDER-NTEKVRDYLESNGVFGSVFCRPATS--KNKNIIRLSLNS----DVNDEQIAKIIEVC 397 (409)
T ss_dssp TCCCC---CSSSEEEEEEESHH-HHHHHHHHHHHTTEECEEECTTSSC--TTCEEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCccC---CCCCEEEEEeCCHH-HHHHHHHHHHHCCceEeeeCCCCcC--CCCcEEEEEccC----CCCHHHHHHHHHHH
Confidence 44554 36678888875322 4556777777779998765544332 123579999765 45789999999999
Q ss_pred HHHHHH
Q 034072 82 DAAVKL 87 (104)
Q Consensus 82 ~~~l~~ 87 (104)
.+++..
T Consensus 398 ~~~l~~ 403 (409)
T 3kki_A 398 SDAVNY 403 (409)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 888763
No 33
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=92.59 E-value=0.69 Score=33.89 Aligned_cols=74 Identities=9% Similarity=0.056 Sum_probs=49.9
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ...+..+++++...+++..+..+.|. +.||.+......+.. ..+.+||+.. .+++|+++..+.
T Consensus 308 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~iRi~~~------~~~~~i~~~l~~ 377 (383)
T 3kax_A 308 TLSVMK-PEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLG---GEEHIGINIG------CPRSVLEEILNR 377 (383)
T ss_dssp TCEECC-CSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTT---CTTEEEEECS------SCHHHHHHHHHH
T ss_pred CceEec-CCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCC---CCCeEEEEEc------CCHHHHHHHHHH
Confidence 455542 33345566998777789999888885 899998753221111 1467999855 267888888888
Q ss_pred HHHHH
Q 034072 81 FDAAV 85 (104)
Q Consensus 81 i~~~l 85 (104)
|.+++
T Consensus 378 l~~~l 382 (383)
T 3kax_A 378 LRHTF 382 (383)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77765
No 34
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=92.25 E-value=0.76 Score=33.51 Aligned_cols=64 Identities=17% Similarity=0.097 Sum_probs=47.7
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
.+++++.+.. .+..+..+.|.+.||.+.. +...+. ..+||+.... .+++|++++.+.|.+++..
T Consensus 299 ~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~----g~~~~~--~~iRi~~~~~----~~~e~i~~~~~~l~~~l~~ 362 (384)
T 3zrp_A 299 NTVTGVILKV--ADPQKVLAGTVNEGVEFAP----GVHPAF--KYFRIGHMGW----VTPNDAIIAISVIERTLRK 362 (384)
T ss_dssp SSEEEEECSS--SCHHHHHHHHHTTTCCCEE----CCCTTC--CEEEEECCSS----CCHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEECCC--CCHHHHHHHHHHCCEEEec----CCCCCc--CEEEEecccc----CCHHHHHHHHHHHHHHHHH
Confidence 5677777654 6889999999999999873 221111 6799996543 4689999999999998864
No 35
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=92.21 E-value=0.29 Score=38.11 Aligned_cols=71 Identities=8% Similarity=0.111 Sum_probs=49.5
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++.. ....++.++ ..++++.++.+.|.+.||.++.... ++++|++.. . .+++|++++.+.|
T Consensus 367 g~~~~~~-~~~~~v~~~--~~~~~~~~l~~~L~~~Gi~v~~~~~--------~~~~ri~~~-~----~t~e~i~~~~~~L 430 (497)
T 3mc6_A 367 DLDIMGN-PRYSVISFS--SKTLNIHELSDRLSKKGWHFNALQK--------PVALHMAFT-R----LSAHVVDEICDIL 430 (497)
T ss_dssp TCEECSC-CCSSEEEEE--CTTTTHHHHHHHHHTTTCBCEECCS--------SCCEEEECC-T----TTTCTHHHHHHHH
T ss_pred CEEEecC-CCeeEEEEe--CCCCCHHHHHHHHHhCCEEEecCCC--------CCeEEEEEe-C----CCHHHHHHHHHHH
Confidence 6666643 233344444 4578999999999999999875432 246899876 2 3678888888888
Q ss_pred HHHHHHH
Q 034072 82 DAAVKLT 88 (104)
Q Consensus 82 ~~~l~~~ 88 (104)
.+++...
T Consensus 431 ~~~l~~~ 437 (497)
T 3mc6_A 431 RTTVQEL 437 (497)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877644
No 36
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=91.96 E-value=0.96 Score=33.89 Aligned_cols=65 Identities=15% Similarity=0.189 Sum_probs=46.8
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
++++++++. .+++..++.+.|.+.||.+... .. ....+.|||+.... .+++|++++.+.|.+++.
T Consensus 332 ~~~~~~~~~-~~~~~~~l~~~L~~~gI~v~~g---~~--~~~~~~iRis~~~~----~t~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 332 QVVGTIDFV-DDVDAGTVAKILRANGIVDTEP---YR--KLGRNQLRVAMFPA----VEPDDVSALTECVDWVVE 396 (398)
T ss_dssp SSEEEEEEC-TTSCHHHHHHHHHHTTCBCCSC---CT--TTCSSEEEEECCTT----SCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECC-CCCCHHHHHHHHHHCCcEEecC---cc--cCCCCEEEEEecCC----CCHHHHHHHHHHHHHHHH
Confidence 348888874 3778999999998889998642 11 11135799997653 358999999988887764
No 37
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=91.90 E-value=0.49 Score=34.35 Aligned_cols=73 Identities=14% Similarity=0.174 Sum_probs=48.3
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCC--C------C------CCCeeeEcchhHhhcCCCHHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVS--A------M------VPGGIRMGTPALTSRGFVEEDFAKVA 78 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~--~------~------~~sglRlGT~a~T~RG~~e~dm~~Ia 78 (104)
|++.+.+ .+.+..++.+.|.+.||.+..-..+.... + + ..+.|||+.... .+++|++++.
T Consensus 290 ~~~~~~~--~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~----~t~e~i~~~~ 363 (382)
T 4hvk_A 290 NNVNVRF--SYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRY----NTDEDVDRLL 363 (382)
T ss_dssp TEEEEEE--TTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTT----CCHHHHHHHH
T ss_pred CEEEEEE--CCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCC----CCHHHHHHHH
Confidence 5566655 36789999999999999987532111110 0 0 036799997543 4679999999
Q ss_pred HHHHHHHHHHHHH
Q 034072 79 YFFDAAVKLTVKI 91 (104)
Q Consensus 79 ~~i~~~l~~~~~~ 91 (104)
+.|.+++....+.
T Consensus 364 ~~l~~~~~~~~~~ 376 (382)
T 4hvk_A 364 EVLPGVIERLRSM 376 (382)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh
Confidence 9999988755443
No 38
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=91.84 E-value=0.9 Score=33.37 Aligned_cols=74 Identities=15% Similarity=0.163 Sum_probs=49.1
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhc-CceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~-gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ...+.++++++...+++..+..+.|.+. ||.+......+.. ..+.+||+.. .+++|+++..+.
T Consensus 316 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~iRis~~------~~~~~i~~~l~~ 385 (391)
T 4dq6_A 316 KLKVRK-PEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIG---GSGYQRINLA------CPRSMLEEALIR 385 (391)
T ss_dssp TSEECC-CSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTT---CTTEEEEECC------SCHHHHHHHHHH
T ss_pred CCEecC-CCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCC---CCCeEEEEEc------CCHHHHHHHHHH
Confidence 444442 3335556689876677898888888776 9998753211111 2367999965 367888888888
Q ss_pred HHHHH
Q 034072 81 FDAAV 85 (104)
Q Consensus 81 i~~~l 85 (104)
|.+++
T Consensus 386 l~~~l 390 (391)
T 4dq6_A 386 IKNAI 390 (391)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87765
No 39
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=91.64 E-value=0.3 Score=36.51 Aligned_cols=76 Identities=12% Similarity=0.155 Sum_probs=49.1
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. .+.+++++++.. +.+..++.+.| ++.||.+.....|+.+. ..+.+||+.... .+++|++++.+.
T Consensus 322 g~~~~~--~~~~~~~~~~~~-~~~~~~~~~~L~~~~gi~v~~~~~~~~~~--~~~~iRis~~~~----~t~~~i~~~~~~ 392 (401)
T 2bwn_A 322 GMPIID--HGSHIVPVVIGD-PVHTKAVSDMLLSDYGVYVQPINFPTVPR--GTERLRFTPSPV----HDLKQIDGLVHA 392 (401)
T ss_dssp TCCBCC--CSSSCEEEECCC-HHHHHHHHHHHHHHHCEECCEECTTTSCT--TCCEEEECCCTT----SCHHHHHHHHHH
T ss_pred CCcccC--CCCCeEEEEeCC-hHHHHHHHHHHHhcCCEEEeecCCCCCCC--CCceEEEEeeCC----CCHHHHHHHHHH
Confidence 445542 345788898743 34566777777 68999997543332211 124699997643 478999999888
Q ss_pred HHHHHH
Q 034072 81 FDAAVK 86 (104)
Q Consensus 81 i~~~l~ 86 (104)
|.+++.
T Consensus 393 l~~~~~ 398 (401)
T 2bwn_A 393 MDLLWA 398 (401)
T ss_dssp HHHHC-
T ss_pred HHHHHH
Confidence 877653
No 40
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=91.41 E-value=1.6 Score=32.78 Aligned_cols=72 Identities=13% Similarity=0.105 Sum_probs=49.8
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCC-CCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 88 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d-~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~ 88 (104)
....++++++.. + +..++.+.|.+.||.+....--+. ......+.+||+... .+++|+++..+.|.+++...
T Consensus 343 ~~g~~~~~~~~~-~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~l~~~ 415 (423)
T 3ez1_A 343 KGGYFISLDTAE-P-VADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTR-----PPVEEVRTAMQVVAACIRLA 415 (423)
T ss_dssp SBSSCEEEEESS-S-CHHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEECCC-C-cHHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCC-----CCHHHHHHHHHHHHHHHHHH
Confidence 345577888754 3 788999999999999976221111 111124679999632 26899999999999988754
No 41
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=91.35 E-value=0.37 Score=35.38 Aligned_cols=75 Identities=20% Similarity=0.245 Sum_probs=49.2
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++. ...+.++++++...+++...+++.+++.||.+......+.. ..+.+||+.. .+++|+++..+.|
T Consensus 300 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~---~~~~~Ris~~------~~~e~i~~~l~~l 369 (377)
T 3fdb_A 300 GAKITP-MQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGED---GTGFCRLNFA------TSREVLEEAIDRM 369 (377)
T ss_dssp TCEECC-CSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGG---GTTEEEEECC------SCHHHHHHHHHHH
T ss_pred CceEec-CCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCC---CCCEEEEEeC------CCHHHHHHHHHHH
Confidence 455542 23344557998776677666778888889998753221111 2467999855 2678888888888
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 370 ~~~l~ 374 (377)
T 3fdb_A 370 AKAVS 374 (377)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77664
No 42
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=91.23 E-value=0.56 Score=33.90 Aligned_cols=65 Identities=11% Similarity=0.029 Sum_probs=46.9
Q ss_pred CceeeEeccC-CCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~-~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+++++++.+ .+++..+..+.|.+.||.+.....+ ....+||+.... .+++|++++.+.|.+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~------~~~~iRi~~~~~----~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 298 PIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVS------QSDCFRIGNIGE----VYAADITALLTAIRTAMY 363 (366)
T ss_dssp SSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCS------SSCEEEEECCSS----CCHHHHHHHHHHHHHHCT
T ss_pred ceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCC------CCCEEEEecCCC----CCHHHHHHHHHHHHHHHH
Confidence 4578888753 1678899999999999998643221 246799997653 358999999888877653
No 43
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=91.17 E-value=0.82 Score=33.29 Aligned_cols=68 Identities=13% Similarity=0.099 Sum_probs=47.9
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++.. ...+++++++. +..++.+.|.+.||.+..... ++.+||+... ..+++|++++.+.|
T Consensus 329 g~~~~~~-~~~~~~~~~~~----~~~~~~~~l~~~gi~v~~~~~--------~~~~Ri~~~~----~~~~e~i~~~~~~l 391 (397)
T 3f9t_A 329 NFKPVIE-PILNIVAIEDE----DYKEVCKKLRDRGIYVSVCNC--------VKALRIVVMP----HIKREHIDNFIEIL 391 (397)
T ss_dssp TCCBSSC-CSSSEEEEECT----THHHHHHHHHHTTCBCEECSS--------SSEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCEEEcC-CCccEEEEEeC----CHHHHHHHHHhCCeEEeccCC--------CCEEEEEEcC----CCCHHHHHHHHHHH
Confidence 4444433 45778888764 377888888888999875422 3679998763 34689999999888
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 392 ~~~l~ 396 (397)
T 3f9t_A 392 NSIKR 396 (397)
T ss_dssp HHHC-
T ss_pred HHhhC
Confidence 87653
No 44
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=90.88 E-value=0.5 Score=36.08 Aligned_cols=84 Identities=14% Similarity=0.126 Sum_probs=54.3
Q ss_pred CCeeeeCCCCCceeeEe-------ccCCCCCHHHHHHHH-hhcCceeccC-CC-----C--CCCCCCCCCeeeEcchhHh
Q 034072 2 GYELVSGGTENHLVLVN-------LKNKGIDGSRVEKVL-EAVHIAANKN-TV-----P--GDVSAMVPGGIRMGTPALT 65 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvd-------l~~~gi~g~~a~~~L-e~~gI~vnkn-~l-----P--~d~~~~~~sglRlGT~a~T 65 (104)
|++++ .....+.+|++ +...+++..+..+.| ++.||.+... .. | +...+...+.|||..+..
T Consensus 343 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~- 420 (467)
T 1ax4_A 343 GIPIQ-YPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARR- 420 (467)
T ss_dssp TCCBC-SSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTT-
T ss_pred CCCcc-cCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccc-
Confidence 44544 33456788888 433345677888888 9999998752 11 1 110111135799987642
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHH
Q 034072 66 SRGFVEEDFAKVAYFFDAAVKLTV 89 (104)
Q Consensus 66 ~RG~~e~dm~~Ia~~i~~~l~~~~ 89 (104)
..+++|++++.+.|.+++....
T Consensus 421 --~~t~e~i~~~~~~l~~~~~~~~ 442 (467)
T 1ax4_A 421 --VYTNDHMDYIADALIGLKEKFA 442 (467)
T ss_dssp --SSCHHHHHHHHHHHHTTHHHHT
T ss_pred --cCCHHHHHHHHHHHHHHHHhhh
Confidence 3679999999999998887543
No 45
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=90.84 E-value=1.2 Score=32.48 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=49.5
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
..+++++++. .+++..+..+.|.+.||.+....-|. ....+||+... ..+++|++++.+.|.+++..
T Consensus 312 ~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~~~~-----~~~~iRi~~~~----~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 312 SPTITAVLTP-PGIKGDEVYEAMRKRGFELAKGYGSV-----KEKTFRIGHMG----YMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp CSSEEEEECC-TTCCHHHHHHHHHHTTEECEECCGGG-----TTTEEEEECCS----SCCHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcC-CCCCHHHHHHHHHHCCeEEecCcccc-----CCCEEEEECCC----CCCHHHHHHHHHHHHHHHHH
Confidence 4678888874 36688888888888899987543221 23579999764 24789999999999888763
No 46
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=90.67 E-value=1.6 Score=32.32 Aligned_cols=71 Identities=15% Similarity=0.125 Sum_probs=49.1
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++. ...+.++|+++.. .+..++.+.|.+.||.+.....++. ++.+||+.. .+++|+++..+.|
T Consensus 324 g~~~~~-~~~~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~------~~~e~i~~~l~~l 389 (398)
T 3ele_A 324 GYHCFK-PDGAFYMFVKALE--DDSNAFCEKAKEEDVLIVAADGFGC-----PGWVRISYC------VDREMIKHSMPAF 389 (398)
T ss_dssp TCCEEC-CSBSSEEEEECSS--SCHHHHHHHHHTTTEECEESGGGTC-----TTEEEEECC------SCHHHHHHHHHHH
T ss_pred CCeecC-CCeeEEEEEEcCC--CCHHHHHHHHHHCCEEEeCccccCC-----CCeEEEEec------CCHHHHHHHHHHH
Confidence 344443 2334457888743 3788888999999999975433221 357999852 4789999988888
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.++++
T Consensus 390 ~~~l~ 394 (398)
T 3ele_A 390 EKIYK 394 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88775
No 47
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=90.66 E-value=0.86 Score=35.59 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=52.8
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++.+++..|.+++++ +.+++..++.+.|.+.||.+.....|. ...+.+||..... .+++|++++.+.|
T Consensus 364 g~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~L~~~Gi~~~~~~~~~----~~~~~lRis~~~~----~t~e~id~~~~~L 434 (474)
T 1wyu_B 364 GYRVPYDGPSMHEFVAQP-PEGFRALDLAKGLLELGFHPPTVYFPL----IVKEALMVEPTET----EAKETLEAFAEAM 434 (474)
T ss_dssp TCBCSSCSSCCSCEEEBC-STTCCHHHHHHHHHHTTCCCCEESCST----TSTTCEEECCCTT----SCHHHHHHHHHHH
T ss_pred CcEecCCCCcceEEEEEc-CCCCCHHHHHHHHHHCCcccccccccc----ccCCEEEEEeecC----CCHHHHHHHHHHH
Confidence 566644555567678887 557789999999988899863222221 1245799997543 3679999999888
Q ss_pred HHHHHH
Q 034072 82 DAAVKL 87 (104)
Q Consensus 82 ~~~l~~ 87 (104)
.+++..
T Consensus 435 ~~~~~~ 440 (474)
T 1wyu_B 435 GALLKK 440 (474)
T ss_dssp HHHHTS
T ss_pred HHHHHh
Confidence 877653
No 48
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=90.65 E-value=0.42 Score=35.17 Aligned_cols=63 Identities=16% Similarity=0.122 Sum_probs=43.7
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+.+++.+.. +.+..+..+.|++.||.+- |+... .+.|||+....+ +++|++++.+.|.+++.
T Consensus 297 ~~~~~~~~~~-~~~~~~~~~~L~~~gi~~~----~g~~~---~~~iRis~~~~~----~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 297 DMNITFRLAS-EELEKEFVKASEQEGFVGL----KGHRS---VGGLRASIYNAV----PYESCEALVQFMEHFKR 359 (362)
T ss_dssp SSEEEEECSC-HHHHHHHHHHHHHTTEESC----BCCTT---TCSEEEECCTTS----CHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCC-cchHHHHHHHHHHCCCeec----cCCCC---CCEEEEECCCCC----CHHHHHHHHHHHHHHHH
Confidence 3556676532 4567788889999999663 43321 357999975433 48999999999887654
No 49
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=90.52 E-value=0.37 Score=40.88 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=49.9
Q ss_pred CCeeeeCCC---CCceeeEeccCCC---------CCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCC
Q 034072 2 GYELVSGGT---ENHLVLVNLKNKG---------IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGF 69 (104)
Q Consensus 2 G~~vv~ggT---d~Hlvlvdl~~~g---------i~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~ 69 (104)
||+.+..++ |.+.+.+++.+.| +++.++.+.|++.||.+.+. + ...+|+-+ +-|-
T Consensus 520 ~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~----~-----~~~v~~~~----~~g~ 586 (755)
T 2vyc_A 520 GFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT----T-----DFQIMFLF----SMGV 586 (755)
T ss_dssp CCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE----C-----SSEEEEEC----CTTC
T ss_pred cccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec----C-----CCeEEEEE----CCCC
Confidence 566666554 8888999887644 45599999999999999875 1 24566654 3455
Q ss_pred CHHHHHHHHHHHHHHH
Q 034072 70 VEEDFAKVAYFFDAAV 85 (104)
Q Consensus 70 ~e~dm~~Ia~~i~~~l 85 (104)
+++|+..+.+.+.++.
T Consensus 587 t~~~~~~l~~al~~~~ 602 (755)
T 2vyc_A 587 TRGKWGTLVNTLCSFK 602 (755)
T ss_dssp CTTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 6777777776666554
No 50
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=90.47 E-value=1.8 Score=32.82 Aligned_cols=71 Identities=10% Similarity=0.013 Sum_probs=47.1
Q ss_pred CCCceeeEeccCCCCCHHH-HHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSR-VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~-a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
....++|+++... .+..+ +.+.|.+.||.+..-...+.........+||+... .+++|+++..+.|.+++.
T Consensus 351 ~~g~~~~~~~~~~-~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-----~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 351 AAGMFLWIKVKGI-NDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-----ASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp SBSSEEEEEETTC-SCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-----CCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeCCC-CCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-----CCHHHHHHHHHHHHHHHH
Confidence 4456788998543 35445 68889999999875332221111113579999542 488999999998888775
No 51
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=90.30 E-value=0.42 Score=36.27 Aligned_cols=75 Identities=9% Similarity=0.059 Sum_probs=49.3
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. +..+.++|+++...+++..+..+.| +++||.++.-...+.. ..+.+||+.. ..++|+++..+.
T Consensus 345 ~i~~~~-~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~---~~~~iRi~~~------~~~~~i~~~l~~ 414 (421)
T 3l8a_A 345 KIKVME-PEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKE---GKYFARLNVA------TPKNTVQEALSR 414 (421)
T ss_dssp SCEEEC-CSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGG---GTTEEEEECC------SCHHHHHHHHHH
T ss_pred CceEeC-CCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCC---CCCEEEEEec------CCHHHHHHHHHH
Confidence 344443 3345566799887677888877777 6789999853322211 1357999855 367888888888
Q ss_pred HHHHHH
Q 034072 81 FDAAVK 86 (104)
Q Consensus 81 i~~~l~ 86 (104)
|.+++.
T Consensus 415 l~~~l~ 420 (421)
T 3l8a_A 415 IISVFG 420 (421)
T ss_dssp HHHHC-
T ss_pred HHHHHh
Confidence 877653
No 52
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=90.01 E-value=2.2 Score=31.23 Aligned_cols=61 Identities=16% Similarity=0.249 Sum_probs=43.3
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
...++++++. +.+..++.+.|.+.||.+....-| ...+.+||+.. .++|++++.+.+.++-
T Consensus 292 ~~~~~~~~~~--~~~~~~l~~~l~~~gi~v~~~~~~-----~~~~~iRis~~-------~~~e~~~l~~al~~~~ 352 (360)
T 3hdo_A 292 QGNYLFATPP--DRDGKRVYDGLYARKVLVRHFSDP-----LLAHGMRISIG-------TREEMEQTLAALKEIG 352 (360)
T ss_dssp SSSEEEEECT--TCCHHHHHHHHHHTTEECBCCCST-----TTTTSEEEECC-------CHHHHHHHHHHHHHHH
T ss_pred CccEEEEECC--CCCHHHHHHHHHHCCEEEEECCCC-----CCCCEEEEEcC-------CHHHHHHHHHHHHHHh
Confidence 4456777754 568999999999999999753221 12367999954 7888888877765543
No 53
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=89.94 E-value=0.8 Score=33.92 Aligned_cols=70 Identities=16% Similarity=0.176 Sum_probs=48.1
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC--CCC-CCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV--SAM-VPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~--~~~-~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..+++++.+. +.+..++.+.|.+.||.+.....+..+ ..+ ....+||+.... .+++|++++.+.|.++++
T Consensus 339 ~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~~~----~~~~~i~~~~~~l~~~~~ 411 (420)
T 1t3i_A 339 RAALASFNVA--GLHASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLYFY----NTKEEIDLFLQSLQATIR 411 (420)
T ss_dssp BCSEEEEEET--TBCHHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEC--CCCHHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecCCC----CCHHHHHHHHHHHHHHHH
Confidence 3678888764 467888999999999998754221100 001 145799996532 478999999999888765
No 54
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=89.87 E-value=0.73 Score=33.83 Aligned_cols=61 Identities=15% Similarity=0.198 Sum_probs=44.1
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
...++++++. +..++.+.|.+.||.+....-.+ +...+.+||+.. +++|++++.+.|.+++
T Consensus 305 ~~~~~~~~~~----~~~~l~~~l~~~gi~v~~~~~~~---~~~~~~iRis~~-------~~~~i~~~~~~l~~~l 365 (367)
T 3euc_A 305 AANFLLARVP----DAAQTFDRLLARKVLIKNVSKMH---PLLANCLRVTVS-------TPEENAQFLEAFAASL 365 (367)
T ss_dssp SSSEEEEECS----CHHHHHHHHHTTTEECEECGGGC---GGGTTEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred CCeEEEEECC----CHHHHHHHHHHCCeEEEECCccC---CCCCCEEEEecC-------CHHHHHHHHHHHHHHh
Confidence 3456778875 78889999999999987432211 112467999953 7899999988887765
No 55
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=89.83 E-value=0.7 Score=34.39 Aligned_cols=76 Identities=17% Similarity=0.156 Sum_probs=51.2
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++. .+.+++++++. .+.+..+..+.|.+.||.+.....|..+ ...+.+||+... ..+++|++++.+.|
T Consensus 315 g~~~~~--~~g~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~~--~~~~~iRis~~~----~~~~e~i~~~~~~l 385 (398)
T 3a2b_A 315 GFDLGA--TESPILPIFIR-SNEKTFWVTKMLQDDGVFVNPVVSPAVP--AEESLIRFSLMA----THTYDQIDEAIEKM 385 (398)
T ss_dssp TCCBCS--CCSSEEEEECC-CHHHHHHHHHHHHHTTEECEEECTTTSC--GGGCEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCCcCC--CCCCEEEEEcC-CHHHHHHHHHHHHHCCcEEEeeCCCCCC--CCCceEEEEEeC----CCCHHHHHHHHHHH
Confidence 455543 24578888874 3445677777777779998765443321 123579999764 25789999999998
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 386 ~~~l~ 390 (398)
T 3a2b_A 386 VKVFK 390 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88775
No 56
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=89.74 E-value=0.94 Score=34.50 Aligned_cols=78 Identities=18% Similarity=0.147 Sum_probs=52.4
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++......+++++++.. +.+..+..+.|.+.||.+.....|+.+. ..+.|||+... ..+++|++++.+.|
T Consensus 336 g~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~Gi~v~~~~~~~~~~--~~~~lRi~~~~----~~t~e~i~~~~~~l 408 (427)
T 2w8t_A 336 GFRLGTETCDSAIVAVMLED-QEQAAMMWQALLDGGLYVNMARPPATPA--GTFLLRCSICA----EHTPAQIQTVLGMF 408 (427)
T ss_dssp TCEESCSSCCSSEEEEEESS-HHHHHHHHHHHHHTTEECEEECTTTSCT--TCEEEEEECCT----TCCHHHHHHHHHHH
T ss_pred CCcccCCCCCCCEEEEEECC-HHHHHHHHHHHHHCCeEEeeeCCCCCCC--CCeEEEEEeCC----CCCHHHHHHHHHHH
Confidence 45554221256788888742 2346677777877899998765554321 13579998654 35789999999999
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 409 ~~~l~ 413 (427)
T 2w8t_A 409 QAAGR 413 (427)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88875
No 57
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=89.74 E-value=1.8 Score=33.21 Aligned_cols=82 Identities=16% Similarity=0.058 Sum_probs=55.5
Q ss_pred CCeeeeCC---CCCceeeEeccCC---CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHH
Q 034072 2 GYELVSGG---TENHLVLVNLKNK---GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA 75 (104)
Q Consensus 2 G~~vv~gg---Td~Hlvlvdl~~~---gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~ 75 (104)
|++++..+ ...+++.+.+.+. +++..++.+.|.+.||.+.....|.... ....+||.....+ +++|++
T Consensus 348 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~--~~~~lRis~~~~~----t~e~id 421 (452)
T 2dgk_A 348 PYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEAT--DIVVMRIMCRRGF----EMDFAE 421 (452)
T ss_dssp SEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCT--TCEEEEEECCTTC----CHHHHH
T ss_pred CeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccC--CeEEEEEEecCCC----CHHHHH
Confidence 46666533 4567787776542 3577889999999999876544454321 1246999976544 469999
Q ss_pred HHHHHHHHHHHHHH
Q 034072 76 KVAYFFDAAVKLTV 89 (104)
Q Consensus 76 ~Ia~~i~~~l~~~~ 89 (104)
.+.+.|.+++....
T Consensus 422 ~li~~l~~~~~~~~ 435 (452)
T 2dgk_A 422 LLLEDYKASLKYLS 435 (452)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99988888776543
No 58
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=89.71 E-value=0.91 Score=33.56 Aligned_cols=73 Identities=11% Similarity=0.074 Sum_probs=48.2
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ...+.++++++...+.+..+..+.|. +.||.+..-...+. +..+||+.. .+++|+++..+.
T Consensus 312 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~-----~~~iRis~~------~~~~~i~~~~~~ 379 (388)
T 1j32_A 312 GLECPK-PDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGA-----DDCIRLSYA------TDLDTIKRGMER 379 (388)
T ss_dssp TCBCCC-CCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTC-----TTBEEEECC------SCHHHHHHHHHH
T ss_pred CCcccC-CCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCC-----CCcEEEEec------CCHHHHHHHHHH
Confidence 455442 23355677777544678888887775 48999875322111 357999963 478999888888
Q ss_pred HHHHHH
Q 034072 81 FDAAVK 86 (104)
Q Consensus 81 i~~~l~ 86 (104)
|.++++
T Consensus 380 l~~~l~ 385 (388)
T 1j32_A 380 LEKFLH 385 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877764
No 59
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=89.57 E-value=1 Score=34.14 Aligned_cols=78 Identities=12% Similarity=0.038 Sum_probs=50.5
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++. .....++++++.. +++..+..+.|.+.||.+......+.. ....+.+||+.... +++|+++..+.|
T Consensus 340 g~~~~~-~~~g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~g~~f~~~-~~~~~~iRis~~~~-----~~e~i~~~l~~l 411 (425)
T 1vp4_A 340 GVKWVK-SEGGLFIWLTLPE-GFDTWEMFEYAKRKKVFYVPGRVFKVY-DEPSPSMRLSFCLP-----PDEKIVEGIKRL 411 (425)
T ss_dssp TCEECC-CSBSSEEEEECCT-TCCTTTTHHHHHHHTEECEEGGGGCTT-CCCCSEEEEECSSS-----CHHHHHHHHHHH
T ss_pred ceEEec-CCccEEEEEEcCC-CCCHHHHHHHHHHCCCEEECchhhcCC-CCCCCeEEEEeCCC-----CHHHHHHHHHHH
Confidence 455543 2345678898753 556677777777779998754321111 11235799986432 789999999999
Q ss_pred HHHHHH
Q 034072 82 DAAVKL 87 (104)
Q Consensus 82 ~~~l~~ 87 (104)
.+++..
T Consensus 412 ~~~l~~ 417 (425)
T 1vp4_A 412 REVVLE 417 (425)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888753
No 60
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=89.42 E-value=2.6 Score=31.82 Aligned_cols=72 Identities=14% Similarity=0.098 Sum_probs=49.3
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCC-CCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 88 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d-~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~ 88 (104)
.....+++++.. + +..++.+.|.+.||.+....--+. ......+.+||+... .+++|+++..+.|.+++...
T Consensus 348 ~~g~~~~~~~~~-~-~~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~-----~~~~~i~~~~~~l~~~l~~~ 420 (427)
T 3ppl_A 348 AGGYFISLDVVP-G-TASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSL-----PPVEELEVAMDGVATCVLLA 420 (427)
T ss_dssp SBSSCEEEECST-T-CHHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSS-----SCHHHHHHHHHHHHHHHHHH
T ss_pred CccEEEEEECCc-c-hHHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCC-----CCHHHHHHHHHHHHHHHHHH
Confidence 346678898854 3 788889999999999875211111 011124689999632 26799999999998888754
No 61
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=88.74 E-value=1.9 Score=32.02 Aligned_cols=69 Identities=14% Similarity=0.056 Sum_probs=46.7
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhc-CceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~-gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
...++++++.+ +++..+..+.|.+. ||.+......... ....+.+||+.... +++|+++..+.|.+++.
T Consensus 333 ~~~~~~~~~~~-~~~~~~l~~~l~~~~gi~v~~g~~~~~~-~~~~~~iRis~~~~-----~~~~i~~~~~~l~~~l~ 402 (407)
T 2zc0_A 333 AGMFVMFFLPE-GADGISFANELMEREGVVVVPGKPFYTD-ESGKNAIRLNFSRP-----SKEEIPIGIKKLAKLYK 402 (407)
T ss_dssp BSSEEEEECST-TCCHHHHHHHHHHHTCEECBCSGGGCSS-SCCTTEEEEECSSS-----CTTHHHHHHHHHHHHHH
T ss_pred CcEEEEEEcCC-CCCHHHHHHHHHHhCCeEEECchhccCC-CCCCCeEEEEeCCC-----CHHHHHHHHHHHHHHHH
Confidence 34678888743 67888887777666 9998753321111 11246799986432 68999999999888775
No 62
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=88.68 E-value=0.61 Score=34.48 Aligned_cols=74 Identities=8% Similarity=0.056 Sum_probs=49.3
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|+++.. ...+++++++. .+.+..+..+.|.+.||.+.....|+.+ ...+.+||+... ..+++|++++.+.|
T Consensus 310 g~~~~~--~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~v~~~~~~~~~--~~~~~~Ri~~~~----~~~~~~i~~~~~~l 380 (384)
T 1bs0_A 310 PFTLAD--SCSAIQPLIVG-DNSRALQLAEKLRQQGCWVTAIRPPTVP--AGTARLRLTLTA----AHEMQDIDRLLEVL 380 (384)
T ss_dssp SCEECS--CCSSBCCEEEE-SHHHHHHHHHHHHHTTEECCEECTTSSC--TTCEEECCBCCT----TCCHHHHHHHHHHH
T ss_pred CCcccC--CCCCEEEEEeC-CHHHHHHHHHHHHHCCcEEEeecCCCCC--CCCceEEEEEcC----CCCHHHHHHHHHHH
Confidence 445542 45678888874 2346677888888889999876555422 113579999653 34789998888777
Q ss_pred HHH
Q 034072 82 DAA 84 (104)
Q Consensus 82 ~~~ 84 (104)
.++
T Consensus 381 ~~~ 383 (384)
T 1bs0_A 381 HGN 383 (384)
T ss_dssp HHH
T ss_pred Hhh
Confidence 653
No 63
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=88.65 E-value=2 Score=31.46 Aligned_cols=79 Identities=14% Similarity=0.061 Sum_probs=51.9
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC---CCCCCCeeeEcchhHhhcCCCHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV---SAMVPGGIRMGTPALTSRGFVEEDFAKVA 78 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~---~~~~~sglRlGT~a~T~RG~~e~dm~~Ia 78 (104)
|++++....+..++++++. +++..++.+.|.+.||.+..-.....+ ....+..+||+.... .+++|++++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~~~----~t~~~i~~~~ 395 (406)
T 1kmj_A 322 DLTLYGPQNRLGVIAFNLG--KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMY----NTHEEVDRLV 395 (406)
T ss_dssp TEEEESCTTCCSEEEEEET--TCCHHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECCTT----CCHHHHHHHH
T ss_pred CeEEecCCCcCCEEEEEEC--CCCHHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEeecC----CCHHHHHHHH
Confidence 4555432225678888764 568888999999999998642210000 000135799997643 4789999999
Q ss_pred HHHHHHHH
Q 034072 79 YFFDAAVK 86 (104)
Q Consensus 79 ~~i~~~l~ 86 (104)
+.|.++++
T Consensus 396 ~~l~~~~~ 403 (406)
T 1kmj_A 396 TGLQRIHR 403 (406)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988765
No 64
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=88.56 E-value=1.5 Score=32.33 Aligned_cols=74 Identities=12% Similarity=0.042 Sum_probs=47.5
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++.. ....++++++.+. + +.+.|++.||.+.....+... +...+.+||+... +++|+++..+.|
T Consensus 298 g~~~~~~-~~~~~~~~~~~~~--~---~~~~l~~~gi~v~~g~~~~~~-~~~~~~iRi~~~~------~~~~i~~~~~~l 364 (381)
T 1v2d_A 298 GLRVYVP-EGTYFLMAELPGW--D---AFRLVEEARVALIPASAFYLE-DPPKDLFRFAFCK------TEEELHLALERL 364 (381)
T ss_dssp TCCEECC-SBSSEEEEECTTC--C---HHHHHHHTCEECEEGGGGCSS-SCCTTEEEEECCS------CHHHHHHHHHHH
T ss_pred CCEecCC-CcceEEEEecChH--h---HHHHHHhCCEEEecchHhCCC-CCCCCEEEEEeCC------CHHHHHHHHHHH
Confidence 4555532 2345778887543 3 888899999998754322211 1124679999653 789999999998
Q ss_pred HHHHHHH
Q 034072 82 DAAVKLT 88 (104)
Q Consensus 82 ~~~l~~~ 88 (104)
.+++...
T Consensus 365 ~~~l~~~ 371 (381)
T 1v2d_A 365 GRVVNSP 371 (381)
T ss_dssp HHHC---
T ss_pred HHHHhhc
Confidence 8877643
No 65
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=88.44 E-value=1.5 Score=31.62 Aligned_cols=68 Identities=21% Similarity=0.239 Sum_probs=45.3
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++. ...++++++++. .+..+.|.+.||.+.....+ .+.+||... ...+++|++++.+.|
T Consensus 285 g~~~~~-~~~~~~~~~~~~------~~~~~~l~~~gi~v~~g~~~-------~~~iRi~~~----~~~~~~~i~~~~~~l 346 (356)
T 1v72_A 285 GVEVLG-GTEANILFCRLD------SAMIDALLKAGFGFYHDRWG-------PNVVRFVTS----FATTAEDVDHLLNQV 346 (356)
T ss_dssp TEEEES-CCCSSEEEEEEC------HHHHHHHHHTTCBCBCSSSS-------TTEEEEECC----TTCCHHHHHHHHHHH
T ss_pred CcEEcc-CCCccEEEEEcC------HHHHHHHHhcCeEEeccccC-------CCeEEEEec----CCCCHHHHHHHHHHH
Confidence 455543 345677888863 26777788889998743211 357999843 235789999999888
Q ss_pred HHHHHH
Q 034072 82 DAAVKL 87 (104)
Q Consensus 82 ~~~l~~ 87 (104)
.+++..
T Consensus 347 ~~~l~~ 352 (356)
T 1v72_A 347 RLAADR 352 (356)
T ss_dssp HHTC--
T ss_pred HHHHHh
Confidence 877653
No 66
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=88.42 E-value=2.5 Score=30.72 Aligned_cols=65 Identities=11% Similarity=0.146 Sum_probs=44.2
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhh-cCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~-~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+.+++++++.. + +..+..+.|.+ .||.+..-...+ ....+.+||+.. .++|++++.+.+.+++.
T Consensus 275 ~~~~~~~~~~~~-~-~~~~l~~~L~~~~gi~v~~g~~f~---~~~~~~iRis~~-------~~~~~~~l~~al~~~~~ 340 (350)
T 3fkd_A 275 SGTTFFLLRLKK-G-TAAELKKYMLEEYNMLIRDASNFR---GLDESYVRITTQ-------RPAQNQLFIKALETFLE 340 (350)
T ss_dssp CSSSEEEEEESS-S-CHHHHHHHHHHTTCEECEECTTST---TCCTTEEEEECC-------CHHHHHHHHHHHHHHHT
T ss_pred CCCcEEEEECCC-C-CHHHHHHHHHHHCCEEEEeCccCC---CCCCCEEEEEcC-------CHHHHHHHHHHHHHHHH
Confidence 455677788754 3 78888888888 999987543221 122467999853 67888888877766543
No 67
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=88.35 E-value=0.45 Score=34.81 Aligned_cols=71 Identities=17% Similarity=0.060 Sum_probs=48.3
Q ss_pred CceeeEeccCCCC-CHHHHHHHHhhcCceeccCCCCCCCC-C---------C------CCCeeeEcchhHhhcCCCHHHH
Q 034072 12 NHLVLVNLKNKGI-DGSRVEKVLEAVHIAANKNTVPGDVS-A---------M------VPGGIRMGTPALTSRGFVEEDF 74 (104)
Q Consensus 12 ~Hlvlvdl~~~gi-~g~~a~~~Le~~gI~vnkn~lP~d~~-~---------~------~~sglRlGT~a~T~RG~~e~dm 74 (104)
.|++++.+...++ +..+..+.|.+.||.+....-|.... . . ..+.|||+... ..+++|+
T Consensus 283 ~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~----~~t~~~i 358 (375)
T 2fnu_A 283 NHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHA----NLNLESV 358 (375)
T ss_dssp CSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCT----TCCHHHH
T ss_pred eEEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCC----CCCHHHH
Confidence 4667787765455 78889999999999998432232110 0 0 01469998553 3578999
Q ss_pred HHHHHHHHHHHH
Q 034072 75 AKVAYFFDAAVK 86 (104)
Q Consensus 75 ~~Ia~~i~~~l~ 86 (104)
+++.+.|.+++.
T Consensus 359 ~~~~~~l~~~~~ 370 (375)
T 2fnu_A 359 QNIAHSVLKTFE 370 (375)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999988775
No 68
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=88.18 E-value=1.5 Score=32.05 Aligned_cols=73 Identities=22% Similarity=0.168 Sum_probs=47.3
Q ss_pred CeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhc-CceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 3 YELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 3 ~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~-gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
+++.......+++.+. +.+.+..+..+.|.+. ||.+....-+ .....|||+.... .+++|++++.+.|
T Consensus 299 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~gi~v~~g~~~-----~~~~~lRis~~~~----~t~e~i~~~~~~l 367 (376)
T 3f0h_A 299 FELVSESPANGVTSVH--PTTANAYDIFLKLKDEYGIWICPNGGE-----MKDTIFRVGHIGA----LTHEDNTTLVNAF 367 (376)
T ss_dssp EEECCSSBBTTEEEEE--ESSSCHHHHHHHHHHHSSEECEECCGG-----GTTTCEEEECCSS----CCHHHHHHHHHHH
T ss_pred CccCccccCceEEEEe--CCCCCHHHHHHHHHHhCCEEEecCccc-----cCCCEEEEecCCC----CCHHHHHHHHHHH
Confidence 3444333334444443 4567888888888776 9998744111 1235699997543 5689999999999
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.++++
T Consensus 368 ~~~l~ 372 (376)
T 3f0h_A 368 KDLQK 372 (376)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88775
No 69
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=87.94 E-value=0.81 Score=33.30 Aligned_cols=63 Identities=13% Similarity=-0.005 Sum_probs=42.7
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
++++++++.+ +.+..+..+.|.+.||.+. |+.. ..+.|||+.... .+++|++++.+.|.++++
T Consensus 296 ~~~~~~~~~~-~~~~~~~~~~l~~~gi~~~----~~~~---~~~~iRis~~~~----~~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 296 LMNVTFNLRN-EELNQQFLAKAKEQGFVGL----NGHR---SVGGCRASIYNA----VPIDACIALRELMIQFKE 358 (360)
T ss_dssp SSEEEEECSS-HHHHHHHHHHHHHTTEESC----BCCT---TTCSEEEECCTT----SCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcCC-CccHHHHHHHHHHCCeeee----cCCC---CCCeEEEEecCC----CCHHHHHHHHHHHHHHHh
Confidence 4588888743 2234556666777999873 3322 135799997643 357999999999888765
No 70
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=87.50 E-value=5.5 Score=30.04 Aligned_cols=70 Identities=19% Similarity=0.165 Sum_probs=48.6
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCC--CCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNT--VPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~--lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
....++|+++.. + +..++.+.|++.||.+.... .+.... ...+.+||+... .+++|+++..+.|.+++..
T Consensus 346 ~~g~~~~~~~~~-~-~~~~~~~~l~~~gV~v~~~g~~f~~~~~-~~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 346 TGGYFISVDVVP-G-TASRVVELAKEAGIALTGAGSSFPLHND-PNNENIRLAPSL-----PPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp SBSSCEEEEEST-T-CHHHHHHHHHHTTEECCCTTTTSGGGCC-TTSCEEEECCSS-----SCHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEEECCC-C-CHHHHHHHHHHCCeEEEcCccccCCCCC-CCCCeEEEecCC-----CCHHHHHHHHHHHHHHHHH
Confidence 345678889854 2 67888899999999997621 221110 113579999643 5689999999998888754
No 71
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=87.35 E-value=2.3 Score=31.27 Aligned_cols=73 Identities=14% Similarity=0.141 Sum_probs=49.7
Q ss_pred CCceeeEeccC--CCCCHHHHHHHHhhcCceeccCCCCC----------CCCCC------CCCeeeEcchhHhhcCCCHH
Q 034072 11 ENHLVLVNLKN--KGIDGSRVEKVLEAVHIAANKNTVPG----------DVSAM------VPGGIRMGTPALTSRGFVEE 72 (104)
Q Consensus 11 d~Hlvlvdl~~--~gi~g~~a~~~Le~~gI~vnkn~lP~----------d~~~~------~~sglRlGT~a~T~RG~~e~ 72 (104)
..|++++.+.+ .+.+..++.+.|.+.||.+..-..|. +...+ ..+.|||+... ..+++
T Consensus 295 ~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~----~~t~~ 370 (393)
T 1mdo_A 295 AWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFP----DMTES 370 (393)
T ss_dssp CCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCT----TCCHH
T ss_pred eeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCCC----CCCHH
Confidence 45788888753 15688999999999999997644331 00011 12369998654 45789
Q ss_pred HHHHHHHHHHHHHHH
Q 034072 73 DFAKVAYFFDAAVKL 87 (104)
Q Consensus 73 dm~~Ia~~i~~~l~~ 87 (104)
|++.+.+.|.+++..
T Consensus 371 ~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 371 DFDRVITALHQIAGQ 385 (393)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999998877653
No 72
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=87.10 E-value=4.2 Score=29.40 Aligned_cols=64 Identities=17% Similarity=0.153 Sum_probs=44.1
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+..++++++.. .+..+..+.|.+.||.+..-...+ ....+.+||+.. .++|++++.+.+.++++
T Consensus 296 ~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~g~~~~---~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 296 HANFVLCRLEN--ISGEKLYDSLLKEDIVIRRCCNFI---GLDDSFVRFAIK-------DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp SSSEEEEEESS--SCHHHHHHHHHTTTEECEECTTST---TCCTTEEEEECC-------CHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcCC--CCHHHHHHHHHHCCeEEeeCccCC---CCCCCEEEEEcC-------CHHHHHHHHHHHHHHHh
Confidence 34567788764 688888888888899987532211 112457999964 67888888887766543
No 73
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=86.71 E-value=1.4 Score=33.03 Aligned_cols=67 Identities=10% Similarity=0.104 Sum_probs=45.6
Q ss_pred CceeeEeccCCCC---CHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGI---DGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 12 ~Hlvlvdl~~~gi---~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
++++++++. .++ +..+..+.| ++.||.+.....+... ..+.+||+... +++++.+..+.|.+++..
T Consensus 328 g~~~~~~~~-~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~---~~~~iRis~~~------~~~~l~~~l~~l~~~l~~ 397 (412)
T 2x5d_A 328 SMYVWAKIP-EPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDY---GDDHVRFALIE------NRDRLRQAVRGIKAMFRA 397 (412)
T ss_dssp SSEEEEECC-TTTGGGCHHHHHHHHHHHHCEECEEGGGGCGG---GTTEEEEECCS------CHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEcC-CccCCCCHHHHHHHHHHHCCEEEeCchhhCCC---CCCeEEEEecC------CHHHHHHHHHHHHHHHHh
Confidence 567888873 345 667777766 6689998754322111 13579999763 678999888888888764
Q ss_pred H
Q 034072 88 T 88 (104)
Q Consensus 88 ~ 88 (104)
.
T Consensus 398 ~ 398 (412)
T 2x5d_A 398 D 398 (412)
T ss_dssp T
T ss_pred c
Confidence 3
No 74
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=86.29 E-value=2.6 Score=30.95 Aligned_cols=67 Identities=10% Similarity=0.013 Sum_probs=46.9
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhc-CceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~-gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..+++++.+. .+++..+..+.|.+. ||.+.....|. ..+.+||+.... ..+++|++++.+.|.+++.
T Consensus 302 ~~~~~~~~~~-~~~~~~~l~~~L~~~~gi~v~~g~~~~-----~~~~lRi~~~~~---~~~~~~i~~~~~~l~~~~~ 369 (392)
T 2z9v_A 302 SPTTTAVRTP-DGVDEKALRQAARARYGVVFSSGRGET-----LGKLTRIGHMGP---TAQPIYAIAALTALGGAMN 369 (392)
T ss_dssp CTTEEEEECC-TTCCHHHHHHHHHHHHCEECEECCGGG-----TTTEEEEECCGG---GCSHHHHHHHHHHHHHHHH
T ss_pred CCceEEEECC-CCCCHHHHHHHHHhcCCEEEecCCCCC-----CCCeEEEeCccc---ccCHHHHHHHHHHHHHHHH
Confidence 4677888763 467888888888776 99986543221 246799994221 1467999999999988875
No 75
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=86.16 E-value=1.1 Score=33.46 Aligned_cols=63 Identities=21% Similarity=0.177 Sum_probs=42.4
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
+..+|+++...+++..+..+.|.+.||.+..-...+. .+.+||+.. .+++++++..+.|.+++
T Consensus 320 ~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~-----~~~iRis~~------~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 320 AFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAA-----FGHVRLSYA------TSEENLRKALERFARVL 382 (385)
T ss_dssp TTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTC-----TTEEEEECC------SCHHHHHHHHHHGGGGC
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCC-----CCeEEEEec------CCHHHHHHHHHHHHHHH
Confidence 4456778865678888888888899999864321111 357999953 56777766666655544
No 76
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=86.12 E-value=2.2 Score=32.13 Aligned_cols=59 Identities=15% Similarity=0.177 Sum_probs=44.8
Q ss_pred CceeeEeccCCCCCHHHHHHHHhh-cCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~-~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+.++++++. +++..+..+.|.+ .||.+.. + ..+.+||+... .+++|+++..+.|.+++.
T Consensus 368 g~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~----g-----~~~~iRis~~~-----~~~e~i~~~~~~l~~~l~ 427 (430)
T 2x5f_A 368 GYFMAIKVH--DVDPEALRKHLIDKYSIGVIA----L-----NATDIRIAFSC-----VEKDDIPHVFDSIAKAID 427 (430)
T ss_dssp SSEEEEEES--SSCHHHHHHHHHHHHCEECEE----C-----SSSEEEEEGGG-----SCGGGHHHHHHHHHHHHH
T ss_pred eEEEEeCCC--CCCHHHHHHHHHHhCCEEEec----C-----CCCeEEEEEec-----CCHHHHHHHHHHHHHHHH
Confidence 345788876 6788888888876 9999874 2 13579999653 478899999998888775
No 77
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=86.07 E-value=2.4 Score=30.56 Aligned_cols=61 Identities=15% Similarity=0.117 Sum_probs=43.4
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
.+++++++.. +..+..+.|.+.||.+....-+ ...+.|||+.... .+++|++++.+.|.++
T Consensus 300 ~~~~~~~~~~---~~~~~~~~l~~~gi~~~~g~~~-----~~~~~iRis~~~~----~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 300 MTTIVANTTM---LPGEINKILEPFDMAVGAGYGS-----KKETQIRIANFPA----HSLEQVHKLVQTLKEK 360 (362)
T ss_dssp SSEEEEEESS---CHHHHHHHHGGGTEEEEECSGG-----GTTTEEEEECCTT----SCHHHHHHHHHHHHHH
T ss_pred CceEEEecCC---CHHHHHHHHHHCCeEEecCccc-----cCCCEEEEECCCC----CCHHHHHHHHHHHHHH
Confidence 5667777654 7888889998889999853221 1235799997653 3578998888887664
No 78
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=86.00 E-value=1.1 Score=34.01 Aligned_cols=74 Identities=9% Similarity=0.033 Sum_probs=44.3
Q ss_pred CCCcee-eEeccCCCCCHHHHHHHHhhcCceeccCC-CCCCCCCCC---------------CCeeeEcchhHhhcCCCHH
Q 034072 10 TENHLV-LVNLKNKGIDGSRVEKVLEAVHIAANKNT-VPGDVSAMV---------------PGGIRMGTPALTSRGFVEE 72 (104)
Q Consensus 10 Td~Hlv-lvdl~~~gi~g~~a~~~Le~~gI~vnkn~-lP~d~~~~~---------------~sglRlGT~a~T~RG~~e~ 72 (104)
...|++ .+-+ +.+.+..+..+.|.+.||.++... .|-...+.. .+.|||.. -..++++
T Consensus 285 ~~~~~~~~~~~-~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~----~~~~t~~ 359 (377)
T 3ju7_A 285 AVIQQFMPILC-PEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPL----WEGMTKE 359 (377)
T ss_dssp CBCCSSEEEEC-CTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECC----CTTCCHH
T ss_pred cceEEEEEEEe-CChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCC----CCCCCHH
Confidence 445654 3433 334469999999999999998764 332211111 12344443 2378999
Q ss_pred HHHHHHHHHHHHHHHH
Q 034072 73 DFAKVAYFFDAAVKLT 88 (104)
Q Consensus 73 dm~~Ia~~i~~~l~~~ 88 (104)
|++.|++.|.+++...
T Consensus 360 di~~v~~~l~~~~~~~ 375 (377)
T 3ju7_A 360 IVEQIVICLGQKVVSA 375 (377)
T ss_dssp HHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999998877654
No 79
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=85.69 E-value=1.9 Score=32.21 Aligned_cols=66 Identities=11% Similarity=0.020 Sum_probs=44.8
Q ss_pred CceeeEeccCC-CCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNK-GIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+.++++++... +.+..+..+.| ++.||.+......+. ...+.+||+.. .+++|+++..+.|.+++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~lRis~~------~~~~~i~~~~~~l~~~l~ 401 (406)
T 1xi9_A 334 AFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGE---YGAGHFRAVFL------PPIEILEEAMDRFEKFMK 401 (406)
T ss_dssp SSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCG---GGTTBEEEECC------SCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCC---CCCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 45566777542 56788777776 499998865332221 11357999974 678898888888887775
No 80
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=85.60 E-value=1.2 Score=32.60 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=47.2
Q ss_pred CCeeeeC-CCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSG-GTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~g-gTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++.. ..+..++++++. .+++..+..+.|.+.||.+.... .+..+||+.... .+++|++++.+.
T Consensus 318 g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gi~v~~~~--------~~~~iRis~~~~----~~~~~i~~~~~~ 384 (390)
T 1elu_A 318 HVHCLATSAPQAGLVSFTVD-SPLGHRAIVQKLEEQRIYLRTIA--------DPDCIRACCHYI----TDEEEINHLLAR 384 (390)
T ss_dssp TEEESCSSCCSSSEEEEEEC-SSSCHHHHHHHHHHTTEECEEET--------TTTEEEEECCTT----CCHHHHHHHHHH
T ss_pred CcEEecCccccccEEEEEcC-CCCCHHHHHHHHHHCCEEEEecC--------CCCeEEEecccC----CCHHHHHHHHHH
Confidence 4555532 245678888874 46788899999999999987542 135799996432 467888887776
Q ss_pred HH
Q 034072 81 FD 82 (104)
Q Consensus 81 i~ 82 (104)
|.
T Consensus 385 l~ 386 (390)
T 1elu_A 385 LA 386 (390)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 81
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=85.58 E-value=3.4 Score=30.36 Aligned_cols=65 Identities=15% Similarity=0.159 Sum_probs=44.8
Q ss_pred ceeeEeccCCCCCHHHHHHHHhh-cCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~-~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+++++.+ +.+++..++.+.|.+ .||.+....-| .....+||+....+ .+++|++++.+.|.+++.
T Consensus 316 ~~~~~~~-~~~~~~~~~~~~L~~~~gi~v~~g~~~-----~~~~~iRi~~~~~~---~~~e~i~~~~~~l~~~l~ 381 (396)
T 2ch1_A 316 TVTGIMI-PKGVDWWKVSQYAMNNFSLEVQGGLGP-----TFGKAWRVGIMGEC---STVQKIQFYLYGFKESLK 381 (396)
T ss_dssp TEEEEEC-CTTCCHHHHHHHHHHHHCBCCBCCCGG-----GTTTEEEEECCGGG---CSHHHHHHHHHHHHHHHH
T ss_pred ceEEEEc-CCCCCHHHHHHHHHHhCCEEEecCccc-----cCCCEEEEECCCCc---CCHHHHHHHHHHHHHHHH
Confidence 4677776 346788888888754 69998643211 12457999963221 368999999999988775
No 82
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=85.54 E-value=3.6 Score=30.50 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=48.6
Q ss_pred CCeeeeCC---CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHH
Q 034072 2 GYELVSGG---TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA 78 (104)
Q Consensus 2 G~~vv~gg---Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia 78 (104)
|++++... ...+++++++. ++.+..+.|.+.||.+... ....+||+...+ ..+++|++++.
T Consensus 329 g~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~gi~~~~~---------~~~~lRis~~~~---~~t~~~i~~~~ 392 (416)
T 1qz9_A 329 ELTLVTPREHAKRGSHVSFEHP----EGYAVIQALIDRGVIGDYR---------EPRIMRFGFTPL---YTTFTEVWDAV 392 (416)
T ss_dssp CCEECSCSSGGGBCSEEEEECT----THHHHHHHHHTTTEECEEE---------TTTEEEEECCTT---TCCHHHHHHHH
T ss_pred CeEEeCCCCHHHcCCEEEEecC----CHHHHHHHHHhCCcEeccC---------CCCeEEEeCccc---CCCHHHHHHHH
Confidence 56665432 13577888864 3778888898999987421 135799997521 24689999999
Q ss_pred HHHHHHHH
Q 034072 79 YFFDAAVK 86 (104)
Q Consensus 79 ~~i~~~l~ 86 (104)
+.|.+++.
T Consensus 393 ~~l~~~~~ 400 (416)
T 1qz9_A 393 QILGEILD 400 (416)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99988875
No 83
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=85.44 E-value=2.5 Score=32.17 Aligned_cols=75 Identities=15% Similarity=0.181 Sum_probs=47.8
Q ss_pred CCceeeEeccC--CCCC-----HHHHHHHH-hhcCceeccCC-C-----C--CCCCCCCCCeeeEcchhHhhcC-CCHHH
Q 034072 11 ENHLVLVNLKN--KGID-----GSRVEKVL-EAVHIAANKNT-V-----P--GDVSAMVPGGIRMGTPALTSRG-FVEED 73 (104)
Q Consensus 11 d~Hlvlvdl~~--~gi~-----g~~a~~~L-e~~gI~vnkn~-l-----P--~d~~~~~~sglRlGT~a~T~RG-~~e~d 73 (104)
..+++++++.. .+++ +.++.+.| .+.||.+.... . | +...+...+.|||..+. . .+++|
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~----~~~t~e~ 427 (467)
T 2oqx_A 352 GGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPR----ATYTQTH 427 (467)
T ss_dssp CSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCT----TTSCHHH
T ss_pred CceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecC----CCCCHHH
Confidence 45788888743 2334 44456677 99999987522 1 1 10001112579998653 3 67899
Q ss_pred HHHHHHHHHHHHHHHH
Q 034072 74 FAKVAYFFDAAVKLTV 89 (104)
Q Consensus 74 m~~Ia~~i~~~l~~~~ 89 (104)
++++.+.|.+++....
T Consensus 428 i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 428 MDFIIEAFKHVKENAA 443 (467)
T ss_dssp HHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhhhh
Confidence 9999999999887543
No 84
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=85.42 E-value=2.7 Score=30.72 Aligned_cols=66 Identities=12% Similarity=0.093 Sum_probs=45.2
Q ss_pred CCCceeeEeccCCCCCHHHHHHHHhh-cCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 10 TENHLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 10 Td~Hlvlvdl~~~gi~g~~a~~~Le~-~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
....++++++. +..+..+.|.+ .||.+..-..++.. ....+.+||+.. .+++|+++..+.|.++++
T Consensus 307 ~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~~~~~-~~~~~~iRis~~------~~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 307 PYSFYVYLPVQ----NGENFAKTLYQNEGIITLPALYLGRN-RIGADYVRLALV------YDTPLLEKPLEIIETYRE 373 (376)
T ss_dssp SBSSEEEEECS----CHHHHHHHHHHHHCCBCEEGGGGCST-TTTTTEEEEECC------SCHHHHHHHHHHHHHHHC
T ss_pred CcceEEEEECC----CHHHHHHHHHHhCCEEEeCcHHhCCC-CCCCCeEEEEEc------CCHHHHHHHHHHHHHHHH
Confidence 34567788875 67777777766 99998754332211 123467999854 278999999888887764
No 85
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=85.41 E-value=2.2 Score=32.30 Aligned_cols=73 Identities=19% Similarity=0.244 Sum_probs=48.0
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHH-HHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVE-KVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~-~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|+++.. ......+|+++. +++..+.. +.+++.||.+......+.. ..+.|||+.. .+++|+++..+.
T Consensus 365 g~~~~~-~~~~~~~~~~~~--~~~~~~~~~~l~~~~gI~v~pg~~f~~~---~~~~iRis~~------~~~e~i~~~l~~ 432 (449)
T 3qgu_A 365 GFSVYG-GDDAPYIWVGFP--GKPSWDVFAEILERCNIVTTPGSGYGPA---GEGFVRASAF------GSRENILEAVRR 432 (449)
T ss_dssp TCCEEE-SSSSSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCGG---GTTEEEEECC------SCHHHHHHHHHH
T ss_pred CCeeeC-CCCeeEEEEECC--CCCHHHHHHHHHHHCCEEEecchHhCCC---CCCeEEEEec------CCHHHHHHHHHH
Confidence 455543 344678899986 67777765 5566779998754322211 1357999931 278999888888
Q ss_pred HHHHHH
Q 034072 81 FDAAVK 86 (104)
Q Consensus 81 i~~~l~ 86 (104)
|.++++
T Consensus 433 l~~~~~ 438 (449)
T 3qgu_A 433 FKEAYG 438 (449)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 877664
No 86
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=85.21 E-value=3.3 Score=30.43 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=43.6
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhc-CceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~-gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
.+++++.+ +.+.+..+..+.|.+. ||.+....-+. .+..+||+....+ ..+++++++.+.|.+++
T Consensus 327 ~~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRis~~~~~---~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 327 PTLTTVCI-PDGVDGKAVARRLLNEHNIEVGGGLGEL-----AGKVWRVGLMGFN---SRKESVDQLIPALEQVL 392 (393)
T ss_dssp SSEEEEEC-CTTCCHHHHHHHHHHHHCEECEECCGGG-----TTTEEEEECCGGG---CSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEc-CCCCCHHHHHHHHHhhCCEEEecCcccc-----CCCEEEEeCCccC---ChHHHHHHHHHHHHHHh
Confidence 46677765 3466888888888776 99987443221 2467999953332 25678988888887765
No 87
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=85.07 E-value=3 Score=30.61 Aligned_cols=67 Identities=15% Similarity=0.195 Sum_probs=45.9
Q ss_pred CceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
++++++++. .+++..+..+.|. +.||.+....-+. ....+||+....+ .+++|++++.+.|.+++..
T Consensus 315 ~~~~~~~~~-~~~~~~~~~~~L~~~~gi~v~~g~~~~-----~~~~~Ri~~~~~~---~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 315 STVTTIKVP-QGVDWLKAAQYAMKTYLVEISGGLGPT-----AGQVFRIGLMGQN---ATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp TTEEEEECC-TTCCHHHHHHHHHHHHCEECBCCCGGG-----TTTEEEEECCGGG---CSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEcC-CCCCHHHHHHHHHHhCCEEEecCcccc-----cCCEEEEEcccCc---CCHHHHHHHHHHHHHHHHH
Confidence 457778763 3678888888775 5699987432211 2357999973322 2578899999999888763
No 88
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=84.92 E-value=1.8 Score=31.88 Aligned_cols=65 Identities=17% Similarity=0.094 Sum_probs=42.9
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
.+.++++++.. +++..+..+.|.+.||.+......+.. ..+.+||+... +++|+++..+.|.+++
T Consensus 311 ~~~~~~~~~~~-~~~~~~~~~~l~~~gi~v~~g~~f~~~---~~~~~Ris~~~------~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 311 ATMYLWGRLPE-GVDDLEFGLRLVERGVALAPGRGFGPG---GKGFVRIALVR------PLEELLEAAKRIREAL 375 (376)
T ss_dssp BSSEEEEECCT-TCCHHHHHHHHHHTTEECEEGGGGCGG---GTTEEEEECCS------CHHHHHHHHHHHHHTC
T ss_pred eeEEEEEECCC-CCCHHHHHHHHHHCCEEEcCchhhCCC---CCCeEEEEecC------CHHHHHHHHHHHHHHh
Confidence 34567888753 567788777777779998753322111 23579999742 5788888777776543
No 89
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=84.77 E-value=1.6 Score=32.66 Aligned_cols=64 Identities=5% Similarity=-0.010 Sum_probs=45.7
Q ss_pred CceeeEeccC-------CCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKN-------KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 12 ~Hlvlvdl~~-------~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
..++++++.+ .+.+..+..+.|.+.||.+..... ..+.+||+.+. ..+++|++++.+.|.++
T Consensus 352 g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~-------~~~~iRi~~~~----~~~~~~i~~~~~~l~~~ 420 (426)
T 1sff_A 352 GAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGP-------YYNVLRILVPL----TIEDAQIRQGLEIISQC 420 (426)
T ss_dssp TTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEEST-------TSCEEEECCCT----TCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCC-------CCCEEEEECCc----cCCHHHHHHHHHHHHHH
Confidence 5788888852 234566777788888999874321 13579998552 35789999999999887
Q ss_pred HH
Q 034072 85 VK 86 (104)
Q Consensus 85 l~ 86 (104)
+.
T Consensus 421 l~ 422 (426)
T 1sff_A 421 FD 422 (426)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 90
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=84.52 E-value=2 Score=31.39 Aligned_cols=58 Identities=9% Similarity=0.020 Sum_probs=41.8
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
..+++++++.. +..++.+.|.+.||.+... . .+.+||+.+. ..+++|++++.+.|.++
T Consensus 317 ~g~~~~~~~~~---~~~~~~~~l~~~gi~~~~~----~-----~~~iRi~~~~----~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 317 RGLMLGLELER---ECKDYVLKALEKGLLINCT----A-----GKVLRFLPPL----IIQKEHIDRAISVLREI 374 (375)
T ss_dssp ETTEEEEECSS---CCHHHHHHHHHTTEECEEE----T-----TTEEEECCCT----TCCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEcC---cHHHHHHHHHHCCCEEecC----C-----CCEEEEECCC----CCCHHHHHHHHHHHHHh
Confidence 35678888753 4566777777899998742 1 3579999653 45789999988888765
No 91
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=84.33 E-value=2.7 Score=30.94 Aligned_cols=67 Identities=10% Similarity=0.006 Sum_probs=43.6
Q ss_pred CCceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCC---CCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGD---VSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d---~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
...++++++.. .+..+..+.| ++.||.+..-..++. ......+.+||+.. .+++|+++..+.|.+++
T Consensus 325 ~~~~~~~~~~~--~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~------~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 325 ASFYIWLKVPD--GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALV------ADVATCVKAAEDIVSLY 395 (396)
T ss_dssp SSSEEEEECTT--SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECC------SCHHHHHHHHHHHHHHC
T ss_pred eeEEEEEECCC--CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEc------CCHHHHHHHHHHHHHHh
Confidence 35678888864 4666666666 788999875432221 11223468999853 27889888888776654
No 92
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=84.24 E-value=3.4 Score=30.54 Aligned_cols=59 Identities=17% Similarity=0.197 Sum_probs=44.1
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
..+++++.+.. ++.+..+.|.+.||.+.. +. .+.+||..+. ..+++|++++.+.|.+++
T Consensus 333 ~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~----~~-----~~~iRi~~~~----~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 333 KGLFIGIELNE---PARPYCEQLKAAGLLCKE----TH-----ENVIRIAPPL----VISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp ETTEEEEEESS---CSHHHHHHHHTTTEECCC----BT-----TTEEEECCCT----TCCHHHHHHHHHHHHHHH
T ss_pred eeeEEEEEEcc---hHHHHHHHHHHCCcEEec----CC-----CCEEEEECCC----CCCHHHHHHHHHHHHHHh
Confidence 35677777654 778888889999999873 22 3679999654 357899999988887765
No 93
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=84.19 E-value=2.1 Score=32.41 Aligned_cols=77 Identities=16% Similarity=0.150 Sum_probs=46.3
Q ss_pred CCeeeeCCCCCceeeEeccCCCC-----CH-HHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGI-----DG-SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFA 75 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi-----~g-~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~ 75 (104)
|++++. +.-..++++++....- +. ..+++.+++.||.+..-..++. ..++.+||+... .+++|++
T Consensus 349 g~~~~~-~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRi~~~~-----~~~e~i~ 419 (435)
T 3piu_A 349 GISCLN-GNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHC---TEPGWFRVCFAN-----LPERTLD 419 (435)
T ss_dssp TCEECC-CCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTC---SSTTEEEEECSS-----SCHHHHH
T ss_pred CCcccC-CCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCC---CCCCEEEEEeeC-----CCHHHHH
Confidence 455443 2334678888754210 23 3344455777999875332211 124679999532 2679999
Q ss_pred HHHHHHHHHHHH
Q 034072 76 KVAYFFDAAVKL 87 (104)
Q Consensus 76 ~Ia~~i~~~l~~ 87 (104)
+..+.|.+++..
T Consensus 420 ~~l~~l~~~l~~ 431 (435)
T 3piu_A 420 LAMQRLKAFVGE 431 (435)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998888764
No 94
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=84.04 E-value=2.4 Score=31.34 Aligned_cols=66 Identities=18% Similarity=0.193 Sum_probs=44.0
Q ss_pred CceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+.++++++...+++..+..+.|. +.||.+......+. ..++.+||+... .++++.+..+.|.+++.
T Consensus 321 ~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~~Ris~~~------~~~~l~~~l~~l~~~l~ 387 (390)
T 1d2f_A 321 TYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGE---EGRGFVRLNAGC------PRSKLEKGVAGLINAIR 387 (390)
T ss_dssp CSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCG---GGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCC---CCCCeEEEEecC------CHHHHHHHHHHHHHHHH
Confidence 45567888655568888888887 79999875332211 123579999764 36777777777766654
No 95
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=83.95 E-value=2 Score=30.84 Aligned_cols=59 Identities=24% Similarity=0.213 Sum_probs=41.5
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
+..++++... ++.++.+.|.+.||.+.....++. ++.+||+.. .++|++++.+.+.+++
T Consensus 276 ~~~~~~~~~~----~~~~~~~~l~~~gi~v~~g~~~~~-----~~~iRis~~-------~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 276 EANFVLVENA----AGERTLRFLRERGIQVKDAGQFGL-----HHHIRISIG-------REEDNDRLLAALAEYS 334 (337)
T ss_dssp SSSEEEEECT----TTHHHHHHHHHTTEECEEGGGGTC-----CSEEEEECC-------CHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEcC----CHHHHHHHHHHCCeEEEECccCCC-----CCeEEEecC-------CHHHHHHHHHHHHHHh
Confidence 3446666643 467888999999999876443322 357999964 4889988888776654
No 96
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=83.71 E-value=2.2 Score=31.53 Aligned_cols=67 Identities=16% Similarity=0.149 Sum_probs=45.2
Q ss_pred CCceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
-+.++++++...+++..+..+.|. +.||.+......+. ...+.+||+... .++++.+..+.|.+++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---~~~~~iRis~~~------~~~~l~~~l~~l~~~l~ 391 (399)
T 1c7n_A 324 GTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGD---GGIGFERINLAA------PSSVIQESLERLNKALK 391 (399)
T ss_dssp BSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCG---GGTTEEEEECCS------CHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCC---CCCCeEEEEecc------CHHHHHHHHHHHHHHHH
Confidence 344557888655678888888884 89999875332211 123579999753 26788888888777765
No 97
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=83.34 E-value=3.8 Score=30.45 Aligned_cols=69 Identities=14% Similarity=0.168 Sum_probs=45.2
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ...+.++++++. .+..+..+.| ++.||.+......+. ++.+||+.. .+++|+++..+.
T Consensus 317 g~~~~~-~~~~~~~~~~~~---~~~~~l~~~l~~~~gi~v~~g~~f~~-----~~~~Ris~~------~~~~~l~~~l~~ 381 (389)
T 1o4s_A 317 GVKFVE-PEGAFYLFFKVR---GDDVKFCERLLEEKKVALVPGSAFLK-----PGFVRLSFA------TSIERLTEALDR 381 (389)
T ss_dssp TCCCCC-CSBSSEEEEECS---SCHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEEECC------SCHHHHHHHHHH
T ss_pred CCeeec-CCcceEEEEeCC---CCHHHHHHHHHHHCCEEEeCchhcCC-----CCeEEEEEe------CCHHHHHHHHHH
Confidence 444442 233556777875 5777787777 499999875322221 247999976 277888888877
Q ss_pred HHHHH
Q 034072 81 FDAAV 85 (104)
Q Consensus 81 i~~~l 85 (104)
|.+++
T Consensus 382 l~~~l 386 (389)
T 1o4s_A 382 IEDFL 386 (389)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 98
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=82.42 E-value=2.6 Score=30.87 Aligned_cols=71 Identities=17% Similarity=0.109 Sum_probs=45.4
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ...+.++++++.. +..+..+.|. +.||.+......+.. ..+.+||+.. .+++++++..+.
T Consensus 297 g~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~~~gi~v~~g~~f~~~---~~~~~Ri~~~------~~~~~i~~~~~~ 363 (370)
T 2z61_A 297 GWEVNN-PIGAYYVFPNIGE---DGREFAYKLLKEKFVALTPGIGFGSK---GKNYIRISYA------NSYENIKEGLER 363 (370)
T ss_dssp TCBCCC-CCBTTEECCBCSS---CHHHHHHHHHHHHCEECEEGGGGCGG---GSSBEEEECC------SCHHHHHHHHHH
T ss_pred CCeecC-CCcceEEEEecCC---CHHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEEe------CCHHHHHHHHHH
Confidence 444432 2235667778754 6777777775 899998753222110 1357999977 467888888887
Q ss_pred HHHHH
Q 034072 81 FDAAV 85 (104)
Q Consensus 81 i~~~l 85 (104)
|.+++
T Consensus 364 l~~~l 368 (370)
T 2z61_A 364 IKEFL 368 (370)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77765
No 99
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=81.91 E-value=1.6 Score=31.80 Aligned_cols=79 Identities=8% Similarity=-0.028 Sum_probs=47.5
Q ss_pred CCeeeeCCCCCceeeEeccCCC-CCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKG-IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~g-i~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|+++.....+++++|+++...+ .+..++.+.|.+.||.+..-..|. + ..+-+|+....-. ....++++++..+.
T Consensus 277 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~---~-~~~~~r~~i~~~~-~~~~~~~l~~al~~ 351 (357)
T 3lws_A 277 GVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDK---D-GYCSTEISVGDAY-GELDQQTRDAGFAR 351 (357)
T ss_dssp TEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEEC---S-SEEEEEEEBCTTG-GGSCHHHHHHHHHH
T ss_pred CCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccC---C-CceEEEEEecchh-hhcCHHHHHHHHHH
Confidence 4555434567789999986432 235778889999999997542222 1 1235887543221 12466777766666
Q ss_pred HHHHH
Q 034072 81 FDAAV 85 (104)
Q Consensus 81 i~~~l 85 (104)
|.++|
T Consensus 352 l~~al 356 (357)
T 3lws_A 352 LRQAF 356 (357)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 65543
No 100
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=81.91 E-value=3.6 Score=34.91 Aligned_cols=55 Identities=13% Similarity=0.079 Sum_probs=42.5
Q ss_pred cCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 20 KNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 20 ~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
+..|+++.++.+.|.+.||.+++. ....+|+- ++-|-+++|+..+.+.+.++.+.
T Consensus 511 ~~~g~~~~~l~~~L~e~GI~v~~~---------~~~~ir~~----~s~g~t~e~i~~Ll~aL~~i~~~ 565 (730)
T 1c4k_A 511 EDFGVPATIVANYLRDHGIIPEKS---------DLNSILFL----MTPAETPAKMNNLITQLLQLQRL 565 (730)
T ss_dssp CSSCCCHHHHHHHHHHTTCCCSEE---------CSSEEEEE----CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHCCcEEEEC---------CCCeEEEE----eCCCCCHHHHHHHHHHHHHHHHh
Confidence 456899999999999999999865 13457764 35567889999988888776643
No 101
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=81.20 E-value=6.4 Score=29.14 Aligned_cols=61 Identities=7% Similarity=0.072 Sum_probs=45.3
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..++++++.. ..+..+..+.|.+.||.+... . +..+||+.+. ..+++|++++.+.|.+++.
T Consensus 335 g~~~~~~~~~-~~~~~~l~~~l~~~gi~v~~~----~-----~~~iRis~~~----~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 335 GLMIGIQFRE-EVSNREVATKCFENKLLVVPA----G-----NNTIRFLPPL----TVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp TTEEEEEECT-TSCHHHHHHHHHHTTEECEEE----T-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEECC-hHHHHHHHHHHHHCCCEEccC----C-----CCEEEEECCc----CCCHHHHHHHHHHHHHHHh
Confidence 4677888754 346888888888899998743 1 3579999643 4678999999988887764
No 102
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=81.11 E-value=1.8 Score=32.21 Aligned_cols=45 Identities=13% Similarity=0.210 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
+++...++..|++.||.+. +++||+... ++++|++++.+.|.+++
T Consensus 356 ~~~~~~~~~ll~~~gi~v~-------------~~~Ris~~~-----~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 356 GLKPEQVERLTKEFSIYMT-------------KDGRISVAG-----VASSNVGYLAHAIHQVT 400 (401)
T ss_dssp CCCHHHHHHHHHHHCEECC-------------TTCEEEGGG-----CCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEecc-------------CCCeEEecc-----CChhhHHHHHHHHHHHh
Confidence 3568888888899999985 348998753 56677999999888765
No 103
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=80.92 E-value=10 Score=27.87 Aligned_cols=66 Identities=23% Similarity=0.221 Sum_probs=44.6
Q ss_pred CceeeEeccCCCCCHHHHHHHHhh-cCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~-~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+++++.+ +.+.+..+..+.|.+ .||.+....- +...+.+||+.....+ .+++++++.+.|.+++.
T Consensus 322 ~~~~~~~~-~~~~~~~~l~~~L~~~~gi~v~~g~~-----~~~~~~iRi~~~~~~~---~~e~i~~~~~~l~~~~~ 388 (416)
T 3isl_A 322 PVVTCVEI-PGGIDGESVRDMLLAQFGIEIASSFG-----PLAGKIWRIGTMGYSC---RKENVLFVLAGLEAVLL 388 (416)
T ss_dssp TTEEEEEC-CTTCCHHHHHHHHHHHHCEECBCCCS-----TTTTTEEEEECCGGGC---SHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeC-CCCCCHHHHHHHHHHhCCEEEecCCC-----CCCCCEEEEecccCCC---cHHHHHHHHHHHHHHHH
Confidence 46666765 346788888888855 5999884331 1224679999754432 34449999999988876
No 104
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=80.27 E-value=1 Score=32.85 Aligned_cols=77 Identities=13% Similarity=0.220 Sum_probs=49.6
Q ss_pred CCeeeeCC-CCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC-CCCCCCeee-EcchhHhhcCCCHHHHHHHH
Q 034072 2 GYELVSGG-TENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV-SAMVPGGIR-MGTPALTSRGFVEEDFAKVA 78 (104)
Q Consensus 2 G~~vv~gg-Td~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~-~~~~~sglR-lGT~a~T~RG~~e~dm~~Ia 78 (104)
|++++... ...+++++++. +..++.+.|.+.||.+.. ..+... ....++.+| |+.... ..+++|++++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~---~~~~~~i~~~~ 360 (371)
T 2e7j_A 289 GIKQLGDNPHNHDLMFFHAE----VLYEISKKAKGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTY---GLSDEEVDYVL 360 (371)
T ss_dssp TCEEESSSSCCSSEEEEECH----HHHHHHHHSSSGGGHHHH-HHHHTTEECSCTTCCSEEEEECT---TCCHHHHHHHH
T ss_pred CcEEecCCCccCceEEEECC----CHHHHHHHHHHCCEEEEe-ccccccccCCCCCceEEEEeecc---CCCHHHHHHHH
Confidence 45555321 14678999874 677888889999999875 211110 011145799 886432 15789999999
Q ss_pred HHHHHHHH
Q 034072 79 YFFDAAVK 86 (104)
Q Consensus 79 ~~i~~~l~ 86 (104)
+.|.+++.
T Consensus 361 ~~l~~~~~ 368 (371)
T 2e7j_A 361 NAFKEIIE 368 (371)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98888764
No 105
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=80.06 E-value=3.5 Score=30.36 Aligned_cols=56 Identities=23% Similarity=0.251 Sum_probs=39.0
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccC-CCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKN-TVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 82 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn-~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~ 82 (104)
...++++++. +..+..+.|.+.||.+... ..++. .+.+||+.. .++|++++.+.+.
T Consensus 296 ~~~~~~~~~~----~~~~l~~~L~~~gI~v~~~g~~~~~-----~~~iRis~~-------~~~e~~~~~~~l~ 352 (356)
T 1fg7_A 296 ETNYILARFK----ASSAVFKSLWDQGIILRDQNKQPSL-----SGCLRITVG-------TREESQRVIDALR 352 (356)
T ss_dssp SSSEEEEEET----THHHHHHHHHHTTEECEECTTSTTC-----TTEEEEECC-------CHHHHHHHHHHHH
T ss_pred CCeEEEEECC----CHHHHHHHHHHCCEEEEECCCCCCC-----CCeEEEEeC-------CHHHHHHHHHHHH
Confidence 4556788874 6788888999999999762 22221 247999964 4678877766654
No 106
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=80.00 E-value=5.8 Score=30.19 Aligned_cols=72 Identities=13% Similarity=0.018 Sum_probs=44.5
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++....--|.+.+.+ +.+..++.+.|.+.||.+... |+.. ...+.|||+....+ +++|++++.+.|
T Consensus 365 g~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~gi~v~~~--~~~~--~~~~~lRis~~~~~----t~edi~~~~~~l 433 (438)
T 1wyu_A 365 GVRPFTPKPFFNEFALAL---PKDPEAVRRALAERGFHGATP--VPRE--YGENLALFAATELH----EEEDLLALREAL 433 (438)
T ss_dssp TCEECSCSSBCSEEEEEC---SSCHHHHHHHHHHTTCCCCEE--CCTT--SCSSEEEEECCTTC----CHHHHHHHHHHH
T ss_pred CeEECCCCCeEEEEEEeC---CCCHHHHHHHHHHCCceeccc--cccc--cCCCeEEEEecccC----CHHHHHHHHHHH
Confidence 666664322233444543 357888999998899998211 1110 01457999976543 568998888877
Q ss_pred HHH
Q 034072 82 DAA 84 (104)
Q Consensus 82 ~~~ 84 (104)
.++
T Consensus 434 ~~~ 436 (438)
T 1wyu_A 434 KEV 436 (438)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 107
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=79.66 E-value=4.2 Score=30.57 Aligned_cols=69 Identities=19% Similarity=0.260 Sum_probs=42.6
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHH-HHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSR-VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~-a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|+++.. +..+..+|+++. +.+..+ ++..+++.||.+..-..++.. ..+.+||+. ..+++++++..+.
T Consensus 353 g~~~~~-~~~~~~~~~~~~--~~~~~~~~~~ll~~~gv~v~~g~~f~~~---~~~~iRis~------~~~~e~l~~~l~r 420 (432)
T 3ei9_A 353 GYDVYG-GKNAPYVWVHFP--NQSSWDVFAEILEKTHVVTTPGSGFGPG---GEGFVRVSA------FGHRENILEACRR 420 (432)
T ss_dssp TCCEEE-CSSSSEEEEECT--TSCHHHHHHHHHHHHCEECEEGGGGCGG---GTTEEEEEC------CSCHHHHHHHHHH
T ss_pred CceecC-CCcceEEEEECC--CCCHHHHHHHHHHHCCEEEeCchHhCCC---CCCEEEEEe------cCCHHHHHHHHHH
Confidence 455553 345667899986 556655 555677889998764333211 135799994 3367776665555
Q ss_pred HH
Q 034072 81 FD 82 (104)
Q Consensus 81 i~ 82 (104)
|.
T Consensus 421 l~ 422 (432)
T 3ei9_A 421 FK 422 (432)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 108
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=79.66 E-value=1.9 Score=33.07 Aligned_cols=60 Identities=18% Similarity=0.301 Sum_probs=43.8
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcc-hhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT-~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
..++++++. .+..++.+.|.+.||.+... .++.|||+. +..+ +++|+.++.+.|.+++..
T Consensus 400 g~~~~~~~~---~~~~~l~~~L~~~Gi~v~~~---------~~~~iRis~~~~~~----t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 400 GCQLTITFS---VPNKDVFQELEKRGVVCDKR---------NPNGIRVAPVPLYN----SFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp CSCEEEEEC---CTTCCHHHHHHTTTEECEEE---------TTTEEEEBCCTTTC----CHHHHHHHHHHHHHHHTC
T ss_pred ccEEEEEec---CCHHHHHHHHHHCCEEEecC---------CCCEEEEeCcccCC----CHHHHHHHHHHHHHHHHh
Confidence 446777764 35677888899999998721 146799995 4443 579999999999887763
No 109
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=79.47 E-value=1.8 Score=31.52 Aligned_cols=52 Identities=15% Similarity=0.256 Sum_probs=35.5
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 82 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~ 82 (104)
...+++++.. .+..+..+.|.+.||.+.. ..+.+||+.. .++|++++.+.+.
T Consensus 281 ~~~~~~~~~~--~~~~~~~~~l~~~gi~v~~----------~~~~iRis~~-------~~~~i~~~~~~l~ 332 (335)
T 1uu1_A 281 GNFVFVFMEK--EEKERLLEHLRTKNVAVRS----------FREGVRITIG-------KREENDMILRELE 332 (335)
T ss_dssp SSEEEEECCT--HHHHHHHHHHHHHTEEEEE----------ETTEEEEECC-------CHHHHHHHHHHHH
T ss_pred CeEEEEECCC--CCHHHHHHHHHHCCEEEEE----------CCCeEEEEeC-------CHHHHHHHHHHHH
Confidence 4567888753 4677788888889999976 1357999962 2466666655554
No 110
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=79.45 E-value=8 Score=28.36 Aligned_cols=65 Identities=18% Similarity=0.240 Sum_probs=44.7
Q ss_pred CceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcc-hhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT-~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+++++.+ +.+++..++.+.|. +.||.+....-| .....+||+. ...+ +++|++++.+.|.+++.
T Consensus 322 ~~~~~~~~-~~~~~~~~l~~~l~~~~gi~v~~g~~~-----~~~~~iRi~~~~~~~----~~~~i~~~~~~l~~~l~ 388 (411)
T 3nnk_A 322 NNVLGVVI-PQGINGDQARKLMLEDFGIEIGTSFGP-----LHGKVWRIGTMGYNA----RKDCVMTTLSALEAVLN 388 (411)
T ss_dssp SSEEEEEC-CTTCCHHHHHHHHHHHHSEEEEECCGG-----GTTTEEEEECCGGGC----SHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEC-CCCCCHHHHHHHHHHhcCeEEeCccCC-----CCCCEEEEeCccCcC----CHHHHHHHHHHHHHHHH
Confidence 46667765 34678888888774 559998744211 1235799996 4433 47899999999988876
No 111
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=79.40 E-value=4.6 Score=30.17 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=41.6
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..+++++. +..+..+.|++.||.+.. + .+.+||+. + ..+++|+++..+.|.+++.
T Consensus 359 ~~~~~~~~----~~~~~~~~l~~~gi~v~~----g------~~~iRis~---~--~~~~~~i~~~~~~l~~~l~ 413 (418)
T 3rq1_A 359 FFITIPTD----SANAICEELKKEHIYVIA----L------ANGIRIAA---C--GIPKCQMTGLAEKIYNAMK 413 (418)
T ss_dssp SEEEEECT----THHHHHHHHHHTTEECEE----C------SSEEEEEG---G--GSCHHHHTTHHHHHHHHHH
T ss_pred EEEEcCCC----CHHHHHHHHHhCCEEEec----C------CCCeEEEE---e--cCCHHHHHHHHHHHHHHHH
Confidence 34566652 778888999999999864 2 25699982 2 3588999999999988875
No 112
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=79.09 E-value=7.1 Score=30.05 Aligned_cols=68 Identities=15% Similarity=0.111 Sum_probs=46.1
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..++|+++. .+++..+..+.|.+.||.+..-...+. .......+||+... .+++|+++..+.|.+++.
T Consensus 376 g~~~~v~~~-~~~~~~~l~~~l~~~gV~v~pg~~f~~-~~~~~~~iRls~~~-----~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 376 GMFIWVTLP-DGIDSKKMLERAIKKGVAYVPGEAFYA-HRDVKNTMRLNFTY-----VDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp SSEEEEECS-TTCCHHHHHHHHHHTTEECEEGGGGST-TCCCCSEEEEECSS-----SCTHHHHHHHHHHHHHHH
T ss_pred cEEEEEEcC-CCCCHHHHHHHHHHCCcEEEcchhhcC-CCCCCCEEEEEeCC-----CCHHHHHHHHHHHHHHHH
Confidence 457888874 366888887777777999875321111 11123579999653 278999999998888775
No 113
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=79.05 E-value=6.4 Score=29.48 Aligned_cols=71 Identities=7% Similarity=0.069 Sum_probs=47.4
Q ss_pred ceeeEeccC---CCCCHHHHHHHHhhc-Cce---eccCCCCCCC-C------------------------CCC------C
Q 034072 13 HLVLVNLKN---KGIDGSRVEKVLEAV-HIA---ANKNTVPGDV-S------------------------AMV------P 54 (104)
Q Consensus 13 Hlvlvdl~~---~gi~g~~a~~~Le~~-gI~---vnkn~lP~d~-~------------------------~~~------~ 54 (104)
|++.+++.+ .+++..++.+.|.+. ||. +..-..|... + .+. .
T Consensus 304 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (418)
T 2c81_A 304 YGYVFRFDPVKFGGLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASG 383 (418)
T ss_dssp SEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHH
T ss_pred EEEEEEEccccccccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHh
Confidence 455577653 367899999999888 999 7754433210 0 110 1
Q ss_pred CeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 55 GGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 55 sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+.|||.....+ -+++|++.+.+.|.+++.
T Consensus 384 ~~lrl~~~~~~---gt~edi~~~~~~l~~~~~ 412 (418)
T 2c81_A 384 QSIVIHHAILL---AEPSHLSLLVDAVAELAR 412 (418)
T ss_dssp HEEEEEGGGGG---SCHHHHHHHHHHHHHHHH
T ss_pred CEEEecCCccC---CCHHHHHHHHHHHHHHHH
Confidence 46898865543 168999999999988765
No 114
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=78.95 E-value=3.9 Score=30.57 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=46.6
Q ss_pred CCeeeeCCCCCceeeEeccCC-CCCHHHHHHHH-hhcCceeccCCC--CCCC------CCCCCCeeeEcchhHhhcCCCH
Q 034072 2 GYELVSGGTENHLVLVNLKNK-GIDGSRVEKVL-EAVHIAANKNTV--PGDV------SAMVPGGIRMGTPALTSRGFVE 71 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~-gi~g~~a~~~L-e~~gI~vnkn~l--P~d~------~~~~~sglRlGT~a~T~RG~~e 71 (104)
|++++. ...+.++++++... +.+..+..+.| ++.||.+..... +... .....+.+||+.. .++
T Consensus 307 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~------~~~ 379 (411)
T 2o0r_A 307 GFAVHD-SYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC------KRD 379 (411)
T ss_dssp TCEECC-CCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC------SCH
T ss_pred CCEecC-CCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec------CCH
Confidence 455442 22355788888653 25677777655 688999865321 1110 0001346999963 378
Q ss_pred HHHHHHHHHHHHHHH
Q 034072 72 EDFAKVAYFFDAAVK 86 (104)
Q Consensus 72 ~dm~~Ia~~i~~~l~ 86 (104)
+|+++..+.|.+++.
T Consensus 380 e~i~~~~~~l~~~~~ 394 (411)
T 2o0r_A 380 DTLDEAIRRLSVLAE 394 (411)
T ss_dssp HHHHHHHHHHGGGGC
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888776554
No 115
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=78.36 E-value=8.4 Score=29.43 Aligned_cols=62 Identities=16% Similarity=0.180 Sum_probs=45.6
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..++++++.....+..+..+.|.+.||.+... ..+.|||..+. ..+++|++++.+.|.+++.
T Consensus 366 g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~---------~~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 427 (433)
T 1z7d_A 366 GLLCAIEFKNELVNVLDICLKLKENGLITRDV---------HDKTIRLTPPL----CITKEQLDECTEIIVKTVK 427 (433)
T ss_dssp TTEEEEEECTTTCCHHHHHHHHHHTTEECCEE---------TTTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEccChhHHHHHHHHHHHCCeEEecC---------CCCEEEEECCc----CCCHHHHHHHHHHHHHHHH
Confidence 46788887643246778888888899998742 13579997542 4688999999999988775
No 116
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=78.10 E-value=13 Score=27.25 Aligned_cols=63 Identities=13% Similarity=0.083 Sum_probs=45.2
Q ss_pred CceeeEeccCC-CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
.+++++++... ..+..+..+.|.+.||.+... . .+.+||..+. ..+++|++++.+.|.+++..
T Consensus 336 g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~----~-----~~~iRi~~~~----~~~~e~i~~~~~~l~~~l~~ 399 (406)
T 4adb_A 336 GLLIGCVLNADYAGQAKQISQEAAKAGVMVLIA----G-----GNVVRFAPAL----NVSEEEVTTGLDRFAAACEH 399 (406)
T ss_dssp TTEEEEEECTTTTTCHHHHHHHHHHTTEECEES----S-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeec----C-----CCeEEEECCC----CCCHHHHHHHHHHHHHHHHH
Confidence 35666766431 126888888888889998752 1 3579997543 35789999999999888864
No 117
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=77.97 E-value=9.8 Score=28.80 Aligned_cols=63 Identities=16% Similarity=0.034 Sum_probs=46.2
Q ss_pred CceeeEeccCC-CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
..++++++... +.+..++.+.|.+.||.+... . +..+||..+. ..+++|++++.+.|.+++..
T Consensus 354 g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~----~-----~~~iRl~~~~----~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 354 GLLIGAELKPKYKGRARDFLYAGAEAGVMVLNA----G-----ADVMRFAPSL----VVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp TTEEEEEECGGGTTCHHHHHHHHHHTTEECEES----S-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECCCchHHHHHHHHHHHHCCCEEEeC----C-----CCEEEEECCC----CCCHHHHHHHHHHHHHHHHH
Confidence 46778887532 235778888888899998743 1 3569999643 46789999999999888764
No 118
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=77.94 E-value=11 Score=27.21 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=45.1
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCC--CCC-CC-------CC----CCCeeeEcchhHhhcCCCHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV--PGD-VS-------AM----VPGGIRMGTPALTSRGFVEEDFAKV 77 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~l--P~d-~~-------~~----~~sglRlGT~a~T~RG~~e~dm~~I 77 (104)
.+++.+.+. ++++.+..+.|.+.||.+..-.. +.. .+ .. ..+.|||+... ..+++|++++
T Consensus 292 ~~~~~~~~~--~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~----~~~~~~i~~~ 365 (384)
T 1eg5_A 292 PNTLSVSFP--NIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCK----YNTEEEVDYF 365 (384)
T ss_dssp TTEEEEECT--TCCHHHHHHHHHHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCT----TCCHHHHHHH
T ss_pred CCEEEEEeC--CCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCC----CCCHHHHHHH
Confidence 455666554 56888999999999999875211 110 00 00 02569999643 2478999999
Q ss_pred HHHHHHHHHH
Q 034072 78 AYFFDAAVKL 87 (104)
Q Consensus 78 a~~i~~~l~~ 87 (104)
.+.|.++++.
T Consensus 366 ~~~l~~~~~~ 375 (384)
T 1eg5_A 366 LKKIEEILSF 375 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999888753
No 119
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=77.78 E-value=5.4 Score=29.88 Aligned_cols=77 Identities=10% Similarity=0.020 Sum_probs=46.6
Q ss_pred CCeeeeCCCCCceeeEeccCCC-----------CCHHHHHHHH-hhcCceeccCCCCCCCC--CCCCCeeeEcchhHhhc
Q 034072 2 GYELVSGGTENHLVLVNLKNKG-----------IDGSRVEKVL-EAVHIAANKNTVPGDVS--AMVPGGIRMGTPALTSR 67 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~g-----------i~g~~a~~~L-e~~gI~vnkn~lP~d~~--~~~~sglRlGT~a~T~R 67 (104)
|++++. .....++++++.... .+..+..+.| ++.||.+......+... ....+.+||+..
T Consensus 336 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~----- 409 (429)
T 1yiz_A 336 GMNPTV-PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFF----- 409 (429)
T ss_dssp TCEEEE-CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECC-----
T ss_pred CCcccC-CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEec-----
Confidence 455543 233567888986431 3556666655 58999987532111100 001357999975
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~~~l 85 (104)
.+++|+++..+.|.+++
T Consensus 410 -~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 410 -KKDENLQKAAEILRKWK 426 (429)
T ss_dssp -SCHHHHHHHHHHHHHHS
T ss_pred -CCHHHHHHHHHHHHHhc
Confidence 37899988888887765
No 120
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=77.75 E-value=3.3 Score=30.64 Aligned_cols=70 Identities=21% Similarity=0.246 Sum_probs=45.6
Q ss_pred CceeeEeccC-CCCCHHHHHHHHhhcCceeccCCCCCCCCC-C--------------CCCeeeEcchhHhhcCCCHHHHH
Q 034072 12 NHLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGDVSA-M--------------VPGGIRMGTPALTSRGFVEEDFA 75 (104)
Q Consensus 12 ~Hlvlvdl~~-~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~-~--------------~~sglRlGT~a~T~RG~~e~dm~ 75 (104)
.|++++.+.. .+++..++.+.|.+.||.+..-..|-...+ + ....|||... ..++++|++
T Consensus 305 ~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~----~~~t~edi~ 380 (391)
T 3dr4_A 305 FWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTH----AGLTEADID 380 (391)
T ss_dssp CSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCC----TTCCHHHHH
T ss_pred eEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCC----CCCCHHHHH
Confidence 3556666543 377899999999999999885443322111 0 1235666543 356889999
Q ss_pred HHHHHHHHHH
Q 034072 76 KVAYFFDAAV 85 (104)
Q Consensus 76 ~Ia~~i~~~l 85 (104)
.+++.|.+++
T Consensus 381 ~~~~~l~~~l 390 (391)
T 3dr4_A 381 RVIAALDQVL 390 (391)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHHh
Confidence 9999887653
No 121
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=77.05 E-value=3.9 Score=30.58 Aligned_cols=60 Identities=12% Similarity=0.092 Sum_probs=38.7
Q ss_pred CCCHHHHHHHHhhcCceeccCCCCCC-CCCCCC--------------CeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 23 GIDGSRVEKVLEAVHIAANKNTVPGD-VSAMVP--------------GGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnkn~lP~d-~~~~~~--------------sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+++..++.+.|.+.||.+....-|.. .+.+.. .++|+.+ ....+++|++.+.+.|.+++.
T Consensus 311 ~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 311 HPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS----GTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC----CTTCCHHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC----CCCCCHHHHHHHHHHHHHHHh
Confidence 45788899999999999876533311 111110 2344443 355889999999998877654
No 122
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=76.54 E-value=2.1 Score=31.94 Aligned_cols=78 Identities=10% Similarity=-0.000 Sum_probs=46.5
Q ss_pred CCeeeeCCCCCceeeEeccCCCC-------------CHHHHHHHHhhcCceeccCCCCCCC--CCCCCCeeeEcchhHhh
Q 034072 2 GYELVSGGTENHLVLVNLKNKGI-------------DGSRVEKVLEAVHIAANKNTVPGDV--SAMVPGGIRMGTPALTS 66 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi-------------~g~~a~~~Le~~gI~vnkn~lP~d~--~~~~~sglRlGT~a~T~ 66 (104)
|++++. .....++++++...+. +...++..|++.||.+..-...+.. .+...+.+||+..
T Consensus 328 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~---- 402 (422)
T 3fvs_A 328 GLKPII-PQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFV---- 402 (422)
T ss_dssp TCEEEB-CSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECC----
T ss_pred CCeecC-CCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEec----
Confidence 455443 2445678888754211 1244555688899998753211110 0112467999833
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q 034072 67 RGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 67 RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+++|+++..+.|.++++
T Consensus 403 --~~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 403 --KDEATLQAMDEKLRKWKV 420 (422)
T ss_dssp --CCHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHHHHh
Confidence 288999999988888764
No 123
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=76.43 E-value=7.2 Score=28.69 Aligned_cols=71 Identities=8% Similarity=-0.018 Sum_probs=46.0
Q ss_pred CceeeEeccCC-CCCHHHHHHHHhhcCceeccCCCCCCCC------------------CC------CCCeeeEcchhHhh
Q 034072 12 NHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVS------------------AM------VPGGIRMGTPALTS 66 (104)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~a~~~Le~~gI~vnkn~lP~d~~------------------~~------~~sglRlGT~a~T~ 66 (104)
.|++++++... +.+..+..+.|.+.||.+....-|.-.. .+ ..+.|||....
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--- 366 (388)
T 1b9h_A 290 HYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRV--- 366 (388)
T ss_dssp CSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGG---
T ss_pred eEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCC---
Confidence 57888987642 1256778888989999997654332100 00 01246666433
Q ss_pred cCC-CHHHHHHHHHHHHHHHH
Q 034072 67 RGF-VEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 67 RG~-~e~dm~~Ia~~i~~~l~ 86 (104)
.+ +++|++.+++.|.++++
T Consensus 367 -~~~t~edi~~~~~~l~~~~~ 386 (388)
T 1b9h_A 367 -LLAGEPELHATAEIIADAVA 386 (388)
T ss_dssp -GGSCHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHh
Confidence 35 78999999999988765
No 124
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=76.28 E-value=14 Score=27.34 Aligned_cols=73 Identities=14% Similarity=0.057 Sum_probs=45.2
Q ss_pred CCeeeeCCCCCceeeEeccC----CCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKN----KGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAK 76 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~----~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~ 76 (104)
|++++. .....++++++.. .+.+..+..+.| ++.||.+......+. ++.+||+. +..++++.+
T Consensus 334 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~-----~~~iRis~------~~~~e~l~~ 401 (416)
T 1bw0_A 334 GLAPTM-PRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHA-----PGFTRLTT------TRPVEVYRE 401 (416)
T ss_dssp TEEECC-CCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEEEC------CSCHHHHHH
T ss_pred CCcccC-CCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCC-----CCeEEEEe------cCCHHHHHH
Confidence 444442 2234556777642 124677766655 799999875332221 35799997 246788888
Q ss_pred HHHHHHHHHH
Q 034072 77 VAYFFDAAVK 86 (104)
Q Consensus 77 Ia~~i~~~l~ 86 (104)
..+.|.+++.
T Consensus 402 ~l~~l~~~l~ 411 (416)
T 1bw0_A 402 AVERIKAFCQ 411 (416)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887777765
No 125
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=76.04 E-value=11 Score=27.64 Aligned_cols=71 Identities=17% Similarity=0.106 Sum_probs=43.2
Q ss_pred CCeeeeCCCCCceeeEeccCCC-CCHHHHHHHH-hhcCceeccCC-CCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKG-IDGSRVEKVL-EAVHIAANKNT-VPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA 78 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~g-i~g~~a~~~L-e~~gI~vnkn~-lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia 78 (104)
|++++. ...++++++++...+ .+..+..+.| ++.||.+.... .+.+. ..++.+||+.. ..++|+++..
T Consensus 310 g~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~--~~~~~iRis~~------~~~~~i~~~~ 380 (386)
T 1u08_A 310 RLEILP-CEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADP--FPHKLIRLCFA------KKESTLLAAA 380 (386)
T ss_dssp SCEECC-CCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSC--CCSCEEEEECC------SCHHHHHHHH
T ss_pred CCeecC-CCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCC--CCCCEEEEEEc------CCHHHHHHHH
Confidence 455442 233578889986532 5677776655 58899987532 11111 12457999974 3678877766
Q ss_pred HHH
Q 034072 79 YFF 81 (104)
Q Consensus 79 ~~i 81 (104)
+.|
T Consensus 381 ~~l 383 (386)
T 1u08_A 381 ERL 383 (386)
T ss_dssp HHH
T ss_pred HHH
Confidence 655
No 126
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=75.72 E-value=11 Score=29.34 Aligned_cols=73 Identities=8% Similarity=0.016 Sum_probs=48.9
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++... ..++++. ..+++..++.+.|.+.||.++.... +..+|+......+ +++|++++.+.|
T Consensus 398 g~~~~~~~--~~~~~~~--~~~~~~~~l~~~L~~~Gi~v~g~~~--------~~~~Ri~~~~~~~---~~e~i~~~l~~L 462 (514)
T 3mad_A 398 SLKILGDP--LWVIAVA--SDELNIYQVMEEMAGRGWRLNGLHR--------PPAFHVALTLRHT---EPGVVDRFLADL 462 (514)
T ss_dssp TCEESSCC--SSEEEEE--CSSSCHHHHHHHHHTTTCBCEEETT--------TTEEEEECCGGGG---STTHHHHHHHHH
T ss_pred CeEEeCCC--eEEEEEe--CCCCCHHHHHHHHHhcCCEeccCCC--------CCeEEEEEecCCC---CHHHHHHHHHHH
Confidence 45555432 3355554 3567889999999999998833211 3569998654433 578999999998
Q ss_pred HHHHHHHH
Q 034072 82 DAAVKLTV 89 (104)
Q Consensus 82 ~~~l~~~~ 89 (104)
.+++....
T Consensus 463 ~~~l~~~~ 470 (514)
T 3mad_A 463 QDAVAQVR 470 (514)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88886543
No 127
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=75.13 E-value=15 Score=28.06 Aligned_cols=62 Identities=16% Similarity=0.159 Sum_probs=45.3
Q ss_pred CceeeEeccCC-CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~-gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..++++++... +.+..+..+.|.+.||.+... ..+.+||..+. ..+++|++++.+.|.+++.
T Consensus 375 g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~---------~~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 375 GLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT---------HGDIIRFAPPL----VIKEDELRESIEIINKTIL 437 (439)
T ss_dssp TTEEEEEECCCSSCCHHHHHHHHHHTTEECCBS---------SSSEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred eeEEEEEEecCccHHHHHHHHHHHHCCeEEecC---------CCCEEEEECcc----CCCHHHHHHHHHHHHHHHH
Confidence 46778887542 146788888888899998742 13569997543 4688999999999888764
No 128
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=74.77 E-value=2.9 Score=30.38 Aligned_cols=77 Identities=9% Similarity=0.095 Sum_probs=46.2
Q ss_pred CCeeeeCCCCCceeeEeccCC-CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcc--hhHhhcCCCHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNK-GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT--PALTSRGFVEEDFAKVA 78 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~-gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT--~a~T~RG~~e~dm~~Ia 78 (104)
|+++......++++++++... +.+..++.+.|.+.||.+.....|+... .+-+|+-. ... ....+++++..
T Consensus 279 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~---~~~~r~~i~~~~~---~~~~e~l~~~l 352 (359)
T 3pj0_A 279 GVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSAD---VCAFEVSVGDAFA---EIPAKNLELVF 352 (359)
T ss_dssp TEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETT---EEEEEEECCTTGG---GSCHHHHHHHH
T ss_pred CceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCC---ceEEEEEecCccc---cCCHHHHHHHH
Confidence 455543456778889887543 2346788889999999998553332211 13467632 222 24567777666
Q ss_pred HHHHHH
Q 034072 79 YFFDAA 84 (104)
Q Consensus 79 ~~i~~~ 84 (104)
+.|.++
T Consensus 353 ~~l~~~ 358 (359)
T 3pj0_A 353 RCLEKE 358 (359)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 666543
No 129
>1iqo_A Hypothetical protein MTH1880; beta-alpha, anti-parallel, calcium binding, structural genomics, metal binding protein; NMR {Methanothermobacter} SCOP: d.214.1.1 PDB: 1iqs_A
Probab=74.62 E-value=2 Score=27.91 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=28.7
Q ss_pred CCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCC
Q 034072 8 GGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNT 44 (104)
Q Consensus 8 ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~ 44 (104)
-||.+|+|+. +.+.. +=.++++-|++.|..+|.++
T Consensus 46 ~gT~Sy~v~F-Ld~~~-~ieeIk~eL~~~~a~lN~dS 80 (88)
T 1iqo_A 46 KGTQSNHVLF-LSSYN-SVDEIRKELEEAGAKINHTT 80 (88)
T ss_dssp TTTTCCEEEE-CSCCC-SCHHHHHHHHHHHHCSSCCC
T ss_pred cCCceEEEEE-EeCCC-CHHHHHHHHHHcCccccccH
Confidence 6899999885 44555 88999999999999999764
No 130
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=74.55 E-value=11 Score=29.64 Aligned_cols=58 Identities=16% Similarity=-0.042 Sum_probs=41.1
Q ss_pred CCCCHHH--HHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 22 KGIDGSR--VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 22 ~gi~g~~--a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
.|++..+ +.+.|++.||.+..-.-++... .+..+||+. +..++++++..+.|.+++..
T Consensus 433 ~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~--~~~~~Ris~------~~~~e~l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 433 HQMAPDMFYCMKLLEETGICVVPGSGFGQRE--GTYHFRMTI------LPPVEKLKTVLQKVKDFHIN 492 (498)
T ss_dssp TTSCHHHHHHHHHHHHHCBCCEEGGGTCCCT--TCCBEEEEC------CSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHCCEEEEeCcccCCCC--CCCEEEEEe------CCCHHHHHHHHHHHHHHHHH
Confidence 3666666 5888999999987543333211 245799996 36789999998888887753
No 131
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=74.37 E-value=5.1 Score=30.35 Aligned_cols=84 Identities=11% Similarity=0.106 Sum_probs=49.4
Q ss_pred CCeeeeCCCCCceeeEeccC--CCCCHHHH-----HHHH-hhcCceeccCC---CCCCC-----CCCCCCeeeEcchhHh
Q 034072 2 GYELVSGGTENHLVLVNLKN--KGIDGSRV-----EKVL-EAVHIAANKNT---VPGDV-----SAMVPGGIRMGTPALT 65 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~--~gi~g~~a-----~~~L-e~~gI~vnkn~---lP~d~-----~~~~~sglRlGT~a~T 65 (104)
|++++. ....+.+++++.. .+++..+. .+.| ++.||.+.... .|..+ .......|||+.+.
T Consensus 333 g~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~-- 409 (456)
T 2ez2_A 333 GVPIVE-PVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPR-- 409 (456)
T ss_dssp TCCBCS-SCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCT--
T ss_pred CCcccc-CCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCC--
Confidence 445443 2346888888742 24444443 4455 78898753211 12110 01113579999664
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHH
Q 034072 66 SRGFVEEDFAKVAYFFDAAVKLTV 89 (104)
Q Consensus 66 ~RG~~e~dm~~Ia~~i~~~l~~~~ 89 (104)
...+++|++++.+.|.+++....
T Consensus 410 -~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 410 -RVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp -TTCCHHHHHHHHHHHHHHHHTGG
T ss_pred -CCCCHHHHHHHHHHHHHHHhhhh
Confidence 23689999999999999887543
No 132
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=74.15 E-value=4.3 Score=30.50 Aligned_cols=68 Identities=10% Similarity=0.032 Sum_probs=43.2
Q ss_pred CCceeeEeccCCC-----CCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKG-----IDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 11 d~Hlvlvdl~~~g-----i~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
...++++++.... .+..+..+.| ++.||.+......+.. .+..+||+... .+++|++++.+.|.++
T Consensus 352 ~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~---~~~~iRis~~~-----~~~e~i~~~~~~l~~~ 423 (428)
T 1iay_A 352 AGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQ---EPGWFRVCFAN-----MDDGTVDIALARIRRF 423 (428)
T ss_dssp SSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCS---SSSEEEEECSS-----SCHHHHHHHHHHHHHH
T ss_pred eeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCC---CCCEEEEEEec-----CCHHHHHHHHHHHHHH
Confidence 3557788875421 1344455555 4569998754321111 13579999752 5889999999998887
Q ss_pred HH
Q 034072 85 VK 86 (104)
Q Consensus 85 l~ 86 (104)
+.
T Consensus 424 l~ 425 (428)
T 1iay_A 424 VG 425 (428)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 133
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=74.04 E-value=9.2 Score=28.15 Aligned_cols=58 Identities=24% Similarity=0.249 Sum_probs=41.7
Q ss_pred CceeeEeccCCCCCHHHHHHHHh-hcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLE-AVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le-~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
.+++++++.. +..+..+.|. +.||.+... . .+.+||+.+. ..+++|++++.+.|.+++
T Consensus 336 g~~~~~~~~~---~~~~l~~~l~~~~gi~v~~~----~-----~~~iRi~~~~----~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 336 GLMVGLELKE---KAAPYIARLEKEHRVLALQA----G-----PTVIRFLPPL----VIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp TTEEEEEESS---CSHHHHHHHHHHHCEECEES----S-----TTEEEECCCT----TCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEcC---hHHHHHHHHHHHCCeEEecC----C-----CCEEEEeCCC----CCCHHHHHHHHHHHHHHh
Confidence 4678888753 2566667776 899998752 1 3579998643 457899999888887765
No 134
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=73.73 E-value=11 Score=27.28 Aligned_cols=64 Identities=16% Similarity=0.143 Sum_probs=43.5
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhc-CceeccCCCCCCCCCCCCCeeeEcc-hhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEAV-HIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~~-gI~vnkn~lP~d~~~~~~sglRlGT-~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+++++.+ +.+++..+..+.|.+. ||.+....-|. ..+.+||+. ... .+++|++++.+.|.+++.
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~l~~~~gi~v~~g~~~~-----~~~~iRi~~~~~~----~~~~~i~~~~~~l~~~l~ 386 (393)
T 3kgw_A 321 TITTVTV-PAGYNWRDIVSYVLDHFSIEISGGLGPT-----EERVLRIGLLGYN----ATTENVDRVAEALREALQ 386 (393)
T ss_dssp SEEEEEC-CTTBCHHHHHHHHHHHHCEECBCCCGGG-----TTTEEEEECCGGG----CCHHHHHHHHHHHHHHHH
T ss_pred eEEEEeC-CCCCCHHHHHHHHHHhCCEEEeCCcccC-----CCCEEEEEecccC----CCHHHHHHHHHHHHHHHH
Confidence 4455665 3367888888777655 99988543221 235799995 332 257999999999988875
No 135
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=73.24 E-value=6.1 Score=28.76 Aligned_cols=58 Identities=10% Similarity=0.012 Sum_probs=39.4
Q ss_pred CHHHHHHHHhhcCceeccCC-CCCCC-CCCC----------------CCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 25 DGSRVEKVLEAVHIAANKNT-VPGDV-SAMV----------------PGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 25 ~g~~a~~~Le~~gI~vnkn~-lP~d~-~~~~----------------~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+..++.+.|.+.||.+..-. .|... +... .+.|||.... ..+++|++++.+.|.++++
T Consensus 294 ~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~----~~t~edi~~~~~~l~~~l~ 369 (374)
T 3uwc_A 294 YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHP----YLTEEEINYIIKKVREFYL 369 (374)
T ss_dssp THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCT----TSCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCC----CCCHHHHHHHHHHHHHHHH
Confidence 78889999999999887643 22111 1000 1457776544 3578999999999988875
No 136
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=72.84 E-value=7.6 Score=28.35 Aligned_cols=63 Identities=6% Similarity=0.048 Sum_probs=39.5
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
...++++++.. +..+..+.|.+.||.+....-.. ....+.+||+.. .++|++++.+.+.++++
T Consensus 296 ~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~g~~~~---~~~~~~iRis~~-------~~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 296 RANYLLLRCER---EDIDLQRRLLTQRILIRSCANYP---GLDSRYYRVAIR-------SAAQNERLLAALRNVLT 358 (364)
T ss_dssp SSSEEEEEESC---TTCCHHHHHHTTTEECEECTTST---TCCTTEEEEECC-------CHHHHHHHHHHHHHHC-
T ss_pred CCeEEEEECCC---cHHHHHHHHHHCCcEEeeCcccC---CCCCCEEEEEeC-------CHHHHHHHHHHHHHHhh
Confidence 34567787743 24456667777899987532111 112457999953 47888888888877654
No 137
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=72.66 E-value=6 Score=30.63 Aligned_cols=68 Identities=12% Similarity=0.213 Sum_probs=45.4
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++... |...+++++. ++++.++.+.|.+.||.+... + .+.+|+..... .+++|+ ++.+.+
T Consensus 284 g~~~~~~~-~~~~l~i~~~--~~~~~~l~~~L~~~GI~v~~~---g------~~~iRi~~~~~----~t~e~i-~l~~aL 346 (446)
T 2x3l_A 284 GFEMLQVD-DPLKLLIKYE--GFTGHDIQNWFMNAHIYLELA---D------DYQALAILPLW----HHDDTY-LFDSLL 346 (446)
T ss_dssp TCEEEECS-STTEEEEECT--TSCHHHHHHHHHHTTEEESEE---C------SSCEEEECCCC----CTTCCC-CHHHHH
T ss_pred CCEECcCC-CCeEEEEEeC--CcCHHHHHHHHHHCCCEEEec---C------CCEEEEEeecC----CCHHHH-HHHHHH
Confidence 45565422 4445788875 789999999998889999622 2 14699986532 355777 777766
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 347 ~~~~~ 351 (446)
T 2x3l_A 347 RKIED 351 (446)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 66553
No 138
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=72.55 E-value=6 Score=29.44 Aligned_cols=74 Identities=20% Similarity=0.229 Sum_probs=42.7
Q ss_pred CCeeeeCCCCCceeeEe-ccCCCCCHHHH-HHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVN-LKNKGIDGSRV-EKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAY 79 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvd-l~~~gi~g~~a-~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~ 79 (104)
|++++. +....++|++ +. .+++..+. ++.+++.||.+......+.. ..+.+||+. ..+++|+++..+
T Consensus 316 g~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gv~v~~g~~f~~~---~~~~iRis~------~~~~e~i~~~l~ 384 (400)
T 3asa_A 316 GFEVFG-GEHAPYLWVKPTQ-ANISDRDLFDFFLREYHIAITPGIGFGRS---GSGFVRFSS------LGKREDILAACE 384 (400)
T ss_dssp TCEEEE-CSSSSEEEEECCC-TTCCTTTHHHHHHHHHSEECEEGGGGCGG---GTTCEEEEC------CSCHHHHHHHHH
T ss_pred CCeeeC-CCCceEEEEeccC-CCCCHHHHHHHHHHhCCEEEeChhHhCCC---CCCEEEEEe------eCCHHHHHHHHH
Confidence 455553 2335678888 53 35555444 45557789998753221111 134699983 246888888777
Q ss_pred HHHHHHH
Q 034072 80 FFDAAVK 86 (104)
Q Consensus 80 ~i~~~l~ 86 (104)
.|.+++.
T Consensus 385 ~l~~~~~ 391 (400)
T 3asa_A 385 RLQMAPA 391 (400)
T ss_dssp HHHC---
T ss_pred HHHHHHH
Confidence 7766653
No 139
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=72.28 E-value=10 Score=27.85 Aligned_cols=64 Identities=19% Similarity=0.206 Sum_probs=42.2
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCC------CCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVP------GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP------~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~ 83 (104)
..++++.+. +++..++.+.|.+.||.+....-| +... ..+.+||+....+ +++|++++.+.|.+
T Consensus 335 ~~~~~~~~~--~~~~~~~~~~L~~~gi~v~~g~~~~~~~~~g~~~--~~~~iRis~~~~~----t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 335 IPVVSFAVH--KVPADRVVQRLADNGILAIANTGSRVLDVLGVND--VGGAVTVGLAHYS----TMAEVDQLVRALAS 404 (406)
T ss_dssp CSEEEEEET--TBCHHHHHHHHHHTTEECEECCSCHHHHHHTTTT--TTCCEEEECCTTC----CHHHHHHHHHHHHT
T ss_pred CCEEEEEEC--CcCHHHHHHHHHHCCcEEecCChHHHHHHcCCCC--CCCeEEEEeecCC----CHHHHHHHHHHHHH
Confidence 445666654 468889999999999998754300 0000 1356999976533 67899888777643
No 140
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=71.37 E-value=7 Score=29.10 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=33.9
Q ss_pred CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
+++...+.+.|++.||.+.. ++||+.. +.+++|++++.+.|.+++
T Consensus 364 ~~~~~~~~~ll~~~gv~v~p-------------~~Ri~~~-----~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 364 GLTREQVELLRSEYHIYMTL-------------NGRAAVS-----GLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp CCCHHHHHHHHHHHCEECCT-------------TCEEEGG-----GCCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCEEEcC-------------CCEEEEE-----ecCHhhHHHHHHHHHHHh
Confidence 34678888999999999873 3588764 356788988888887765
No 141
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=71.35 E-value=10 Score=27.62 Aligned_cols=63 Identities=11% Similarity=0.036 Sum_probs=40.9
Q ss_pred CceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+.+++++. .+.+..+..+.| ++.||.+..-..++. +..+||+.. ..++++++..+.|.+++.
T Consensus 306 ~~~~~~~~~-~~~~~~~~~~~ll~~~gi~v~~g~~~~~-----~~~iRi~~~------~~~~~i~~~l~~l~~~l~ 369 (375)
T 3op7_A 306 VSTSFVKIA-VDMPMEDFCLQLLQEHGVLLVPGNRFER-----DGYVRLGFA------CEQETLIKGLEKLSQFLR 369 (375)
T ss_dssp SSCEEEEEC-CSSCHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEECCC------SCHHHHHHHHHHHHHHHG
T ss_pred eEEEeEEcC-CCCCHHHHHHHHHHhCCEEEeChhhhCC-----CCeEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 345566654 355777665555 899999875433222 467999843 344778888777777665
No 142
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=71.20 E-value=6.4 Score=29.47 Aligned_cols=73 Identities=14% Similarity=0.163 Sum_probs=44.4
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ..-+.++++++. .+++..+..+.| ++.||.+......+.. ..+.+||+... .++++++..+.
T Consensus 327 g~~~~~-~~~g~~~~~~~~-~~~~~~~l~~~l~~~~gi~v~~g~~f~~~---~~~~iRis~~~------~~e~l~~~l~~ 395 (404)
T 2o1b_A 327 DLPFVH-AKGGIYVWLETP-PGYDSEQFEQFLVQEKSILVAPGKPFGEN---GNRYVRISLAL------DDQKLDEAAIR 395 (404)
T ss_dssp TCCEEC-CCBSSEEEEECC-TTCCHHHHHHHHHHHHCEECEESGGGCGG---GTTEEEEECCS------CTTHHHHHHHH
T ss_pred CCeecC-CCcceEEEEeCC-CCCCHHHHHHHHHHHCCEEEeCchhhCcC---CCCeEEEEEcC------CHHHHHHHHHH
Confidence 445442 222445788874 456777766665 5789998753222111 13579999763 56788777777
Q ss_pred HHHHH
Q 034072 81 FDAAV 85 (104)
Q Consensus 81 i~~~l 85 (104)
|.+++
T Consensus 396 l~~~l 400 (404)
T 2o1b_A 396 LTELA 400 (404)
T ss_dssp HHGGG
T ss_pred HHHHH
Confidence 66554
No 143
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=70.97 E-value=11 Score=27.70 Aligned_cols=61 Identities=11% Similarity=0.166 Sum_probs=44.7
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+++++++... .+..+..+.|.+.||.+... . .+.|||..+.. .+++|+++..+.|.+++.
T Consensus 333 g~~~~~~~~~~-~~~~~~~~~l~~~Gi~v~~~----~-----~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 333 GFMQGLSLDKS-VKVAKVIQKCQENALLLISC----G-----ENDLRFLPPLI----LQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp TTEEEEEECTT-SCHHHHHHHHHHTTEECEEE----T-----TTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCc-chHHHHHHHHHHCCCEEecC----C-----CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 45778887543 37888888899999998743 1 35799974433 567999998888887764
No 144
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=70.51 E-value=7.8 Score=30.82 Aligned_cols=55 Identities=18% Similarity=0.149 Sum_probs=38.2
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 89 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~~ 89 (104)
...+.+.|++.||.+..-..++. ..+.+||+... .+++|++++.+.|.+++....
T Consensus 472 ~~~~~~ll~~~GV~v~pg~~f~~----~~~~iRls~a~-----~~~e~i~~~i~~L~~~l~~~~ 526 (533)
T 3f6t_A 472 VDFLLKLAEKNGVVLVDGVGFGA----KPGELRVSQAN-----LPTEDYALIGKQVLELLKEYY 526 (533)
T ss_dssp HHHHHHHHHHTTSSSCTTEEECS----STTEEEEESSS-----SCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEeCCcccCC----CCCEEEEEEee-----CCHHHHHHHHHHHHHHHHHHH
Confidence 35566778899998864322222 13579998533 568999999999999887543
No 145
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=70.39 E-value=9.4 Score=28.94 Aligned_cols=60 Identities=12% Similarity=0.139 Sum_probs=40.9
Q ss_pred CCCHHHHHHHHhhcCceeccCCCCCC--CCCCC-----------------CCeeeEcchhHhhcCCCHHHHHHHHHHHHH
Q 034072 23 GIDGSRVEKVLEAVHIAANKNTVPGD--VSAMV-----------------PGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnkn~lP~d--~~~~~-----------------~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~ 83 (104)
|++..++.+.|.+.||.+....-|.- .+... .+.|||+. ...++++|++.+++.|.+
T Consensus 356 ~~~~~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~----~~~~t~~di~~i~~~l~~ 431 (437)
T 3bb8_A 356 GVSRIDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGI----YPGLTHDHLDYVVSKFEE 431 (437)
T ss_dssp SSCHHHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECC----STTCCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecC----CCCCCHHHHHHHHHHHHH
Confidence 67899999999999999876533210 00000 12477763 356789999999999877
Q ss_pred HHH
Q 034072 84 AVK 86 (104)
Q Consensus 84 ~l~ 86 (104)
++.
T Consensus 432 ~~~ 434 (437)
T 3bb8_A 432 FFG 434 (437)
T ss_dssp HTT
T ss_pred HHc
Confidence 653
No 146
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=69.13 E-value=11 Score=28.34 Aligned_cols=59 Identities=10% Similarity=0.136 Sum_probs=43.4
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.++++++.. +.+..+..+.|.+.||.+... .+.|||..+.. .+++|++++.+.|.+++.
T Consensus 364 ~~~~~~~~~-~~~~~~l~~~l~~~Gi~v~~~----------~~~iRis~~~~----~t~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 364 AIGVVETTH-PVNMAALQKFFVEQGVWIRPF----------GKLIYLMPPYI----ILPQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp TEEEEEESS-CBCHHHHHHHHHHTTEECCCB----------TTEEEECCCTT----CCHHHHHHHHHHHHHHTS
T ss_pred EEEEEEECC-cccHHHHHHHHHHCCCEEecc----------CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 478888754 357888888888899998642 24699985443 567999998888877653
No 147
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=67.79 E-value=30 Score=25.97 Aligned_cols=73 Identities=12% Similarity=0.044 Sum_probs=45.9
Q ss_pred CCeeeeCCCCCceeeEeccC----CCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKN----KGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAK 76 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~----~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~ 76 (104)
|++++. ......+++++.. .+.+..+..+.| ++.||.+.....++. ++.+||+. +.+++++++
T Consensus 345 g~~~~~-p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~-----~~~iRis~------~~~~e~i~~ 412 (427)
T 3dyd_A 345 GLRPVR-PSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEY-----PNFIRVVI------TVPEVMMLE 412 (427)
T ss_dssp TEEEEC-CSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTC-----TTEEEEES------CSCHHHHHH
T ss_pred CceecC-CCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCC-----CCeEEEEE------CCCHHHHHH
Confidence 444432 2334566766642 234666655554 789999875433222 35799994 267899999
Q ss_pred HHHHHHHHHH
Q 034072 77 VAYFFDAAVK 86 (104)
Q Consensus 77 Ia~~i~~~l~ 86 (104)
..+.|.++++
T Consensus 413 ~l~~l~~~l~ 422 (427)
T 3dyd_A 413 ACSRIQEFCE 422 (427)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888775
No 148
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=67.55 E-value=8.4 Score=30.14 Aligned_cols=46 Identities=20% Similarity=0.275 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
|++..++ ++|++.||.+- ++| ||..+ |++++.++.+|+.|+++++.
T Consensus 371 gls~e~v-~~L~e~~Vy~~------------~~g-Ris~A-----gl~~~ni~~~a~aI~~vvr~ 416 (420)
T 4h51_A 371 GLSKAQC-EYCQNHNIFIT------------VSG-RANMA-----GLTHETALMLAQTINDAVRN 416 (420)
T ss_dssp CCCHHHH-HHHHHTTEECC------------TTC-EEEGG-----GCCHHHHHHHHHHHHHHHC-
T ss_pred CcCHHHH-HHHHhCCEEEc------------CCC-EEEec-----cCCHHHHHHHHHHHHHHHHH
Confidence 6777776 57888898653 123 98865 57889999999999998864
No 149
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=66.04 E-value=8.1 Score=28.71 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=35.5
Q ss_pred CCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 24 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 24 i~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
++...+.+.|++.||.+.. .+||+... .+++|++++.+.|.++++
T Consensus 365 ~~~~~~~~~l~~~gi~v~~-------------~~Ris~~~-----~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 365 LTPQMVKRLEETHAVYLVA-------------SGRASIAG-----LNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp CCHHHHHHHHHHHCEECCT-------------TSEEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEecc-------------CcEEEEcc-----CCHhHHHHHHHHHHHHHH
Confidence 4677888889999999874 48998642 478999998888887764
No 150
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=65.11 E-value=5 Score=28.73 Aligned_cols=68 Identities=12% Similarity=0.036 Sum_probs=39.8
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhh-cCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEA-VHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~-~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++. ....+++++++. . +..+.|.+ .||.+- +.. +...+.+||+... ..+++|++++.+.
T Consensus 288 ~~~~~~-~~~~~~~~~~~~-----~-~~~~~l~~~~gi~v~----~~~--~~~~~~iRi~~~~----~~~~~~i~~~~~~ 350 (359)
T 1svv_A 288 GIRLAW-PSASNQLFPILE-----N-TMIAELNNDFDMYTV----EPL--KDGTCIMRLCTSW----ATEEKECHRFVEV 350 (359)
T ss_dssp TCCBSS-CCSSSEECBEEE-----H-HHHHHHTTTEECEEE----EEE--TTTEEEEEEECCT----TCCHHHHHHHHHH
T ss_pred CeEEcc-CCccceEEEEcC-----H-HHHHHHHHhcCEEEE----ecc--cCCCceEEEEccC----cCCHHHHHHHHHH
Confidence 455543 234667777763 3 44455544 499982 111 1113569997432 2578999999988
Q ss_pred HHHHHH
Q 034072 81 FDAAVK 86 (104)
Q Consensus 81 i~~~l~ 86 (104)
|.+++.
T Consensus 351 l~~~~~ 356 (359)
T 1svv_A 351 LKRLVA 356 (359)
T ss_dssp HHHC--
T ss_pred HHHHHh
Confidence 887764
No 151
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=68.67 E-value=1.3 Score=32.94 Aligned_cols=66 Identities=11% Similarity=0.159 Sum_probs=41.6
Q ss_pred CceeeEeccCCCCCHHHHHHHH-hhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVL-EAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~L-e~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+.++|+++...+.+..+..+.| ++.||.+.....++. ...+.+||+... .++++++..+.|.+++.
T Consensus 325 ~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~---~~~~~iRi~~~~------~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 325 TYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGS---EGELHARLNIAA------PKSLVEEICKRIVCCLP 391 (392)
Confidence 3344588765456677777777 589999875432221 123569998432 36778777777766653
No 152
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=63.71 E-value=8.2 Score=28.75 Aligned_cols=59 Identities=10% Similarity=0.018 Sum_probs=39.7
Q ss_pred CCHHHHHHHHhhcCceeccCC-CCCC-----------CCCCC------CCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 24 IDGSRVEKVLEAVHIAANKNT-VPGD-----------VSAMV------PGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 24 i~g~~a~~~Le~~gI~vnkn~-lP~d-----------~~~~~------~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
.+..++.+.|.+.||.+.... .|.. ..... .+.|||+... ..+++|++++.+.|.+++
T Consensus 318 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~----~~t~edi~~~~~~l~~~~ 393 (399)
T 2oga_A 318 ERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGP----HLERPQALRVIDAVREWA 393 (399)
T ss_dssp SSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCST----TCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCC----CCCHHHHHHHHHHHHHHH
Confidence 378889999999999997522 1100 00000 1469998644 356899999999998876
Q ss_pred H
Q 034072 86 K 86 (104)
Q Consensus 86 ~ 86 (104)
.
T Consensus 394 ~ 394 (399)
T 2oga_A 394 E 394 (399)
T ss_dssp H
T ss_pred H
Confidence 5
No 153
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=63.22 E-value=19 Score=26.53 Aligned_cols=71 Identities=11% Similarity=0.200 Sum_probs=45.2
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeccCC--CCCCCC------------CCCCCeeeEcchhHhhcCCCHHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNT--VPGDVS------------AMVPGGIRMGTPALTSRGFVEEDFAKVA 78 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~--lP~d~~------------~~~~sglRlGT~a~T~RG~~e~dm~~Ia 78 (104)
+++.+.+ .+.+..++.+.|.+ |.+..-. .|.... ......|||+... ..+++|++++.
T Consensus 318 ~~~~~~~--~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~----~~t~e~i~~~~ 389 (423)
T 3lvm_A 318 NILNVSF--NYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGR----FTTEEEIDYTI 389 (423)
T ss_dssp TEEEEEE--TTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEEECCT----TCCHHHHHHHH
T ss_pred CeEEEEe--CCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCccccCceEEEECCC----CCCHHHHHHHH
Confidence 5566655 46788999999988 5554321 111000 0002579999753 35789999999
Q ss_pred HHHHHHHHHHHHH
Q 034072 79 YFFDAAVKLTVKI 91 (104)
Q Consensus 79 ~~i~~~l~~~~~~ 91 (104)
+.|.+++....+.
T Consensus 390 ~~l~~~~~~~~~~ 402 (423)
T 3lvm_A 390 ELVRKSIGRLRDL 402 (423)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHhhcc
Confidence 9999998766554
No 154
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=61.30 E-value=14 Score=26.37 Aligned_cols=65 Identities=14% Similarity=0.243 Sum_probs=40.9
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCC---------------------CCCCCCCCeeeEcchhHhhcCC
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG---------------------DVSAMVPGGIRMGTPALTSRGF 69 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~---------------------d~~~~~~sglRlGT~a~T~RG~ 69 (104)
..+++.+.+. +..++.+.|++.||.+......+ .......+.|||..... .
T Consensus 244 ~~~~~~~~~~----~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~----~ 315 (331)
T 1pff_A 244 FGSMIAFDVD----GLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCE----N 315 (331)
T ss_dssp CCSEEEEECS----SHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSS----C
T ss_pred CceEEEEEEC----CHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecC----C
Confidence 3567777764 67889999999999764332111 00011246799997753 4
Q ss_pred CHHHHHHHHHHHHH
Q 034072 70 VEEDFAKVAYFFDA 83 (104)
Q Consensus 70 ~e~dm~~Ia~~i~~ 83 (104)
.++|++.+.+.+.+
T Consensus 316 t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 316 VQDIIDDLKQALDL 329 (331)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 56777777766654
No 155
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=60.71 E-value=4.3 Score=30.59 Aligned_cols=59 Identities=10% Similarity=0.044 Sum_probs=40.6
Q ss_pred eeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 14 LVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 14 lvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+|+++.. ...+.+.|++.||.+..-...+. ..+.+||+.. .+++++++..+.|.+++.
T Consensus 327 ~~~~~~~~----~~~~~~~l~~~gV~v~pg~~fg~----~~~~iRis~~------~~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 327 FAWLGTKE----ETDLVSELRRHKVMSRAGERCGS----DKKHVRVSML------SREDVFNVFLERLANMKL 385 (391)
T ss_dssp EEEEEESS----SCCHHHHHHHTTEECEEGGGGTC----CTTEEEEESC------SCHHHHHHHHHHHHSCC-
T ss_pred EEEecCCc----HHHHHHHHHHCCEEEccCCCCCC----CCCEEEEEec------CCHHHHHHHHHHHHHHHH
Confidence 47888753 24678899999999875432222 2357999975 267888888888776653
No 156
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=59.63 E-value=14 Score=27.40 Aligned_cols=53 Identities=11% Similarity=0.014 Sum_probs=35.3
Q ss_pred HHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 30 EKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 30 ~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+.|.+.||.+..-.-|.-..+...+.|||+....+ +++|++++.+.|.+++.
T Consensus 322 ~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~----t~~di~~~~~~l~~~l~ 374 (379)
T 3ke3_A 322 GSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLD----KLTDIDGTVERFEKALD 374 (379)
T ss_dssp SHHHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHH----HHTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEeCCccccccccCcCCEEEEeCCcCC----CHHHHHHHHHHHHHHHH
Confidence 577888899886543222111223567999987655 45888888888877765
No 157
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=58.92 E-value=15 Score=27.10 Aligned_cols=44 Identities=20% Similarity=0.209 Sum_probs=34.7
Q ss_pred CHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 25 ~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+...+.+.|++.||.+.. ++||+... .+++|+++..+.|.++++
T Consensus 366 ~~~~~~~~l~~~gv~v~~-------------~~Ris~~~-----~~~~~i~~~~~~l~~~l~ 409 (412)
T 1ajs_A 366 NPKQVEYLINQKHIYLLP-------------SGRINMCG-----LTTKNLDYVATSIHEAVT 409 (412)
T ss_dssp CHHHHHHHHHTTCEECCT-------------TSEEEGGG-----CCTTTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCEEecC-------------CcEEEeee-----CCHHHHHHHHHHHHHHHH
Confidence 477888899999999872 37998552 478899998888888765
No 158
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=58.48 E-value=19 Score=28.19 Aligned_cols=51 Identities=18% Similarity=0.059 Sum_probs=36.3
Q ss_pred HHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 29 VEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 29 a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
+.+.|++.||.+..-.-++.. ...+.+||... ..++++++..+.|.++++.
T Consensus 443 ~~~ll~~~gI~v~pg~~f~~~--~g~~~iRis~~------~~~e~i~~~i~~l~~~~~~ 493 (500)
T 3tcm_A 443 ALRLLESTGIVVVPGSGFGQV--PGTWHFRCTIL------PQEDKIPAVISRFTVFHEA 493 (500)
T ss_dssp HHHHHHHHCEECEESTTTCCC--TTCCBEEEESC------SCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEEeCcccCCC--CCCCEEEEEEC------CCHHHHHHHHHHHHHHHHH
Confidence 568899999998854443321 11356999965 5678898888888887763
No 159
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=57.17 E-value=15 Score=27.01 Aligned_cols=74 Identities=8% Similarity=0.071 Sum_probs=43.3
Q ss_pred CCeeeeCCCCCceeeEeccCC--CCCH---------HHHHHHHhhcCceeccCCCCCCCC--CCCCCeeeEcchhHhhcC
Q 034072 2 GYELVSGGTENHLVLVNLKNK--GIDG---------SRVEKVLEAVHIAANKNTVPGDVS--AMVPGGIRMGTPALTSRG 68 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~--gi~g---------~~a~~~Le~~gI~vnkn~lP~d~~--~~~~sglRlGT~a~T~RG 68 (104)
|++++. ...+.++++++... +++. ..+++.|++.||.+..-...+... +...+-+||+..
T Consensus 321 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~------ 393 (410)
T 3e2y_A 321 GLKPIV-PDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFI------ 393 (410)
T ss_dssp TCEEEB-CSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEEECC------
T ss_pred CCeecC-CCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEEEEc------
Confidence 445433 34456788887653 2332 555667889999987532111100 011356999832
Q ss_pred CCHHHHHHHHHHHH
Q 034072 69 FVEEDFAKVAYFFD 82 (104)
Q Consensus 69 ~~e~dm~~Ia~~i~ 82 (104)
.+++|+++..+.|.
T Consensus 394 ~~~e~l~~~l~~l~ 407 (410)
T 3e2y_A 394 KKDSTLDAAEEIFR 407 (410)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 38888888777664
No 160
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=55.51 E-value=9.7 Score=27.90 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=32.4
Q ss_pred CHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 25 ~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
+...+.+.|++.||.+.. |+||+... .+++|+++..+.|.++
T Consensus 354 ~~~~~~~~l~~~gv~v~~-------------~~Ris~~~-----~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 354 TKEQVLRLREEFGVYAVA-------------SGRVNVAG-----MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp CHHHHHHHHHHHCEECCT-------------TCEEEGGG-----CCTTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCeeecC-------------CceEEEee-----cCHHHHHHHHHHHHhc
Confidence 457888999999999873 48998652 3778898888877664
No 161
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=54.31 E-value=21 Score=26.45 Aligned_cols=36 Identities=19% Similarity=0.189 Sum_probs=26.8
Q ss_pred eeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchh
Q 034072 14 LVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPA 63 (104)
Q Consensus 14 lvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a 63 (104)
++|+++ .+..+..+.|.+.||.+... .+.+||+...
T Consensus 358 ~~~~~~----~~~~~~~~~l~~~gv~v~~g----------~~~iRis~~~ 393 (413)
T 3t18_A 358 FTFIPT----DKAFDIVKDLEKENIFTIPS----------AKGIRVAICG 393 (413)
T ss_dssp CEEEEC----SCHHHHHHHHHHTTEECEEC----------SSEEEECTTT
T ss_pred EEEeCC----CCHHHHHHHHHhCCEEEecC----------CCceEEEEee
Confidence 456665 37888888999999999742 3579998553
No 162
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=54.21 E-value=15 Score=27.48 Aligned_cols=45 Identities=20% Similarity=0.261 Sum_probs=34.9
Q ss_pred CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
+++...+.+.|++.||.+.. +.||+.. +++++|++++.+.|.+++
T Consensus 375 ~~~~~~~~~~l~~~gI~v~~-------------~~Ris~~-----~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 375 GLTSAQVDRLREEFGIYAVS-------------TGRICVA-----ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp CCCHHHHHHHHHHHCEECCT-------------TSEEEGG-----GCCTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEecC-------------CCeEEEe-----cCCHHHHHHHHHHHHHHh
Confidence 34788899999999999874 2498753 357788999998888765
No 163
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=52.50 E-value=36 Score=26.15 Aligned_cols=62 Identities=19% Similarity=0.148 Sum_probs=39.8
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+.+-+.+...+++ .+..+.|++.||.+-+ +... .+++|+|.. .-.+++|++.+.+.|.++.+
T Consensus 322 ~iv~f~~~~~~~~-~~~~~~L~~~gI~~~~----g~~~---~~~iRiS~~----~~~t~edId~l~~~l~~~~~ 383 (386)
T 3qm2_A 322 MNVPFQLADNTLD-KVFLEESFAAGLHALK----GHRV---VGGMRASIY----NAMPIEGVKALTDFMIDFER 383 (386)
T ss_dssp SEEEEEESSGGGH-HHHHHHHHHTTEECCB----CCTT---TCSEEEECC----TTSCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCcccc-HHHHHHHHHCCCEEeC----CCCC---cCeEEEEcC----CCCCHHHHHHHHHHHHHHHH
Confidence 3445555433556 4555668999998632 2221 257999953 33468999999988877654
No 164
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=51.59 E-value=44 Score=25.77 Aligned_cols=59 Identities=3% Similarity=-0.023 Sum_probs=43.3
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.++++++.. ..+..++.+.|.+.||.+.. . ..-+||..+.. .+++|++++.+.|.+++.
T Consensus 393 ~~~~i~l~~-~~~~~~~~~~l~~~Gv~v~~----~------~~~lRi~p~~~----~t~eei~~~l~~L~~~l~ 451 (457)
T 3tfu_A 393 AIGVIECDR-PVDLAVATPAALDRGVWLRP----F------RNLVYAMPPYI----CTPAEITQITSAMVEVAR 451 (457)
T ss_dssp SCEEEEESS-CCCHHHHHHHHHHTTEECCC----B------TTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECC-cccHHHHHHHHHHCCeEEEe----c------CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 467777754 34678888888888999873 2 14689875433 467999999999988876
No 165
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=50.65 E-value=13 Score=28.03 Aligned_cols=61 Identities=11% Similarity=0.043 Sum_probs=40.3
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..++++++.+.+-... ..+.|.+.||.+.... .+.|||..+.. .+++|+++..+.|.+++.
T Consensus 356 g~~~~i~~~~~~~~~~-~~~~l~~~Gv~v~~~~---------~~~lRis~~~~----~t~e~i~~~l~~l~~~l~ 416 (419)
T 2eo5_A 356 GLAWGLEYNEKKVRDR-IIGESFKRGLLLLPAG---------RSAIRVIPPLV----ISEEEAKQGLDILKKVIK 416 (419)
T ss_dssp TTEEEEECSCHHHHHH-HHHHHHHTTEECEEET---------TTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEecCccHHH-HHHHHHHCCCEEecCC---------CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 3567788743111234 6666778899987531 34699964322 577999999998888765
No 166
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=50.27 E-value=20 Score=27.37 Aligned_cols=47 Identities=30% Similarity=0.298 Sum_probs=35.7
Q ss_pred CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+++...+...|++.||.+.. + + .||+.. +++++++++..+.|.+++.
T Consensus 396 ~~~~~~~~~ll~~~gV~v~~----G-------~-gRis~a-----~~~~~~i~~~~~~l~~~l~ 442 (448)
T 3meb_A 396 GLTPEHVDYLKEKWSIYLVK----A-------G-GRMSMC-----GLTESNCDYVAEAIHDAVT 442 (448)
T ss_dssp CCCHHHHHHHHHHHCEEECS----G-------G-GEEEGG-----GCCTTTHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCCEEEeC----C-------C-cEEEEe-----cCCHHHHHHHHHHHHHHHH
Confidence 34678888888999999953 2 1 398753 3577889999999988876
No 167
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=50.16 E-value=19 Score=27.48 Aligned_cols=61 Identities=11% Similarity=0.180 Sum_probs=38.8
Q ss_pred CceeeEeccCCCCCHH-HHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGS-RVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~-~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
...+|+++.. +.. .+++.|++.||.+..-...+. .++.+||+.. .+++++++..+.|.+++
T Consensus 361 g~f~~~~~~~---~~~~~~~~ll~~~gI~v~pg~~f~~----~~~~~Ris~~------~~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 361 PSYAWVKCEW---EEDKDCYQTFQNGRINTQNGVGFEA----SSRYVRLSLI------KTQDDFDQLMYYLKDMV 422 (427)
T ss_dssp CSEEEEEECS---GGGCSHHHHHHHTTEECEEGGGGTS----CTTEEEEECS------SCHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCC---cHHHHHHHHHHHCCEEEcCCCccCC----CCCEEEEEec------CCHHHHHHHHHHHHHHH
Confidence 3467888854 233 345567889999874322111 2467999975 26778887777776665
No 168
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=50.08 E-value=9.8 Score=27.84 Aligned_cols=67 Identities=12% Similarity=0.142 Sum_probs=29.6
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCC---------------CCCCCCCCCCCeeeEcc-hhHhhcCCCHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNT---------------VPGDVSAMVPGGIRMGT-PALTSRGFVEEDFA 75 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~---------------lP~d~~~~~~sglRlGT-~a~T~RG~~e~dm~ 75 (104)
.+++++.+. +.+..++.+.|. .||.+..-. ++.+. ....+.|||+. ...+ +++|++
T Consensus 316 ~~~~~~~~~--~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~-~~~~~~iRls~~~~~~----t~e~i~ 387 (400)
T 3vax_A 316 PHILNLSFE--DVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLPE-EAASKSLRFSWTPGQA----TDLDVE 387 (400)
T ss_dssp TTEEEEECT--TCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCCH-HHHTSEEEEEEEEC------------
T ss_pred CCEEEEEeC--CCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCCc-cccCceEEEEccCCCC----CHHHHH
Confidence 356666654 578999999999 999886421 00000 00036799996 4333 468888
Q ss_pred HHHHHHHHHHH
Q 034072 76 KVAYFFDAAVK 86 (104)
Q Consensus 76 ~Ia~~i~~~l~ 86 (104)
++.+.|.++++
T Consensus 388 ~~~~~l~~~~~ 398 (400)
T 3vax_A 388 ELARGVAKLKP 398 (400)
T ss_dssp -----------
T ss_pred HHHHHHHHHhc
Confidence 88888877654
No 169
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=48.89 E-value=20 Score=26.68 Aligned_cols=51 Identities=16% Similarity=0.133 Sum_probs=31.6
Q ss_pred HHHHHHhhcCceeccCC-CCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 28 RVEKVLEAVHIAANKNT-VPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 28 ~a~~~Le~~gI~vnkn~-lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+.+.|++.||.+..-. .|. ....+||+... .-..+.+++.+++.+.++|+
T Consensus 318 ~~~~ll~~~gV~v~~g~~~~~-----~~~~lRi~~~~---~~~~~~~l~~l~~~l~~~l~ 369 (374)
T 2aeu_A 318 IGFNLLKNYGIITITVAGMPG-----ASKSLRIDLTS---RDAERIDDNYIIKAIVESIK 369 (374)
T ss_dssp HHHHHHHHHCEECSTTSSSCS-----SCCSEEEETTS---GGGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEecCCCCCC-----CCCeEEEEcCC---chHHHHHHHHHHHHHHHHHH
Confidence 34577888999987532 111 13469999542 22333447888888877765
No 170
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=48.18 E-value=17 Score=30.79 Aligned_cols=48 Identities=23% Similarity=0.128 Sum_probs=34.3
Q ss_pred CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHH
Q 034072 23 GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~ 83 (104)
|++|.++++.|++.||.+.+... . ....+++-|-+++++..+-+.+.+
T Consensus 508 Gi~g~~~~~~L~~~~I~~E~~d~---------~----~vl~l~s~g~~~~~~~~L~~aL~~ 555 (715)
T 3n75_A 508 GIPASIVAKYLDEHGIVVEKTGP---------Y----NLLFLFSIGIDKTKALSLLRALTD 555 (715)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEET---------T----EEEEECCTTCCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHCCCEEEecCC---------C----cEEEEeCCCCCHHHHHHHHHHHHH
Confidence 79999999999999999998622 1 124556667777777766655544
No 171
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=46.76 E-value=17 Score=25.84 Aligned_cols=45 Identities=16% Similarity=0.203 Sum_probs=35.1
Q ss_pred CHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 25 ~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.++++.+.|+++|..+.-...|+..- +..+++++.+.+||.+.|+
T Consensus 201 ~~~~~~~~L~~~g~~v~~~~y~g~gH-----------------~i~~~~l~~~~~fL~k~l~ 245 (246)
T 4f21_A 201 LGHDLSDKLKVSGFANEYKHYVGMQH-----------------SVCMEEIKDISNFIAKTFK 245 (246)
T ss_dssp HHHHHHHHHHTTTCCEEEEEESSCCS-----------------SCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCeEEEEECCCCC-----------------ccCHHHHHHHHHHHHHHhC
Confidence 57888999999999887666666421 2457899999999998875
No 172
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=46.68 E-value=22 Score=26.00 Aligned_cols=48 Identities=13% Similarity=0.144 Sum_probs=35.1
Q ss_pred eeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 14 LVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 14 lvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
++|+++ +...+.+.|++.||.+.. |+||+.. ..+++|++++.+.|.++
T Consensus 345 ~~~~~~-----~~~~~~~~l~~~gi~v~~-------------~~Ris~~-----~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 345 FSRLGA-----TPEQVKRIKEEFGIYMVG-------------DSRINIA-----GLNDNTIPILARAIIEV 392 (394)
T ss_dssp EEECCC-----CHHHHHHHHHHHCEECCT-------------TCEEEGG-----GCCTTTHHHHHHHHHHH
T ss_pred EEeeCC-----CHHHHHHHHHhCCEEecC-------------CCeEEee-----cCCHhhHHHHHHHHHHc
Confidence 455554 456788999999999863 4799954 26788988888777654
No 173
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=46.13 E-value=56 Score=21.83 Aligned_cols=41 Identities=10% Similarity=0.013 Sum_probs=29.1
Q ss_pred CCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 034072 45 VPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSE 94 (104)
Q Consensus 45 lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~~~~~~~ 94 (104)
+-+..++| .-||+ ||+.+++.++++.-+.+-|....++.++
T Consensus 9 ~~~~~~~M--Phlr~-------rgi~~e~v~~lS~~Lid~La~i~~~~~e 49 (122)
T 1u9d_A 9 LYFSSNAM--PHLRF-------RAVEAHIVESLVPTLLNELSSLLSTARN 49 (122)
T ss_dssp TTBTTCCC--CEEEE-------ESSCHHHHHHHHHHHHHHHHHHHTCCGG
T ss_pred eeeccCCC--ceEEE-------CCCCHHHHHHHhHHHHHHHHHHHCCCcc
Confidence 44444443 34777 9999999999999887777766666443
No 174
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=45.94 E-value=43 Score=25.52 Aligned_cols=61 Identities=10% Similarity=0.113 Sum_probs=42.4
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..++++++.... +..+..+.|.+.||.+... . .+.|||..+. ..+++|+++..+.|.+++.
T Consensus 386 g~~~~~~~~~~~-~~~~~~~~l~~~Gv~v~~~----g-----~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~ 446 (449)
T 2cjg_A 386 GLMCAFSLPTTA-DRDELIRQLWQRAVIVLPA----G-----ADTVRFRPPL----TVSTAEIDAAIAAVRSALP 446 (449)
T ss_dssp TTEEEEECSSHH-HHHHHHHHHHHTTEECEEE----T-----TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEECChH-HHHHHHHHHHHCCeEEecC----C-----CCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 447778875322 3456677777789998753 1 2569997433 3578999999999888775
No 175
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=45.94 E-value=43 Score=24.49 Aligned_cols=66 Identities=9% Similarity=0.048 Sum_probs=40.8
Q ss_pred CceeeEeccC-CCCCHHHHHHHHhhcCceeccCCCCCC-CC-C-CC-----------------CCeeeEcchhHhhcCCC
Q 034072 12 NHLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGD-VS-A-MV-----------------PGGIRMGTPALTSRGFV 70 (104)
Q Consensus 12 ~Hlvlvdl~~-~gi~g~~a~~~Le~~gI~vnkn~lP~d-~~-~-~~-----------------~sglRlGT~a~T~RG~~ 70 (104)
-|++.+.+.. .+++..++.+.|.+.||.+....-|.- .. + .. .+.|||... ..++
T Consensus 303 ~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~----~~~t 378 (390)
T 3b8x_A 303 WFGFSFIIKKDSGVIRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNH----QIEL 378 (390)
T ss_dssp CCEEEEEECTTSCCCHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECC----SSCC
T ss_pred cEEEEEEecCcCcccHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCC----CCCC
Confidence 3556666543 267899999999999999884211110 00 0 00 024666643 4578
Q ss_pred HHHHHHHHHHH
Q 034072 71 EEDFAKVAYFF 81 (104)
Q Consensus 71 e~dm~~Ia~~i 81 (104)
++|++.|++.|
T Consensus 379 ~~di~~i~~~l 389 (390)
T 3b8x_A 379 FDEIDYLREVL 389 (390)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 89999988764
No 176
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=45.91 E-value=51 Score=20.32 Aligned_cols=76 Identities=7% Similarity=0.135 Sum_probs=39.2
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCC-CCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG-DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 89 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~-d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~~ 89 (104)
.-.++++|+.-.+.+|.+..+.|.+..-.+---.+-. +.......+++.|....-..-++.+++ .+.|.+++....
T Consensus 49 ~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L---~~~i~~~~~~~~ 125 (141)
T 3cu5_A 49 PPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEI---MDALKQSIQTVL 125 (141)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEECCSTTTCCC------CCCEEECSSCCHHHH---HHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHH---HHHHHHHHHHHH
Confidence 3578999987667899988888876321100000111 112223456788877766666665555 555555555443
No 177
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=45.09 E-value=38 Score=25.45 Aligned_cols=61 Identities=5% Similarity=-0.001 Sum_probs=42.3
Q ss_pred CceeeEeccCCC--C--CHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKG--I--DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~g--i--~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..++++++.... . +..++.+.|.+.||.+... .+.|||..+. ..+++|++++.+.|.+++.
T Consensus 381 g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----------g~~iRis~~~----~~t~~~i~~~l~~l~~~l~ 445 (449)
T 3a8u_X 381 GLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG----------GDTLQFGPTF----NSKPQDLDRLFDAVGEVLN 445 (449)
T ss_dssp TTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEE----------TTEEEECCCT----TCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCcccccccHHHHHHHHHHCCcEEecC----------CCEEEEECCC----cCCHHHHHHHHHHHHHHHH
Confidence 457888875422 1 2235677777789998753 1469998543 3678999999999888775
No 178
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=44.39 E-value=29 Score=25.23 Aligned_cols=56 Identities=14% Similarity=0.094 Sum_probs=37.3
Q ss_pred CHHHHHHHHhhcCceeccCC-CCCCCCC-----------CC------CCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 25 DGSRVEKVLEAVHIAANKNT-VPGDVSA-----------MV------PGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 25 ~g~~a~~~Le~~gI~vnkn~-lP~d~~~-----------~~------~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
+..++.+.|.+.||.+..-. .|....+ +. .+.|||... ..++++|++.+++.+.++
T Consensus 291 ~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~----~~~t~~di~~~~~~l~~~ 364 (373)
T 3frk_A 291 KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIW----YGMKNEEIEYVIDKINAW 364 (373)
T ss_dssp SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCC----TTCCHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCC----CCCCHHHHHHHHHHHHHH
Confidence 78899999999999988543 2322110 00 146888743 356889999998877553
No 179
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=44.38 E-value=43 Score=25.36 Aligned_cols=74 Identities=12% Similarity=0.046 Sum_probs=40.9
Q ss_pred CCeeeeCCCCCceeeEeccCC--------------CCCHHHHHHHH-hhcCceeccCCC-CCCCC-CCCCCeeeEcchhH
Q 034072 2 GYELVSGGTENHLVLVNLKNK--------------GIDGSRVEKVL-EAVHIAANKNTV-PGDVS-AMVPGGIRMGTPAL 64 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~--------------gi~g~~a~~~L-e~~gI~vnkn~l-P~d~~-~~~~sglRlGT~a~ 64 (104)
|++++. .....++|+++... +.+..+..+.| ++.||.+..... ..+.. +.....+||+..
T Consensus 351 g~~~~~-~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~-- 427 (447)
T 3b46_A 351 GLPYTA-PEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVC-- 427 (447)
T ss_dssp TCCEEC-CSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECC--
T ss_pred CCeecC-CCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEe--
Confidence 455442 23356788888643 23555666555 579999864321 11100 011357999974
Q ss_pred hhcCCCHHHHHHHHHHHH
Q 034072 65 TSRGFVEEDFAKVAYFFD 82 (104)
Q Consensus 65 T~RG~~e~dm~~Ia~~i~ 82 (104)
.+++++++..+.|.
T Consensus 428 ----~~~e~l~~~~~~l~ 441 (447)
T 3b46_A 428 ----KDDAYLENAVERLK 441 (447)
T ss_dssp ----SCHHHHHHHHHHGG
T ss_pred ----CCHHHHHHHHHHHH
Confidence 26777766665554
No 180
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=43.75 E-value=60 Score=24.66 Aligned_cols=62 Identities=19% Similarity=0.220 Sum_probs=40.1
Q ss_pred ceeeEeccC-CCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 13 HLVLVNLKN-KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 13 Hlvlvdl~~-~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+.+-+.+.. .+++ .+..+.|++.||.+-. +.. ..+++|+|.... .+++|++.+.+.|.++++
T Consensus 296 ~ivsf~~~~~~~~~-~~~~~~L~~~gI~~~~----g~~---~~g~iRiS~~~~----~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 296 MNVSFNIAKNKDLE-PLFVKEAEEAGMIGLK----GHR---ILGGIRASIYNA----LNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp SEEEEEESSCTTHH-HHHHHHHHHTTEECCB----CCT---TTCSEEEECCTT----SCHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCCchhhh-HHHHHHHHHCCCEEec----CCC---ccCeEEEEccCC----CCHHHHHHHHHHHHHHHH
Confidence 345555543 3445 4666889999998642 222 125799996432 368999999888877654
No 181
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=42.34 E-value=44 Score=24.83 Aligned_cols=66 Identities=14% Similarity=0.204 Sum_probs=43.0
Q ss_pred CceeeEeccCC-------CCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNK-------GIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 12 ~Hlvlvdl~~~-------gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
..++++++.+. .....+..+.|.+.||.+..... +. ..+.|||..+.. .+++|+++..+.|.++
T Consensus 358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~-~~----~~~~lRi~~~~~----~t~~~i~~~l~~l~~~ 428 (433)
T 1zod_A 358 GLLLGVEIVKDRRTKEPADGLGAKITRECMNLGLSMNIVQL-PG----MGGVFRIAPPLT----VSEDEIDLGLSLLGQA 428 (433)
T ss_dssp TTEEEEEEEEETTTTEECTTHHHHHHHHHHHTTEECCEECC-TT----SCCEEEECCCTT----CCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCccccCCChHHHHHHHHHHHHCCCeEeccCC-CC----CCCEEEEECCcC----CCHHHHHHHHHHHHHH
Confidence 34667776431 12366777778789999875421 11 125799974433 5679999999888887
Q ss_pred HH
Q 034072 85 VK 86 (104)
Q Consensus 85 l~ 86 (104)
+.
T Consensus 429 l~ 430 (433)
T 1zod_A 429 IE 430 (433)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 182
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=40.84 E-value=28 Score=25.36 Aligned_cols=43 Identities=21% Similarity=0.342 Sum_probs=31.7
Q ss_pred CCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 24 IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 24 i~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
++...+.+.|++.||.+... + ||+... .+++|++++.+.|.++
T Consensus 354 ~~~~~~~~~l~~~gi~v~~g------------~-Ris~~~-----~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 354 LSAAQVDRLREEFGVYLIAS------------G-RMCVAG-----LNTANVQRVAKAFAAV 396 (397)
T ss_dssp CCHHHHHHHHHTTCEECCTT------------C-EEEGGG-----CCTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEECCC------------C-eEEEEe-----cCHhhHHHHHHHHHhh
Confidence 46788999999999999632 1 887532 3567788888877665
No 183
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=39.80 E-value=88 Score=23.71 Aligned_cols=50 Identities=6% Similarity=0.090 Sum_probs=37.1
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 89 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~~ 89 (104)
..+..+.|.+.||.+.... .-|||..+.. .+++|++++.+.|.++|....
T Consensus 401 ~~~~~~~l~~~Gv~v~~~g----------~~iRi~~~~~----~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 401 GTLCRDIFFRNNLIMRACG----------DHIVSAPPLV----MTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp HHHHHHHHHHTTEECEEET----------TEEEECCCTT----CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEecCC----------CEEEEECCCC----CCHHHHHHHHHHHHHHHHHHH
Confidence 5667777778899987531 4699975443 567999999999998887543
No 184
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=39.55 E-value=51 Score=26.31 Aligned_cols=53 Identities=9% Similarity=0.029 Sum_probs=37.4
Q ss_pred HHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHH
Q 034072 27 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 88 (104)
Q Consensus 27 ~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~ 88 (104)
..+.+.|++.||.+..-...+. ....+||+.. ...+++++++.+.|.+++..-
T Consensus 470 ~~l~~ll~~~gV~v~pG~~F~~----~~~~iRis~~-----~~~~e~i~~~~~~l~~~l~~~ 522 (546)
T 2zy4_A 470 DMLFRIADETGIVLLPGRGFGS----NRPSGRASLA-----NLNEYEYAAIGRALRKMADEL 522 (546)
T ss_dssp HHHHHHHHHHSCCCEESSCTTC----SSCEEEEESS-----SSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeCccccCC----CCCeEEEEec-----cCCHHHHHHHHHHHHHHHHHH
Confidence 4577889999999875432221 1246999974 245899999999998887643
No 185
>4aik_A Transcriptional regulator SLYA; transcription, transcription factor; 1.85A {Yersinia pseudotuberculosis} PDB: 4aih_A 4aij_A 3qpt_A* 3q5f_A*
Probab=38.98 E-value=28 Score=22.82 Aligned_cols=67 Identities=16% Similarity=0.177 Sum_probs=41.1
Q ss_pred HHHHHHhhcCceeccCCCCCCCCC----CCCCeeeEc---------chhHhhcCCCHHHHHHHHHHHHHHHHHHHHHhhh
Q 034072 28 RVEKVLEAVHIAANKNTVPGDVSA----MVPGGIRMG---------TPALTSRGFVEEDFAKVAYFFDAAVKLTVKIKSE 94 (104)
Q Consensus 28 ~a~~~Le~~gI~vnkn~lP~d~~~----~~~sglRlG---------T~a~T~RG~~e~dm~~Ia~~i~~~l~~~~~~~~~ 94 (104)
.+-+.|++.|.+.- ..-|.|.-. ..+.|-.+= ...-...+++++|.+.+.+++.++..+..++++|
T Consensus 65 ~~v~~Le~~GlV~R-~~~~~DrR~~~l~LT~~G~~~~~~~~~~~~~~~~~~~~~l~~ee~~~l~~~L~kl~~nl~~l~~k 143 (151)
T 4aik_A 65 RTLDQLEEKGLITR-HTSANDRRAKRIKLTEQSSPIIEQVDGVISSTRKEILGGISSDEIAVLSGLIDKLEKNIIQLQTK 143 (151)
T ss_dssp HHHHHHHHTTSEEE-EECSSCTTCEEEEECGGGHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHhCCCeEe-ecCCCCCcchhhhcCHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34567788887654 445777421 112232211 1122356899999999999999999888888655
Q ss_pred c
Q 034072 95 T 95 (104)
Q Consensus 95 ~ 95 (104)
.
T Consensus 144 ~ 144 (151)
T 4aik_A 144 L 144 (151)
T ss_dssp -
T ss_pred h
Confidence 4
No 186
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=37.78 E-value=82 Score=23.37 Aligned_cols=54 Identities=9% Similarity=0.084 Sum_probs=33.4
Q ss_pred HHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 27 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 27 ~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.++.+.|.+.||.+....-|... ....-+||..+.. .+++|+++..+.|.+++.
T Consensus 373 ~~~~~~l~~~Gv~v~~~~~~~~~--~~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~ 426 (430)
T 3i4j_A 373 SRIGAAALKRGLITYPGSGAEPN--GRGDHLLLGPPLS----ITAAEVDGLLALLAGALE 426 (430)
T ss_dssp HHHHHHHHHTTEECC-------------CEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecccccCC--CCCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 56777888899998754222221 1134699975433 467999999888888875
No 187
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=35.98 E-value=1.2e+02 Score=23.04 Aligned_cols=50 Identities=20% Similarity=0.153 Sum_probs=36.2
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
..+..+.|.+.||.+.... ...-|||..+.. .+++|+++..+.|.+++..
T Consensus 406 ~~~~~~~l~~~Gv~v~~~~--------~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~~ 455 (460)
T 3gju_A 406 GPQVATALAASGVIGRAMP--------QGDILGFAPPLC----LTREQADIVVSKTADAVKS 455 (460)
T ss_dssp HHHHHHHHHHTTEECEECS--------SSCEEEECCCTT----CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEecCC--------CCCEEEEECCCC----CCHHHHHHHHHHHHHHHHH
Confidence 5567777888899887532 125699975433 5679999999999888864
No 188
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=35.63 E-value=34 Score=27.20 Aligned_cols=34 Identities=15% Similarity=0.141 Sum_probs=24.3
Q ss_pred chhHhhcCCCHHHHHHHH-HHHHHHHHHHHHHhhh
Q 034072 61 TPALTSRGFVEEDFAKVA-YFFDAAVKLTVKIKSE 94 (104)
Q Consensus 61 T~a~T~RG~~e~dm~~Ia-~~i~~~l~~~~~~~~~ 94 (104)
+.++-.||++++|+++|. .=+.++++...++.++
T Consensus 380 ~~~Ll~rG~se~di~ki~g~N~lRvl~~v~~~a~~ 414 (417)
T 2rag_A 380 TARLKAEGYSDADIEAIWSGNVLRIVDAAQAYAKS 414 (417)
T ss_dssp HHHHHHTTCCHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567888999999999996 2333677666555443
No 189
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=35.53 E-value=41 Score=26.14 Aligned_cols=76 Identities=21% Similarity=0.049 Sum_probs=46.0
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++.. ....++.+++.+.+....+..+.|.+.|+.+-.-..+.. ..-+|+... ..-.+++|++++.+.|
T Consensus 394 g~~l~~~-~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g-----~~~lR~~~~---~~~tt~~di~~~~~~i 464 (475)
T 3k40_A 394 RFELAAE-INMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKD-----VYFLRMAIC---SRFTQSEDMEYSWKEV 464 (475)
T ss_dssp TEEESSC-CBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETT-----EEEEEEECC---CTTCCHHHHHHHHHHH
T ss_pred CEEEecC-CceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECC-----EEEEEEEeC---CCCCCHHHHHHHHHHH
Confidence 5666643 456788888764333345666777776765421111111 246999742 2334679999999888
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.++++
T Consensus 465 ~~~~~ 469 (475)
T 3k40_A 465 SAAAD 469 (475)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87665
No 190
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=35.35 E-value=22 Score=20.46 Aligned_cols=16 Identities=6% Similarity=0.187 Sum_probs=14.3
Q ss_pred CCCHHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFDA 83 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~~ 83 (104)
.++++|++.|+++|..
T Consensus 63 ~Lsd~ei~~l~~yl~~ 78 (80)
T 1ayg_A 63 NVTDAEAKQLAQWILS 78 (80)
T ss_dssp CCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 7999999999999854
No 191
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=34.74 E-value=1.1e+02 Score=23.66 Aligned_cols=49 Identities=6% Similarity=0.062 Sum_probs=36.5
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 88 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~ 88 (104)
..++.+.|.+.||.+.... .-|||..+.. .+++|++++.+.|.+++...
T Consensus 404 ~~~~~~~l~~~Gv~v~~~g----------~~iRi~p~~~----~t~e~i~~~l~~l~~~l~~~ 452 (472)
T 3hmu_A 404 GYICRERCFANNLIMRHVG----------DRMIISPPLV----ITPAEIDEMFVRIRKSLDEA 452 (472)
T ss_dssp HHHHHHHHHHTTBCCEEET----------TEEEECCCTT----CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEecC----------CEEEEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 5567777888899987531 4699974443 57799999999999988653
No 192
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=34.40 E-value=1.1e+02 Score=22.96 Aligned_cols=49 Identities=12% Similarity=0.177 Sum_probs=35.7
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 88 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~ 88 (104)
+.+..+.|.+.||.+... ..-|||..+. ..+++|+++..+.|.+++...
T Consensus 395 ~~~~~~~l~~~Gv~~~~~----------~~~iRi~~~~----~~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 395 GYKVSLKMRELGMLTRPL----------GDVIAFLPPL----ASTAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp HHHHHHHHHHTTEECCEE----------TTEEEECCCT----TCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEecc----------CCEEEEECCC----CCCHHHHHHHHHHHHHHHHHH
Confidence 456777777789998533 1469997443 367799999999998888643
No 193
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=34.14 E-value=48 Score=24.67 Aligned_cols=72 Identities=13% Similarity=0.072 Sum_probs=47.2
Q ss_pred eeeEeccCCCCCHHHHHHHHhhcCce---eccCC----CCCCC-CCCCCCeeeE-cchh---------HhhcCCCHHHHH
Q 034072 14 LVLVNLKNKGIDGSRVEKVLEAVHIA---ANKNT----VPGDV-SAMVPGGIRM-GTPA---------LTSRGFVEEDFA 75 (104)
Q Consensus 14 lvlvdl~~~gi~g~~a~~~Le~~gI~---vnkn~----lP~d~-~~~~~sglRl-GT~a---------~T~RG~~e~dm~ 75 (104)
-+.|.+|....-.++..+.|++.||. ++.-. +|... ......-+|+ |.+. ......++++++
T Consensus 151 ~~AvE~Rh~sW~~~~~~~lL~~~~v~~V~~D~~~~~~~~P~~~~~t~~~~yvRlHG~~~~~w~~~~~~~y~~~Y~~~eL~ 230 (273)
T 1vpq_A 151 ELAVEFRHYSWDREETYEFLRNHGITFVVVDEPKLPGLFPYRPITTTDYAYFRFHGRNERWFEAEGEERYDYLYSEEELK 230 (273)
T ss_dssp CEEEECCBGGGCSHHHHHHHHHHTCEEEEEECCCCTTBCCCCCCCSSSEEEEEECCCCTTTTTCCGGGTTCCCCCHHHHH
T ss_pred CEEEEccCchhccHHHHHHHHHcCcEEEEeCCCCCCCCCCcccccCCCceEEEEeCCCccccccccccccccCCCHHHHH
Confidence 34567776655556899999999986 33222 44321 1111234888 7666 566689999999
Q ss_pred HHHHHHHHHH
Q 034072 76 KVAYFFDAAV 85 (104)
Q Consensus 76 ~Ia~~i~~~l 85 (104)
.+|+.|.+..
T Consensus 231 ~wa~~i~~~~ 240 (273)
T 1vpq_A 231 TLFEDVVELS 240 (273)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987643
No 194
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=33.08 E-value=54 Score=26.03 Aligned_cols=30 Identities=20% Similarity=0.365 Sum_probs=21.6
Q ss_pred chhHhhcCCCHHHHHHHH--HHHHHHHHHHHHH
Q 034072 61 TPALTSRGFVEEDFAKVA--YFFDAAVKLTVKI 91 (104)
Q Consensus 61 T~a~T~RG~~e~dm~~Ia--~~i~~~l~~~~~~ 91 (104)
+.++-.||++++|++.|. +++ ++++...++
T Consensus 341 ~~~L~~rG~se~di~ki~g~N~l-Rvl~~ve~~ 372 (400)
T 3id7_A 341 IAELLDRGWSQSDLAKLTWKNAV-RVLDAAEDV 372 (400)
T ss_dssp HHHHHHTTCCHHHHHHHHTHHHH-HHHHHHHHH
T ss_pred HHHHhhcCCCHHHHHHHHHHhHH-HHHHHHHHH
Confidence 577889999999999986 333 555554444
No 195
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=31.29 E-value=38 Score=24.53 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=38.3
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEc--chhHhhcCCCHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMG--TPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlG--T~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
-.+|++.+.... .-..+.+.++ .||.||...-|-..+-..|+-+|-| +.+++|-|.++.=-+.|-+.|.+.
T Consensus 92 adLVIaAT~d~~-~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~~ 164 (223)
T 3dfz_A 92 VFFIVVATNDQA-VNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSSN 164 (223)
T ss_dssp CSEEEECCCCTH-HHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCHH-HHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 345555432222 2234444455 8999999888877655556656655 345677888776665555555443
No 196
>3c1q_A General secretion pathway protein F; type 2 secretion system, T2SS, T4PB, inner membrane membrane, transmembrane, transport protein; HET: MSE PE5; 1.70A {Vibrio cholerae} PDB: 2vmb_A* 2vma_A*
Probab=31.14 E-value=54 Score=20.50 Aligned_cols=34 Identities=15% Similarity=0.344 Sum_probs=20.6
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHhhhccCccccc
Q 034072 67 RGFVEEDFAKVAYFFDAAVKLTVKIKSETQGSYQCF 102 (104)
Q Consensus 67 RG~~e~dm~~Ia~~i~~~l~~~~~~~~~~~~~~~~~ 102 (104)
-|--++-+..+|++..+-.+...++.... .||||
T Consensus 89 sG~L~~~L~~la~~~e~~~~~~~~~~~al--~YP~f 122 (123)
T 3c1q_A 89 SGHLDSVLERLADYAENRQKMRSKLQQAS--ENLYF 122 (123)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHHHHHHTTC-------
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccc
Confidence 35556777888888887777777776555 78887
No 197
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=31.12 E-value=53 Score=24.41 Aligned_cols=10 Identities=20% Similarity=0.624 Sum_probs=8.1
Q ss_pred CCeeeeCCCC
Q 034072 2 GYELVSGGTE 11 (104)
Q Consensus 2 G~~vv~ggTd 11 (104)
+.+++.||||
T Consensus 26 ~a~~laGGT~ 35 (288)
T 1t3q_C 26 DARIIAGGQS 35 (288)
T ss_dssp TCEEESSCTT
T ss_pred CCEEEeCchh
Confidence 4678889998
No 198
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=31.10 E-value=79 Score=19.01 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=41.5
Q ss_pred CceeeEeccCCCCCHHHHHHHHhh--cCceeccCCCCC-CCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEA--VHIAANKNTVPG-DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~--~gI~vnkn~lP~-d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
-.++++|+.-.+.+|.+..+.+.+ ..-.+---.+-. +........++.|....-.+-+..+++ .+.|.+++..
T Consensus 52 ~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l---~~~i~~~~~~ 127 (142)
T 3cg4_A 52 SGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDL---IEKTTFFMGF 127 (142)
T ss_dssp CEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHH---HHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHH---HHHHHHHHHH
Confidence 468999987667799998888876 221110000111 111222356777877776666666554 5555555543
No 199
>4hbl_A Transcriptional regulator, MARR family; HTH, transcription factor, DNA binding; 2.50A {Staphylococcus epidermidis}
Probab=31.09 E-value=59 Score=20.61 Aligned_cols=28 Identities=11% Similarity=0.317 Sum_probs=23.0
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 034072 66 SRGFVEEDFAKVAYFFDAAVKLTVKIKS 93 (104)
Q Consensus 66 ~RG~~e~dm~~Ia~~i~~~l~~~~~~~~ 93 (104)
..+++++|++.+.+++.++.....++.+
T Consensus 121 ~~~l~~~e~~~l~~~l~~l~~~l~~~~~ 148 (149)
T 4hbl_A 121 PQEFDTTEYDETKYVFEELEQTLKHLIE 148 (149)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4589999999999999988887776643
No 200
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=31.08 E-value=1.6e+02 Score=21.76 Aligned_cols=46 Identities=9% Similarity=-0.010 Sum_probs=33.3
Q ss_pred HHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 27 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 27 ~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
.++.+.|.+.||.+... . ...+|+. -..+++|++++.+.|.+++..
T Consensus 384 ~~~~~~l~~~Gv~v~~~----~-----~~~~rl~------~~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 384 GKFFKLMLQEGVNLAPS----K-----YEAWFLT------TEHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp HHHHHHHHHTTEECCSS----T-----TCCEECC------TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEeec----C-----CCcEEEe------cccCHHHHHHHHHHHHHHHHH
Confidence 55667777889988633 1 1358883 246889999999999888864
No 201
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=30.81 E-value=1e+02 Score=23.10 Aligned_cols=65 Identities=15% Similarity=0.242 Sum_probs=38.9
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCC---------CCC------------CCCCCCeeeEcchhHhhcCCC
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVP---------GDV------------SAMVPGGIRMGTPALTSRGFV 70 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP---------~d~------------~~~~~sglRlGT~a~T~RG~~ 70 (104)
..++.+++.. ....+.+.|++.||.+.....- ... .....+-|||....
T Consensus 309 g~~~~~~~~~---~~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~------- 378 (404)
T 1e5e_A 309 GSMITFILKS---GFEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI------- 378 (404)
T ss_dssp CSEEEEEETT---HHHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-------
T ss_pred ceEEEEEeCC---CHHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-------
Confidence 4577778752 1357888999999854432211 100 01113569998543
Q ss_pred HHHHHHHHHHHHHHHHH
Q 034072 71 EEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 71 e~dm~~Ia~~i~~~l~~ 87 (104)
+|++++-+.|.+++..
T Consensus 379 -e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 379 -EDADELIADFKQGLDA 394 (404)
T ss_dssp -SCHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHH
Confidence 7777777777777663
No 202
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=30.72 E-value=1.4e+02 Score=23.02 Aligned_cols=49 Identities=4% Similarity=0.064 Sum_probs=35.4
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 88 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~ 88 (104)
..++.+.|.+.||.+... .+-|||..+.. .+++|++++.+.|.++|...
T Consensus 406 ~~~~~~~l~~~Gv~v~~~----------g~~iRi~p~l~----~t~e~i~~~l~~l~~~l~~~ 454 (476)
T 3i5t_A 406 TLKIDERCFELGLIVRPL----------GDLCVISPPLI----ISRAQIDEMVAIMRQAITEV 454 (476)
T ss_dssp HHHHHHHHHHTTEECEEE----------TTEEEECCCTT----CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEec----------CCEEEEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 455666777789998753 14599974433 57799999999999988643
No 203
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=30.49 E-value=82 Score=23.65 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=36.8
Q ss_pred HHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 27 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 27 ~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+..+.|.+.||.+....-|... ..+.|||..+.. .+++|+++..+.|.+++.
T Consensus 398 ~~~~~~l~~~Gv~~~~~~~~~~~---~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 398 ASVVNACKEKGLIIGRNGMTTAG---YNNILTLAPPLV----ISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp HHHHHHHHHTTEECEECTTSSTT---CCCEEEECCCTT----CCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCcEEeecCcccCC---CCCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 35667777889999865433221 146799985443 567999999988887764
No 204
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=30.47 E-value=53 Score=23.84 Aligned_cols=62 Identities=10% Similarity=0.076 Sum_probs=39.0
Q ss_pred ceeeEeccCCCCCHHHHHHHHhhcCceeccCCC-CCCC-CCC-------------CCCeeeEcchhHhhcCCCHHHHHHH
Q 034072 13 HLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTV-PGDV-SAM-------------VPGGIRMGTPALTSRGFVEEDFAKV 77 (104)
Q Consensus 13 Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~l-P~d~-~~~-------------~~sglRlGT~a~T~RG~~e~dm~~I 77 (104)
|++.+.+. +..++.+.|.+.||.+..-.- |-.. +++ ..+.|||.. -..++++|++.|
T Consensus 282 ~~~~~~~~----~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~----~~~~t~~~i~~v 353 (367)
T 3nyt_A 282 AQYTVRMD----NRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPM----HPYLDTASIKII 353 (367)
T ss_dssp SSEEEECS----SHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECC----CTTCCHHHHHHH
T ss_pred EEEEEEeC----CHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccC----CCCCCHHHHHHH
Confidence 45555543 788999999999998875432 2211 111 123456653 346788999999
Q ss_pred HHHHH
Q 034072 78 AYFFD 82 (104)
Q Consensus 78 a~~i~ 82 (104)
++.|.
T Consensus 354 ~~~~~ 358 (367)
T 3nyt_A 354 CAALT 358 (367)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88774
No 205
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=29.89 E-value=74 Score=24.56 Aligned_cols=61 Identities=7% Similarity=0.102 Sum_probs=39.9
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.-++.+++.... ...++.+.|.+.||.+... . .+.|||..+.. .+++|+++..+.|.+++.
T Consensus 409 g~~~~~~~~~~~-~~~~~~~~l~~~Gv~~~~~----g-----~~~iRi~~~~~----~t~e~i~~~~~~l~~~l~ 469 (472)
T 1ohv_A 409 GTFCSFDTPDES-IRNKLISIARNKGVMLGGC----G-----DKSIRFRPTLV----FRDHHAHLFLNIFSDILA 469 (472)
T ss_dssp TTEEEEECSSHH-HHHHHHHHHHHTTEECEEE----T-----TTEEEECCCTT----CCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCChh-HHHHHHHHHHHCCeEEecC----C-----CCEEEEECCCC----CCHHHHHHHHHHHHHHHH
Confidence 346667764211 2345556666679988642 1 35799965433 578999999999988775
No 206
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=29.77 E-value=49 Score=24.72 Aligned_cols=53 Identities=11% Similarity=0.078 Sum_probs=36.6
Q ss_pred CHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHH
Q 034072 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLT 88 (104)
Q Consensus 25 ~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~ 88 (104)
...+..+.|.+.||.+.... . ..+.+||..+.. .+++|+++..+.|.+++...
T Consensus 373 ~~~~~~~~l~~~Gv~v~~~~----~---~~~~iRi~~~~~----~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 373 ETAKLIYRAYQLGLVVYYVG----M---NGNVLEFTPPLT----ITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp HHHHHHHHHHHHTEECEEES----T---TSCEEEECCCTT----CCHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHCCcEEeecC----C---CCCEEEEECCCC----CCHHHHHHHHHHHHHHHHHH
Confidence 35566677777799986541 1 135699975432 46799999999998888644
No 207
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=29.27 E-value=1e+02 Score=22.98 Aligned_cols=61 Identities=5% Similarity=-0.013 Sum_probs=40.7
Q ss_pred CceeeEeccCCC------------CCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHH
Q 034072 12 NHLVLVNLKNKG------------IDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAY 79 (104)
Q Consensus 12 ~Hlvlvdl~~~g------------i~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~ 79 (104)
..++++++.... ....+..+.|.+.||.+... .. ..+|+. -..+++|++++.+
T Consensus 358 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----~~-----~~~~~~------~~~t~e~i~~~l~ 422 (434)
T 2epj_A 358 ESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPS----NL-----EAVFTG------LPHQGEALEIAVE 422 (434)
T ss_dssp TTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSS----TT-----SCEECC------TTCSHHHHHHHHH
T ss_pred eeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEecc----CC-----CcEEEe------ccCCHHHHHHHHH
Confidence 357788875311 13566777787889998743 11 125553 2468999999999
Q ss_pred HHHHHHHH
Q 034072 80 FFDAAVKL 87 (104)
Q Consensus 80 ~i~~~l~~ 87 (104)
.|.+++..
T Consensus 423 ~l~~~l~~ 430 (434)
T 2epj_A 423 GLRSSLKT 430 (434)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888764
No 208
>3cu4_A Cytochrome C family protein; monoheme cytochrome, electron transport; HET: HEM; 1.30A {Geobacter sulfurreducens}
Probab=28.70 E-value=25 Score=20.32 Aligned_cols=16 Identities=19% Similarity=0.110 Sum_probs=13.9
Q ss_pred CCCHHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFDA 83 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~~ 83 (104)
.++++|+..|+.+|..
T Consensus 67 ~ls~~ei~~l~~yi~~ 82 (85)
T 3cu4_A 67 MIPPADALKIGEYVVA 82 (85)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4899999999999864
No 209
>2kts_A Heat shock protein HSLJ; NP_415897.1, JCSG, stress response, structural genomics, PSI protein structure initiative; NMR {Escherichia coli}
Probab=28.57 E-value=40 Score=21.37 Aligned_cols=36 Identities=11% Similarity=0.076 Sum_probs=30.0
Q ss_pred CCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHHH
Q 034072 54 PGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTV 89 (104)
Q Consensus 54 ~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~~ 89 (104)
..-|+||-.+.|++-+.+++|.++-+.+.++|....
T Consensus 55 ~~~l~~~~~~sT~maC~~~~m~~~E~~~~~~L~~~~ 90 (117)
T 2kts_A 55 NGELTAKGLAMTRMMCANPQLNELDNTISEMLKEGA 90 (117)
T ss_dssp SSEECCSSEEECCCCCSSHHHHHHHHHHHHHHHHCE
T ss_pred CCEEEECchheEccCCCCHHHHHHHHHHHHHhcCCc
Confidence 456999999999999988999988888888887543
No 210
>1f1f_A Cytochrome C6; heme, protein structure, cyanobacteria, photosynthesis, electron transport; HET: HEM; 2.70A {Arthrospira maxima} SCOP: a.3.1.1 PDB: 1kib_A*
Probab=27.64 E-value=41 Score=19.23 Aligned_cols=16 Identities=13% Similarity=0.117 Sum_probs=14.0
Q ss_pred CCHHHHHHHHHHHHHH
Q 034072 69 FVEEDFAKVAYFFDAA 84 (104)
Q Consensus 69 ~~e~dm~~Ia~~i~~~ 84 (104)
++++|+..|+.+|...
T Consensus 69 ls~~ei~~l~~yl~~~ 84 (89)
T 1f1f_A 69 LSPLQIEDVAAYVVDQ 84 (89)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8999999999999653
No 211
>3r8n_M 30S ribosomal protein S13; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_M* 3j18_M 3oaq_M 3ofa_M 3ofx_M 3ofo_M 3r8o_M 4a2i_M 4gd1_M 4gd2_M 3i1m_M 1vs7_M* 3e1a_F 3e1c_F 1vs5_M 3i1o_M 3i1q_M 3i1s_M 3i1z_M 3i21_M ...
Probab=27.49 E-value=91 Score=20.54 Aligned_cols=22 Identities=27% Similarity=0.379 Sum_probs=19.1
Q ss_pred CCCCCHHHHHHHHhhcCceecc
Q 034072 21 NKGIDGSRVEKVLEAVHIAANK 42 (104)
Q Consensus 21 ~~gi~g~~a~~~Le~~gI~vnk 42 (104)
=+||.-..|...|+++||.-|+
T Consensus 21 I~GIG~~~A~~I~~~~gid~~~ 42 (114)
T 3r8n_M 21 IYGVGKTRSKAILAAAGIAEDV 42 (114)
T ss_dssp STTCCHHHHHHHHHHTTCCTTC
T ss_pred hcCcCHHHHHHHHHHcCcCccc
Confidence 3699999999999999997764
No 212
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=27.47 E-value=41 Score=25.77 Aligned_cols=41 Identities=22% Similarity=0.323 Sum_probs=29.9
Q ss_pred CCCCCeeeEcch-hHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 034072 51 AMVPGGIRMGTP-ALTSRGFVEEDFAKVAYFFDAAVKLTVKI 91 (104)
Q Consensus 51 ~~~~sglRlGT~-a~T~RG~~e~dm~~Ia~~i~~~l~~~~~~ 91 (104)
+..||.+..... ..+-|-|+++|+++|-+-..++...+++.
T Consensus 129 ~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~a 170 (363)
T 3l5l_A 129 TIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVDAARRARDA 170 (363)
T ss_dssp CEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 344676665322 34568899999999999998888887764
No 213
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=27.44 E-value=1.7e+02 Score=21.70 Aligned_cols=27 Identities=22% Similarity=0.437 Sum_probs=21.5
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceeccC
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANKN 43 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn 43 (104)
.+++-+.+ + +...+.+.|++.||.+ .-
T Consensus 328 ~~iv~~~~---~-~~~~~~~~l~~~~i~~-~~ 354 (412)
T 2cb1_A 328 GPILTLDL---G-DLERASRFLGAIRLLK-AA 354 (412)
T ss_dssp CSEEEEEC---S-SHHHHHHHHHHCSSEE-CS
T ss_pred ceEEEEEe---C-CHHHHHHHHHhCCeee-ec
Confidence 34677776 4 8899999999999998 54
No 214
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=27.19 E-value=94 Score=23.87 Aligned_cols=75 Identities=13% Similarity=0.119 Sum_probs=44.9
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCH----HHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcc-hhHhhcCCCHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDG----SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGT-PALTSRGFVEEDFAK 76 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g----~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT-~a~T~RG~~e~dm~~ 76 (104)
|++++.. .+..++.+++.+.+... .+..+.|.+.|+.+-....+.. ...+||.. ... .+++|+++
T Consensus 415 ~~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g-----~~~lRis~~~~~----~t~edi~~ 484 (497)
T 2qma_A 415 QFELLAE-PSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDG-----KTALKFTILNPC----LTTSDFES 484 (497)
T ss_dssp TEEECSC-CSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETT-----EEEEEEECCCTT----CCHHHHHH
T ss_pred CeEEEcC-CCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECC-----EEEEEEEecCCC----CCHHHHHH
Confidence 5566542 45568888876543222 3455677778887742111111 23599985 333 46789998
Q ss_pred HHHHHHHHHH
Q 034072 77 VAYFFDAAVK 86 (104)
Q Consensus 77 Ia~~i~~~l~ 86 (104)
+.+.|.+++.
T Consensus 485 ~~~~l~~~~~ 494 (497)
T 2qma_A 485 LLSKINMLAV 494 (497)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 215
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=26.62 E-value=39 Score=25.91 Aligned_cols=41 Identities=20% Similarity=0.215 Sum_probs=30.6
Q ss_pred CCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 034072 51 AMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKI 91 (104)
Q Consensus 51 ~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~~~~ 91 (104)
+..||.+.......+-|-|+++|+++|-+-..++...+++.
T Consensus 115 ~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~a 155 (343)
T 3kru_A 115 VVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLA 155 (343)
T ss_dssp CEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhcccc
Confidence 34466666544344568899999999999998888887764
No 216
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=26.00 E-value=1.4e+02 Score=23.63 Aligned_cols=48 Identities=8% Similarity=0.176 Sum_probs=36.7
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
+..+.+.|.+.|+.+... ...|||- |+++ ++++|+.++.+.+.++|+.
T Consensus 420 ~~~~~~~~~~~Gll~~~~----------g~~i~l~-PPL~---it~~eid~~~~~l~~al~~ 467 (473)
T 4e3q_A 420 SERIANTCTDLGLICRPL----------GQSVVLC-PPFI---LTEAQMDEMFDKLEKALDK 467 (473)
T ss_dssp HHHHHHHHHHTTEECEEE----------TTEEEEC-CCTT---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEEec----------CCEEEEe-CCCC---CCHHHHHHHHHHHHHHHHH
Confidence 556777888889988643 1358886 6665 6899999999999998864
No 217
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=25.97 E-value=73 Score=24.60 Aligned_cols=76 Identities=17% Similarity=0.092 Sum_probs=44.8
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFF 81 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i 81 (104)
|++++. ..+.+++.+++++.+....+..+.|.+.|+.+-. |.... ...-+|+... ..-.+++|++++.+.|
T Consensus 401 g~~~~~-~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~---~~~~~--g~~~lR~~~~---~~~tt~~di~~~~~~i 471 (481)
T 4e1o_A 401 SFEIPA-KRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLI---PATIQ--DKLIIRFTVT---SQFTTRDDILRDWNLI 471 (481)
T ss_dssp TEECCS-CCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCE---EEEET--TEEEEEEECC---CTTCCHHHHHHHHHHH
T ss_pred CeEEec-CCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEE---eeEEC--CEEEEEEEeC---CCCCCHHHHHHHHHHH
Confidence 566653 3467888888765332345666667666744311 21100 1235998843 2234679999998888
Q ss_pred HHHHH
Q 034072 82 DAAVK 86 (104)
Q Consensus 82 ~~~l~ 86 (104)
.+++.
T Consensus 472 ~~~~~ 476 (481)
T 4e1o_A 472 RDAAT 476 (481)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 218
>2vqe_M 30S ribosomal protein S13, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: a.156.1.1 PDB: 1gix_P* 1hnw_M* 1hnx_M* 1hnz_M* 1hr0_M 1ibk_M* 1ibl_M* 1ibm_M 1j5e_M 1jgo_P* 1jgp_P* 1jgq_P* 1mj1_P* 1ml5_P* 1n32_M* 1n33_M* 1n34_M 1n36_M 1xmo_M* 1xmq_M* ...
Probab=25.85 E-value=30 Score=23.42 Aligned_cols=42 Identities=19% Similarity=0.344 Sum_probs=33.0
Q ss_pred cCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHH
Q 034072 20 KNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 20 ~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~ 83 (104)
.=+||.-..|...|+++||.-|+ |+| -++++|...|-++|.+
T Consensus 21 ~I~GIG~~~A~~I~~~~gi~~~~---------------r~~-------~Lt~~ei~~l~~~i~~ 62 (126)
T 2vqe_M 21 YIYGIGKARAKEALEKTGINPAT---------------RVK-------DLTEAEVVRLREYVEN 62 (126)
T ss_dssp TSSSCCSHHHHHHTTTTTCCTTS---------------BGG-------GCCHHHHHHHHHHHHT
T ss_pred ccccccHHHHHHHHHHcCCCccc---------------ccC-------cCCHHHHHHHHHHHHH
Confidence 33689999999999999987653 343 3778999999888875
No 219
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=25.47 E-value=62 Score=25.82 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=44.9
Q ss_pred EeccCCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhH----hhcCCCHHHH-HHHHHHHHHHHHHHHHH
Q 034072 17 VNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPAL----TSRGFVEEDF-AKVAYFFDAAVKLTVKI 91 (104)
Q Consensus 17 vdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~----T~RG~~e~dm-~~Ia~~i~~~l~~~~~~ 91 (104)
+.-.+..++ .+|.+.|++.||.+.+..+-+ ..|+-.+..|+ ....+++++. +++.++|.+++....+.
T Consensus 316 ~EgAN~p~t-~~A~~~L~~~Gi~~~PD~~aN------aGGV~~S~~E~~qn~~~~~w~~eev~~~l~~im~~~~~~v~~~ 388 (419)
T 3aoe_E 316 VEVANFGLN-PEAEAYLLGKGALVVPDLLSG------GGGLLASYLEWVQDLNMFFWSPEEVRERFETRVARVVDAVCRR 388 (419)
T ss_dssp EECSTTCBC-HHHHHHHHHHTCEEECHHHHT------CHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCcCC-HHHHHHHHHCCCEEECHHHHh------CCCchhhHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334445 789999999999987532211 35677666676 3467777664 45666666666666555
Q ss_pred hhhc
Q 034072 92 KSET 95 (104)
Q Consensus 92 ~~~~ 95 (104)
.++.
T Consensus 389 a~~~ 392 (419)
T 3aoe_E 389 AERG 392 (419)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4444
No 220
>3dmi_A Cytochrome C6; electron transport, transit peptide; HET: HEM; 1.50A {Phaeodactylum tricornutum} SCOP: a.3.1.1
Probab=25.44 E-value=27 Score=20.03 Aligned_cols=15 Identities=33% Similarity=0.476 Sum_probs=13.6
Q ss_pred CCHHHHHHHHHHHHH
Q 034072 69 FVEEDFAKVAYFFDA 83 (104)
Q Consensus 69 ~~e~dm~~Ia~~i~~ 83 (104)
++++|+..|+.+|..
T Consensus 67 ls~~ei~~l~~yl~~ 81 (88)
T 3dmi_A 67 LSDEEIANVAAYVLA 81 (88)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 899999999999965
No 221
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=25.19 E-value=43 Score=25.46 Aligned_cols=40 Identities=10% Similarity=0.275 Sum_probs=29.4
Q ss_pred CCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 034072 52 MVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKI 91 (104)
Q Consensus 52 ~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~~~~ 91 (104)
..||.+.......+-|-|+++|+++|-+-..++...+++.
T Consensus 117 ~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~a 156 (340)
T 3gr7_A 117 IAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEA 156 (340)
T ss_dssp EESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 3456665543334568899999999999988888877765
No 222
>2gu0_A Nonstructural protein 2; NSP2, HIT motif, bristol, viral protein; 2.80A {Human rotavirus C}
Probab=24.83 E-value=43 Score=25.91 Aligned_cols=72 Identities=11% Similarity=0.188 Sum_probs=44.7
Q ss_pred CCceeeEeccCCCCCHHHHHHHHhhcCceeccCCCCCCC---C--CCCCCeeeEcchhHhhcCCCH--HHHHHHHHHHHH
Q 034072 11 ENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPGDV---S--AMVPGGIRMGTPALTSRGFVE--EDFAKVAYFFDA 83 (104)
Q Consensus 11 d~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnkn~lP~d~---~--~~~~sglRlGT~a~T~RG~~e--~dm~~Ia~~i~~ 83 (104)
+.-..++.. +-.++.. +--+.|-=+-..-|.|. + |.+---=|+-|.. +|||.- +-+.++|.+|++
T Consensus 14 ~d~~~f~p~-----n~~AIk~-mL~aKvdK~d~d~~ydtivYG~aPpP~fkkRfnt~~--srGmnfet~mf~kva~ll~e 85 (312)
T 2gu0_A 14 EDKVVWYPI-----NKKAVQT-MLCAKVEKDQRSNYYDTILYGVAPPPEFRNRFKTNE--RYGLDYESDQYTELVNLLAD 85 (312)
T ss_dssp SSBCEEEEC-----CHHHHHH-HHHSCCCGGGTTSCEECSSSCEECCGGGGGGBCBTT--BCCBCTTSHHHHHHHHHHHH
T ss_pred CCceEEEEc-----chHHHHH-HHhhhcccccccCccceeEeecCCChHHHhhccCCC--ccccCccHHHHHHHHHHHHH
Confidence 334555553 3444444 44455554545566664 1 1111246888888 999875 678999999999
Q ss_pred HHHHHHHH
Q 034072 84 AVKLTVKI 91 (104)
Q Consensus 84 ~l~~~~~~ 91 (104)
+|+ .+.+
T Consensus 86 ~LN-~~k~ 92 (312)
T 2gu0_A 86 TLN-MVSM 92 (312)
T ss_dssp HHH-HHTC
T ss_pred Hhc-ceec
Confidence 998 4454
No 223
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=24.47 E-value=92 Score=18.46 Aligned_cols=73 Identities=10% Similarity=0.023 Sum_probs=39.7
Q ss_pred CceeeEeccCCCCCHHHHHHHHhhcCceecc--CCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 12 NHLVLVNLKNKGIDGSRVEKVLEAVHIAANK--NTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 12 ~Hlvlvdl~~~gi~g~~a~~~Le~~gI~vnk--n~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
-+++++|+.-.+.+|.+..+.+.+....-+. -.+-..........++.|....-.+-+.. .++.+.|.+++..
T Consensus 48 ~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~~---~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 48 PDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVKP---PVLIAQLHALLAR 122 (133)
T ss_dssp CSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCCH---HHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCCH---HHHHHHHHHHHhh
Confidence 4689999876778999999888875321000 00001111111345667766555555554 4456666666654
No 224
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=24.46 E-value=77 Score=23.01 Aligned_cols=44 Identities=14% Similarity=0.207 Sum_probs=34.4
Q ss_pred CHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHH
Q 034072 25 DGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAV 85 (104)
Q Consensus 25 ~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l 85 (104)
.+.++.+.|+++|+.+.....|+.. . ++.+++++.+.+||.+.|
T Consensus 223 ~~~~~~~~L~~~g~~~~~~~y~g~g-----H------------~i~~~~l~~~~~fL~~~L 266 (285)
T 4fhz_A 223 DMSLAGEALAEAGFTTYGHVMKGTG-----H------------GIAPDGLSVALAFLKERL 266 (285)
T ss_dssp HHHHHHHHHHHTTCCEEEEEETTCC-----S------------SCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCC-----C------------CCCHHHHHHHHHHHHHHC
Confidence 5778889999999988877677652 2 246789999999998766
No 225
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=24.34 E-value=1.2e+02 Score=23.90 Aligned_cols=50 Identities=18% Similarity=0.085 Sum_probs=35.8
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
.+++.+.|-+.|+.+..+. | ..+-|||- |++| ++++|+.+.-+.+.++|+
T Consensus 404 ~~~v~~~~~~~Gvl~~~~g-~------~~~~irl~-PpL~---it~~~id~~l~~l~~al~ 453 (456)
T 4atq_A 404 TKAVAAACLKEGVIILTCG-T------YGNVIRLL-PPLV---ISDELLIDGLEVLAAAIK 453 (456)
T ss_dssp HHHHHHHHHHTTEECEEEC-T------TSCEEEEC-CCTT---CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEecC-C------CCCEEEEE-CCCC---CCHHHHHHHHHHHHHHHH
Confidence 3456677778899887541 1 12348987 6665 578999999999988886
No 226
>2xzm_M RPS18E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_M
Probab=24.34 E-value=1.1e+02 Score=21.21 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=32.5
Q ss_pred CCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHH
Q 034072 22 KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 22 ~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~ 83 (104)
+||.-..|..+|+++||.-++ |+| -++++|...|.++|.+
T Consensus 36 ~GIG~~~A~~I~~~~gid~~~---------------r~~-------~Lt~~ei~~l~~~i~~ 75 (155)
T 2xzm_M 36 RGIGRRFAYIICKVLKIDPNA---------------RAG-------LLTEDQCNKITDLIAD 75 (155)
T ss_dssp TTCCHHHHHHHHHHTTCCSSS---------------CSS-------CSCHHHHHHHHHHHHS
T ss_pred cccCHHHHHHHHHHcCCCccc---------------ccc-------cCCHHHHHHHHHHHhC
Confidence 789999999999999987663 333 3778999999888865
No 227
>1pu1_A Hypothetical protein MTH677; structural genomics, alpha and beta protein (A+B), unknown function; NMR {Methanothermobacterthermautotrophicus} SCOP: d.266.1.1
Probab=23.41 E-value=62 Score=21.00 Aligned_cols=24 Identities=17% Similarity=0.409 Sum_probs=20.4
Q ss_pred HhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 64 LTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 64 ~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
|+-|-++++|..+|+++.++++..
T Consensus 4 ~~L~kLSe~eL~eIse~~~~~i~~ 27 (94)
T 1pu1_A 4 MSLRKLTEGDLDEISSFLHNTISD 27 (94)
T ss_dssp CCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCccccCHHHHHHHHHHHHHHHHH
Confidence 556788999999999999998753
No 228
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=23.27 E-value=43 Score=23.47 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=23.9
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCce
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIA 39 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~ 39 (104)
|+.+ +.|+|.|- ....+-.-.++.+.|+++|+.
T Consensus 216 g~~~-~~gSDaH~----~~~~~~~~~~a~~~l~~~g~~ 248 (267)
T 2yxo_A 216 GIGL-VLGSDAHR----PEEVGFAFPEVQALLAGLGFR 248 (267)
T ss_dssp TCCE-EEECCBSS----GGGTTTTHHHHHHHHHHHTCC
T ss_pred CCCE-EEecCCCC----HHHHHhhHHHHHHHHHHcCCC
Confidence 4455 67899994 344555678888999998875
No 229
>1a56_A C-551, ferricytochrome C-552; hemoprotein, prokaryotic electron transport; HET: HEC; NMR {Nitrosomonas europaea} SCOP: a.3.1.1 PDB: 1a8c_A*
Probab=23.11 E-value=52 Score=18.69 Aligned_cols=16 Identities=13% Similarity=0.135 Sum_probs=14.1
Q ss_pred CCCHHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFDA 83 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~~ 83 (104)
.++++|+..|+++|..
T Consensus 64 ~Ls~~ei~~l~~yl~~ 79 (81)
T 1a56_A 64 NVSDADAKALADWILT 79 (81)
T ss_dssp SSSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 5899999999999864
No 230
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=23.00 E-value=76 Score=25.24 Aligned_cols=63 Identities=17% Similarity=0.143 Sum_probs=40.2
Q ss_pred HHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhH----hhcCCCHHHHH-HHHHHHHHHHHHHHHHhhhc
Q 034072 27 SRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPAL----TSRGFVEEDFA-KVAYFFDAAVKLTVKIKSET 95 (104)
Q Consensus 27 ~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~----T~RG~~e~dm~-~Ia~~i~~~l~~~~~~~~~~ 95 (104)
.+|.+.|++.||.+-...+- +..|+.+...++ ++..+++++.. ++.++|.+++....+..++.
T Consensus 328 ~ea~~il~~~GI~~~Pd~~a------NaGGV~vS~~E~~qN~~~~~w~~e~V~~~l~~~m~~~~~~v~~~A~~~ 395 (421)
T 2yfq_A 328 PEGDKVLTERGINLTPDILT------NSGGVLVSYYEWVQNQYGYYWTEAEVEEKQEADMMKAIKGVFAVADEY 395 (421)
T ss_dssp HHHHHHHHHHTCEEECHHHH------TTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEChHHH------hCCCeEEEEEEEEecCccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888999999886532111 134666665555 67788888754 56666666666666555555
No 231
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=22.86 E-value=1.6e+02 Score=22.03 Aligned_cols=45 Identities=9% Similarity=0.058 Sum_probs=32.4
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKL 87 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~ 87 (104)
..+..+.|.+.||.+. |+. .+|+. -..+++|++++.+.|.+++..
T Consensus 390 ~~~l~~~l~~~Gv~v~----~~~-------~~~l~------~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 390 IAAMRMALILEGVDIG----GRG-------SVFLS------AQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp HHHHHHHHHHTTEECB----TTT-------EEECC------TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEe----CCC-------CEEee------ccCCHHHHHHHHHHHHHHHHH
Confidence 4566777778899983 331 26652 357899999999999888764
No 232
>2zxy_A Cytochrome C552, cytochrome C555; heme protein, oxygen binding, transport protein; HET: HEC; 1.15A {Aquifex aeolicus}
Probab=22.85 E-value=64 Score=18.14 Aligned_cols=16 Identities=19% Similarity=0.466 Sum_probs=14.0
Q ss_pred cCCCHHHHHHHHHHHH
Q 034072 67 RGFVEEDFAKVAYFFD 82 (104)
Q Consensus 67 RG~~e~dm~~Ia~~i~ 82 (104)
..++++|+..|+.+|.
T Consensus 69 ~~ls~~ei~~l~~yl~ 84 (87)
T 2zxy_A 69 KGLSDAELKALADFIL 84 (87)
T ss_dssp GGCCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHH
Confidence 3799999999999985
No 233
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=22.84 E-value=47 Score=19.08 Aligned_cols=20 Identities=10% Similarity=0.039 Sum_probs=17.7
Q ss_pred CCCHHHHHHHHhhcCceecc
Q 034072 23 GIDGSRVEKVLEAVHIAANK 42 (104)
Q Consensus 23 gi~g~~a~~~Le~~gI~vnk 42 (104)
|.+-.+|++.|+++|+.+..
T Consensus 15 G~~~~~A~~~L~~~Gl~~~~ 34 (71)
T 3ouv_A 15 GQTVDVAQKNMNVYGFTKFS 34 (71)
T ss_dssp TCBHHHHHHHHHHTTCCCEE
T ss_pred CCCHHHHHHHHHHCCCeEEE
Confidence 78899999999999998754
No 234
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=22.73 E-value=2.1e+02 Score=21.76 Aligned_cols=48 Identities=25% Similarity=0.290 Sum_probs=32.3
Q ss_pred HHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 28 RVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 28 ~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..-+.|++.||.+- ++... .+++|+|... -.+++|++.+.+.|.++++
T Consensus 326 ~~l~~l~~~Gi~~~----~g~~~---~g~iRiS~~~----~~t~edId~l~~al~~~~~ 373 (377)
T 3e77_A 326 RFLDKALELNMLSL----KGHRS---VGGIRASLYN----AVTIEDVQKLAAFMKKFLE 373 (377)
T ss_dssp HHHHHHHHTTEESC----BCCTT---TCSEEEECCT----TSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEe----CCCCc---CCEEEEECCC----CCCHHHHHHHHHHHHHHHH
Confidence 34455667899763 23321 3579999643 3467999999988887664
No 235
>1gdv_A Cytochrome C6; RED ALGA, electron transport; HET: HEM; 1.57A {Porphyra yezoensis} SCOP: a.3.1.1 PDB: 2zbo_A*
Probab=22.68 E-value=67 Score=18.03 Aligned_cols=16 Identities=25% Similarity=0.424 Sum_probs=14.2
Q ss_pred CCCHHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFDA 83 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~~ 83 (104)
.++++|+..|+.+|..
T Consensus 64 ~ls~~ei~~l~~yl~~ 79 (85)
T 1gdv_A 64 RLVDEDIEDAANYVLS 79 (85)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 5899999999999965
No 236
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=22.67 E-value=2.3e+02 Score=20.80 Aligned_cols=46 Identities=13% Similarity=-0.029 Sum_probs=31.2
Q ss_pred HHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 26 GSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 26 g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
..+..+.|.+.||.+..... ..+|+. ...+++|+++..+.|.+++.
T Consensus 380 ~~~l~~~l~~~Gi~v~~~~~---------~r~~~~------~~~t~e~i~~~l~~l~~~l~ 425 (427)
T 3fq8_A 380 FSRFHRGMLEQGIYLAPSQF---------EAGFTS------LAHTEEDIDATLAAARTVMS 425 (427)
T ss_dssp HHHHHHHHHHTTEECCSSTT---------SCEECC------TTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcEEecCCC---------CCEEee------CcCCHHHHHHHHHHHHHHHH
Confidence 45667777788998874321 124443 34678999999988888765
No 237
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=22.66 E-value=30 Score=21.33 Aligned_cols=22 Identities=27% Similarity=0.472 Sum_probs=18.3
Q ss_pred ccCCCCCHHHHHHHHhhcCcee
Q 034072 19 LKNKGIDGSRVEKVLEAVHIAA 40 (104)
Q Consensus 19 l~~~gi~g~~a~~~Le~~gI~v 40 (104)
|.++|++..+++..|.++|...
T Consensus 42 L~sKGLt~eEI~~Al~ra~~~~ 63 (70)
T 2w84_A 42 LKKKGLTDEEIDMAFQQSGTAA 63 (70)
T ss_dssp HHHTTCCHHHHHHHHHHHTCCC
T ss_pred HHHcCCCHHHHHHHHHHccCCC
Confidence 3578999999999999987544
No 238
>3dp5_A OMCF, cytochrome C family protein; C-type cytochrome, Fe SAD phasing, dissimilatory metal reduction, electron transport; HET: HEM; 1.86A {Geobacter sulfurreducens} SCOP: a.3.1.0
Probab=22.40 E-value=38 Score=20.60 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=17.0
Q ss_pred cchhHhhcC---CCHHHHHHHHHHHHH
Q 034072 60 GTPALTSRG---FVEEDFAKVAYFFDA 83 (104)
Q Consensus 60 GT~a~T~RG---~~e~dm~~Ia~~i~~ 83 (104)
|-..|-..+ ++++|+..|+.+|..
T Consensus 70 G~~~MP~~~~~~Lsd~ei~~l~~Yi~~ 96 (99)
T 3dp5_A 70 PGPGMPAFGEAMIPPADALKIGEYVVA 96 (99)
T ss_dssp CCTTSCCCCTTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 333444443 899999999999854
No 239
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=22.29 E-value=74 Score=25.30 Aligned_cols=68 Identities=13% Similarity=0.164 Sum_probs=41.5
Q ss_pred CCCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhH----hhcCCCHHHHH-HHHHHHHHHHHHHHHHhhhc
Q 034072 21 NKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPAL----TSRGFVEEDFA-KVAYFFDAAVKLTVKIKSET 95 (104)
Q Consensus 21 ~~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~----T~RG~~e~dm~-~Ia~~i~~~l~~~~~~~~~~ 95 (104)
+..++ .+|.+.|++.||.+.+..+-+ ..|+-....++ ++..+++++.. ++.++|.+++....+..++.
T Consensus 316 N~p~t-~~a~~~l~~~Gi~~~PD~~aN------aGGV~~s~~E~vqN~~~~~w~~e~v~~~l~~~m~~~~~~v~~~A~~~ 388 (415)
T 2tmg_A 316 NGPTT-PEADEILSRRGILVVPDILAN------AGGVTVSYFEWVQDLQSFFWDLDQVRNALEKMMKGAFNDVMKVKEKY 388 (415)
T ss_dssp SSCBC-HHHHHHHHHTTCEEECHHHHT------CHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccC-HHHHHHHHHCCCEEEChHHHh------CCCceEEEEEEEecCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445 778899999999987543322 24666665555 66778877643 34455555555555554444
No 240
>1c53_A Cytochrome C553; electron transport; HET: HEM; 1.80A {Desulfovibrio vulgaris str} SCOP: a.3.1.1 PDB: 1dvh_A* 1dwl_B* 1e08_E* 2dvh_A*
Probab=22.08 E-value=59 Score=18.46 Aligned_cols=17 Identities=12% Similarity=0.464 Sum_probs=14.4
Q ss_pred cCCCHHHHHHHHHHHHH
Q 034072 67 RGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 67 RG~~e~dm~~Ia~~i~~ 83 (104)
..++++|+..|+.+|..
T Consensus 62 ~~Ls~~ei~~l~~Yl~s 78 (79)
T 1c53_A 62 KRYSDEEMKAMADYMSK 78 (79)
T ss_pred hhCCHHHHHHHHHHHHh
Confidence 35999999999999853
No 241
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=21.52 E-value=83 Score=20.73 Aligned_cols=24 Identities=21% Similarity=0.224 Sum_probs=19.9
Q ss_pred cchhHhhcCCCHHHHHHHHHHHHH
Q 034072 60 GTPALTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 60 GT~a~T~RG~~e~dm~~Ia~~i~~ 83 (104)
=..++-+|-++++|+.+||..+.+
T Consensus 35 PLlALL~R~Ltddev~~Va~~L~~ 58 (107)
T 3ol3_A 35 ALLALLKRSLTEDEVVRAAQAILR 58 (107)
T ss_dssp HHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhcccCCHHHHHHHHHHHHh
Confidence 346888899999999999987755
No 242
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=21.43 E-value=99 Score=22.76 Aligned_cols=28 Identities=11% Similarity=0.146 Sum_probs=22.0
Q ss_pred CeeeEcchhHhhcCCCHHHHHHHHHHHHHHHH
Q 034072 55 GGIRMGTPALTSRGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 55 sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~ 86 (104)
+.|||+.... .+++|++++.+.|.+++.
T Consensus 399 ~~iRis~~~~----~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 399 NAVRLSVGRS----TTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp TEEEEECCTT----CCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCC----CCHHHHHHHHHHHHHHHH
Confidence 5799996543 368999999999888775
No 243
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=21.35 E-value=1.1e+02 Score=23.21 Aligned_cols=76 Identities=9% Similarity=-0.034 Sum_probs=43.1
Q ss_pred CCeeeeCCCCCceeeEeccCCCCCHHHHHHHHhhcCcee-ccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHH
Q 034072 2 GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAA-NKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYF 80 (104)
Q Consensus 2 G~~vv~ggTd~Hlvlvdl~~~gi~g~~a~~~Le~~gI~v-nkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~ 80 (104)
|++++.. .+.+++.+.+.+..-...+..+.|.+.|+.+ ....+. ....+|+.... .-.+++|++++.+.
T Consensus 397 ~~~~~~~-~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~------~~~~lRi~~~~---~~~t~~di~~~~~~ 466 (486)
T 1js3_A 397 RFEVCAE-VTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLR------GQFVLRFAICS---RKVESGHVRLAWEH 466 (486)
T ss_dssp TEEECSC-CCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEET------TEEEEEEECCC---TTCCHHHHHHHHHH
T ss_pred CeEEeCC-CceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEEC------CEEEEEEEeCC---CCCCHHHHHHHHHH
Confidence 5566542 3456666665421101366677777777653 221111 13469998522 22357899999888
Q ss_pred HHHHHHH
Q 034072 81 FDAAVKL 87 (104)
Q Consensus 81 i~~~l~~ 87 (104)
|.+++..
T Consensus 467 l~~~~~~ 473 (486)
T 1js3_A 467 IRGLAAE 473 (486)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877653
No 244
>3j20_O 30S ribosomal protein S13P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=21.35 E-value=1.1e+02 Score=21.18 Aligned_cols=40 Identities=18% Similarity=0.207 Sum_probs=32.4
Q ss_pred CCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHHH
Q 034072 22 KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 22 ~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~ 83 (104)
+||.-..|..+|+++||..|+ |+| -++++|.+.|-++|.+
T Consensus 29 ~GIG~~~A~~I~~~~gid~~~---------------r~g-------~Lt~~ei~~i~~~i~~ 68 (148)
T 3j20_O 29 KGIGINFATMVCRVAGLDPFM---------------KAG-------YLTDEQVKKIEEILAD 68 (148)
T ss_dssp TTCCHHHHHHHHHHHTCCSSS---------------CTT-------BCCHHHHHHHHHHHHC
T ss_pred cCcCHHHHHHHHHHhCCCCCc---------------eec-------cCCHHHHHHHHHHHhc
Confidence 689999999999999997763 333 3788999998888854
No 245
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=21.26 E-value=63 Score=23.17 Aligned_cols=31 Identities=16% Similarity=0.145 Sum_probs=25.5
Q ss_pred eeeEcchhHhh---cCCCHHHHHHHHHHHHHHHH
Q 034072 56 GIRMGTPALTS---RGFVEEDFAKVAYFFDAAVK 86 (104)
Q Consensus 56 glRlGT~a~T~---RG~~e~dm~~Ia~~i~~~l~ 86 (104)
=|.+|..++|- .+++++-++.+|+.|++...
T Consensus 11 ViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l~~ 44 (240)
T 4a7w_A 11 LVKFSGEALAGDNQFGIDIHVLDHIAKEIKSLVE 44 (240)
T ss_dssp EEEECGGGGGTTSSSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEECHHHcCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 38999999994 56889999999998877654
No 246
>1c75_A Cytochrome C-553; heme, bacillus pasteurii, AB initio, ATOM resolution, electron transport; HET: HEM; 0.97A {Sporosarcina pasteurii} SCOP: a.3.1.1 PDB: 1b7v_A* 1k3g_A* 1k3h_A* 1n9c_A*
Probab=21.05 E-value=65 Score=17.86 Aligned_cols=16 Identities=13% Similarity=-0.027 Sum_probs=14.0
Q ss_pred cCCCHHHHHHHHHHHH
Q 034072 67 RGFVEEDFAKVAYFFD 82 (104)
Q Consensus 67 RG~~e~dm~~Ia~~i~ 82 (104)
..++++|+..|+++|.
T Consensus 53 ~~ls~~ei~~l~~yl~ 68 (71)
T 1c75_A 53 GIAKGAEAEAVAAWLA 68 (71)
T ss_dssp CSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4689999999999985
No 247
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=20.87 E-value=66 Score=24.03 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=27.0
Q ss_pred eeeEcchhHhhc--CCCHHHHHHHHHHHHHHHHHH
Q 034072 56 GIRMGTPALTSR--GFVEEDFAKVAYFFDAAVKLT 88 (104)
Q Consensus 56 glRlGT~a~T~R--G~~e~dm~~Ia~~i~~~l~~~ 88 (104)
=|.||...+|.. |++++-++.+|+.|+++.+..
T Consensus 54 ViKlGGs~L~~~~~~ld~~~i~~la~~I~~l~~~G 88 (281)
T 3nwy_A 54 LLKLGGEMFGGGQVGLDPDVVAQVARQIADVVRGG 88 (281)
T ss_dssp EEEECGGGGGTTSSSCCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEchhhccCCCCCCCHHHHHHHHHHHHHHHHCC
Confidence 389999999964 688899999999998776543
No 248
>3ph2_B Cytochrome C6; photosynthesis, cytochrome F, photosys thylakoid; HET: HEM; 1.40A {Phormidium laminosum} SCOP: a.3.1.1 PDB: 2v08_A* 1c6s_A*
Probab=20.81 E-value=70 Score=17.97 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=14.0
Q ss_pred CCCHHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFDA 83 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~~ 83 (104)
.++++|+..|+.+|..
T Consensus 65 ~ls~~ei~~l~~yl~~ 80 (86)
T 3ph2_B 65 RLTDDQIAAVAAYVLD 80 (86)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4899999999999965
No 249
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=20.67 E-value=64 Score=18.18 Aligned_cols=15 Identities=20% Similarity=0.286 Sum_probs=13.4
Q ss_pred CCCHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFD 82 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~ 82 (104)
.++++|+..|+++|.
T Consensus 62 ~Ls~~ei~~l~~yl~ 76 (79)
T 2d0s_A 62 QVAEADIEKIVRWVL 76 (79)
T ss_dssp TSCHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHH
Confidence 689999999999984
No 250
>3iz6_M 40S ribosomal protein S18 (S13P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=20.57 E-value=1.3e+02 Score=20.87 Aligned_cols=39 Identities=23% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHH
Q 034072 22 KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 82 (104)
Q Consensus 22 ~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~ 82 (104)
+||.-..|...|+++||..++ |+| -++++|.+.|-++|.
T Consensus 34 ~GIG~~~A~~I~~~~gid~~~---------------r~g-------~Lt~~ei~~l~~~i~ 72 (152)
T 3iz6_M 34 KGVGRRFSNIVCKKADIDMNK---------------RAG-------ELSAEEMDRLMAVVH 72 (152)
T ss_dssp TTCCHHHHHHHHHHHTCCSSS---------------BTT-------TSCHHHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHcCCCCCc---------------EeC-------cCCHHHHHHHHHHHH
Confidence 689999999999999997763 333 377888888888875
No 251
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Probab=20.56 E-value=33 Score=21.82 Aligned_cols=27 Identities=11% Similarity=-0.141 Sum_probs=19.6
Q ss_pred eEcchhHhhcCCCHHHHHHHHHHHHHH
Q 034072 58 RMGTPALTSRGFVEEDFAKVAYFFDAA 84 (104)
Q Consensus 58 RlGT~a~T~RG~~e~dm~~Ia~~i~~~ 84 (104)
-.-++.+|.|-+.++|+..|.+++.++
T Consensus 13 ~~~~~~~~iR~~~~~D~~~i~~l~~~~ 39 (188)
T 3h4q_A 13 ENLYFQGMIRLGKMSDLDQILNLVEEA 39 (188)
T ss_dssp ------CCEEECCGGGHHHHHHHHHHH
T ss_pred cCcceeEEEEecCHhhHHHHHHHHHHH
Confidence 344677899999999999999999886
No 252
>1cch_A Cytochrome C551; electron transport; HET: HEM; NMR {Pseudomonas stutzeri} SCOP: a.3.1.1 PDB: 1fi3_A* 2i8f_A* 1cor_A*
Probab=20.39 E-value=75 Score=17.78 Aligned_cols=16 Identities=19% Similarity=0.125 Sum_probs=14.0
Q ss_pred CCCHHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFDA 83 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~~ 83 (104)
.++++|+..|+.+|..
T Consensus 65 ~ls~~ei~~l~~yl~~ 80 (82)
T 1cch_A 65 PVTEEEAKILAEWVLS 80 (82)
T ss_dssp SCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh
Confidence 6899999999999854
No 253
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=20.26 E-value=1e+02 Score=23.51 Aligned_cols=10 Identities=20% Similarity=0.268 Sum_probs=7.5
Q ss_pred CCeeeeCCCC
Q 034072 2 GYELVSGGTE 11 (104)
Q Consensus 2 G~~vv~ggTd 11 (104)
+.+++.||||
T Consensus 26 ~a~~lAGGT~ 35 (324)
T 1rm6_B 26 ATLPLGAGTD 35 (324)
T ss_dssp TEEEESSCTT
T ss_pred CCEEEECchh
Confidence 4567888887
No 254
>2l4d_A SCO1/SENC family protein/cytochrome C; electron transfer, electron transport; HET: HEC; NMR {Pseudomonas putida}
Probab=20.23 E-value=65 Score=19.14 Aligned_cols=20 Identities=0% Similarity=0.250 Sum_probs=16.1
Q ss_pred HhhcCCCHHHHHHHHHHHHH
Q 034072 64 LTSRGFVEEDFAKVAYFFDA 83 (104)
Q Consensus 64 ~T~RG~~e~dm~~Ia~~i~~ 83 (104)
|...+++++|+..|+.+|..
T Consensus 76 Mp~~~Ls~~ei~~l~~yl~~ 95 (110)
T 2l4d_A 76 MPNMRLGDAEVSALISYLEE 95 (110)
T ss_dssp CCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 33446999999999999965
No 255
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=20.23 E-value=56 Score=24.77 Aligned_cols=40 Identities=10% Similarity=0.144 Sum_probs=28.6
Q ss_pred CCCCeeeEcchhHhhcCCCHHHHHHHHHHHHHHHHHHHHH
Q 034072 52 MVPGGIRMGTPALTSRGFVEEDFAKVAYFFDAAVKLTVKI 91 (104)
Q Consensus 52 ~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~~~l~~~~~~ 91 (104)
..||.+.......+-|-|+++|+++|-+-+.++...+++.
T Consensus 125 ~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~a 164 (349)
T 3hgj_A 125 VGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRA 164 (349)
T ss_dssp EESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 3456665532223568899999999999888888877664
No 256
>1gks_A Cytochrome C551; halophilic purple phototrophic bacterium, electron transport; HET: HEM; NMR {Halorhodospira halophila} SCOP: a.3.1.1
Probab=20.20 E-value=61 Score=18.51 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=13.8
Q ss_pred CCCHHHHHHHHHHHHH
Q 034072 68 GFVEEDFAKVAYFFDA 83 (104)
Q Consensus 68 G~~e~dm~~Ia~~i~~ 83 (104)
.++++|+..|+.+|..
T Consensus 61 ~Lsd~ei~~l~~yi~~ 76 (78)
T 1gks_A 61 RADREDLVKAIEYMLS 76 (78)
T ss_dssp TBCHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh
Confidence 4899999999999864
No 257
>3u5c_S 40S ribosomal protein S18-A, 40S ribosomal protein S17-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_M 3o30_L 3o2z_L 3u5g_S 1s1h_M 3jyv_M* 2zkq_m
Probab=20.08 E-value=1.2e+02 Score=20.81 Aligned_cols=39 Identities=18% Similarity=0.399 Sum_probs=30.6
Q ss_pred CCCCHHHHHHHHhhcCceeccCCCCCCCCCCCCCeeeEcchhHhhcCCCHHHHHHHHHHHH
Q 034072 22 KGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAYFFD 82 (104)
Q Consensus 22 ~gi~g~~a~~~Le~~gI~vnkn~lP~d~~~~~~sglRlGT~a~T~RG~~e~dm~~Ia~~i~ 82 (104)
+||.-..|...|+++||..|+ |+| -++++|.+.|-++|.
T Consensus 36 ~GIG~~~A~~I~~~~gid~~~---------------r~g-------~Lt~~ei~~l~~~i~ 74 (146)
T 3u5c_S 36 KGVGRRYSNLVCKKADVDLHK---------------RAG-------ELTQEELERIVQIMQ 74 (146)
T ss_dssp TTCCHHHHHHHHHHHTCCTTS---------------CSS-------SCCHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHcCCCCCc---------------eec-------cCCHHHHHHHHHHHH
Confidence 689999999999999997663 333 377888888887774
Done!