BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034099
         (104 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q941C5|CLE44_ARATH CLAVATA3/ESR (CLE)-related protein 44 OS=Arabidopsis thaliana
           GN=CLE44 PE=1 SV=1
          Length = 112

 Score = 40.8 bits (94), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 17/116 (14%)

Query: 1   MAATKSETYTKS--YSLLLFALVCFIFLLFQF------STTDPIKASPSKPDSSVTTTST 52
           MA T  +T  KS  +  ++  ++  IFL F F      S    +  S SK   +    S 
Sbjct: 1   MATTIDQTSIKSLHFHQVIRLIITIIFLAFLFLIGPTSSMNHHLHESSSK---NTMAPSK 57

Query: 53  RFLLNSPSSTSTSTSTVN-LHNPKRT----PNTPSNGQQLGADEHEVPSGPNPISN 103
           RFLL  PS+ S+ST  +    +P+R+     +     ++  A+ HEVPSGPNPISN
Sbjct: 58  RFLLQ-PSTPSSSTMKMRPTAHPRRSGTSSSSARKRRREFRAEAHEVPSGPNPISN 112


>sp|Q6IWB2|CLE42_ARATH CLAVATA3/ESR (CLE)-related protein 42 OS=Arabidopsis thaliana
           GN=CLE42 PE=2 SV=1
          Length = 88

 Score = 40.4 bits (93), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 16/21 (76%), Positives = 19/21 (90%)

Query: 84  GQQLGADEHEVPSGPNPISNR 104
           G+ +GA+EH VPSGPNPISNR
Sbjct: 68  GKMIGANEHGVPSGPNPISNR 88


>sp|Q8ST66|ABCGI_DICDI ABC transporter G family member 18 OS=Dictyostelium discoideum
           GN=abcG18 PE=3 SV=1
          Length = 1476

 Score = 39.7 bits (91), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 8/90 (8%)

Query: 12  SYSLL--LFALVCFIFLLFQFSTTDPIKASPSKPDSSVTTTSTRFLLNSPSSTSTSTST- 68
           +++LL  L  LVC  FL+F+    DP+    SKP+   TTT  +   NS  ST+T+ S  
Sbjct: 706 AFTLLFWLITLVCMKFLVFRVYRKDPVGIKKSKPNK--TTTLIKMNRNSTDSTTTNNSMN 763

Query: 69  --VNLHNPKRTPNTPSNGQQLGADEHEVPS 96
              N HN K+  ++ S G+++ + + +V S
Sbjct: 764 YFNNKHNKKQNDDSDS-GEEMESVDVDVKS 792


>sp|A1EC31|TDIF_ZINEL CLAVATA3/ESR (CLE)-related protein TDIF OS=Zinnia elegans GN=TDIF
           PE=1 SV=1
          Length = 132

 Score = 37.7 bits (86), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/37 (56%), Positives = 24/37 (64%), Gaps = 3/37 (8%)

Query: 70  NLHNPKRTPNT--PSNGQQLGADEHEVPSGPNPISNR 104
           +LH PKRT +   P   +   A  HEVPSGPNPISNR
Sbjct: 97  DLH-PKRTHHQSHPKPTRSFEAGAHEVPSGPNPISNR 132


>sp|Q84W98|CLE41_ARATH CLAVATA3/ESR (CLE)-related protein 41 OS=Arabidopsis thaliana
           GN=CLE41 PE=1 SV=1
          Length = 99

 Score = 35.8 bits (81), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 14/18 (77%), Positives = 15/18 (83%)

Query: 86  QLGADEHEVPSGPNPISN 103
           + G D HEVPSGPNPISN
Sbjct: 82  EFGNDAHEVPSGPNPISN 99


>sp|Q9FZE4|CLE9_ARATH CLAVATA3/ESR (CLE)-related protein 9 OS=Arabidopsis thaliana
           GN=CLE9 PE=2 SV=2
          Length = 120

 Score = 28.9 bits (63), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 73  NPKRTPNTPSNGQQLGADEHEVPSGPNPISN 103
            P  +P  P    + G D+  VPSGPNP+ N
Sbjct: 90  QPLLSPPPPEIDPRYGVDKRLVPSGPNPLHN 120


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.309    0.122    0.344 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,753,873
Number of Sequences: 539616
Number of extensions: 1320863
Number of successful extensions: 9744
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 7305
Number of HSP's gapped (non-prelim): 2378
length of query: 104
length of database: 191,569,459
effective HSP length: 73
effective length of query: 31
effective length of database: 152,177,491
effective search space: 4717502221
effective search space used: 4717502221
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)