BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034107
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNC9|TOM92_ARATH Mitochondrial import receptor subunit TOM9-2 OS=Arabidopsis
thaliana GN=TOM9-2 PE=1 SV=3
Length = 99
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Query: 26 RVSDTPIVAYTKQKASDAAYVSHKLLKSTGKAAWIAGTTFLILVVPLIIEMDREQQFNEL 85
R+S++ IV+ ++ A DA VS KLL+STGKAAWIAGTTFLILVVPLIIEMDRE Q NE+
Sbjct: 21 RISNSEIVSQGRRAAGDAVEVSKKLLRSTGKAAWIAGTTFLILVVPLIIEMDREAQINEI 80
Query: 86 EMQQQSLLGAPPLAPAQK 103
E+QQ SLLGAPP +P Q+
Sbjct: 81 ELQQASLLGAPP-SPMQR 97
>sp|O64497|TOM91_ARATH Mitochondrial import receptor subunit TOM9-1 OS=Arabidopsis
thaliana GN=TOM9-1 PE=2 SV=1
Length = 94
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Query: 8 KRLTNNSGEVGFLAKVTRRVSDTPIVAYTKQKASDAAYVSHKLLKSTGKAAWIAGTTFLI 67
K++ G+ LAK+ S+ IV+ ++ A DA YVS KLLKSTGKAAWIAGTTFLI
Sbjct: 4 KKIGAGKGDSSILAKI----SNYDIVSQGRRAACDAVYVSKKLLKSTGKAAWIAGTTFLI 59
Query: 68 LVVPLIIEMDREQQFNELEMQQQSLLGAPPL 98
L VPLI+E++++ + E++ +Q SLLG PP+
Sbjct: 60 LAVPLILELEQDHRLGEIDFEQASLLGTPPV 90
>sp|Q4R3C7|TOM22_MACFA Mitochondrial import receptor subunit TOM22 homolog OS=Macaca
fascicularis GN=TOMM22 PE=2 SV=3
Length = 142
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 45 YVSHKLLKSTGKAAWIAGTTFLILVVPLIIEMDR 78
+V+ K+ + + A WI T+F+ILV+P++ E ++
Sbjct: 72 FVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 105
>sp|Q9NS69|TOM22_HUMAN Mitochondrial import receptor subunit TOM22 homolog OS=Homo sapiens
GN=TOMM22 PE=1 SV=3
Length = 142
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 45 YVSHKLLKSTGKAAWIAGTTFLILVVPLIIEMDR 78
+V+ K+ + + A WI T+F+ILV+P++ E ++
Sbjct: 72 FVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 105
>sp|O13813|TOM22_SCHPO Mitochondrial import receptor subunit tom22 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tom22 PE=3 SV=1
Length = 144
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 49 KLLKSTGKAAWIAGTTFLILVVPLIIEMDREQQFNELEMQQQSLLGAPP-LAP 100
KL + GK+ W+ T+ L+L VP ++ ++ E Q E E Q + GA +AP
Sbjct: 83 KLAQFGGKSMWVISTSALLLGVPFMMSLEEEAQLTEYEKQIKDQRGANEVIAP 135
>sp|A6QPI6|TOM22_BOVIN Mitochondrial import receptor subunit TOM22 homolog OS=Bos taurus
GN=TOMM22 PE=2 SV=1
Length = 140
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 45 YVSHKLLKSTGKAAWIAGTTFLILVVPLIIEMDR 78
+V+ K+ + + A WI T+F+ILV+P++ E ++
Sbjct: 70 FVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 103
>sp|Q9CPQ3|TOM22_MOUSE Mitochondrial import receptor subunit TOM22 homolog OS=Mus musculus
GN=Tomm22 PE=2 SV=3
Length = 142
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 45 YVSHKLLKSTGKAAWIAGTTFLILVVPLIIEMDR 78
+V+ K+ + + A WI T+F+ILV+P++ E ++
Sbjct: 72 FVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 105
>sp|Q75Q41|TOM22_RAT Mitochondrial import receptor subunit TOM22 homolog OS=Rattus
norvegicus GN=Tomm22 PE=1 SV=1
Length = 142
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 45 YVSHKLLKSTGKAAWIAGTTFLILVVPLIIEMDR 78
+V+ K+ + + A WI T+F+ILV+P++ E ++
Sbjct: 72 FVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 105
>sp|A8FX83|HTPG_SHESH Chaperone protein HtpG OS=Shewanella sediminis (strain HAW-EB3)
GN=htpG PE=3 SV=1
Length = 638
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 8 KRLTNNSGEVGFLAKVTRRVSDTPIVAYTKQKASDAAYVSHKLLKSTGKAAWIAGTTFLI 67
KR+ ++ GE KVT R++DTP + + KL+++ G+A + TF I
Sbjct: 524 KRIKDSLGEKVSAVKVTTRLTDTPACVVAGEGEMSTQMI--KLMEAAGQAVPESKPTFEI 581
Query: 68 L-VVPLIIEMDREQ------QFNELEMQQQSLLGAPPLA 99
PL+ ++ EQ Q+++L +QQ L LA
Sbjct: 582 NPEHPLVARLNDEQDEALFAQWSDLLLQQAQLSEKGSLA 620
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.352
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,744,553
Number of Sequences: 539616
Number of extensions: 1194785
Number of successful extensions: 3022
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3013
Number of HSP's gapped (non-prelim): 14
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 55 (25.8 bits)