BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034108
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LX65|VATH_ARATH V-type proton ATPase subunit H OS=Arabidopsis thaliana GN=VHA-H
PE=2 SV=1
Length = 441
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/103 (84%), Positives = 95/103 (92%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
MHK+ FWR+N+T FEENDFQILRVLLTILDTSSDPR+LAVACFD+SQFIQYH AGRVIV
Sbjct: 339 MHKETNFWRENVTCFEENDFQILRVLLTILDTSSDPRSLAVACFDISQFIQYHAAGRVIV 398
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRLFLGAKYTSFLQA 103
DLKAKERVMKL+NHEN EVTK+A+LCIQRL LGAKY SFLQA
Sbjct: 399 ADLKAKERVMKLINHENAEVTKNAILCIQRLLLGAKYASFLQA 441
>sp|Q84ZC0|VATH_ORYSJ Probable V-type proton ATPase subunit H OS=Oryza sativa subsp.
japonica GN=Os07g0549700 PE=2 SV=1
Length = 452
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 94/102 (92%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
MHKDP FWR+NI NFEENDFQILRVL+TI+DTS+D ALAVAC+DLSQF+QYHP+GR++V
Sbjct: 350 MHKDPSFWRENINNFEENDFQILRVLMTIIDTSADTTALAVACYDLSQFLQYHPSGRIVV 409
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRLFLGAKYTSFLQ 102
DLKAK+RVMKLMNHEN EV K+ALLC+QRLFLGAKY SFLQ
Sbjct: 410 ADLKAKDRVMKLMNHENAEVRKNALLCVQRLFLGAKYASFLQ 451
>sp|Q9U5N0|VATH_MANSE V-type proton ATPase subunit H OS=Manduca sexta PE=2 SV=1
Length = 475
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 61/93 (65%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
+HK FWR+N E ++LR L+ +L+ S DP LAVAC+D+ ++++++P G+ I+
Sbjct: 356 VHKSAKFWRENAARLNERGQELLRTLVHLLEKSHDPVVLAVACYDVGEYVRHYPRGKHII 415
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 93
L K+RVM L++H++ V ALL +Q+L +
Sbjct: 416 EQLGGKQRVMYLLSHDDPNVRYEALLAVQKLMV 448
>sp|Q8BVE3|VATH_MOUSE V-type proton ATPase subunit H OS=Mus musculus GN=Atp6v1h PE=1 SV=1
Length = 483
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 62/93 (66%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
+HK FWR+N E ++++L++L +L+ S DP+ LAVA D+ ++++++P G+ ++
Sbjct: 369 VHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVI 428
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 93
L K+ VM M+HE+ +V +ALL +Q+L +
Sbjct: 429 EQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMV 461
>sp|O46563|VATH_BOVIN V-type proton ATPase subunit H OS=Bos taurus GN=ATP6V1H PE=2 SV=2
Length = 483
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 62/93 (66%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
+HK FWR+N E ++++L++L +L+ S DP+ LAVA D+ ++++++P G+ ++
Sbjct: 369 VHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVI 428
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 93
L K+ VM M+HE+ +V +ALL +Q+L +
Sbjct: 429 EQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMV 461
>sp|Q9TVC1|VATH_PIG V-type proton ATPase subunit H OS=Sus scrofa GN=ATP6V1H PE=2 SV=1
Length = 483
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 62/93 (66%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
+HK FWR+N E ++++L++L +L+ S DP+ LAVA D+ ++++++P G+ ++
Sbjct: 369 VHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVI 428
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 93
L K+ VM M+HE+ +V +ALL +Q+L +
Sbjct: 429 EQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMV 461
>sp|Q9UI12|VATH_HUMAN V-type proton ATPase subunit H OS=Homo sapiens GN=ATP6V1H PE=1 SV=1
Length = 483
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 62/93 (66%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
+HK FWR+N E ++++L++L +L+ S DP+ LAVA D+ ++++++P G+ ++
Sbjct: 369 VHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVI 428
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 93
L K+ VM M+HE+ +V +ALL +Q+L +
Sbjct: 429 EQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMV 461
>sp|Q9V3J1|VATH_DROME V-type proton ATPase subunit H OS=Drosophila melanogaster GN=VhaSFD
PE=2 SV=2
Length = 468
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 62/93 (66%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
+HK FWR+N E ++++LR+L+ +L+TS D L+VACFD+ ++++++P G+ ++
Sbjct: 348 VHKSAKFWRENAQRLNEKNYELLRILVHLLETSKDAIILSVACFDIGEYVRHYPRGKHVL 407
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRLFL 93
L K+ VM+ + HE+ V ALL +Q+L +
Sbjct: 408 EQLGGKQIVMQHLGHEDPNVRYEALLAVQKLMV 440
>sp|Q22494|VATH2_CAEEL Probable V-type proton ATPase subunit H 2 OS=Caenorhabditis elegans
GN=vha-15 PE=3 SV=1
Length = 470
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
+HK FWR+N + F + F+++++L+ +L++S DP L VA D+ ++++++P G+ +V
Sbjct: 356 VHKSEKFWRENASKFNDKQFEVVKILIKLLESSHDPLILCVASHDIGEYVRHYPRGKTVV 415
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRL------FLGAKYTSFLQ 102
+ K VM+L+ E+ V ALL +Q+L +LG + S +Q
Sbjct: 416 EQYQGKAAVMRLLTAEDPNVRYHALLAVQKLMVHNWEYLGKQLDSDVQ 463
>sp|Q619W9|VATH2_CAEBR Probable V-type proton ATPase subunit H 2 OS=Caenorhabditis
briggsae GN=vha-15 PE=3 SV=1
Length = 470
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 65/109 (59%), Gaps = 6/109 (5%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIV 60
+HK FWR+N F + ++++++L+ +L++SSDP L VA D+ ++++++P G+ +V
Sbjct: 356 VHKSEKFWRENAAKFNDKQYEVVKILIKLLESSSDPLILCVASHDIGEYVRHYPRGKTVV 415
Query: 61 TDLKAKERVMKLMNHENTEVTKSALLCIQRL------FLGAKYTSFLQA 103
+ K VM+L+ E+ V ALL +Q+L +LG + S Q
Sbjct: 416 EQQQGKAAVMRLLTAEDPNVRYHALLAVQKLMVHNWEYLGKQLDSDAQG 464
>sp|Q8MML6|VATH_DICDI V-type proton ATPase subunit H OS=Dictyostelium discoideum GN=vatH
PE=1 SV=1
Length = 445
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 1 MHKDPLFWRDNITNFEENDFQILRVLLTILDTS-SDPRALAVACFDLSQFIQYHPAGRVI 59
+HK FW++NI+ FEEN++Q+++ L IL TS S P L++AC DL +F+++H G+ I
Sbjct: 344 VHKSERFWKENISKFEENNYQVIKHLHQILKTSQSTPLQLSIACHDLCEFVRHHSRGKAI 403
Query: 60 VTDLKAKERVMKLMNHENTEVTKSALLCIQRLFLG 94
+T + + R N EV AL +Q++ L
Sbjct: 404 MT-ITNQTRYHGYDVKSNEEVKNQALFALQKMMLN 437
>sp|Q20666|VATH1_CAEEL Probable V-type proton ATPase subunit H 1 OS=Caenorhabditis elegans
GN=vha-18 PE=3 SV=1
Length = 451
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 57/92 (61%)
Query: 2 HKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVT 61
HK +FW +N +N ++L++L+ +L+ S+DP L VA D+ +F++Y+P G++ V
Sbjct: 350 HKCEVFWNENAHRLNDNRQELLKLLVAMLEKSNDPLVLCVAAHDIGEFVRYYPRGKLKVE 409
Query: 62 DLKAKERVMKLMNHENTEVTKSALLCIQRLFL 93
L KE +M+L+ ++ V ALL Q+L +
Sbjct: 410 QLGGKEAMMRLLTVKDPNVRYHALLAAQKLMI 441
>sp|O14265|VATH_SCHPO V-type proton ATPase subunit H OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma13 PE=3 SV=2
Length = 450
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 2 HKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVT 61
H+ FW N E+++ +L+ L I+ + D +LAVAC DL +I+ +P GR ++
Sbjct: 349 HRSEDFWHQNAKRLNEDNYALLKKLFHIVQYNEDNTSLAVACHDLGAYIRSYPEGRSLII 408
Query: 62 DLKAKERVMKLMNHENTEVTKSALLCIQRL 91
AK+R+M LM+H + EV AL +Q L
Sbjct: 409 KYGAKQRIMDLMSHPDPEVRFEALSTVQLL 438
>sp|A8XDF8|VATH1_CAEBR Probable V-type proton ATPase subunit H 1 OS=Caenorhabditis
briggsae GN=vha-18 PE=3 SV=1
Length = 451
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 57/92 (61%)
Query: 2 HKDPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVT 61
HK +FW +N +N ++L++L+T+L+ S+DP L VA D+ +F++Y+P G++ V
Sbjct: 350 HKCEIFWTENAHKLNDNRQELLKMLITMLEKSNDPLVLCVAANDIGEFVRYYPRGKMHVE 409
Query: 62 DLKAKERVMKLMNHENTEVTKSALLCIQRLFL 93
L KE +M+L+ + V ALL Q+L +
Sbjct: 410 QLGGKEALMRLLTVPDPNVRYFALLAAQKLMV 441
>sp|P41807|VATH_YEAST V-type proton ATPase subunit H OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA13 PE=1 SV=1
Length = 478
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 2 HKDPLFWRDNITNFEENDFQILRVLLTILDT---SSDPRA------LAVACFDLSQFIQY 52
H D FW DNI F++++++I R L+ +L + D A + VA D++ ++
Sbjct: 374 HVDNGFWSDNIDEFKKDNYKIFRQLIELLQAKVRNGDVNAKQEKIIIQVALNDITHVVEL 433
Query: 53 HPAGRVIVTDLKAKERVMKLMNHENTEVTKSALLCIQRLF 92
P ++ K +M+L+NH ++ V AL Q +
Sbjct: 434 LPESIDVLDKTGGKADIMELLNHSDSRVKYEALKATQAII 473
>sp|Q503E9|IMA5_DANRE Importin subunit alpha-6 OS=Danio rerio GN=kpna5 PE=2 SV=2
Length = 536
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 19 DFQILRVLLTILDT---SSDPRALAVACFDLSQFIQYHPAGRV-IVTDLKAKERVMKLMN 74
DF + L++L SSDP LA AC+ LS ++ P ++ V D R+++L+
Sbjct: 246 DFAKVSPCLSVLSRLLFSSDPDVLADACWALS-YLSDGPNDKIQTVIDSGVCRRLVELLM 304
Query: 75 HENTEVTKSALLCIQRLFLG 94
H + +V AL + + G
Sbjct: 305 HSDYKVVSPALRAVGNIVTG 324
>sp|Q9NQW1|SC31B_HUMAN Protein transport protein Sec31B OS=Homo sapiens GN=SEC31B PE=1
SV=1
Length = 1179
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 53 HPAGRVIVTDLKAKERVMKLMNHEN 77
HP+G+ +V DL+ E ++K+ +H N
Sbjct: 188 HPSGKAVVWDLRKNEPIIKVSDHSN 212
>sp|Q757R0|VAC8_ASHGO Vacuolar protein 8 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=VAC8 PE=3 SV=3
Length = 568
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 19 DFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVTDLKAKERVMKLMNHENT 78
D ++L +L +L S DP+ AC L + + ++++ ++ E +++ M N
Sbjct: 83 DREVLEPILILLQ-SHDPQIQIAACAALGN-LAVNNENKILIVEMGGLEPLIEQMKSNNV 140
Query: 79 EVTKSALLCIQRL 91
EV +A+ CI L
Sbjct: 141 EVQCNAVGCITNL 153
>sp|Q7VRJ1|UBIE_BLOFL Ubiquinone/menaquinone biosynthesis methyltransferase ubiE
OS=Blochmannia floridanus GN=ubiE PE=3 SV=1
Length = 254
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 7 FWRDNITNFEENDFQILRVL-----LTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVT 61
F N T +++ ++I RVL L ILD S L +DL F G++I
Sbjct: 144 FGLRNFTYKQKSLYEIYRVLRPGGKLLILDFSIPTSKLLTILYDLYSFHIIPKIGKIIAQ 203
Query: 62 DLKAKERVMKLMN-HENTEVTKSALLCI 88
D K+ + +++ + H + E K+ +L I
Sbjct: 204 DSKSYQYLVESIRMHPDQETLKNMILSI 231
>sp|Q02821|IMA1_YEAST Importin subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SRP1 PE=1 SV=1
Length = 542
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 33 SSDPRALAVACFDLSQFIQYHPAGRVIVTDLKAKERVMKLMNHENTEVTKSALLCIQRLF 92
S D L AC+ +S V D++ +R+++L++HE+T V AL + +
Sbjct: 268 SMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIV 327
Query: 93 LG 94
G
Sbjct: 328 TG 329
>sp|Q8SS60|RSSA_ENCCU 40S ribosomal protein S0 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RPS0 PE=1 SV=1
Length = 252
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 15 FEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVTDLKAKE 67
F D ++ V + I + P A+A F LS+ I Y G +V D+K E
Sbjct: 152 FVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSRLINYMKTGAELVRDMKEVE 204
>sp|B6EI57|SYR_ALISL Arginine--tRNA ligase OS=Aliivibrio salmonicida (strain LFI1238)
GN=argS PE=3 SV=1
Length = 577
Score = 28.9 bits (63), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 15/105 (14%)
Query: 4 DPLFWRDNITNFEENDFQILRVLLTILDTSSDPRALAVACFDLSQFIQYHPAGRVIVTDL 63
D +F DNI FE N ++ T + + F + + AG V +TD
Sbjct: 442 DYIFDWDNILAFEGNTAPYMQYAYTRV----------ASIFSKADLSMDNLAGEVKITDE 491
Query: 64 KAKERVMKLMNHEN-----TEVTKSALLCIQRLFLGAKYTSFLQA 103
K K + KLM E + L+C L +++SF +A
Sbjct: 492 KEKALITKLMQFEEAVQAVASEGQPHLMCAYLFELAGQFSSFYEA 536
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,023,036
Number of Sequences: 539616
Number of extensions: 1062607
Number of successful extensions: 3247
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3229
Number of HSP's gapped (non-prelim): 23
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)