BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034117
         (103 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|O49595|HMGB1_ARATH High mobility group B protein 1 OS=Arabidopsis thaliana GN=HMGB1
           PE=1 SV=1
          Length = 178

 Score =  128 bits (322), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 72/101 (71%), Positives = 81/101 (80%), Gaps = 4/101 (3%)

Query: 1   MKGAKGKGAARVSQEALKP-NDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPP 59
           MK AKGK   + ++EALKP +DRKVGKRKA   K    +KR+ ++EKKAKKDPNKPKR P
Sbjct: 1   MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEK---PTKRETRKEKKAKKDPNKPKRAP 57

Query: 60  SAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
           SAFFVFLE+FR TFKKENPNV AVSAVGKA G KWKSMS A
Sbjct: 58  SAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQA 98


>sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1
          Length = 152

 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/54 (79%), Positives = 46/54 (85%)

Query: 47  KAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
           KA KDPNKPKRPPSAFFVF+EEFRK F KE+P   AVSAVGKAAG KWK+MS A
Sbjct: 36  KAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDA 89


>sp|Q42344|HMGB4_ARATH High mobility group B protein 4 OS=Arabidopsis thaliana GN=HMGB4
          PE=1 SV=1
          Length = 138

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 57/98 (58%), Gaps = 20/98 (20%)

Query: 1  MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGKREKKAKKDPNKPKRPPS 60
          MKG + K  A  + + LK   RK GK                    K KKDPN+PKRPPS
Sbjct: 1  MKGGESKAEATSTDQRLKTRGRKAGK--------------------KTKKDPNQPKRPPS 40

Query: 61 AFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          AFFVFLE+FRK F   NPN  +V+ VGKAAG +WK+M+
Sbjct: 41 AFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMT 78


>sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1
          Length = 144

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 38/58 (65%), Positives = 49/58 (84%)

Query: 43  KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
           K+ KKA KDPNKPKRPPSAFFVF+E+FRKT+K+++PN  +V+ VGKA G KWK ++ A
Sbjct: 24  KKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAA 81


>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1
          Length = 157

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 64/102 (62%), Gaps = 22/102 (21%)

Query: 1  MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGK----REKKAKKDPNKPK 56
          MKGAK KGAA+                  A AKL   SK   K    R+ KA KDPNKPK
Sbjct: 1  MKGAKSKGAAK------------------ADAKLAVKSKGAEKPAKGRKGKAGKDPNKPK 42

Query: 57 RPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          R PSAFFVF+EEFRK FK++NP   +V+AVGKAAG +WKS+S
Sbjct: 43 RAPSAFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLS 84


>sp|O49596|HMGB2_ARATH High mobility group B protein 2 OS=Arabidopsis thaliana GN=HMGB2
          PE=1 SV=1
          Length = 144

 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 46/55 (83%)

Query: 44 REKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          R K A KDPNKPKRP SAFFVF+E+FR+TFKKENP   +V+ VGKAAG KWKS+S
Sbjct: 27 RGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKWKSLS 81


>sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1
          Length = 149

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 33/49 (67%), Positives = 43/49 (87%)

Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          KDPNKPKRPPSAFFVF+ +FR+ +KK++PN  +V+AVGKA G +WKS+S
Sbjct: 40 KDPNKPKRPPSAFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLS 88


>sp|P93047|HMGB3_ARATH High mobility group B protein 3 OS=Arabidopsis thaliana GN=HMGB3
          PE=1 SV=1
          Length = 141

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/63 (61%), Positives = 49/63 (77%)

Query: 36 SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
          S +K+  K  K A KDPNKPKRP SAFFVF+E+FR T+K+E+P   +V+AVGKA G KWK
Sbjct: 16 SVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWK 75

Query: 96 SMS 98
          S+S
Sbjct: 76 SLS 78


>sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1
          Length = 161

 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/103 (50%), Positives = 63/103 (61%), Gaps = 23/103 (22%)

Query: 1  MKGAKGKGAARVSQEALKPNDRKVGKRKAATAKLDSGSKRQGK-----REKKAKKDPNKP 55
          MKGAK KGAA+                  A AKL   SK   K     ++ KA KDPNKP
Sbjct: 1  MKGAKSKGAAK------------------ADAKLAVKSKGAEKPAAKGKKGKAGKDPNKP 42

Query: 56 KRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          KR PSAFFVF+ EFR+ FK++NP   +V+AVGKAAG +WKS+S
Sbjct: 43 KRAPSAFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLS 85


>sp|O49597|HMGB5_ARATH High mobility group B protein 5 OS=Arabidopsis thaliana GN=HMGB5
          PE=2 SV=1
          Length = 125

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/64 (53%), Positives = 45/64 (70%)

Query: 35 DSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
          D   K +G +  K  KDPN+PK+PPS FFVFL++FRK F   NP+  +V  VG+AAG KW
Sbjct: 14 DDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKW 73

Query: 95 KSMS 98
          K+M+
Sbjct: 74 KTMT 77


>sp|O64702|HMG14_ARATH High mobility group B protein 14 OS=Arabidopsis thaliana GN=HMGB14
           PE=2 SV=2
          Length = 151

 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 35/44 (79%)

Query: 55  PKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           PK+P +AFF FL++FRK +++ENP+V ++  +GK  G KWK+M+
Sbjct: 63  PKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMT 106


>sp|Q8LDF9|HMGB7_ARATH High mobility group B protein 7 OS=Arabidopsis thaliana GN=HMGB7
           PE=1 SV=1
          Length = 241

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 45  EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           EKK+    NKPKRP +AFF+F+ +FRKTFK E+    A  A  K  G KWKS++
Sbjct: 105 EKKSSSTSNKPKRPLTAFFIFMSDFRKTFKSEHNGSLAKDA-AKIGGEKWKSLT 157


>sp|P0CO24|NHP6_CRYNJ Non-histone chromosomal protein 6 OS=Cryptococcus neoformans var.
          neoformans serotype D (strain JEC21 / ATCC MYA-565)
          GN=NHP6 PE=3 SV=1
          Length = 116

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          K+ KKDPNKPKR  SA+  F++++R+  K ENP  T    VGK  G KW+ M+
Sbjct: 19 KRTKKDPNKPKRALSAYMFFVQDYRERIKTENPEAT-FGDVGKLLGIKWREMN 70


>sp|P0CO25|NHP6_CRYNB Non-histone chromosomal protein 6 OS=Cryptococcus neoformans var.
          neoformans serotype D (strain B-3501A) GN=NHP6 PE=3
          SV=1
          Length = 116

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          K+ KKDPNKPKR  SA+  F++++R+  K ENP  T    VGK  G KW+ M+
Sbjct: 19 KRTKKDPNKPKRALSAYMFFVQDYRERIKTENPEAT-FGDVGKLLGIKWREMN 70


>sp|Q4H2R2|SSRP1_CIOIN FACT complex subunit SSRP1 OS=Ciona intestinalis GN=SSRP1 PE=2 SV=1
          Length = 704

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
           K+ KKDPN PKRP SA+F++L E R  FK EN  + +V+ + K AG +WK + P
Sbjct: 545 KRKKKDPNAPKRPQSAYFLWLNENRGRFKAENKGI-SVTELTKLAGKEWKKIDP 597


>sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus gallus GN=HMGB3 PE=2 SV=2
          Length = 202

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/48 (50%), Positives = 30/48 (62%), Gaps = 1/48 (2%)

Query: 51  DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           DPN PKRPPSAFF+F  EFR   K  NP ++ +  V K  G  W ++S
Sbjct: 89  DPNAPKRPPSAFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLS 135


>sp|Q7S045|NHP6_NEUCR Non-histone chromosomal protein 6 OS=Neurospora crassa (strain
          ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
          987) GN=nhp-6 PE=3 SV=1
          Length = 103

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 2/62 (3%)

Query: 38 SKRQGKREKK-AKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKS 96
          SK  GK EK+ AKKDPN PKR  SA+  F  E R+  ++ENP V+    VGK  G +WK+
Sbjct: 8  SKTTGKVEKRRAKKDPNAPKRGLSAYMFFANEQRENVREENPGVS-FGQVGKILGERWKA 66

Query: 97 MS 98
          +S
Sbjct: 67 LS 68


>sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musculus GN=Hmgb3 PE=2 SV=3
          Length = 200

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 51  DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           DPN PKRPPS FF+F  EFR   K  NP ++ +  V K  G  W ++S
Sbjct: 89  DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLS 135


>sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taurus GN=HMGB3 PE=2 SV=2
          Length = 200

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 51  DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           DPN PKRPPS FF+F  EFR   K  NP ++ +  V K  G  W ++S
Sbjct: 89  DPNAPKRPPSGFFLFCSEFRPKIKSANPGIS-IGDVAKKLGEMWNNLS 135


>sp|Q8WW32|HMGB4_HUMAN High mobility group protein B4 OS=Homo sapiens GN=HMGB4 PE=2 SV=2
          Length = 186

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 7/73 (9%)

Query: 30  ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
           A AKLD    ++      GKR+K+ K+DP +P+RPPS+F +F ++     K+ENPN + V
Sbjct: 62  ALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSVV 121

Query: 84  SAVGKAAGGKWKS 96
             V KA G  W +
Sbjct: 122 Q-VAKATGKMWST 133



 Score = 30.4 bits (67), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 54 KPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          KPK   S++  FL  +R  FK++ PN         +    KW+S+S
Sbjct: 8  KPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSIS 53


>sp|Q4PBZ9|NHP6_USTMA Non-histone chromosomal protein 6 OS=Ustilago maydis (strain 521 /
           FGSC 9021) GN=NHP6 PE=3 SV=2
          Length = 99

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 43  KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
           KR  KAKKDP+ PKRP SA+  F ++ R+  K  NP       VG+  G KWK MS A
Sbjct: 16  KRTTKAKKDPDAPKRPLSAYMFFSQDQRERVKNANPEA-GFGEVGRLLGAKWKEMSEA 72


>sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus gallus GN=HMGB1 PE=2 SV=2
          Length = 201

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 51  DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           DPN PKRPPS FF+F  EFR   K  NP ++ +  V K  G  W ++S
Sbjct: 88  DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLS 134


>sp|P12682|HMGB1_PIG High mobility group protein B1 OS=Sus scrofa GN=HMGB1 PE=2 SV=3
          Length = 215

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|P40632|NHP1_BABBO High mobility group protein homolog NHP1 OS=Babesia bovis PE=1
          SV=1
          Length = 97

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 37 GSKRQG-KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVT-AVSAVGKAAGGKW 94
           S R G +R +KAKKDPN PKR  S++  F +E R     ENP +   V+A+GK  G  W
Sbjct: 4  ASDRTGVRRPRKAKKDPNAPKRALSSYMFFAKEKRVEIIAENPEIAKDVAAIGKMIGAAW 63

Query: 95 KSMS 98
           ++S
Sbjct: 64 NALS 67


>sp|P63159|HMGB1_RAT High mobility group protein B1 OS=Rattus norvegicus GN=Hmgb1 PE=1
           SV=2
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|A9RA84|HMGB1_PAPAN High mobility group protein B1 OS=Papio anubis GN=HMGB1 PE=3 SV=1
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|P63158|HMGB1_MOUSE High mobility group protein B1 OS=Mus musculus GN=Hmgb1 PE=1 SV=2
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|Q4R844|HMGB1_MACFA High mobility group protein B1 OS=Macaca fascicularis GN=HMGB1 PE=2
           SV=3
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sapiens GN=HMGB1 PE=1 SV=3
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus caballus GN=HMGB1 PE=2 SV=3
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis familiaris GN=HMGB1 PE=2
           SV=3
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Callicebus moloch GN=HMGB1 PE=3
           SV=1
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithrix jacchus GN=HMGB1 PE=3
           SV=1
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taurus GN=HMGB1 PE=1 SV=3
          Length = 215

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMW 133



 Score = 31.6 bits (70), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K DP KP+   S++  F++  R+  KK++P+ +   S   K    +WK+MS
Sbjct: 3  KGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMS 53


>sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) OS=Cricetulus griseus
           GN=HMGB1 PE=1 SV=1
          Length = 180

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           KK  KDPN PKRPPSAFF+F  E+R   K E+P ++ +  V K  G  W + +
Sbjct: 51  KKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLS-IGDVAKKLGEMWNNTA 102


>sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sapiens GN=HMGB3 PE=1 SV=4
          Length = 200

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 51  DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           DPN PKRPPS FF+F  EFR   K  NP ++ +  V K  G  W +++
Sbjct: 89  DPNAPKRPPSGFFLFCSEFRPKIKSTNPGIS-IGDVAKKLGEMWNNLN 135


>sp|Q4IQX3|NHP6_GIBZE Non-histone chromosomal protein 6 OS=Gibberella zeae (strain PH-1
          / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=NHP6 PE=3
          SV=1
          Length = 101

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 46 KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          K+AKKDPN PKR  SA+  F  E R+  ++ENP ++    VGK  G +WK+++
Sbjct: 15 KRAKKDPNAPKRGLSAYMFFANEQRENVREENPGIS-FGQVGKLLGERWKALN 66


>sp|P07746|HMGT_ONCMY High mobility group-T protein OS=Oncorhynchus mykiss PE=2 SV=2
          Length = 204

 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           KK  KDPN PKRP SAFF+F  +FR   K E P ++ +  V K  G KW +++
Sbjct: 85  KKRFKDPNAPKRPSSAFFIFCADFRPQVKGETPGLS-IGDVAKKLGEKWNNLT 136



 Score = 31.2 bits (69), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 50 KDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          KDP KP+   S++  F++  R+  KK++P  +   S   K    +WK+MS
Sbjct: 3  KDPRKPRGKMSSYAYFVQTRREEHKKKHPEASVNFSEFSKKCSERWKTMS 52


>sp|P0C6E5|HMG3M_HUMAN Putative high mobility group protein B3-like protein OS=Homo
           sapiens PE=5 SV=1
          Length = 187

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 28  KAATAKLDSGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVG 87
           KA     D   K  G  +   KKDPN PKRPPS FF+F  EF    K  NP +  +  V 
Sbjct: 65  KADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNPGI-PIGDVA 123

Query: 88  KAAGGKWKSMS 98
           K  G  WK+++
Sbjct: 124 KKLGEMWKNLN 134


>sp|P11633|NHP6B_YEAST Non-histone chromosomal protein 6B OS=Saccharomyces cerevisiae
          (strain ATCC 204508 / S288c) GN=NHP6B PE=1 SV=3
          Length = 99

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          KR  + KKDPN PKR  SA+  F  E R   + ENP+VT    VG+  G +WK+++
Sbjct: 15 KRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVT-FGQVGRILGERWKALT 69


>sp|B2RPK0|HGB1A_HUMAN Putative high mobility group protein B1-like 1 OS=Homo sapiens
           GN=HMGB1P1 PE=5 SV=1
          Length = 211

 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 46  KKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKW 94
           KK  KDPN PKRPPSAFF+F  E+    K E+P ++ +  V K  G  W
Sbjct: 86  KKKFKDPNAPKRPPSAFFLFCSEYHPKIKGEHPGLS-IGDVAKKLGEMW 133


>sp|P23497|SP100_HUMAN Nuclear autoantigen Sp-100 OS=Homo sapiens GN=SP100 PE=1 SV=3
          Length = 879

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 51  DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSPA 100
           DPN PKRPP AFF+F  E+R   K E+P ++    V K A G W + + A
Sbjct: 765 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLA-GMWNNTAAA 813


>sp|Q4WY33|NHP6_ASPFU Non-histone chromosomal protein 6 OS=Neosartorya fumigata (strain
           ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=nhp6
           PE=3 SV=1
          Length = 104

 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)

Query: 36  SGSKRQGKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWK 95
           + ++ + KR ++ KKDPN PKR  SA+  F  E R   ++ENP ++    VGK  G +WK
Sbjct: 6   TSTRTKTKRVERKKKDPNAPKRGLSAYMFFANENRDKVREENPGIS-FGQVGKMLGERWK 64

Query: 96  SMSPA 100
           ++S +
Sbjct: 65  ALSDS 69


>sp|P11632|NHP6A_YEAST Non-histone chromosomal protein 6A OS=Saccharomyces cerevisiae
          (strain ATCC 204508 / S288c) GN=NHP6A PE=1 SV=1
          Length = 93

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 51 DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMSP 99
          DPN PKR  SA+  F  E R   + ENP++T    VGK  G KWK+++P
Sbjct: 17 DPNAPKRALSAYMFFANENRDIVRSENPDIT-FGQVGKKLGEKWKALTP 64


>sp|Q6CVH3|NHP6_KLULA Non-histone chromosomal protein 6 OS=Kluyveromyces lactis (strain
          ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
          Y-1140 / WM37) GN=NHP6 PE=3 SV=1
          Length = 93

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 43 KREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
          K+ ++ KKDPN PKR  SA+  F  E R   + ENP +T    VG+  G KWK+++
Sbjct: 6  KKTQRKKKDPNAPKRALSAYMFFANENRDIVRAENPGIT-FGQVGRILGEKWKALN 60


>sp|Q32L34|HMGB4_BOVIN High mobility group protein B4 OS=Bos taurus GN=HMGB4 PE=2 SV=1
          Length = 194

 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 7/71 (9%)

Query: 30  ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
           A AKLD    ++      G+R+K+ K+DP+ P+RPPS+F +F ++     K ENP+ + V
Sbjct: 62  ALAKLDKARYQEEMMNYFGRRKKRRKRDPHAPRRPPSSFLLFCQDHYAQLKSENPSWSVV 121

Query: 84  SAVGKAAGGKW 94
             V KA+G  W
Sbjct: 122 Q-VAKASGKMW 131



 Score = 33.1 bits (74), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          K+D  KPK   S++  FL  +R  FK++ PN         +    KW+S+S
Sbjct: 3  KRDQLKPKANVSSYIHFLLNYRNKFKEQQPNTYLGFKEFSRKCSEKWRSIS 53


>sp|Q9N1Q6|SP100_GORGO Nuclear autoantigen Sp-100 (Fragment) OS=Gorilla gorilla gorilla
           GN=SP100 PE=2 SV=1
          Length = 225

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 26/41 (63%)

Query: 51  DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
           DPN PKRPP AFF+F  E+R   K E+P ++    V K AG
Sbjct: 114 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAG 154


>sp|Q9N1Q7|SP100_PANTR Nuclear autoantigen Sp-100 (Fragment) OS=Pan troglodytes GN=SP100
           PE=2 SV=1
          Length = 215

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/41 (51%), Positives = 26/41 (63%)

Query: 51  DPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAG 91
           DPN PKRPP AFF+F  E+R   K E+P ++    V K AG
Sbjct: 120 DPNAPKRPPLAFFLFCSEYRPKIKGEHPGLSIDDVVKKLAG 160


>sp|Q6P8W9|HMGB4_MOUSE High mobility group protein B4 OS=Mus musculus GN=Hmgb4 PE=2 SV=1
          Length = 181

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 7/77 (9%)

Query: 30  ATAKLDSGSKRQ------GKREKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAV 83
           A A+LD    +Q      GKR K+ K+DP  P++PPS+F +F  +     K+ENP+ T V
Sbjct: 62  ALAELDKARYQQEMMNYIGKRRKRRKRDPKAPRKPPSSFLLFSRDHYAMLKQENPDWTVV 121

Query: 84  SAVGKAAGGKWKSMSPA 100
             V KAAG  W +   A
Sbjct: 122 Q-VAKAAGKMWSTTDEA 137



 Score = 32.0 bits (71), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 49 KKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTA-VSAVGKAAGGKWKSMS 98
          +KD  +PK   S++  F+  FR  FK++ PN         +    KW+S+S
Sbjct: 3  EKDQLRPKVNVSSYIHFMLNFRNKFKEQQPNTYLGFKEFSRKCSEKWRSIS 53


>sp|Q9W602|SSRP1_XENLA FACT complex subunit SSRP1 OS=Xenopus laevis GN=ssrp1 PE=1 SV=1
          Length = 693

 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)

Query: 45  EKKAKKDPNKPKRPPSAFFVFLEEFRKTFKKENPNVTAVSAVGKAAGGKWKSMS 98
           E K  KDP  PKRP SA+ ++L   R+  K ENP + +++ + K AG  WK+MS
Sbjct: 531 EAKKTKDPGAPKRPMSAYMLWLNASREKIKSENPGI-SITDLSKKAGEIWKNMS 583


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.308    0.125    0.346 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,214,454
Number of Sequences: 539616
Number of extensions: 1349954
Number of successful extensions: 7087
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 244
Number of HSP's that attempted gapping in prelim test: 6646
Number of HSP's gapped (non-prelim): 591
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)