BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034078
(104 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93X17|SNAK2_SOLTU Snakin-2 OS=Solanum tuberosum GN=SN2 PE=1 SV=1
Length = 104
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 71/104 (68%)
Query: 1 MAISSSKAFIASVLLSLILVLHLVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRP 60
MAIS + + L L+ + + DQ+ + ++Y IDCG AC ARC+LSSRP
Sbjct: 1 MAISKALFASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRP 60
Query: 61 NLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
LC+RACGTCCARC CVPPGTSG+ E CPCYA++TTH +RKCP
Sbjct: 61 RLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104
>sp|F4IQJ4|GASAB_ARATH Gibberellin-regulated protein 11 OS=Arabidopsis thaliana GN=GASA11
PE=3 SV=1
Length = 94
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 60/82 (73%), Gaps = 7/82 (8%)
Query: 23 LVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTS 82
V AD MV +N+ P IDC + C+ RC LSSRPNLCHRACGTCCARC CV PGTS
Sbjct: 20 FVHAD-MVTSNDA------PKIDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTS 72
Query: 83 GHLEVCPCYATMTTHHGRRKCP 104
G+ + CPCY ++TTH GRRKCP
Sbjct: 73 GNYDKCPCYGSLTTHGGRRKCP 94
>sp|P46689|GASA1_ARATH Gibberellin-regulated protein 1 OS=Arabidopsis thaliana GN=GASA1
PE=2 SV=2
Length = 98
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 30 VNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCP 89
V ++ + Y IDCG+AC ARC+LS RP LCHRACGTCC RC CVPPGT G+ + C
Sbjct: 25 VENSQKKNGY-AKKIDCGSACVARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKCQ 83
Query: 90 CYATMTTHHGRRKCP 104
CYA++TTH GRRKCP
Sbjct: 84 CYASLTTHGGRRKCP 98
>sp|P46687|GASA3_ARATH Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3
PE=2 SV=1
Length = 99
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 55/86 (63%), Gaps = 6/86 (6%)
Query: 19 LVLHLVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARCKCVP 78
LH+ AA+ EG IDCG CK RC SSRPNLC RAC +CC RC CVP
Sbjct: 20 FELHVHAAEDS-QVGEGVVK-----IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVP 73
Query: 79 PGTSGHLEVCPCYATMTTHHGRRKCP 104
PGT+G+ +CPCYA++TT GR KCP
Sbjct: 74 PGTAGNHHLCPCYASITTRGGRLKCP 99
>sp|Q8GWK5|GASA9_ARATH Gibberellin-regulated protein 9 OS=Arabidopsis thaliana GN=GASA9
PE=2 SV=1
Length = 119
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 17/113 (15%)
Query: 8 AFIASVLLSLILVLHLVAA------------DQMVNTNEGASSYPT----PTIDCGAACK 51
AF+ ++++S +L+ ++A Q + N+ A+ T P I+CG AC
Sbjct: 8 AFV-TLIISFLLLSQVLAELSSSSNNETSSVSQTNDENQTAAFKRTYHHRPRINCGHACA 66
Query: 52 ARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
RC +SR +CHRACG+CCA+C+CVPPGTSG+ CPCYA++ TH + KCP
Sbjct: 67 RRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKCP 119
>sp|P46688|GASA2_ARATH Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2
PE=2 SV=1
Length = 99
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 55/84 (65%), Gaps = 6/84 (7%)
Query: 21 LHLVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPG 80
LH+ AAD EG IDCG CK RC SSR LC RAC +CC+RC CVPPG
Sbjct: 22 LHVHAADG-AKVGEGVVK-----IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPG 75
Query: 81 TSGHLEVCPCYATMTTHHGRRKCP 104
TSG+ +CPCYA++TTH GR KCP
Sbjct: 76 TSGNTHLCPCYASITTHGGRLKCP 99
>sp|Q9LFR3|GASAE_ARATH Gibberellin-regulated protein 14 OS=Arabidopsis thaliana GN=GASA14
PE=1 SV=1
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 44 IDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVC-PCYATMTTHHGRRK 102
IDC C RC SR N+C RAC TCC RCKCVPPGT G+ E C CYA M T G+ K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273
Query: 103 CP 104
CP
Sbjct: 274 CP 275
>sp|Q6NMQ7|GASA6_ARATH Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6
PE=3 SV=1
Length = 101
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 9 FIASVLLSLILVLH--LVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRA 66
I S LL IL L + + E + CG C RC + C
Sbjct: 4 LITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCMFF 63
Query: 67 CGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
C CCA+C CVPPGT G+ +VCPCY T G KCP
Sbjct: 64 CQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101
>sp|O80641|GASA8_ARATH Gibberellin-regulated protein 8 OS=Arabidopsis thaliana
GN=At2g39540 PE=2 SV=1
Length = 87
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 15 LSLILVLHLVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARC 74
+ L++V + + + ++ SS + CG C RC + + C + C CC +C
Sbjct: 1 MKLVVVQFFIISLLLTSSFSVLSSADS---SCGGKCNVRCSKAGQHEECLKYCNICCQKC 57
Query: 75 KCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
CVP GT GH + CPCY M G KCP
Sbjct: 58 NCVPSGTFGHKDECPCYRDMKNSKGGSKCP 87
>sp|P47926|RSI1_SOLLC Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1
Length = 96
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 8 AFIASVLLSLILVLHLVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRAC 67
+ AS LL + + L L+ +V EG + PT DC C RC +S C C
Sbjct: 5 GYNASFLLLISMFLILLTFSNVV---EGYNKL-RPT-DCKPRCTYRCSATSHKKPCMFFC 59
Query: 68 GTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
CCA C CVP G G+ + CPCY T G+ KCP
Sbjct: 60 QKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
>sp|P46690|GASA4_ARATH Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4
PE=1 SV=2
Length = 106
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 6 SKAFIASVLLSLILVLHL---VAADQMVNTNEGASSYPTPTI---DCGAACKARCQLSSR 59
+K++ A LL+LI++ L V A N Y ++ C + C RC+ +
Sbjct: 2 AKSYGAIFLLTLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQY 61
Query: 60 PNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
C C CC +C CVPPG G+ +VC CY T G KCP
Sbjct: 62 HKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
>sp|Q948Z4|SNAK1_SOLTU Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1
Length = 88
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 29 MVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVC 88
++ T SS+ C + CK RC + + C + CG CC CKCVP GT G+ C
Sbjct: 19 LIQTTMAGSSF------CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHEC 72
Query: 89 PCYATMTTHHGRRKCP 104
PCY G+ KCP
Sbjct: 73 PCYRDKKNSKGKSKCP 88
>sp|Q8LFM2|GASAA_ARATH Gibberellin-regulated protein 10 OS=Arabidopsis thaliana GN=GASA10
PE=2 SV=1
Length = 89
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 18 ILVLHLVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRPNLCHRACGTCCARCK-C 76
+L++ L+ + + SS CG C RC + R + C + C CC +C C
Sbjct: 8 VLIISLLITSSLFILSTADSS------PCGGKCNVRCSKAGRQDRCLKYCNICCEKCNYC 61
Query: 77 VPPGTSGHLEVCPCYATMTTHHGRRKCP 104
VP GT G+ + CPCY M G KCP
Sbjct: 62 VPSGTYGNKDECPCYRDMKNSKGTSKCP 89
>sp|P27057|GAST1_SOLLC Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1
Length = 112
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 31/60 (51%)
Query: 45 DCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
DC C RC +S C C CCA+C CVP GT G+ + CPCY T G KCP
Sbjct: 53 DCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
>sp|O82328|GASA7_ARATH Gibberellin-regulated protein 7 OS=Arabidopsis thaliana GN=GASA7
PE=3 SV=1
Length = 108
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 46 CGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
CG C+ RC+ + + C + CG CC C+CVP GT G+ C CY + G KCP
Sbjct: 50 CGQKCEGRCKEAGMKDRCLKYCGICCKDCQCVPSGTYGNKHECACYRDKLSSKGTPKCP 108
>sp|P86888|PMLN_PRUPE Peamaclein OS=Prunus persica PE=1 SV=1
Length = 63
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 46 CGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
C + C RC + C + CG CC +C CVP GT G+ + CPCY + G KCP
Sbjct: 5 CDSKCGVRCSKAGYQERCLKYCGICCEKCHCVPSGTYGNKDECPCYRDLKNSKGNPKCP 63
>sp|A8MR46|GASAD_ARATH Gibberellin-regulated protein 13 OS=Arabidopsis thaliana GN=GASA13
PE=3 SV=1
Length = 103
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 1 MAISSSKAFIASVLLSLILVLHLVAADQMVNTNEGASSYPTPTIDCGAACKARCQLSSRP 60
MA S + V+L L+L H+ + E S+ P P ++CG C RC +
Sbjct: 1 MATKLSIIVFSIVVLHLLLSAHMHFLINVCAECETKSAIP-PLLECGPRCGDRCSNTQYK 59
Query: 61 NLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
C C CC +C CVPPGT G+ +VCPCY T G KCP
Sbjct: 60 KPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103
>sp|Q6GKX7|GASAC_ARATH Gibberellin-regulated protein 12 OS=Arabidopsis thaliana GN=GASA12
PE=3 SV=1
Length = 106
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 14 LLSLILVLHLVAADQMVNTNEGASSYPTPTI------------DCGAACKARCQLSSRPN 61
L+ + ++ L+ A Q N +E S P I +C AC+ RC +S
Sbjct: 4 LIVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRK 63
Query: 62 LCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
C C CC +C CVP GT GH E CPCY TT G KCP
Sbjct: 64 PCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106
>sp|Q84J95|GASA5_ARATH Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5
PE=2 SV=1
Length = 97
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 32/60 (53%)
Query: 45 DCGAACKARCQLSSRPNLCHRACGTCCARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
C + C RC +S C C CC +C CVPPGT G+ + CPCY T GR KCP
Sbjct: 38 QCNSKCSFRCSATSHKKPCMFFCLKCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97
>sp|Q6FVE6|PFA4_CANGA Palmitoyltransferase PFA4 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=PFA4 PE=3
SV=1
Length = 376
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 71 CARCKCVPPGTSGHLEVCPCYATMTTHHGRRKCP 104
C +CKC P S H + C M HH CP
Sbjct: 80 CKKCKCYKPERSHHCKTCNQCVLMMDHH----CP 109
>sp|Q00790|NOSR_PSEST Regulatory protein NosR OS=Pseudomonas stutzeri GN=nosR PE=4 SV=1
Length = 724
Score = 29.3 bits (64), Expect = 8.4, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Query: 59 RPNLCHRACGTCCARCKCV---PPGTSGHLEVCPCYATMTTHHGRRKCP 104
R C C C C+ P G H E C T+H KCP
Sbjct: 647 RRKECGNPCQICANECEVQAIHPDGHINHNECHYCLDCQMTYHNENKCP 695
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.132 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,967,324
Number of Sequences: 539616
Number of extensions: 1232652
Number of successful extensions: 4130
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 4053
Number of HSP's gapped (non-prelim): 129
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)