Query 034082
Match_columns 104
No_of_seqs 126 out of 154
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 16:13:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034082.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034082hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1o8ca2 c.2.1.1 (A:116-192) Hy 14.8 40 0.0029 19.7 1.8 15 79-93 4-18 (77)
2 d2imja1 d.17.4.23 (A:5-159) Hy 12.6 47 0.0034 22.9 1.9 33 20-52 2-37 (155)
3 d1oh0a_ d.17.4.3 (A:) Delta-5- 10.3 84 0.0061 17.7 2.3 17 30-46 1-19 (125)
4 d1l8ya_ a.21.1.1 (A:) Nucleola 9.1 1E+02 0.0074 19.1 2.5 18 27-44 4-21 (84)
5 d1e7ua4 d.144.1.4 (A:726-1094) 6.6 1.7E+02 0.012 21.2 3.1 20 37-56 199-218 (369)
6 d1sxjb1 a.80.1.1 (B:231-322) R 5.7 1.6E+02 0.012 16.7 2.1 22 31-54 1-22 (92)
7 d2uuyb1 g.8.1.3 (B:24-74) Tryp 5.5 71 0.0051 18.1 0.3 9 67-75 31-39 (51)
8 d1th5a1 d.52.8.1 (A:154-226) N 5.0 38 0.0028 20.0 -1.3 18 82-102 44-61 (73)
9 d1fh0a_ d.3.1.1 (A:) (Pro)cath 4.8 1.2E+02 0.0088 18.8 1.1 19 82-100 21-39 (221)
10 d1t98a1 a.4.5.65 (A:8-118) Chr 4.7 1.3E+02 0.0093 19.5 1.2 8 95-102 103-110 (111)
No 1
>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}
Probab=14.78 E-value=40 Score=19.70 Aligned_cols=15 Identities=47% Similarity=0.594 Sum_probs=12.7
Q ss_pred hhHHhhhhHHHHHHH
Q 034082 79 PKAACAGCAGFAAFS 93 (104)
Q Consensus 79 p~Aa~~GcagFAAFS 93 (104)
.+|+.+|++||-|+-
T Consensus 4 ~eAa~lg~aGlTA~~ 18 (77)
T d1o8ca2 4 RKAMIIGTAGFTAML 18 (77)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHH
Confidence 479999999998864
No 2
>d2imja1 d.17.4.23 (A:5-159) Hypothetical protein PFL3262 {Pseudomonas fluorescens [TaxId: 294]}
Probab=12.62 E-value=47 Score=22.89 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=22.6
Q ss_pred CCCccccccCCCCHHH--HHHHHHHhh-hhhHHHhh
Q 034082 20 PEKPQIEAFRMPTMEE--MRAQEVWNN-CAVRSVAS 52 (104)
Q Consensus 20 ~e~~~~~~~~~~t~ee--~~~~~~mes-C~~Ksv~S 52 (104)
+.+++++|+...|.-+ +..++.+|| ++-|..++
T Consensus 2 e~rpPlPPFt~etA~~KVr~AEdaWNsrdP~~Vala 37 (155)
T d2imja1 2 QVRPPLPPFTRESAIEKIRLAEDGWNSRDPERVSLA 37 (155)
T ss_dssp CCCSSCSSCCHHHHHHHHHHHHHHHTTTCHHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhccCCchheeec
Confidence 3467888888776444 448999999 66665543
No 3
>d1oh0a_ d.17.4.3 (A:) Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI {Pseudomonas putida [TaxId: 303]}
Probab=10.34 E-value=84 Score=17.67 Aligned_cols=17 Identities=18% Similarity=0.292 Sum_probs=10.9
Q ss_pred CCCHHHHH--HHHHHhhhh
Q 034082 30 MPTMEEMR--AQEVWNNCA 46 (104)
Q Consensus 30 ~~t~ee~~--~~~~mesC~ 46 (104)
|||+|+++ +++.++.+.
T Consensus 1 mpt~e~~~~~v~~y~~a~~ 19 (125)
T d1oh0a_ 1 LPTAQEVQGLMARYIELVD 19 (125)
T ss_dssp CCCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 57777776 666665543
No 4
>d1l8ya_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream binding factor 1, UBF-1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=9.08 E-value=1e+02 Score=19.08 Aligned_cols=18 Identities=22% Similarity=0.137 Sum_probs=13.6
Q ss_pred ccCCCCHHHHHHHHHHhh
Q 034082 27 AFRMPTMEEMRAQEVWNN 44 (104)
Q Consensus 27 ~~~~~t~ee~~~~~~mes 44 (104)
|..++|.||+++|.+.-+
T Consensus 4 petpktaeeiWQqsvIgd 21 (84)
T d1l8ya_ 4 PESPKRAEEIWQQSVIGD 21 (84)
T ss_dssp CCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 456778999999876554
No 5
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=6.60 E-value=1.7e+02 Score=21.21 Aligned_cols=20 Identities=25% Similarity=0.252 Sum_probs=14.6
Q ss_pred HHHHHHhhhhhHHHhhhhhh
Q 034082 37 RAQEVWNNCAVRSVASGVME 56 (104)
Q Consensus 37 ~~~~~mesC~~Ksv~SgVmG 56 (104)
..+++..||+.-++++-|+|
T Consensus 199 ~~~nF~~S~A~~sv~~YiLG 218 (369)
T d1e7ua4 199 AVERFVYSCAGYCVATFVLG 218 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 47888999988776655554
No 6
>d1sxjb1 a.80.1.1 (B:231-322) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.74 E-value=1.6e+02 Score=16.71 Aligned_cols=22 Identities=5% Similarity=0.013 Sum_probs=14.9
Q ss_pred CCHHHHHHHHHHhhhhhHHHhhhh
Q 034082 31 PTMEEMRAQEVWNNCAVRSVASGV 54 (104)
Q Consensus 31 ~t~ee~~~~~~mesC~~Ksv~SgV 54 (104)
|.|++++ ++..+|-|+....-+
T Consensus 1 P~P~~I~--~il~~~~f~~a~~~l 22 (92)
T d1sxjb1 1 PHPLIVK--KMLLASNLEDSIQIL 22 (92)
T ss_dssp CCHHHHH--HHHSCSSHHHHHHHH
T ss_pred CCHHHHH--HHHHhCCHHHHHHHH
Confidence 5666554 557899888766554
No 7
>d2uuyb1 g.8.1.3 (B:24-74) Tryptase inhibitor {Brown ear tick (Rhipicephalus appendiculatus) [TaxId: 34631]}
Probab=5.54 E-value=71 Score=18.06 Aligned_cols=9 Identities=33% Similarity=0.995 Sum_probs=8.4
Q ss_pred hccccccCC
Q 034082 67 IYRCCIPGD 75 (104)
Q Consensus 67 ~~aGc~TGg 75 (104)
+|-||-|||
T Consensus 31 vyegcytgg 39 (51)
T d2uuyb1 31 VYEGCYTGG 39 (51)
T ss_dssp EEEESCCSS
T ss_pred hhccccccc
Confidence 899999999
No 8
>d1th5a1 d.52.8.1 (A:154-226) NifU-like protein 1, NIFUL1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=4.96 E-value=38 Score=19.96 Aligned_cols=18 Identities=17% Similarity=0.169 Sum_probs=12.8
Q ss_pred HhhhhHHHHHHHHHHHHHhhh
Q 034082 82 ACAGCAGFAAFSVLIEKFLDR 102 (104)
Q Consensus 82 a~~GcagFAAFS~aId~~m~~ 102 (104)
+|.||. .....|+..++.
T Consensus 44 aC~gC~---Tl~~gIe~~L~~ 61 (73)
T d1th5a1 44 PAAVVR---TVRIAVSKKLRE 61 (73)
T ss_dssp SSSSSS---SHHHHHHHHHHH
T ss_pred CCcccc---hHHHHHHHHHHH
Confidence 567774 677788888764
No 9
>d1fh0a_ d.3.1.1 (A:) (Pro)cathepsin V {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.75 E-value=1.2e+02 Score=18.77 Aligned_cols=19 Identities=26% Similarity=0.614 Sum_probs=12.8
Q ss_pred HhhhhHHHHHHHHHHHHHh
Q 034082 82 ACAGCAGFAAFSVLIEKFL 100 (104)
Q Consensus 82 a~~GcagFAAFS~aId~~m 100 (104)
-+..|-+||+-+++=+++.
T Consensus 21 ~cGsCwAfA~~~~~e~~~~ 39 (221)
T d1fh0a_ 21 QCGSCWAFSATGALEGQMF 39 (221)
T ss_dssp SSCCHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHH
Confidence 3778999988765544433
No 10
>d1t98a1 a.4.5.65 (A:8-118) Chromosome partition protein MukF (KicB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=4.70 E-value=1.3e+02 Score=19.54 Aligned_cols=8 Identities=0% Similarity=0.497 Sum_probs=5.3
Q ss_pred HHHHHhhh
Q 034082 95 LIEKFLDR 102 (104)
Q Consensus 95 aId~~m~~ 102 (104)
++|||+|+
T Consensus 103 I~dYyirq 110 (111)
T d1t98a1 103 ITDYYIRQ 110 (111)
T ss_dssp HHHHHHSC
T ss_pred hHHhhhcc
Confidence 56777765
Done!