Your job contains 1 sequence.
>034084
MANTMARSFLQVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVL
EVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034084
(104 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2196469 - symbol:TIF3H1 "AT1G10840" species:37... 466 3.1e-44 1
DICTYBASE|DDB_G0281153 - symbol:eif3H "eukaryotic transla... 297 2.5e-26 1
ZFIN|ZDB-GENE-040808-19 - symbol:eif3ha "eukaryotic trans... 224 1.4e-18 1
ASPGD|ASPL0000060185 - symbol:AN1270 species:162425 "Emer... 224 2.5e-18 1
ZFIN|ZDB-GENE-051030-42 - symbol:eif3hb "eukaryotic trans... 220 3.7e-18 1
UNIPROTKB|Q5PPY6 - symbol:eif3h "Eukaryotic translation i... 218 6.7e-18 1
UNIPROTKB|B5RI54 - symbol:eif3h "Eukaryotic translation i... 218 8.4e-18 1
UNIPROTKB|Q6P381 - symbol:eif3h "Eukaryotic translation i... 217 9.0e-18 1
UNIPROTKB|B5FY35 - symbol:EIF3H "Eukaryotic translation i... 217 1.2e-17 1
UNIPROTKB|Q5ZLE6 - symbol:EIF3H "Eukaryotic translation i... 213 3.5e-17 1
UNIPROTKB|Q56JZ5 - symbol:EIF3H "Eukaryotic translation i... 212 4.9e-17 1
UNIPROTKB|O15372 - symbol:EIF3H "Eukaryotic translation i... 212 4.9e-17 1
MGI|MGI:1915385 - symbol:Eif3h "eukaryotic translation in... 212 4.9e-17 1
RGD|735178 - symbol:Eif3h "eukaryotic translation initiat... 212 4.9e-17 1
UNIPROTKB|B3KS98 - symbol:EIF3S3 "Eukaryotic translation ... 212 5.9e-17 1
FB|FBgn0022023 - symbol:eIF-3p40 "Eukaryotic initiation f... 195 3.5e-15 1
UNIPROTKB|A4QT78 - symbol:MGG_05156 "Eukaryotic translati... 129 5.1e-14 2
UNIPROTKB|F1S1J9 - symbol:EIF3H "Uncharacterized protein"... 88 3.0e-08 2
POMBASE|SPAC821.05 - symbol:SPAC821.05 "translation initi... 132 4.1e-08 1
FB|FBgn0037270 - symbol:CG9769 species:7227 "Drosophila m... 123 2.3e-07 1
CGD|CAL0004868 - symbol:orf19.6748 species:5476 "Candida ... 120 7.0e-07 1
UNIPROTKB|Q5ADU3 - symbol:CaO19.14040 "Potential translat... 120 7.0e-07 1
UNIPROTKB|G4N5N6 - symbol:MGG_05274 "COP9 signalosome com... 111 7.4e-06 1
TAIR|locus:2166449 - symbol:RPN8A "AT5G05780" species:370... 108 1.3e-05 1
TAIR|locus:2074653 - symbol:MEE34 "AT3G11270" species:370... 102 5.9e-05 1
CGD|CAL0003932 - symbol:orf19.7264 species:5476 "Candida ... 99 0.00013 1
WB|WBGene00018135 - symbol:F37A4.5 species:6239 "Caenorha... 99 0.00013 1
UNIPROTKB|E1BLZ8 - symbol:EIF3F "Uncharacterized protein"... 100 0.00014 1
ASPGD|ASPL0000041877 - symbol:csnE species:162425 "Emeric... 99 0.00014 1
UNIPROTKB|E1C050 - symbol:EIF3F "Uncharacterized protein"... 98 0.00018 1
ASPGD|ASPL0000076795 - symbol:AN4492 species:162425 "Emer... 97 0.00024 1
WB|WBGene00001229 - symbol:eif-3.F species:6239 "Caenorha... 96 0.00024 1
UNIPROTKB|O00303 - symbol:EIF3F "Eukaryotic translation i... 97 0.00026 1
UNIPROTKB|A5A6I3 - symbol:EIF3F "Eukaryotic translation i... 97 0.00027 1
UNIPROTKB|Q4R5B8 - symbol:EIF3F "Eukaryotic translation i... 97 0.00027 1
MGI|MGI:1913335 - symbol:Eif3f "eukaryotic translation in... 97 0.00027 1
UNIPROTKB|B3KSH1 - symbol:EIF3F "HCG1784554, isoform CRA_... 97 0.00028 1
SGD|S000001900 - symbol:RPN11 "Metalloprotease subunit of... 95 0.00034 1
GENEDB_PFALCIPARUM|MAL13P1.343 - symbol:MAL13P1.343 "prot... 95 0.00035 1
UNIPROTKB|Q8ID28 - symbol:MAL13P1.343 "Proteasome regulat... 95 0.00035 1
POMBASE|SPBC4C3.07 - symbol:SPBC4C3.07 "translation initi... 94 0.00042 1
DICTYBASE|DDB_G0293254 - symbol:eif3F "eukaryotic transla... 93 0.00048 1
POMBASE|SPAC1687.13c - symbol:csn5 "COP9/signalosome comp... 93 0.00053 1
DICTYBASE|DDB_G0279633 - symbol:psmD7 "26S proteasome non... 93 0.00061 1
DICTYBASE|DDB_G0272566 - symbol:psmD14 "putative multidru... 92 0.00071 1
>TAIR|locus:2196469 [details] [associations]
symbol:TIF3H1 "AT1G10840" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0003743 EMBL:AC007354
eggNOG:COG1310 HOGENOM:HOG000248787 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 EMBL:AF285833 EMBL:AY054641 EMBL:AY081546
EMBL:BT000765 EMBL:AY087338 IPI:IPI00526917 PIR:B86242
RefSeq:NP_563880.1 UniGene:At.17013 ProteinModelPortal:Q9C5Z2
IntAct:Q9C5Z2 STRING:Q9C5Z2 PaxDb:Q9C5Z2 PRIDE:Q9C5Z2
EnsemblPlants:AT1G10840.1 GeneID:837627 KEGG:ath:AT1G10840
TAIR:At1g10840 InParanoid:Q9C5Z2 PhylomeDB:Q9C5Z2
ProtClustDB:CLSN2687763 Genevestigator:Q9C5Z2 Uniprot:Q9C5Z2
Length = 337
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 89/102 (87%), Positives = 96/102 (94%)
Query: 4 TMARSFLQVAAAEE-VAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEV 62
TMARSFLQ + +E VAPPLRVVQIEGL +LKIIKHCKEFSP LVTGQLLGLDVGSVLEV
Sbjct: 3 TMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVLEV 62
Query: 63 TNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
TNCFPFP++++DEEIEADGANYQLEMMRCLREVNVDNNTVGW
Sbjct: 63 TNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
>DICTYBASE|DDB_G0281153 [details] [associations]
symbol:eif3H "eukaryotic translation initiation
factor 3 (eIF3) subunit H" species:44689 "Dictyostelium discoideum"
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0281153 GO:GO:0005737
GenomeReviews:CM000152_GR GO:GO:0006446 EMBL:AAFI02000040
GO:GO:0003743 eggNOG:NOG314046 KO:K03247 OMA:NCFPFPK HAMAP:MF_03007
RefSeq:XP_640846.1 STRING:Q54UD0 PRIDE:Q54UD0
EnsemblProtists:DDB0233918 GeneID:8622902 KEGG:ddi:DDB_G0281153
ProtClustDB:CLSZ2430573 Uniprot:Q54UD0
Length = 319
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 56/83 (67%), Positives = 70/83 (84%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEADG 81
L VVQI+GLV+LKIIK CKE+ P LV GQLLGLD+G+ LEV+NCFPFP +++++E
Sbjct: 16 LDVVQIDGLVVLKIIKQCKEYLPELVPGQLLGLDIGTSLEVSNCFPFPPRDQEDENSESI 75
Query: 82 ANYQLEMMRCLREVNVDNNTVGW 104
A+YQLEMMR LREVN+D+NTVGW
Sbjct: 76 ADYQLEMMRFLREVNIDSNTVGW 98
>ZFIN|ZDB-GENE-040808-19 [details] [associations]
symbol:eif3ha "eukaryotic translation initiation
factor 3, subunit H, a" species:7955 "Danio rerio" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA;ISS]
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007420 "brain
development" evidence=IMP] [GO:0048882 "lateral line development"
evidence=IMP] [GO:0001944 "vasculature development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-040808-19 GO:GO:0007420 GO:GO:0006413 GO:GO:0003743
GO:GO:0001944 GO:GO:0005852 EMBL:BC079514 IPI:IPI00496845
RefSeq:NP_001003763.1 UniGene:Dr.150579 STRING:Q6AXJ2
MEROPS:M67.971 PRIDE:Q6AXJ2 Ensembl:ENSDART00000044634
Ensembl:ENSDART00000110583 GeneID:445306 KEGG:dre:445306 CTD:445306
eggNOG:NOG314046 GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
NextBio:20832051 ArrayExpress:Q6AXJ2 Bgee:Q6AXJ2 GO:GO:0048882
HAMAP:MF_03007 Uniprot:Q6AXJ2
Length = 335
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 21 PLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIE 78
P++ +Q++GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q ++++E
Sbjct: 18 PVKQIQVDGLVVLKIIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDVE 76
Query: 79 ADGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 77 FDEVQYQMEMMRSLRHVNIDHLHVGW 102
>ASPGD|ASPL0000060185 [details] [associations]
symbol:AN1270 species:162425 "Emericella nidulans"
[GO:0016282 "eukaryotic 43S preinitiation complex" evidence=IEA]
[GO:0071541 "eukaryotic translation initiation factor 3 complex,
eIF3m" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030437
"ascospore formation" evidence=IEA] [GO:0071585 "detoxification of
cadmium ion" evidence=IEA] [GO:0071276 "cellular response to
cadmium ion" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005737 EMBL:BN001308 EMBL:AACD01000017
GO:GO:0003743 eggNOG:NOG314046 HOGENOM:HOG000248787 KO:K03247
OMA:NCFPFPK HAMAP:MF_03007 RefSeq:XP_658874.1 STRING:Q5BDW0
PRIDE:Q5BDW0 GeneID:2877041 KEGG:ani:AN1270.2 OrthoDB:EOG4T1MWT
Uniprot:Q5BDW0
Length = 366
Score = 224 (83.9 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 50/105 (47%), Positives = 62/105 (59%)
Query: 15 AEEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEED 74
AE+ PL V++E LV++KIIKHC + P TG ++G+DV VLE+TN FPFP+ E
Sbjct: 2 AEKEVTPLTAVKVEALVVMKIIKHCSQVFPTTATGSIVGMDVDGVLEITNTFPFPVVEVP 61
Query: 75 EEIEADGA--N-------------YQLEMMRCLREVNVDNNTVGW 104
E D A N YQ EM+R LREVNVD N VGW
Sbjct: 62 PESHFDNAAPNPAAAAPRAKANTVYQAEMIRMLREVNVDANNVGW 106
>ZFIN|ZDB-GENE-051030-42 [details] [associations]
symbol:eif3hb "eukaryotic translation initiation
factor 3, subunit H, b" species:7955 "Danio rerio" [GO:0006413
"translational initiation" evidence=IEA;ISS] [GO:0003743
"translation initiation factor activity" evidence=IEA;ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-051030-42 GO:GO:0007420 GO:GO:0007507 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF HAMAP:MF_03007
EMBL:BC086809 EMBL:BC107824 IPI:IPI00655366 RefSeq:NP_001030341.1
UniGene:Dr.86151 STRING:Q5PR67 PRIDE:Q5PR67 GeneID:567151
KEGG:dre:567151 CTD:567151 NextBio:20888545 Uniprot:Q5PR67
Length = 333
Score = 220 (82.5 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 45/86 (52%), Positives = 60/86 (69%)
Query: 21 PLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIE 78
P++ +QIEGLV++KIIKH +E +V G LLGL V LE+TNCFPFP Q +++ +
Sbjct: 16 PVKQIQIEGLVVMKIIKHYQEEGQGSEVVQGVLLGLVVEDQLEITNCFPFP-QHTEDDAD 74
Query: 79 ADGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 75 FDEVQYQMEMMRSLRHVNIDHLHVGW 100
>UNIPROTKB|Q5PPY6 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8355 "Xenopus laevis" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 KO:K03247
HAMAP:MF_03007 CTD:8667 EMBL:BC087438 RefSeq:NP_001088779.1
UniGene:Xl.7704 GeneID:496043 KEGG:xla:496043
Xenbase:XB-GENE-958120 Uniprot:Q5PPY6
Length = 334
Score = 218 (81.8 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 45/85 (52%), Positives = 60/85 (70%)
Query: 22 LRVVQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA 79
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++++
Sbjct: 18 VKQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDVDF 76
Query: 80 DGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 77 DEVQYQMEMMRSLRHVNIDHLHVGW 101
>UNIPROTKB|B5RI54 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8030 "Salmo salar" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 HAMAP:MF_03007
EMBL:BT043978 UniGene:Ssa.31091 Uniprot:B5RI54
Length = 344
Score = 218 (81.8 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 45/86 (52%), Positives = 60/86 (69%)
Query: 21 PLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIE 78
P++ +QIEGLV+LK+IKH +E +V G LLGL V LE+TNCFPFP Q +++ +
Sbjct: 27 PVKQIQIEGLVVLKMIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDAD 85
Query: 79 ADGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 86 FDEVQYQMEMMRSLRHVNIDHLHVGW 111
>UNIPROTKB|Q6P381 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 HAMAP:MF_03007
CTD:8667 EMBL:BC064151 RefSeq:NP_989359.1 UniGene:Str.1956
ProteinModelPortal:Q6P381 STRING:Q6P381 GeneID:394989
KEGG:xtr:394989 Xenbase:XB-GENE-958115 InParanoid:Q6P381
OrthoDB:EOG4VQ9PV Uniprot:Q6P381
Length = 335
Score = 217 (81.4 bits), Expect = 9.0e-18, P = 9.0e-18
Identities = 47/94 (50%), Positives = 63/94 (67%)
Query: 13 AAAEEVAPPLRVVQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPI 70
A E A ++ VQI+G+V+LKIIKH +E +V G LLGL V LE+TNCFPFP
Sbjct: 12 ATVAETA--VKQVQIDGMVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFP- 68
Query: 71 QEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
Q +++++ D YQ+EMMR LR VN+D+ VGW
Sbjct: 69 QHTEDDVDFDEVQYQMEMMRSLRHVNIDHLHVGW 102
>UNIPROTKB|B5FY35 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:59729 "Taeniopygia guttata" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:DQ213760 RefSeq:NP_001232560.1
UniGene:Tgu.10677 STRING:B5FY35 PRIDE:B5FY35 GeneID:100190645
KEGG:tgu:100190645 Uniprot:B5FY35
Length = 348
Score = 217 (81.4 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 49/96 (51%), Positives = 65/96 (67%)
Query: 11 QVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPF 68
+ AAA + A ++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPF
Sbjct: 23 KAAAAGDSA--VKQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPF 80
Query: 69 PIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
P Q +++ + D YQ+EMMR LR VN+D+ VGW
Sbjct: 81 P-QHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGW 115
>UNIPROTKB|Q5ZLE6 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9031 "Gallus gallus" [GO:0006413 "translational
initiation" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:AJ719788 IPI:IPI00592172
RefSeq:NP_001026122.1 UniGene:Gga.4721 STRING:Q5ZLE6 PRIDE:Q5ZLE6
Ensembl:ENSGALT00000025971 GeneID:420288 KEGG:gga:420288
InParanoid:Q5ZLE6 NextBio:20823227 Uniprot:Q5ZLE6
Length = 348
Score = 213 (80.0 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA 79
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++ +
Sbjct: 32 VKQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFP-QHTEDDADF 90
Query: 80 DGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 91 DEVQYQMEMMRSLRHVNIDHLHVGW 115
>UNIPROTKB|Q56JZ5 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9913 "Bos taurus" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:AY911332 EMBL:BC102096 IPI:IPI00714818
RefSeq:NP_001020493.1 UniGene:Bt.16723 STRING:Q56JZ5 PRIDE:Q56JZ5
Ensembl:ENSBTAT00000018645 GeneID:506873 KEGG:bta:506873 CTD:8667
InParanoid:Q56JZ5 NextBio:20867779 Uniprot:Q56JZ5
Length = 352
Score = 212 (79.7 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA 79
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++ +
Sbjct: 36 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDADF 94
Query: 80 DGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGW 119
>UNIPROTKB|O15372 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9606 "Homo sapiens" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006413 "translational initiation"
evidence=IC;IDA;TAS] [GO:0006446 "regulation of translational
initiation" evidence=TAS] [GO:0003743 "translation initiation
factor activity" evidence=IC;IDA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006412 "translation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_17015
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
GO:GO:0006413 GO:GO:0006446 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 HOVERGEN:HBG000883 KO:K03247
OrthoDB:EOG4SJ5FF HAMAP:MF_03007 Reactome:REACT_1762 CTD:8667
EMBL:U54559 EMBL:AF092576 EMBL:AF092569 EMBL:AF092570 EMBL:AF092571
EMBL:AF092572 EMBL:AF092573 EMBL:AF092574 EMBL:AF092575
EMBL:BC000386 IPI:IPI00977658 RefSeq:NP_003747.1 UniGene:Hs.492599
ProteinModelPortal:O15372 SMR:O15372 DIP:DIP-33689N IntAct:O15372
MINT:MINT-5000446 STRING:O15372 PhosphoSite:O15372 PaxDb:O15372
PRIDE:O15372 DNASU:8667 Ensembl:ENST00000521861 GeneID:8667
KEGG:hsa:8667 UCSC:uc003yoa.3 GeneCards:GC08M117727 HGNC:HGNC:3273
HPA:HPA023117 HPA:HPA023553 MIM:603912 neXtProt:NX_O15372
PharmGKB:PA162384854 InParanoid:O15372 PhylomeDB:O15372
ChiTaRS:EIF3H GenomeRNAi:8667 NextBio:32511 ArrayExpress:O15372
Bgee:O15372 CleanEx:HS_EIF3H Genevestigator:O15372
GermOnline:ENSG00000147677 Uniprot:O15372
Length = 352
Score = 212 (79.7 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA 79
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++ +
Sbjct: 36 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDADF 94
Query: 80 DGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGW 119
>MGI|MGI:1915385 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3,
subunit H" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1915385 GO:GO:0006413 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 GeneTree:ENSGT00550000074674
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 CTD:8667 EMBL:BC014755 IPI:IPI00128202
RefSeq:NP_542366.1 UniGene:Mm.289800 ProteinModelPortal:Q91WK2
SMR:Q91WK2 MINT:MINT-4098428 STRING:Q91WK2 PhosphoSite:Q91WK2
PaxDb:Q91WK2 PRIDE:Q91WK2 Ensembl:ENSMUST00000022925 GeneID:68135
KEGG:mmu:68135 InParanoid:Q91WK2 NextBio:326504 Bgee:Q91WK2
Genevestigator:Q91WK2 GermOnline:ENSMUSG00000022312 Uniprot:Q91WK2
Length = 352
Score = 212 (79.7 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA 79
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++ +
Sbjct: 36 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDADF 94
Query: 80 DGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGW 119
>RGD|735178 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3, subunit
H" species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;ISS] [GO:0006413
"translational initiation" evidence=ISO;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
RGD:735178 GO:GO:0043231 GO:GO:0032403 GO:GO:0006413 GO:GO:0003743
EMBL:CH473950 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:BC060586 IPI:IPI00208038
RefSeq:NP_942046.1 RefSeq:XP_003750149.1 UniGene:Rn.129213
STRING:Q6P9U8 PhosphoSite:Q6P9U8 PRIDE:Q6P9U8
Ensembl:ENSRNOT00000005786 GeneID:100911110 GeneID:299899
KEGG:rno:100911110 KEGG:rno:299899 UCSC:RGD:735178
InParanoid:Q6P9U8 NextBio:645940 Genevestigator:Q6P9U8
Uniprot:Q6P9U8
Length = 352
Score = 212 (79.7 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA 79
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++ +
Sbjct: 36 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDADF 94
Query: 80 DGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 95 DEVQYQMEMMRSLRHVNIDHLHVGW 119
>UNIPROTKB|B3KS98 [details] [associations]
symbol:EIF3S3 "Eukaryotic translation initiation factor 3,
subunit 3 gamma, 40kDa, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 EMBL:CH471060
GO:GO:0003743 HOGENOM:HOG000248787 HOVERGEN:HBG000883 OMA:NCFPFPK
UniGene:Hs.492599 HGNC:HGNC:3273 ChiTaRS:EIF3H EMBL:AP002905
EMBL:AC023520 EMBL:AK093128 IPI:IPI00647650
ProteinModelPortal:B3KS98 SMR:B3KS98 STRING:B3KS98 PRIDE:B3KS98
Ensembl:ENST00000276682 UCSC:uc003yob.3 ArrayExpress:B3KS98
Bgee:B3KS98 Uniprot:B3KS98
Length = 366
Score = 212 (79.7 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA 79
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP Q +++ +
Sbjct: 50 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFP-QHTEDDADF 108
Query: 80 DGANYQLEMMRCLREVNVDNNTVGW 104
D YQ+EMMR LR VN+D+ VGW
Sbjct: 109 DEVQYQMEMMRSLRHVNIDHLHVGW 133
>FB|FBgn0022023 [details] [associations]
symbol:eIF-3p40 "Eukaryotic initiation factor 3 p40 subunit"
species:7227 "Drosophila melanogaster" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
EMBL:AE014134 GO:GO:0022008 GO:GO:0003743 eggNOG:COG1310
GO:GO:0005852 GeneTree:ENSGT00550000074674 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 EMBL:AF160896 EMBL:BT071794 RefSeq:NP_524834.2
RefSeq:NP_995631.1 UniGene:Dm.1462 ProteinModelPortal:Q9U9Q4
IntAct:Q9U9Q4 MINT:MINT-1564430 STRING:Q9U9Q4 PaxDb:Q9U9Q4
PRIDE:Q9U9Q4 EnsemblMetazoa:FBtr0079030 EnsemblMetazoa:FBtr0079031
GeneID:45682 KEGG:dme:Dmel_CG9124 UCSC:CG9124-RA CTD:45682
FlyBase:FBgn0022023 InParanoid:Q9U9Q4 OrthoDB:EOG4JWSW1
PhylomeDB:Q9U9Q4 ChiTaRS:eIF-3p40 GenomeRNAi:45682 NextBio:838284
Bgee:Q9U9Q4 Uniprot:Q9U9Q4
Length = 338
Score = 195 (73.7 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 48/106 (45%), Positives = 62/106 (58%)
Query: 1 MANTMARSFLQVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGS 58
MAN R A E+ + VQ +GL ++K++KHC E S L G LLGL V
Sbjct: 1 MANRANR---HAARTEDSDNTINYVQCDGLAVMKMVKHCHEESSNMDLAQGALLGLVVDK 57
Query: 59 VLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
LE+TNCFPFP + DE ++ + YQL +MR LR VNVD+ VGW
Sbjct: 58 CLEITNCFPFP-KSGDETMDEE--MYQLTVMRRLRRVNVDHLHVGW 100
>UNIPROTKB|A4QT78 [details] [associations]
symbol:MGG_05156 "Eukaryotic translation initiation factor
3 subunit H" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005737 EMBL:CM001233 GO:GO:0003743
eggNOG:NOG314046 KO:K03247 HAMAP:MF_03007 OrthoDB:EOG4T1MWT
RefSeq:XP_003712690.1 ProteinModelPortal:A4QT78 STRING:A4QT78
EnsemblFungi:MGG_05156T0 GeneID:2675614 KEGG:mgr:MGG_05156
Uniprot:A4QT78
Length = 363
Score = 129 (50.5 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 21 PLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFP 69
P++ VQ+E LV++KI KHC P + TG ++G+D +++EVTN FP
Sbjct: 9 PIKSVQVEALVVMKIAKHCSSSFPTIATGSIVGMDNDTLVEVTNSLNFP 57
Score = 79 (32.9 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 84 YQLEMMRCLREVNVDNNTVGW 104
YQ EM++ LREVNVD N VGW
Sbjct: 89 YQAEMIKHLREVNVDANCVGW 109
>UNIPROTKB|F1S1J9 [details] [associations]
symbol:EIF3H "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0006413 GO:GO:0005852
GeneTree:ENSGT00550000074674 OMA:NCFPFPK EMBL:CU914669
Ensembl:ENSSSCT00000006602 Uniprot:F1S1J9
Length = 327
Score = 88 (36.0 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 71 QEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
+ +++ + D YQ+EMMR LR VN+D+ VGW
Sbjct: 61 EHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGW 94
Score = 65 (27.9 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 22 LRVVQIEGLVMLKIIKHCKE 41
++ VQI+GLV+LKIIKH +E
Sbjct: 36 VKQVQIDGLVVLKIIKHYQE 55
>POMBASE|SPAC821.05 [details] [associations]
symbol:SPAC821.05 "translation initiation factor eIF3h
(p40)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IDA] [GO:0006413 "translational initiation" evidence=IC]
[GO:0016282 "eukaryotic 43S preinitiation complex" evidence=IDA]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071540
"eukaryotic translation initiation factor 3 complex, eIF3e"
evidence=IDA] [GO:0071541 "eukaryotic translation initiation factor
3 complex, eIF3m" evidence=IDA] [GO:0071585 "detoxification of
cadmium ion" evidence=IMP] [GO:0003743 "translation initiation
factor activity" evidence=IC] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPAC821.05 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0071276 GO:GO:0071585
GO:GO:0003743 GO:GO:0030437 GO:GO:0004843 GO:GO:0002183
eggNOG:NOG314046 HOGENOM:HOG000248787 KO:K03247 HAMAP:MF_03007
GO:GO:0016282 GO:GO:0071540 GO:GO:0071541 OrthoDB:EOG4T1MWT
PIR:T41716 RefSeq:NP_593158.1 ProteinModelPortal:Q9UT48
STRING:Q9UT48 EnsemblFungi:SPAC821.05.1 GeneID:2543153
KEGG:spo:SPAC821.05 OMA:HEANNIA NextBio:20804180 Uniprot:Q9UT48
Length = 357
Score = 132 (51.5 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 19 APPLRVVQIEGLVMLKIIKHCKEFSPALVT-GQLLGLDVGSVLEVTNCFPFPIQEEDEEI 77
+PP+ V++E L+++ IIKHC++ P + T GQL+G+D+ VL+V++ F P E+EE
Sbjct: 14 SPPIERVELESLLVMNIIKHCRDSFPNMGTIGQLVGIDIDGVLQVSSSFESPSVLENEES 73
Query: 78 EAD----GANYQLE---MMRCLREVNVDNNTVGW 104
+ G Q M+ L+ + VGW
Sbjct: 74 AVNKSVSGKARQAHTEAMLNRLQYIGAVTGHVGW 107
>FB|FBgn0037270 [details] [associations]
symbol:CG9769 species:7227 "Drosophila melanogaster"
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0048102 "autophagic cell death" evidence=IEP] [GO:0035071
"salivary gland cell autophagic cell death" evidence=IEP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE014297
GO:GO:0035071 GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
EMBL:AY118972 RefSeq:NP_649489.1 UniGene:Dm.11029
ProteinModelPortal:Q9VN50 SMR:Q9VN50 IntAct:Q9VN50 MINT:MINT-891663
STRING:Q9VN50 MEROPS:M67.975 PaxDb:Q9VN50 PRIDE:Q9VN50
EnsemblMetazoa:FBtr0078892 GeneID:40587 KEGG:dme:Dmel_CG9769
UCSC:CG9769-RA FlyBase:FBgn0037270 InParanoid:Q9VN50 KO:K03249
OMA:HPVVLFQ OrthoDB:EOG43TXBB PhylomeDB:Q9VN50 ChiTaRS:CG9769
GenomeRNAi:40587 NextBio:819523 Bgee:Q9VN50 HAMAP:MF_03005
Uniprot:Q9VN50
Length = 280
Score = 123 (48.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 47 VTGQLLG-LDVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
V G LLG +D G V+EVTNCF P +E D+++EA+ +Y L+M R+VN + + VGW
Sbjct: 32 VIGTLLGSVDKG-VVEVTNCFCVPHKEHDDQVEAE-LSYALDMYDLNRKVNSNESVVGW 88
>CGD|CAL0004868 [details] [associations]
symbol:orf19.6748 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0016282 "eukaryotic 43S
preinitiation complex" evidence=IEA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0071540 "eukaryotic
translation initiation factor 3 complex, eIF3e" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030437 "ascospore
formation" evidence=IEA] [GO:0071313 "cellular response to
caffeine" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 CGD:CAL0004868 EMBL:AACQ01000029 EMBL:AACQ01000028
eggNOG:NOG314046 KO:K03247 RefSeq:XP_719728.1 RefSeq:XP_719845.1
ProteinModelPortal:Q5ADU3 STRING:Q5ADU3 GeneID:3638485
GeneID:3638582 KEGG:cal:CaO19.14040 KEGG:cal:CaO19.6748
Uniprot:Q5ADU3
Length = 328
Score = 120 (47.3 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 15 AEEVAPP-LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEE 73
A + P L V I V+L +++H E P L +G LLG + S+++VT+ FP+P ++
Sbjct: 2 ASKYTPATLNTVHISSSVLLSLLRHTSEHYPQLFSGALLGFEDESLIDVTHGFPYPYPDQ 61
Query: 74 DEE---IEADGANYQLEMMRCLREVNVDNNTVGW 104
E G YQ +++ +++ +GW
Sbjct: 62 YEGGSFRSRSGGQYQKDLLENFKKLGYGIEFLGW 95
>UNIPROTKB|Q5ADU3 [details] [associations]
symbol:CaO19.14040 "Potential translation initiation factor
eIF3-gamma-p40 subunit" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 CGD:CAL0004868 EMBL:AACQ01000029
EMBL:AACQ01000028 eggNOG:NOG314046 KO:K03247 RefSeq:XP_719728.1
RefSeq:XP_719845.1 ProteinModelPortal:Q5ADU3 STRING:Q5ADU3
GeneID:3638485 GeneID:3638582 KEGG:cal:CaO19.14040
KEGG:cal:CaO19.6748 Uniprot:Q5ADU3
Length = 328
Score = 120 (47.3 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 27/94 (28%), Positives = 48/94 (51%)
Query: 15 AEEVAPP-LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEE 73
A + P L V I V+L +++H E P L +G LLG + S+++VT+ FP+P ++
Sbjct: 2 ASKYTPATLNTVHISSSVLLSLLRHTSEHYPQLFSGALLGFEDESLIDVTHGFPYPYPDQ 61
Query: 74 DEE---IEADGANYQLEMMRCLREVNVDNNTVGW 104
E G YQ +++ +++ +GW
Sbjct: 62 YEGGSFRSRSGGQYQKDLLENFKKLGYGIEFLGW 95
>UNIPROTKB|G4N5N6 [details] [associations]
symbol:MGG_05274 "COP9 signalosome complex subunit 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 EMBL:CM001233 KO:K09613 MEROPS:M67.002
RefSeq:XP_003712833.1 ProteinModelPortal:G4N5N6
EnsemblFungi:MGG_05274T0 GeneID:2675301 KEGG:mgr:MGG_05274
Uniprot:G4N5N6
Length = 344
Score = 111 (44.1 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA-DGAN 83
V+I + ++K++ H + V G + G G+ L VT+ F P++ + + A D AN
Sbjct: 51 VRISAIALIKMVMHARSGGSLEVMGMMQGYVDGTALVVTDAFRLPVEGTETRVNAHDEAN 110
Query: 84 -YQLEMMRCLREVNVDNNTVGW 104
Y +E +R RE N VGW
Sbjct: 111 EYLVEYLRLSREQGRLENVVGW 132
>TAIR|locus:2166449 [details] [associations]
symbol:RPN8A "AT5G05780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000502
GO:GO:0009965 eggNOG:COG1310 EMBL:AB005237 InterPro:IPR024969
Pfam:PF13012 KO:K03038 EMBL:U54560 EMBL:AF378878 EMBL:BT002610
EMBL:AY087393 IPI:IPI00538047 RefSeq:NP_196197.1 UniGene:At.20537
UniGene:At.67787 ProteinModelPortal:O24412 SMR:O24412 IntAct:O24412
STRING:O24412 PaxDb:O24412 PRIDE:O24412 EnsemblPlants:AT5G05780.1
GeneID:830463 KEGG:ath:AT5G05780 TAIR:At5g05780
HOGENOM:HOG000209236 InParanoid:O24412 OMA:RSIIALH PhylomeDB:O24412
ProtClustDB:PLN03246 Genevestigator:O24412 GermOnline:AT5G05780
Uniprot:O24412
Length = 308
Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 29/101 (28%), Positives = 47/101 (46%)
Query: 10 LQVAAAEEV-APPLRVVQIEGLVMLKIIKHCKEF---SPALVTGQLLGLDVGSVLEVTNC 65
+ V +++ A + V + LV+L I+ H S V G LLG V++VTN
Sbjct: 1 MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60
Query: 66 FPFPIQEEDEE--IEADGANYQLEMMRCLREVNVDNNTVGW 104
+ P +E+D++ I NY M + +N + VGW
Sbjct: 61 YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGW 101
>TAIR|locus:2074653 [details] [associations]
symbol:MEE34 "AT3G11270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010564 "regulation of
cell cycle process" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009793
GO:GO:0030163 GO:GO:0000502 EMBL:AC073395 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 ProtClustDB:PLN03246
MEROPS:M67.973 EMBL:AY258412 EMBL:AK228032 IPI:IPI00536063
RefSeq:NP_187736.1 UniGene:At.39785 ProteinModelPortal:Q9C774
SMR:Q9C774 IntAct:Q9C774 STRING:Q9C774 PRIDE:Q9C774 DNASU:820298
EnsemblPlants:AT3G11270.1 GeneID:820298 KEGG:ath:AT3G11270
TAIR:At3g11270 InParanoid:Q9C774 OMA:INAKEHI PhylomeDB:Q9C774
Genevestigator:Q9C774 Uniprot:Q9C774
Length = 310
Score = 102 (41.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 10 LQVAAAEEV-APPLRVVQIEGLVMLKIIKH----CKEFSPALVTGQLLGLDVGSVLEVTN 64
+ V +++ A + V + LV+L I+ H K+ S +V G LLG ++VTN
Sbjct: 1 MDVIKTQQISARTIEKVIVHPLVLLSIVDHYNRVAKDTSKRVV-GVLLGSSSRGTVDVTN 59
Query: 65 CFPFPIQEEDEE--IEADGANYQLEMMRCLREVNVDNNTVGW 104
+ P +E+D++ I NY M + +N + VGW
Sbjct: 60 SYAVPFEEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGW 101
>CGD|CAL0003932 [details] [associations]
symbol:orf19.7264 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0000266 "mitochondrial fission"
evidence=IEA] [GO:0016559 "peroxisome fission" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 CGD:CAL0003932
eggNOG:COG1310 MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012
EMBL:AACQ01000092 HOGENOM:HOG000183690 KO:K03030 RefSeq:XP_715061.1
ProteinModelPortal:Q59ZS7 STRING:Q59ZS7 GeneID:3643326
KEGG:cal:CaO19.7264 Uniprot:Q59ZS7
Length = 312
Score = 99 (39.9 bits), Expect = 0.00013, P = 0.00013
Identities = 27/81 (33%), Positives = 38/81 (46%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPIQEEDEEIEADGAN 83
V I L +LK++KH + P V G +LG V + V + F P +EA
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDFTIHVHDVFAMPQSGTGVSVEAVDDV 92
Query: 84 YQLEMMRCLREVNVDNNTVGW 104
+Q +MM LR+ D VGW
Sbjct: 93 FQTKMMDMLRQTGRDQMVVGW 113
>WB|WBGene00018135 [details] [associations]
symbol:F37A4.5 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000003 eggNOG:COG1310
EMBL:FO081312 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
PIR:S44642 RefSeq:NP_498470.1 UniGene:Cel.10529
ProteinModelPortal:P41883 SMR:P41883 IntAct:P41883 STRING:P41883
MEROPS:M67.A10 PaxDb:P41883 PRIDE:P41883 EnsemblMetazoa:F37A4.5.1
EnsemblMetazoa:F37A4.5.2 GeneID:185404 KEGG:cel:CELE_F37A4.5
UCSC:F37A4.5 CTD:185404 WormBase:F37A4.5 InParanoid:P41883
OMA:KMLRHAR NextBio:928158 Uniprot:P41883
Length = 319
Score = 99 (39.9 bits), Expect = 0.00013, P = 0.00013
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPIQEEDEEIEADGAN 83
V I L +LK+++H + P V G +LG V + VT+ F P +E+
Sbjct: 29 VNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVDPV 88
Query: 84 YQLEMMRCLREVNVDNNTVGW 104
YQ + M L+ V N VGW
Sbjct: 89 YQTKHMDLLKLVGRTENVVGW 109
>UNIPROTKB|E1BLZ8 [details] [associations]
symbol:EIF3F "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0003743 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 EMBL:DAAA02040761
IPI:IPI00837929 Ensembl:ENSBTAT00000049219 OMA:HHETMYE
Uniprot:E1BLZ8
Length = 384
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 34/106 (32%), Positives = 53/106 (50%)
Query: 2 ANTMARSFLQVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSP--ALVTGQLLG-LDVGS 58
A T A+S L A P RVV++ +++ I+ + + A V G LLG +D S
Sbjct: 97 AQTPAQS-LSGPALPGPFPGGRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHS 155
Query: 59 VLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
V EVTNCF P E ++E+ D + M ++V+ + +GW
Sbjct: 156 V-EVTNCFSVPHNESEDEVAVD-MEFAKNMYELHKKVSPNELILGW 199
>ASPGD|ASPL0000041877 [details] [associations]
symbol:csnE species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0008180
"signalosome" evidence=ISS;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=TAS] [GO:0010388 "cullin deneddylation"
evidence=TAS] [GO:0030448 "hyphal growth" evidence=IMP] [GO:0045116
"protein neddylation" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005737 GO:GO:0046872 EMBL:BN001307
GO:GO:0006508 GO:GO:0008237 EMBL:AACD01000032 GO:GO:0008180
eggNOG:COG1310 HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL
EMBL:AY126455 RefSeq:XP_659733.1 ProteinModelPortal:Q5BBF1
STRING:Q5BBF1 EnsemblFungi:CADANIAT00008806 GeneID:2875469
KEGG:ani:AN2129.2 OrthoDB:EOG4HDX37 Uniprot:Q5BBF1
Length = 335
Score = 99 (39.9 bits), Expect = 0.00014, P = 0.00014
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA-DGAN 83
V+I + +LK++ H + V G + G + + VT+ F P++ + + A D AN
Sbjct: 51 VRISAVALLKMVMHARSGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDEAN 110
Query: 84 -YQLEMMRCLREVNVDNNTVGW 104
Y + ++ RE N VGW
Sbjct: 111 EYMVSYLQSCREAGRMENAVGW 132
>UNIPROTKB|E1C050 [details] [associations]
symbol:EIF3F "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0003743 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ
CTD:8665 EMBL:AC140789 IPI:IPI00578336 RefSeq:XP_421624.1
PRIDE:E1C050 Ensembl:ENSGALT00000008544 GeneID:423748
KEGG:gga:423748 NextBio:20826172 Uniprot:E1C050
Length = 332
Score = 98 (39.6 bits), Expect = 0.00018, P = 0.00018
Identities = 31/95 (32%), Positives = 47/95 (49%)
Query: 13 AAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSP--ALVTGQLLG-LDVGSVLEVTNCFPFP 69
AA P RVV++ +V+ I+ + + A V G LLG +D SV EVTNCF P
Sbjct: 55 AALSGPFPGGRVVRLHPVVLASIVDSFERRNEGAARVIGTLLGTVDKHSV-EVTNCFSVP 113
Query: 70 IQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
E ++E+ D + M ++V+ +GW
Sbjct: 114 HNESEDEVAVD-MEFAKNMYELHKKVSPSEIILGW 147
>ASPGD|ASPL0000076795 [details] [associations]
symbol:AN4492 species:162425 "Emericella nidulans"
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0000266
"mitochondrial fission" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034399 "nuclear
periphery" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0000502
EMBL:BN001303 InterPro:IPR024969 Pfam:PF13012
EnsemblFungi:CADANIAT00005953 OMA:GHAGADQ Uniprot:C8V8E2
Length = 338
Score = 97 (39.2 bits), Expect = 0.00024, P = 0.00024
Identities = 26/81 (32%), Positives = 38/81 (46%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPIQEEDEEIEADGAN 83
V I L +LK+++H + P V G +LG V + VT+ F P +EA
Sbjct: 35 VHISSLALLKMLRHGRAGVPMEVMGLMLGEFVDEYTVRVTDVFAMPQSGTGVSVEAVDPV 94
Query: 84 YQLEMMRCLREVNVDNNTVGW 104
+Q +MM LR+ VGW
Sbjct: 95 FQTKMMDMLRQTGRPEPVVGW 115
>WB|WBGene00001229 [details] [associations]
symbol:eif-3.F species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0010171
GO:GO:0040035 GO:GO:0003743 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ
HAMAP:MF_03005 HOGENOM:HOG000241154 EMBL:Z47808 PIR:T20338
RefSeq:NP_495988.1 ProteinModelPortal:Q18967 SMR:Q18967
DIP:DIP-25689N IntAct:Q18967 MINT:MINT-1039602 STRING:Q18967
PaxDb:Q18967 EnsemblMetazoa:D2013.7.1 EnsemblMetazoa:D2013.7.2
GeneID:174478 KEGG:cel:CELE_D2013.7 UCSC:D2013.7 CTD:174478
WormBase:D2013.7 InParanoid:Q18967 NextBio:884206 Uniprot:Q18967
Length = 294
Score = 96 (38.9 bits), Expect = 0.00024, P = 0.00024
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 49 GQLLGL-DVGSVLEVTNCFPFPIQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
G L+G + GS+ +VTNCF P E ++++E D + +M+ L++ + + VGW
Sbjct: 39 GTLMGYYEKGSI-QVTNCFAIPFNESNDDLEIDD-QFNQQMISALKKTSPNEQPVGW 93
>UNIPROTKB|O00303 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IDA;TAS] [GO:0003743 "translation initiation factor
activity" evidence=IC;IDA;TAS] [GO:0006413 "translational
initiation" evidence=IC;IDA;TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006412 "translation" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 GO:GO:0008234 GO:GO:0006508 GO:GO:0003743
eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012
KO:K03249 HAMAP:MF_03005 Reactome:REACT_1762 HOGENOM:HOG000241154
EMBL:U94855 EMBL:AK095574 EMBL:AK289637 EMBL:AK291354 EMBL:BT006894
EMBL:CR456959 EMBL:BC000490 IPI:IPI00941255 RefSeq:NP_003745.1
UniGene:Hs.516023 ProteinModelPortal:O00303 SMR:O00303
DIP:DIP-35580N IntAct:O00303 MINT:MINT-5000761 STRING:O00303
MEROPS:M67.974 PhosphoSite:O00303 PaxDb:O00303 PRIDE:O00303
DNASU:8665 Ensembl:ENST00000309828 Ensembl:ENST00000533626
GeneID:8665 KEGG:hsa:8665 UCSC:uc001mfw.3 CTD:8665
GeneCards:GC11P007966 HGNC:HGNC:3275 HPA:HPA049250 MIM:603914
neXtProt:NX_O00303 PharmGKB:PA162384806 HOVERGEN:HBG107843
InParanoid:O00303 OrthoDB:EOG44XJHN PhylomeDB:O00303
GenomeRNAi:8665 NextBio:32503 ArrayExpress:O00303 Bgee:O00303
CleanEx:HS_EIF3F Genevestigator:O00303 GermOnline:ENSG00000175390
Uniprot:O00303
Length = 357
Score = 97 (39.2 bits), Expect = 0.00026, P = 0.00026
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 20 PPLRVVQIEGLVMLKIIKHCKEFSP--ALVTGQLLG-LDVGSVLEVTNCFPFPIQEEDEE 76
P RVV++ +++ I+ + + A V G LLG +D SV EVTNCF P E ++E
Sbjct: 87 PGGRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSV-EVTNCFSVPHNESEDE 145
Query: 77 IEADGANYQLEMMRCLREVNVDNNTVGW 104
+ D + M ++V+ + +GW
Sbjct: 146 VAVD-MEFAKNMYELHKKVSPNELILGW 172
>UNIPROTKB|A5A6I3 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9598 "Pan troglodytes" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0008234
GO:GO:0006508 GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 KO:K03249 HAMAP:MF_03005
HOGENOM:HOG000241154 CTD:8665 HOVERGEN:HBG107843 OrthoDB:EOG44XJHN
EMBL:AB222111 RefSeq:NP_001104282.1 UniGene:Ptr.2608
ProteinModelPortal:A5A6I3 STRING:A5A6I3 GeneID:451007
KEGG:ptr:451007 InParanoid:A5A6I3 NextBio:20833681 Uniprot:A5A6I3
Length = 361
Score = 97 (39.2 bits), Expect = 0.00027, P = 0.00027
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 20 PPLRVVQIEGLVMLKIIKHCKEFSP--ALVTGQLLG-LDVGSVLEVTNCFPFPIQEEDEE 76
P RVV++ +++ I+ + + A V G LLG +D SV EVTNCF P E ++E
Sbjct: 91 PGGRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSV-EVTNCFSVPHNESEDE 149
Query: 77 IEADGANYQLEMMRCLREVNVDNNTVGW 104
+ D + M ++V+ + +GW
Sbjct: 150 VAVD-MEFAKNMYELHKKVSPNELILGW 176
>UNIPROTKB|Q4R5B8 [details] [associations]
symbol:EIF3F "Eukaryotic translation initiation factor 3
subunit F" species:9541 "Macaca fascicularis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0008234 GO:GO:0006508 GO:GO:0003743 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 HAMAP:MF_03005 MEROPS:M67.974
HOVERGEN:HBG107843 OrthoDB:EOG44XJHN EMBL:AB169626
ProteinModelPortal:Q4R5B8 Uniprot:Q4R5B8
Length = 361
Score = 97 (39.2 bits), Expect = 0.00027, P = 0.00027
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 20 PPLRVVQIEGLVMLKIIKHCKEFSP--ALVTGQLLG-LDVGSVLEVTNCFPFPIQEEDEE 76
P RVV++ +++ I+ + + A V G LLG +D SV EVTNCF P E ++E
Sbjct: 91 PGGRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSV-EVTNCFSVPHNESEDE 149
Query: 77 IEADGANYQLEMMRCLREVNVDNNTVGW 104
+ D + M ++V+ + +GW
Sbjct: 150 VAVD-MEFAKNMYELHKKVSPNELILGW 176
>MGI|MGI:1913335 [details] [associations]
symbol:Eif3f "eukaryotic translation initiation factor 3,
subunit F" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
"cysteine-type peptidase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1913335 GO:GO:0006413 GO:GO:0008234
GO:GO:0006508 EMBL:CH466531 GO:GO:0003743 eggNOG:COG1310
GO:GO:0005852 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00530000063075 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005
HOGENOM:HOG000241154 MEROPS:M67.974 CTD:8665 HOVERGEN:HBG107843
OrthoDB:EOG44XJHN EMBL:AK002778 EMBL:BC083190 IPI:IPI00120914
RefSeq:NP_079620.2 UniGene:Mm.182962 ProteinModelPortal:Q9DCH4
SMR:Q9DCH4 DIP:DIP-42766N IntAct:Q9DCH4 MINT:MINT-1899046
STRING:Q9DCH4 PhosphoSite:Q9DCH4 PaxDb:Q9DCH4 PRIDE:Q9DCH4
Ensembl:ENSMUST00000033342 GeneID:66085 KEGG:mmu:66085
InParanoid:Q5XJV3 ChiTaRS:EIF3F NextBio:320584 Bgee:Q9DCH4
Genevestigator:Q9DCH4 GermOnline:ENSMUSG00000031029 Uniprot:Q9DCH4
Length = 361
Score = 97 (39.2 bits), Expect = 0.00027, P = 0.00027
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 20 PPLRVVQIEGLVMLKIIKHCKEFSP--ALVTGQLLG-LDVGSVLEVTNCFPFPIQEEDEE 76
P RVV++ +++ I+ + + A V G LLG +D SV EVTNCF P E ++E
Sbjct: 91 PGGRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSV-EVTNCFSVPHNESEDE 149
Query: 77 IEADGANYQLEMMRCLREVNVDNNTVGW 104
+ D + M ++V+ + +GW
Sbjct: 150 VAVD-MEFAKNMYELHKKVSPNELILGW 176
>UNIPROTKB|B3KSH1 [details] [associations]
symbol:EIF3F "HCG1784554, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0003743 "translation initiation factor activity"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
EMBL:CH471064 GO:GO:0003743 InterPro:IPR024969 Pfam:PF13012
OMA:HPVVLFQ HOGENOM:HOG000241154 UniGene:Hs.516023 HGNC:HGNC:3275
HOVERGEN:HBG107843 EMBL:AC044810 EMBL:AC116456 EMBL:AK093511
IPI:IPI00654777 SMR:B3KSH1 IntAct:B3KSH1 STRING:B3KSH1
Ensembl:ENST00000537635 Uniprot:B3KSH1
Length = 372
Score = 97 (39.2 bits), Expect = 0.00028, P = 0.00028
Identities = 28/88 (31%), Positives = 46/88 (52%)
Query: 20 PPLRVVQIEGLVMLKIIKHCKEFSP--ALVTGQLLG-LDVGSVLEVTNCFPFPIQEEDEE 76
P RVV++ +++ I+ + + A V G LLG +D SV EVTNCF P E ++E
Sbjct: 102 PGGRVVRLHPVILASIVDSYERRNEGAARVIGTLLGTVDKHSV-EVTNCFSVPHNESEDE 160
Query: 77 IEADGANYQLEMMRCLREVNVDNNTVGW 104
+ D + M ++V+ + +GW
Sbjct: 161 VAVD-MEFAKNMYELHKKVSPNELILGW 187
>SGD|S000001900 [details] [associations]
symbol:RPN11 "Metalloprotease subunit of the 19S regulatory
particle of the 26S pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016559 "peroxisome fission" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IMP] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=IGI;IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0000266
"mitochondrial fission" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 SGD:S000001900 GO:GO:0005739
GO:GO:0005634 GO:GO:0043161 EMBL:D50617 EMBL:BK006940 GO:GO:0008237
GO:GO:0016559 GO:GO:0008541 eggNOG:COG1310 MEROPS:M67.001
GO:GO:0004843 GO:GO:0016579 GO:GO:0000266 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
OrthoDB:EOG40CMRT EMBL:X79561 EMBL:AY152546 EMBL:AY692755
PIR:S56259 RefSeq:NP_116659.1 ProteinModelPortal:P43588 SMR:P43588
DIP:DIP-1573N IntAct:P43588 MINT:MINT-405184 STRING:P43588
PaxDb:P43588 PeptideAtlas:P43588 PRIDE:P43588 EnsemblFungi:YFR004W
GeneID:850554 KEGG:sce:YFR004W CYGD:YFR004w NextBio:966339
Genevestigator:P43588 GermOnline:YFR004W Uniprot:P43588
Length = 306
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPIQEEDEEIEADGAN 83
V I + +LK++KH + P V G +LG V + V + F P +EA
Sbjct: 27 VYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDV 86
Query: 84 YQLEMMRCLREVNVDNNTVGW 104
+Q +MM L++ D VGW
Sbjct: 87 FQAKMMDMLKQTGRDQMVVGW 107
>GENEDB_PFALCIPARUM|MAL13P1.343 [details] [associations]
symbol:MAL13P1.343 "proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
Identities = 27/90 (30%), Positives = 39/90 (43%)
Query: 16 EEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPIQEED 74
E +A V I L +LKI+KH + P V G +LG V + + + F P
Sbjct: 24 ETLADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNS 83
Query: 75 EEIEADGANYQLEMMRCLREVNVDNNTVGW 104
+EA YQ M+ L++ VGW
Sbjct: 84 VSVEAVDPVYQTNMLEELKKTGRHEMVVGW 113
>UNIPROTKB|Q8ID28 [details] [associations]
symbol:MAL13P1.343 "Proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
Identities = 27/90 (30%), Positives = 39/90 (43%)
Query: 16 EEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPIQEED 74
E +A V I L +LKI+KH + P V G +LG V + + + F P
Sbjct: 24 ETLADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNS 83
Query: 75 EEIEADGANYQLEMMRCLREVNVDNNTVGW 104
+EA YQ M+ L++ VGW
Sbjct: 84 VSVEAVDPVYQTNMLEELKKTGRHEMVVGW 113
>POMBASE|SPBC4C3.07 [details] [associations]
symbol:SPBC4C3.07 "translation initiation factor eIF3f"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0016282 "eukaryotic
43S preinitiation complex" evidence=IDA] [GO:0071540 "eukaryotic
translation initiation factor 3 complex, eIF3e" evidence=IDA]
[GO:0071541 "eukaryotic translation initiation factor 3 complex,
eIF3m" evidence=IDA] [GO:0003743 "translation initiation factor
activity" evidence=IC] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPBC4C3.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003743
eggNOG:COG1310 GO:GO:0004843 GO:GO:0002183 InterPro:IPR024969
Pfam:PF13012 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005 GO:GO:0016282
GO:GO:0071540 GO:GO:0071541 HOGENOM:HOG000241154 OrthoDB:EOG4RZ28G
PIR:T40490 RefSeq:NP_596298.1 ProteinModelPortal:O43060
STRING:O43060 EnsemblFungi:SPBC4C3.07.1 GeneID:2540868
KEGG:spo:SPBC4C3.07 NextBio:20801984 Uniprot:O43060
Length = 302
Score = 94 (38.1 bits), Expect = 0.00042, P = 0.00042
Identities = 28/88 (31%), Positives = 40/88 (45%)
Query: 21 PLRVVQIEGLVMLKIIKHC--KEFSPALVTGQLLGL--DVGSVLEVTNCFPFPIQEEDEE 76
PL +V IE V+ I+ H K + V G LLG + G +E+ +CF P E E+
Sbjct: 20 PLNIV-IEPAVLFSILDHSTRKSENNQRVIGTLLGTRSEDGREIEIKSCFAVPHNESSEQ 78
Query: 77 IEADGANYQLEMMRCLREVNVDNNTVGW 104
+E + Y M + N VGW
Sbjct: 79 VEVE-MEYHRAMYHLHLKANPREVVVGW 105
>DICTYBASE|DDB_G0293254 [details] [associations]
symbol:eif3F "eukaryotic translation initiation
factor 3 (eIF3) subunit 5" species:44689 "Dictyostelium discoideum"
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
dictyBase:DDB_G0293254 GenomeReviews:CM000155_GR EMBL:AAFI02000200
GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852 InterPro:IPR024969
Pfam:PF13012 KO:K03249 OMA:HPVVLFQ HAMAP:MF_03005
RefSeq:XP_629217.1 ProteinModelPortal:Q54C49 STRING:Q54C49
PRIDE:Q54C49 EnsemblProtists:DDB0233924 GeneID:8629099
KEGG:ddi:DDB_G0293254 ProtClustDB:CLSZ2429292 Uniprot:Q54C49
Length = 284
Score = 93 (37.8 bits), Expect = 0.00049, P = 0.00048
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 21 PLRV-VQIEGLVMLKIIKHC--KEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEI 77
P +V V++ +V+ I+ H + V G LLG + VLE+ NCFP + E E+I
Sbjct: 10 PSQVTVKVHPVVIFNILDHYIRRNVGQDRVIGTLLGFNNDGVLEIRNCFPV-VHSETEQI 68
Query: 78 EADGANYQLEMMRCLREVNVDNNTVGW 104
+ YQ +M+ + + +GW
Sbjct: 69 AVE-MEYQRKMLDLHLKSSPREPIIGW 94
>POMBASE|SPAC1687.13c [details] [associations]
symbol:csn5 "COP9/signalosome complex subunit Csn5"
species:4896 "Schizosaccharomyces pombe" [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008180 "signalosome"
evidence=IDA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IGI] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPAC1687.13c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
GO:GO:0008180 eggNOG:COG1310 GO:GO:0004843 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:IFHYDDA MEROPS:M67.002
OrthoDB:EOG4HDX37 PIR:T37756 RefSeq:NP_593131.1
ProteinModelPortal:O94454 STRING:O94454 EnsemblFungi:SPAC1687.13c.1
GeneID:2541529 KEGG:spo:SPAC1687.13c NextBio:20802626
Uniprot:O94454
Length = 299
Score = 93 (37.8 bits), Expect = 0.00053, P = 0.00053
Identities = 20/84 (23%), Positives = 40/84 (47%)
Query: 23 RVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIQEEDEEIEA--D 80
R V+I + +LK+++H + P V G + G G+ L + + F P++ + + A +
Sbjct: 33 RSVKISAVALLKMLRHVSQGMPLEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEE 92
Query: 81 GANYQLEMMRCLREVNVDNNTVGW 104
Y ++ + V N +GW
Sbjct: 93 AQEYSVQYHTLCKSVYRHENVIGW 116
>DICTYBASE|DDB_G0279633 [details] [associations]
symbol:psmD7 "26S proteasome non-ATPase regulatory
subunit 7" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 dictyBase:DDB_G0279633 GenomeReviews:CM000152_GR
GO:GO:0006511 EMBL:AAFI02000032 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 KO:K03038 GO:GO:0005838 OMA:RSIIALH MEROPS:M67.973
RefSeq:XP_641565.1 ProteinModelPortal:Q54WI8 SMR:Q54WI8
STRING:Q54WI8 EnsemblProtists:DDB0232987 GeneID:8622140
KEGG:ddi:DDB_G0279633 ProtClustDB:CLSZ2434496 Uniprot:Q54WI8
Length = 325
Score = 93 (37.8 bits), Expect = 0.00061, P = 0.00061
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 31 VMLKIIKHCKEFSPAL---VTGQLLGLDVGSVLEVTNCFPFPIQEEDEE--IEADGANYQ 85
V+L ++ H + V G LLG + V++V+NC+ P +E++ I N+
Sbjct: 14 VLLSVVDHYNRVAKDTNKRVVGALLGSNNKGVVDVSNCYGLPFEEDEANPNIWFLDHNFH 73
Query: 86 LEMMRCLREVNVDNNTVGW 104
M +++N N VGW
Sbjct: 74 ENMFAMFKKINARENVVGW 92
>DICTYBASE|DDB_G0272566 [details] [associations]
symbol:psmD14 "putative multidrug resistance protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0272566 GO:GO:0045335
GO:GO:0046872 GenomeReviews:CM000151_GR GO:GO:0008237 GO:GO:0004175
EMBL:AAFI02000008 GO:GO:0000502 GO:GO:0006511 eggNOG:COG1310
MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012 KO:K03030
OMA:MVLGQEP EMBL:U96916 RefSeq:XP_644863.1
ProteinModelPortal:Q86IJ1 STRING:Q86IJ1 EnsemblProtists:DDB0191298
GeneID:8618542 KEGG:ddi:DDB_G0272566 ProtClustDB:CLSZ2438686
Uniprot:Q86IJ1
Length = 306
Score = 92 (37.4 bits), Expect = 0.00071, P = 0.00071
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 11 QVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFP 69
++ A + + I L +LK+++H + P V G +LG + + V + F P
Sbjct: 17 KITDATPLPDTAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIRVIDVFAMP 76
Query: 70 IQEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
+EA +Q +M+ L++ D +GW
Sbjct: 77 QSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGW 111
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 104 104 0.00091 102 3 11 22 0.40 30
29 0.50 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 45
No. of states in DFA: 520 (55 KB)
Total size of DFA: 103 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.98u 0.14s 11.12t Elapsed: 00:00:00
Total cpu time: 10.99u 0.14s 11.13t Elapsed: 00:00:00
Start: Fri May 10 14:09:16 2013 End: Fri May 10 14:09:16 2013