BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034089
(104 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224070909|ref|XP_002303292.1| predicted protein [Populus trichocarpa]
gi|222840724|gb|EEE78271.1| predicted protein [Populus trichocarpa]
Length = 146
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 76/97 (78%), Gaps = 4/97 (4%)
Query: 1 MASITACLPSP-LLVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLT 59
MASITA LPSP LLV G++ LS TL LPLSP+ ++QNC+++V +A+GESSESS L
Sbjct: 1 MASITASLPSPPLLVHGKRTLS--STLQTLPLSPIKDRQNCVSVVVRATGESSESSAPLG 58
Query: 60 VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLI 96
+ KSV+N+WD+ SEDRL L+GLGFA +VA+W S LI
Sbjct: 59 IVKSVKNIWDD-SEDRLALVGLGFAALVAIWTSAKLI 94
>gi|21554231|gb|AAM63306.1| unknown [Arabidopsis thaliana]
Length = 156
Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 76/106 (71%), Gaps = 10/106 (9%)
Query: 1 MASITACLPSPLLVQGR-------QKLSLFITLPKLPLSPLNEKQN--CLAIVAKASGES 51
MASI+A LPSPLL+ R QKL +T LSPL+ +N ++++ KASGES
Sbjct: 1 MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60
Query: 52 SESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
S+SST L V ++QNVWD S EDRLGLIGLGFAGIVALWAS+NLIT
Sbjct: 61 SDSSTDLDVVSTIQNVWDKS-EDRLGLIGLGFAGIVALWASLNLIT 105
>gi|18403896|ref|NP_564603.1| uncharacterized protein [Arabidopsis thaliana]
gi|6850346|gb|AAF29409.1|AC022354_8 unknown protein [Arabidopsis thaliana]
gi|15294156|gb|AAK95255.1|AF410269_1 At1g52220/F9I5_10 [Arabidopsis thaliana]
gi|20453285|gb|AAM19881.1| At1g52220/F9I5_10 [Arabidopsis thaliana]
gi|332194648|gb|AEE32769.1| uncharacterized protein [Arabidopsis thaliana]
Length = 156
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 76/106 (71%), Gaps = 10/106 (9%)
Query: 1 MASITACLPSPLLVQGR-------QKLSLFITLPKLPLSPLNEKQN--CLAIVAKASGES 51
MASI+A LPSPLL+ R QKL +T LSPL+ +N ++++ KASGES
Sbjct: 1 MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60
Query: 52 SESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
S+SST L V ++QNVWD S EDRLGLIGLGFAGIVALWAS+NLIT
Sbjct: 61 SDSSTDLDVVSTIQNVWDKS-EDRLGLIGLGFAGIVALWASLNLIT 105
>gi|224054368|ref|XP_002298225.1| predicted protein [Populus trichocarpa]
gi|222845483|gb|EEE83030.1| predicted protein [Populus trichocarpa]
Length = 146
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/98 (66%), Positives = 80/98 (81%), Gaps = 4/98 (4%)
Query: 1 MASITACLPSP-LLVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLT 59
MASI A LPSP LLV G++ F TL KLPLS + E+QNC+A+V KA+GESSESSTSL+
Sbjct: 1 MASIYANLPSPPLLVHGKR--IPFRTLQKLPLSTIKERQNCVAVVVKATGESSESSTSLS 58
Query: 60 VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
+ KSVQN+WD+ SEDRL L+GLGFA +VA+WAS N+IT
Sbjct: 59 IVKSVQNIWDD-SEDRLPLVGLGFAALVAVWASANVIT 95
>gi|118488080|gb|ABK95860.1| unknown [Populus trichocarpa]
Length = 146
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/97 (62%), Positives = 78/97 (80%), Gaps = 2/97 (2%)
Query: 1 MASITACLPSPLLVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLTV 60
MASI A LPSP L+ +++ F TL KLPLS + E+QNC+A+ KA+GESSESSTSL++
Sbjct: 1 MASIYANLPSPPLLVHSKRIP-FRTLQKLPLSTIKERQNCVAVAVKATGESSESSTSLSI 59
Query: 61 FKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
KSVQN+WD+ SEDRL L+GLGFA +VA+WAS N+IT
Sbjct: 60 VKSVQNIWDD-SEDRLPLVGLGFAALVAVWASANVIT 95
>gi|79319729|ref|NP_001031173.1| uncharacterized protein [Arabidopsis thaliana]
gi|332194649|gb|AEE32770.1| uncharacterized protein [Arabidopsis thaliana]
Length = 155
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 75/106 (70%), Gaps = 11/106 (10%)
Query: 1 MASITACLPSPLLVQGR-------QKLSLFITLPKLPLSPLNEKQN--CLAIVAKASGES 51
MASI+A LPSPLL+ R QKL +T LSPL+ +N ++++ KASGES
Sbjct: 1 MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60
Query: 52 SESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
S+SST L V ++QN WD S EDRLGLIGLGFAGIVALWAS+NLIT
Sbjct: 61 SDSSTDLDVVSTIQN-WDKS-EDRLGLIGLGFAGIVALWASLNLIT 104
>gi|388497330|gb|AFK36731.1| unknown [Lotus japonicus]
Length = 178
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/97 (64%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
Query: 1 MASITACLPSPLLVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLTV 60
MASI A L PLL+ GR+ + P P+S L ++N +A+V KASGESSESSTSLTV
Sbjct: 34 MASIAASLQPPLLLHGRKSHT--GNFPSFPVSLLPGRRNLIALVVKASGESSESSTSLTV 91
Query: 61 FKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
+SVQNVWD EDRLGLIG GFAGIVALWAS NLIT
Sbjct: 92 LQSVQNVWDK-PEDRLGLIGFGFAGIVALWASANLIT 127
>gi|297852972|ref|XP_002894367.1| hypothetical protein ARALYDRAFT_892226 [Arabidopsis lyrata subsp.
lyrata]
gi|297340209|gb|EFH70626.1| hypothetical protein ARALYDRAFT_892226 [Arabidopsis lyrata subsp.
lyrata]
Length = 158
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 72/109 (66%), Gaps = 14/109 (12%)
Query: 1 MASITACLPSPLLVQGR-------QKLSLFITLPKLPLSPL--NEK---QNCLAIVAKAS 48
MASI+A LPSPLL+ R QKLS +T + + N + ++ L ++ KAS
Sbjct: 1 MASISATLPSPLLLTQRKSNLTSIQKLSFSLTRGTNDIFSVFSNSRFHLKSSLTLMVKAS 60
Query: 49 GESSESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
ESSESST L V S+QNVWD S EDRLGLIGL FA IVALWAS+NLIT
Sbjct: 61 -ESSESSTDLNVVTSIQNVWDKS-EDRLGLIGLSFAAIVALWASLNLIT 107
>gi|255549936|ref|XP_002516019.1| Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor,
putative [Ricinus communis]
gi|223544924|gb|EEF46439.1| Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor,
putative [Ricinus communis]
Length = 146
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/98 (60%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
Query: 1 MASITACLPSP-LLVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLT 59
MASI A LP+P LLV R +LF T K P+ PL E QN +A+V KA+GESSESS+SL+
Sbjct: 1 MASIVANLPAPALLVPSRT--TLFRTPQKGPVFPLKETQNRVAVVMKAAGESSESSSSLS 58
Query: 60 VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
+ KSV+NVWD SSEDR + GLGFA IV +WAS NL++
Sbjct: 59 IVKSVKNVWD-SSEDRWAIGGLGFAAIVGVWASANLVS 95
>gi|388496712|gb|AFK36422.1| unknown [Medicago truncatula]
Length = 146
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 66/97 (68%), Gaps = 4/97 (4%)
Query: 1 MASITACLPSPLLVQGRQKL-SLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLT 59
MASI A LP PLL+ GR F L P +++ + V KASGESSESSTSLT
Sbjct: 1 MASIIASLPPPLLLHGRNSFPGNFQNFSVSSLPP--GRRSNVPFVVKASGESSESSTSLT 58
Query: 60 VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLI 96
VFKSVQNVWD EDRLGL GLGFA +VALWAS NLI
Sbjct: 59 VFKSVQNVWDK-PEDRLGLFGLGFAAVVALWASTNLI 94
>gi|147766573|emb|CAN76222.1| hypothetical protein VITISV_017230 [Vitis vinifera]
Length = 144
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Query: 3 SITACLPSPLLVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLTVFK 62
S+ A LP PLLV R+ +L L P+S +Q+ L++VAKA+GESSESST+L++ K
Sbjct: 4 SVLASLPPPLLVHRRE--ALVRALNGFPVSINRGRQSSLSVVAKATGESSESSTTLSIVK 61
Query: 63 SVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
SVQNVW + EDR L GLGFA IVA+WAS NLIT
Sbjct: 62 SVQNVWGD-PEDRFALFGLGFAAIVAVWASANLIT 95
>gi|225442615|ref|XP_002284539.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
chloroplastic isoform 2 [Vitis vinifera]
gi|225442617|ref|XP_002284537.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
chloroplastic isoform 1 [Vitis vinifera]
gi|297743263|emb|CBI36130.3| unnamed protein product [Vitis vinifera]
Length = 146
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Query: 3 SITACLPSPLLVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLTVFK 62
S+ A LP PLLV R+ +L L P+S +Q+ L++VAKA+GESSESST+L++ K
Sbjct: 4 SVLASLPPPLLVHRRE--ALVRALNGFPVSINRGRQSSLSVVAKATGESSESSTTLSIVK 61
Query: 63 SVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
SVQNVW + EDR L GLGFA IVA+WAS NLIT
Sbjct: 62 SVQNVWGD-PEDRFALFGLGFAAIVAVWASANLIT 95
>gi|351723547|ref|NP_001235747.1| uncharacterized protein LOC100306487 [Glycine max]
gi|255628693|gb|ACU14691.1| unknown [Glycine max]
Length = 145
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Query: 25 TLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFA 84
P P S L+ ++N ++ V KASGESSESST+LTVFKSVQNVWD EDRLGLIGLGFA
Sbjct: 23 NFPSSPFSLLSGRRNHVSFVVKASGESSESSTTLTVFKSVQNVWDQ-PEDRLGLIGLGFA 81
Query: 85 GIVALWASVNLI 96
I A WAS NLI
Sbjct: 82 AIAAFWASTNLI 93
>gi|351723607|ref|NP_001236517.1| uncharacterized protein LOC100305776 [Glycine max]
gi|255626581|gb|ACU13635.1| unknown [Glycine max]
Length = 145
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/96 (60%), Positives = 69/96 (71%), Gaps = 3/96 (3%)
Query: 1 MASITACLPSPLLVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLTV 60
MAS+ A LP PLL+ R+ S P P+S L+ + N ++ V KASGESSESST+LTV
Sbjct: 1 MASVVASLPPPLLLPARK--SHMGNFPSSPVSLLSGRWNRVSFVVKASGESSESSTTLTV 58
Query: 61 FKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLI 96
FKSVQN+WD EDRLGLIGLGFA + A WAS NLI
Sbjct: 59 FKSVQNIWDQ-PEDRLGLIGLGFAAVAAFWASTNLI 93
>gi|449448018|ref|XP_004141763.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
chloroplastic-like isoform 2 [Cucumis sativus]
gi|449526878|ref|XP_004170440.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
chloroplastic-like [Cucumis sativus]
Length = 145
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/105 (46%), Positives = 59/105 (56%), Gaps = 19/105 (18%)
Query: 1 MASITACLPSPLLVQGR--------QKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESS 52
MASI A LP PLL + QKLS+F S N + +V KA G SS
Sbjct: 1 MASIVATLPPPLLAPRKSFTILNISQKLSVF--------STANGRSGN--VVVKAVGGSS 50
Query: 53 ESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
ESSTSL + KSV+NVWD EDRL L GLGFA + W + N++T
Sbjct: 51 ESSTSLDIVKSVRNVWDQ-PEDRLALFGLGFAAVATAWTATNVVT 94
>gi|145324913|ref|NP_001077703.1| uncharacterized protein [Arabidopsis thaliana]
gi|332194650|gb|AEE32771.1| uncharacterized protein [Arabidopsis thaliana]
Length = 127
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 13/101 (12%)
Query: 1 MASITACLPSPLLVQGR-------QKLSLFITLPKLPLSPLNEKQN--CLAIVAKASGES 51
MASI+A LPSPLL+ R QKL +T LSPL+ +N ++++ KASGES
Sbjct: 1 MASISATLPSPLLLTQRKSNLTSIQKLPFSLTRGTNDLSPLSLTRNPSSISLMVKASGES 60
Query: 52 SESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWAS 92
S+SST L V ++QNV + D+L +I GF + L+++
Sbjct: 61 SDSSTDLDVVSTIQNV----AIDKLPVISSGFELVGILFST 97
>gi|297597647|ref|NP_001044320.2| Os01g0761000 [Oryza sativa Japonica Group]
gi|14587304|dbj|BAB61215.1| P0460E08.25 [Oryza sativa Japonica Group]
gi|20804672|dbj|BAB92360.1| unknown protein [Oryza sativa Japonica Group]
gi|222619281|gb|EEE55413.1| hypothetical protein OsJ_03533 [Oryza sativa Japonica Group]
gi|255673703|dbj|BAF06234.2| Os01g0761000 [Oryza sativa Japonica Group]
Length = 151
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 1 MASITA-CLPSPLLVQGRQKLSLFITLPKLPLSP----LNEKQNCLAIVAKASGESSESS 55
MAS A P+ L+ +G + S+ LP LP P ++ + +VA + + S
Sbjct: 1 MASALAVARPAALVPRGGSE-SITGNLPMLPAVPSTRFVSGRMRSRNVVAAKAAQDSSEP 59
Query: 56 TSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLITV 98
+S +V K VQ+ + +S ED L G+GFAGI ALWAS+NL+ V
Sbjct: 60 SSGSVVKYVQSSF-SSPEDLFALAGIGFAGIAALWASINLVEV 101
>gi|218189096|gb|EEC71523.1| hypothetical protein OsI_03824 [Oryza sativa Indica Group]
Length = 151
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 7/103 (6%)
Query: 1 MASITA-CLPSPLLVQGRQKLSLFITLPKLPLSP----LNEKQNCLAIVAKASGESSESS 55
MAS A P+ L+ +G + S+ LP LP P ++ + +VA + + S
Sbjct: 1 MASALAVARPAALVPRGGSE-SITGNLPMLPAVPSTRFVSGRMRSRNVVAAKAAQDSSEP 59
Query: 56 TSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLITV 98
+S +V K VQ+ + ++ ED L G+GFAGI ALWAS+NL+ V
Sbjct: 60 SSGSVVKYVQSSF-STPEDLFALAGIGFAGIAALWASINLVEV 101
>gi|413952363|gb|AFW85012.1| hypothetical protein ZEAMMB73_113048 [Zea mays]
Length = 152
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 42 AIVAKASGESSESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLITV 98
A+VAKA+ + SESS + ++ K V + + +++ED L G+GFA + ALWASVNLI +
Sbjct: 47 AVVAKAAQDGSESSGTGSIVKYVTSSF-STAEDIFALAGIGFAAVAALWASVNLIEI 102
>gi|116783046|gb|ABK22774.1| unknown [Picea sitchensis]
Length = 170
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 43 IVAKASGESSESSTS--LTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLI 96
++A A+GE+S K VQ W+ + +D+L + GLGFA ++ LWAS LI
Sbjct: 64 VIAMATGETSTDPVKPLTDALKPVQEAWEKT-DDKLAVGGLGFAAVIVLWASTGLI 118
>gi|168019666|ref|XP_001762365.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686443|gb|EDQ72832.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 182
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 11/72 (15%)
Query: 35 NEKQNCLAIVAKASGESSESSTSLTV----------FKSVQNVWDNSSEDRLGLIGLGFA 84
E + L IVA + + E++ TV KSVQ W+ + +D++ + GLG A
Sbjct: 60 TEPKKYLTIVAAKATKDPETTVESTVDDTSAAFEDALKSVQEAWEKT-DDKVAIAGLGLA 118
Query: 85 GIVALWASVNLI 96
G+VA+W++ LI
Sbjct: 119 GLVAIWSAAGLI 130
>gi|168004237|ref|XP_001754818.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693922|gb|EDQ80272.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 182
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 11/69 (15%)
Query: 38 QNCLAIVAKASGESSESSTSLTV----------FKSVQNVWDNSSEDRLGLIGLGFAGIV 87
+ L IVA + + E++ + TV KSVQ W+ + +D++ + GLG AG+V
Sbjct: 63 KRSLTIVAAKATKEPETTVNSTVNDSSAAIEDALKSVQEAWEKT-DDKVAIAGLGLAGLV 121
Query: 88 ALWASVNLI 96
A+WA+ LI
Sbjct: 122 AIWAAAGLI 130
>gi|357512649|ref|XP_003626613.1| Thylakoid membrane phosphoprotein 14 kDa [Medicago truncatula]
gi|355501628|gb|AES82831.1| Thylakoid membrane phosphoprotein 14 kDa [Medicago truncatula]
Length = 158
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 32 SPLNEKQNCLAIVAKASGESSESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWA 91
S E + A AS + S + S + K++Q WD ED+ + L AG VALW
Sbjct: 63 STTTETEADAATTEVASTDPSTVTDSPELVKTIQQTWDKV-EDKYAVSALAVAGTVALWG 121
Query: 92 SVNLITVS 99
S +I+VS
Sbjct: 122 SAGVISVS 129
>gi|116780896|gb|ABK21868.1| unknown [Picea sitchensis]
Length = 104
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 47 ASGESSESSTS--LTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLI 96
A+GE+S K VQ W+ + +D+L + GLGFA ++ LWAS LI
Sbjct: 2 ATGETSTDPVKPLTDALKPVQEAWEKT-DDKLAVGGLGFAAVIVLWASTGLI 52
>gi|356559599|ref|XP_003548086.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
chloroplastic-like [Glycine max]
Length = 168
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 32 SPLNEKQNC------------LAIVAKASGESSESSTSLTV---FKSVQNVWDNSSEDRL 76
SPL QNC ++A A+GE+ + V K++Q WD +D+
Sbjct: 37 SPLLHSQNCSWKTTAYCRSIARNVMAMATGEAPAEAAPTEVPEIVKTLQETWDKV-DDKY 95
Query: 77 GLIGLGFAGIVALWASVNLIT 97
+ L G+VALW SV LI+
Sbjct: 96 AVSSLALVGVVALWGSVGLIS 116
>gi|168030972|ref|XP_001767996.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680838|gb|EDQ67271.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 54 SSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLI 96
S+ + +S+ W+ S +D+ ++GLGFAG++ LWA+ LI
Sbjct: 84 SAAAEDFLQSLTEAWEKS-DDKPAIVGLGFAGLIGLWATNGLI 125
>gi|357512647|ref|XP_003626612.1| Thylakoid membrane phosphoprotein 14 kDa [Medicago truncatula]
gi|87240857|gb|ABD32715.1| thylakoid membrane phosphoprotein 14 kda, chloroplast precursor,
putative [Medicago truncatula]
gi|217075606|gb|ACJ86163.1| unknown [Medicago truncatula]
gi|355501627|gb|AES82830.1| Thylakoid membrane phosphoprotein 14 kDa [Medicago truncatula]
gi|388499700|gb|AFK37916.1| unknown [Medicago truncatula]
Length = 180
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 32 SPLNEKQNCLAIVAKASGESSESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWA 91
S E + A AS + S + S + K++Q WD ED+ + L AG VALW
Sbjct: 63 STTTETEADAATTEVASTDPSTVTDSPELVKTIQQTWDKV-EDKYAVSALAVAGTVALWG 121
Query: 92 SVNLIT 97
S +I+
Sbjct: 122 SAGVIS 127
>gi|388500366|gb|AFK38249.1| unknown [Lotus japonicus]
Length = 159
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 38 QNCLAIVAKASGESSESSTS------LTVF-KSVQNVWDNSSEDRLGLIGLGFAGIVALW 90
+N +A+ + ++E+ T+ L F K++Q WD ED+ + LG AG VALW
Sbjct: 62 RNVMAMATTSEAPTTETVTTELNGGELPEFVKTIQEAWDKV-EDKYAVSSLGVAGFVALW 120
Query: 91 ASVNLIT 97
S +I+
Sbjct: 121 GSAGVIS 127
>gi|297824769|ref|XP_002880267.1| hypothetical protein ARALYDRAFT_483848 [Arabidopsis lyrata subsp.
lyrata]
gi|297326106|gb|EFH56526.1| hypothetical protein ARALYDRAFT_483848 [Arabidopsis lyrata subsp.
lyrata]
Length = 177
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 60 VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
+ K+ Q W+ ED+ + L FAG+VALW S +I+
Sbjct: 89 IVKTAQEAWEKV-EDKYAIGSLAFAGVVALWGSAGMIS 125
>gi|167626442|ref|YP_001676942.1| ROK family protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167596443|gb|ABZ86441.1| ROK family protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 321
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 34 LNEKQNCLAIVAKASGESSESSTSL-TVFKSVQNVWDNSSEDRLGLIGLGFAGIV 87
+E +N L S S+S T L +FK + + D+S+ D++ IG+G AG V
Sbjct: 17 FDEHKNLLKTAKVKSKGKSDSDTILGQIFKVINKLLDDSTRDKIKAIGIGIAGFV 71
>gi|357122889|ref|XP_003563146.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
chloroplastic-like [Brachypodium distachyon]
Length = 148
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 14/97 (14%)
Query: 5 TAC-LPSPL----LVQGRQKLSLFITLPKLPLSPLNEKQNCLAIVAKASGESSESSTSLT 59
TAC L +PL L +GR ++F K+ + +A+V A+G S ++ T
Sbjct: 3 TACRLAAPLGLAPLPRGRPAAAVFRCSGKV------GPRISVAVVRAANGTSGGEGSAET 56
Query: 60 --VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVN 94
+ K+VQ+ W ED+ + +GFA +V LW +V
Sbjct: 57 PEIVKAVQDAWAKV-EDKYAVATIGFASLVGLWTAVG 92
>gi|254877406|ref|ZP_05250116.1| ROK family protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254843427|gb|EET21841.1| ROK family protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 321
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 34 LNEKQNCLAIVAKASGESSESSTSL-TVFKSVQNVWDNSSEDRLGLIGLGFAGIV 87
+E +N L S S+S T L +FK + + D+S+ D++ IG+G AG V
Sbjct: 17 FDEHKNLLKTAKVKSKGKSDSDTILGQIFKVINKLLDDSTRDKIKAIGIGIAGFV 71
>gi|337755737|ref|YP_004648248.1| ROK-family transcriptional regulator [Francisella sp. TX077308]
gi|336447342|gb|AEI36648.1| Putative ROK-family transcriptional regulator [Francisella sp.
TX077308]
Length = 321
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 34 LNEKQNCLAIVAKASGESSESSTSL-TVFKSVQNVWDNSSEDRLGLIGLGFAGIV 87
+E +N L S S+S T L +FK + + D+S+ D++ IG+G AG V
Sbjct: 17 FDEHKNLLKTAKVKSKGKSDSDTILGQIFKVINKLIDDSTRDKIKAIGIGIAGFV 71
>gi|225453634|ref|XP_002266107.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa, chloroplastic
[Vitis vinifera]
gi|296089017|emb|CBI38720.3| unnamed protein product [Vitis vinifera]
Length = 171
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 43 IVAKASGES-SESSTSLT--VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
++A A+GE+ +E T+ + K+VQ WD ED+ + L AG V LW S +++
Sbjct: 63 VIAMATGEAPAEVGTTEVPEIIKTVQEAWDKV-EDKYAVSSLAAAGFVGLWVSTGMVS 119
>gi|147785076|emb|CAN75451.1| hypothetical protein VITISV_028013 [Vitis vinifera]
Length = 171
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 43 IVAKASGES-SESSTSLT--VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
++A A+GE+ +E T+ + K+VQ WD ED+ + L AG V LW S +++
Sbjct: 63 VIAMATGEAPAEVGTTEVPEIIKTVQEAWDKV-EDKYAVSSLAAAGFVGLWVSTGMVS 119
>gi|449445535|ref|XP_004140528.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
chloroplastic-like [Cucumis sativus]
gi|449518976|ref|XP_004166511.1| PREDICTED: thylakoid membrane phosphoprotein 14 kDa,
chloroplastic-like [Cucumis sativus]
Length = 175
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 47 ASGESSESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
A+GE +E + K VQ WD ED+ + L +G VALWAS +++
Sbjct: 77 AAGELAEMPE---IVKKVQEAWDKV-EDKYAVSSLAVSGFVALWASAGVVS 123
>gi|242054487|ref|XP_002456389.1| hypothetical protein SORBIDRAFT_03g035235 [Sorghum bicolor]
gi|241928364|gb|EES01509.1| hypothetical protein SORBIDRAFT_03g035235 [Sorghum bicolor]
Length = 150
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 3/57 (5%)
Query: 42 AIVAKASGESSESSTSLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLITV 98
++VAKA+ +SSESS S+ K V + + +++ED GL G+GFA I ALWASVNLI +
Sbjct: 47 SVVAKAAQDSSESSGSIV--KYVTSSF-STAEDIFGLAGIGFAAIAALWASVNLIEI 100
>gi|18407178|ref|NP_566086.1| thylakoid membrane phosphoprotein [Arabidopsis thaliana]
gi|79324933|ref|NP_001031551.1| thylakoid membrane phosphoprotein [Arabidopsis thaliana]
gi|38503349|sp|Q8LCA1.2|TMP14_ARATH RecName: Full=Thylakoid membrane phosphoprotein 14 kDa,
chloroplastic; Flags: Precursor
gi|3510256|gb|AAC33500.1| expressed protein [Arabidopsis thaliana]
gi|17473794|gb|AAL38332.1| unknown protein [Arabidopsis thaliana]
gi|21386997|gb|AAM47902.1| unknown protein [Arabidopsis thaliana]
gi|330255664|gb|AEC10758.1| thylakoid membrane phosphoprotein [Arabidopsis thaliana]
gi|330255665|gb|AEC10759.1| thylakoid membrane phosphoprotein [Arabidopsis thaliana]
Length = 174
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 60 VFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNLIT 97
+ K+ Q W+ +D+ + L FAG+VALW S +I+
Sbjct: 86 IVKTAQEAWEKV-DDKYAIGSLAFAGVVALWGSAGMIS 122
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.129 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,431,201,446
Number of Sequences: 23463169
Number of extensions: 44869810
Number of successful extensions: 163580
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 163527
Number of HSP's gapped (non-prelim): 46
length of query: 104
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 31
effective length of database: 6,351,416,734
effective search space: 196893918754
effective search space used: 196893918754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)