Query 034089
Match_columns 104
No_of_seqs 78 out of 80
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 16:22:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034089.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034089hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xkta_ c.69.1.22 (A:) Fatty a 41.9 4.3 0.00032 24.9 1.1 41 55-95 64-105 (286)
2 d1pjaa_ c.69.1.13 (A:) Palmito 30.1 8.5 0.00062 23.3 1.1 37 57-94 53-89 (268)
3 d1azwa_ c.69.1.7 (A:) Proline 17.3 31 0.0023 22.3 2.0 39 57-95 85-123 (313)
4 d1dqza_ c.69.1.3 (A:) Antigen 14.3 26 0.0019 23.3 0.9 36 57-93 98-133 (280)
5 d1nvpb_ a.32.1.1 (B:) Large ch 12.8 45 0.0033 18.2 1.5 14 57-70 27-40 (43)
6 d1nh2b_ a.32.1.1 (B:) Large ch 12.7 45 0.0033 18.4 1.5 14 57-70 29-42 (46)
7 d1orja_ a.24.19.1 (A:) Flagell 12.4 35 0.0026 21.2 1.1 18 58-76 106-123 (126)
8 d1sfra_ c.69.1.3 (A:) Antigen 12.1 33 0.0024 22.5 0.9 35 58-93 104-138 (288)
9 d2zgya2 c.55.1.1 (A:158-320) P 11.4 14 0.001 22.5 -1.1 27 59-86 101-127 (163)
10 d1q90r_ f.23.12.1 (R:) ISP sub 11.2 1.1E+02 0.0079 16.3 2.8 20 78-97 15-34 (39)
No 1
>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.92 E-value=4.3 Score=24.94 Aligned_cols=41 Identities=12% Similarity=0.127 Sum_probs=30.6
Q ss_pred cchhhhHHHHHHHhhhcc-cchhHHHHHHHHHHHHHHHhhhh
Q 034089 55 STSLTVFKSVQNVWDNSS-EDRLGLIGLGFAGIVALWASVNL 95 (104)
Q Consensus 55 ~~~~eivk~lq~~Wd~~~-EdK~av~~~g~aaivalW~s~~v 95 (104)
.+-+++..+.-+...+.. +++|.++|...||++|++.+.-.
T Consensus 64 ~~~~~~a~~~~~~~~~~~~~~~~~lvGhS~Gg~vA~~~A~~~ 105 (286)
T d1xkta_ 64 DSIHSLAAYYIDCIRQVQPEGPYRVAGYSYGACVAFEMCSQL 105 (286)
T ss_dssp SCHHHHHHHHHHHHHHHCCSSCCEEEEETHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhcCCCceEEeecCCccHHHHHHHHHH
Confidence 335577777666666622 57899999999999999987654
No 2
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.14 E-value=8.5 Score=23.33 Aligned_cols=37 Identities=14% Similarity=0.050 Sum_probs=31.0
Q ss_pred hhhhHHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhh
Q 034089 57 SLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVN 94 (104)
Q Consensus 57 ~~eivk~lq~~Wd~~~EdK~av~~~g~aaivalW~s~~ 94 (104)
-+++.+++.+--++ ..+|+-++|.-.||.+|+..+.-
T Consensus 53 ~~~~~~~l~~~l~~-l~~~~~lvGhS~GG~ia~~~a~~ 89 (268)
T d1pjaa_ 53 VQGFREAVVPIMAK-APQGVHLICYSQGGLVCRALLSV 89 (268)
T ss_dssp HHHHHHHHHHHHHH-CTTCEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-cCCeEEEEccccHHHHHHHHHHH
Confidence 44778888887788 67999999999999999987753
No 3
>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas campestris, pv. citri [TaxId: 339]}
Probab=17.35 E-value=31 Score=22.33 Aligned_cols=39 Identities=13% Similarity=0.201 Sum_probs=32.3
Q ss_pred hhhhHHHHHHHhhhcccchhHHHHHHHHHHHHHHHhhhh
Q 034089 57 SLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASVNL 95 (104)
Q Consensus 57 ~~eivk~lq~~Wd~~~EdK~av~~~g~aaivalW~s~~v 95 (104)
..++..++.+--|..-.+|..++|...||.++++.+.--
T Consensus 85 ~~~~~~dl~~~~~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 123 (313)
T d1azwa_ 85 TWDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTH 123 (313)
T ss_dssp HHHHHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhccccceeEEecCCcHHHHHHHHHh
Confidence 457888888888885578899999999999999987643
No 4
>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=14.26 E-value=26 Score=23.28 Aligned_cols=36 Identities=19% Similarity=0.087 Sum_probs=29.9
Q ss_pred hhhhHHHHHHHhhhcccchhHHHHHHHHHHHHHHHhh
Q 034089 57 SLTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASV 93 (104)
Q Consensus 57 ~~eivk~lq~~Wd~~~EdK~av~~~g~aaivalW~s~ 93 (104)
.+|++..|+++... -.++-++.|+..||..++.++.
T Consensus 98 ~~el~~~i~~~~~~-d~~r~~i~G~SmGG~~Al~lA~ 133 (280)
T d1dqza_ 98 TREMPAWLQANKGV-SPTGNAAVGLSMSGGSALILAA 133 (280)
T ss_dssp HTHHHHHHHHHHCC-CSSSCEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CCCceEEEEechHHHHHHHHHH
Confidence 35888999998876 5677889999999999998764
No 5
>d1nvpb_ a.32.1.1 (B:) Large chain TOA1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.84 E-value=45 Score=18.19 Aligned_cols=14 Identities=21% Similarity=0.672 Sum_probs=12.0
Q ss_pred hhhhHHHHHHHhhh
Q 034089 57 SLTVFKSVQNVWDN 70 (104)
Q Consensus 57 ~~eivk~lq~~Wd~ 70 (104)
++.++++||+.|+.
T Consensus 27 De~vL~eLk~~We~ 40 (43)
T d1nvpb_ 27 DEQVLMELKTLWEN 40 (43)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 46899999999975
No 6
>d1nh2b_ a.32.1.1 (B:) Large chain TOA1, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=12.69 E-value=45 Score=18.37 Aligned_cols=14 Identities=14% Similarity=0.662 Sum_probs=12.3
Q ss_pred hhhhHHHHHHHhhh
Q 034089 57 SLTVFKSVQNVWDN 70 (104)
Q Consensus 57 ~~eivk~lq~~Wd~ 70 (104)
++.++++||..|+.
T Consensus 29 de~vL~eLk~~We~ 42 (46)
T d1nh2b_ 29 DEQTLQDLKNIWQK 42 (46)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH
Confidence 56899999999986
No 7
>d1orja_ a.24.19.1 (A:) Flagellar export chaperone FliS {Aquifex aeolicus [TaxId: 63363]}
Probab=12.43 E-value=35 Score=21.24 Aligned_cols=18 Identities=17% Similarity=0.741 Sum_probs=14.7
Q ss_pred hhhHHHHHHHhhhcccchh
Q 034089 58 LTVFKSVQNVWDNSSEDRL 76 (104)
Q Consensus 58 ~eivk~lq~~Wd~~~EdK~ 76 (104)
.++++++++.|+. +..|.
T Consensus 106 ~~il~~l~eaW~~-i~~~~ 123 (126)
T d1orja_ 106 LEILKDLREAWEE-VKKKV 123 (126)
T ss_dssp HHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHH-HHHHh
Confidence 4899999999999 66554
No 8
>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=12.06 E-value=33 Score=22.51 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=29.3
Q ss_pred hhhHHHHHHHhhhcccchhHHHHHHHHHHHHHHHhh
Q 034089 58 LTVFKSVQNVWDNSSEDRLGLIGLGFAGIVALWASV 93 (104)
Q Consensus 58 ~eivk~lq~~Wd~~~EdK~av~~~g~aaivalW~s~ 93 (104)
.|++..|++...- -.++-++.|.-.||..|+.++.
T Consensus 104 ~el~~~i~~~~~~-d~~r~~i~G~S~GG~~A~~~a~ 138 (288)
T d1sfra_ 104 SELPGWLQANRHV-KPTGSAVVGLSMAASSALTLAI 138 (288)
T ss_dssp THHHHHHHHHHCB-CSSSEEEEEETHHHHHHHHHHH
T ss_pred HHhHHHHHHhcCC-CCCceEEEEEccHHHHHHHHHH
Confidence 4888888888876 5678899999999999988764
No 9
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM {Escherichia coli [TaxId: 562]}
Probab=11.41 E-value=14 Score=22.50 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=20.7
Q ss_pred hhHHHHHHHhhhcccchhHHHHHHHHHH
Q 034089 59 TVFKSVQNVWDNSSEDRLGLIGLGFAGI 86 (104)
Q Consensus 59 eivk~lq~~Wd~~~EdK~av~~~g~aai 86 (104)
++.+.+++.|.+ .++--.++..|+|+-
T Consensus 101 ~i~~~i~~~~~~-~~~~~~iil~GGGs~ 127 (163)
T d2zgya2 101 KLEQRVLNTLNE-FSGYTHVMVIGGGAE 127 (163)
T ss_dssp HHHHHHHHHHTT-CCCCCEEEEESTTHH
T ss_pred HHHHHHHHhhcc-ccccceEEEECchHH
Confidence 667777888888 777777888877764
No 10
>d1q90r_ f.23.12.1 (R:) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=11.23 E-value=1.1e+02 Score=16.33 Aligned_cols=20 Identities=25% Similarity=0.109 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHhhhhhh
Q 034089 78 LIGLGFAGIVALWASVNLIT 97 (104)
Q Consensus 78 v~~~g~aaivalW~s~~vv~ 97 (104)
++.+|.+++.++|.....+.
T Consensus 15 Lll~G~~~~~~~g~l~py~~ 34 (39)
T d1q90r_ 15 LILAGGAGLPITTLALGYGA 34 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccchhhhhhccceeE
Confidence 67789999999998876653
Done!