BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034082
MASSNPETESNNGSSIAKEPEKPQIEAFRMPTMEEMRAQEVWNNCAVRSVASGVMECSLI
LYYNSCIYRCCIPGDSGGPKAACAGCAGFAAFSVLIEKFLDRHT

High Scoring Gene Products

Symbol, full name Information P value
MEE67
AT3G10110 		protein from Arabidopsis thaliana 7.4e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034082
        (104 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2100088 - symbol:MEE67 "AT3G10110" species:370...   151  7.4e-11   1


>TAIR|locus:2100088 [details] [associations]
            symbol:MEE67 "AT3G10110" species:3702 "Arabidopsis
            thaliana" [GO:0005744 "mitochondrial inner membrane presequence
            translocase complex" evidence=ISS] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0015031 "protein transport" evidence=ISS]
            [GO:0015450 "P-P-bond-hydrolysis-driven protein transmembrane
            transporter activity" evidence=ISS] [GO:0009793 "embryo development
            ending in seed dormancy" evidence=IMP] InterPro:IPR003397
            Pfam:PF02466 GO:GO:0016021 EMBL:CP002686 GO:GO:0009793
            EMBL:AC010927 eggNOG:COG5596 EMBL:DQ405268 EMBL:DQ405269
            EMBL:BT030038 IPI:IPI00545567 IPI:IPI00829337 RefSeq:NP_566368.1
            UniGene:At.39987 UniGene:At.41800 STRING:A2RVP7 PaxDb:Q9SR75
            PRIDE:A2RVP7 EnsemblPlants:AT3G10110.1 GeneID:820172
            KEGG:ath:AT3G10110 GeneFarm:3043 TAIR:At3g10110 InParanoid:A2RVP7
            OMA:MQSCPGK PhylomeDB:A2RVP7 ProtClustDB:CLSN2688232
            Genevestigator:A2RVP7 Uniprot:A2RVP7
        Length = 173

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 31/57 (54%), Positives = 39/57 (68%)

Query:     1 MASSNPETESNNGSS--IAKEPEKPQIEAFRMPTMEEMRAQEVWNNCAVRSVASGVM 55
             MA S+    +   SS  +A +    QI+  RMPT+EE+RAQEVWNNCAVR+V SGVM
Sbjct:     1 MADSSAAEPTTGASSPPVASDENSTQIQPIRMPTIEEIRAQEVWNNCAVRAVTSGVM 57

 Score = 86 (35.3 bits), Expect = 0.00095, P = 0.00095
 Identities = 29/85 (34%), Positives = 35/85 (41%)

Query:    32 TMEEMRAQEVWNNC---AVRSVASGVMECSLILY------YNSCIYRCCIPGDS---GGP 79
             T ++M  Q  WN+C   AV  +     EC +          N+ I  C   G     GGP
Sbjct:    90 TAKQM-GQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGGP 148

Query:    80 KXXXXXXXXXXXXSVLIEKFLDRHT 104
             K            SVLIEKF DRHT
Sbjct:   149 KAACIGCAGFATFSVLIEKFFDRHT 173


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.392    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      104        92   0.00091  102 3  11 22  0.38    30
                                                     29  0.40    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  124 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.85u 0.20s 10.05t   Elapsed:  00:00:00
  Total cpu time:  9.85u 0.20s 10.05t   Elapsed:  00:00:00
  Start:  Fri May 10 14:09:01 2013   End:  Fri May 10 14:09:01 2013

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