Query 034120
Match_columns 103
No_of_seqs 101 out of 143
Neff 4.0
Searched_HMMs 13730
Date Mon Mar 25 16:59:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034120.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034120hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dxsa_ a.60.1.2 (A:) C-termin 26.0 16 0.0012 20.2 1.7 19 10-28 30-48 (57)
2 d2c0ga2 c.47.1.7 (A:1024-1145) 13.0 14 0.001 22.3 -0.7 11 44-55 25-35 (122)
3 d1a8ya1 c.47.1.3 (A:3-126) Cal 8.8 37 0.0027 20.1 0.2 8 45-53 35-42 (124)
4 d1h8ba_ a.39.1.7 (A:) alpha-Ac 8.4 20 0.0015 21.5 -1.2 30 9-39 21-50 (73)
5 d2eiaa1 a.28.3.1 (A:148-222) E 7.8 91 0.0067 17.9 1.7 12 63-74 14-25 (75)
6 d1a8oa_ a.28.3.1 (A:) HIV caps 7.7 94 0.0069 17.6 1.7 12 63-74 11-22 (70)
7 d1qrjb1 a.28.3.1 (B:131-214) H 7.1 1E+02 0.0074 18.3 1.7 11 63-73 14-24 (84)
8 d1cjaa_ d.144.1.3 (A:) Actin-f 6.6 1.1E+02 0.0077 23.0 2.0 44 20-76 203-253 (342)
9 d1mcvi_ g.3.2.1 (I:) Trypsin i 6.1 53 0.0038 16.3 -0.0 10 35-44 4-13 (28)
10 d1x4pa1 a.217.1.1 (A:8-60) Arg 6.1 1.7E+02 0.013 16.2 2.3 30 42-75 24-53 (53)
No 1
>d1dxsa_ a.60.1.2 (A:) C-terminal domain of p73 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.02 E-value=16 Score=20.22 Aligned_cols=19 Identities=26% Similarity=0.356 Sum_probs=16.3
Q ss_pred ccCCHHHHHhCCCCCCCCc
Q 034120 10 MIATQEEMVEARVPIPYRD 28 (103)
Q Consensus 10 m~aTqeEM~~ArlPl~~RD 28 (103)
..+|.+++.+-+||.++|.
T Consensus 30 ~~lt~eDL~~lGI~~~hr~ 48 (57)
T d1dxsa_ 30 QNLTIEDLGALKIPEQYRM 48 (57)
T ss_dssp HTCCHHHHHHTTCCTTTHH
T ss_pred HHhhHHHHHHcCCCHHHHH
Confidence 4579999999999988774
No 2
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=13.04 E-value=14 Score=22.27 Aligned_cols=11 Identities=18% Similarity=0.186 Sum_probs=8.0
Q ss_pred ccCCCcCCCccc
Q 034120 44 EFYLPWKCENER 55 (103)
Q Consensus 44 ~~~~~~~C~hEr 55 (103)
.||.+| |.|-+
T Consensus 25 ~Fya~w-C~~ck 35 (122)
T d2c0ga2 25 KFDIAS-PYGEK 35 (122)
T ss_dssp EEEESS-CCSHH
T ss_pred EEECCC-CCccc
Confidence 468889 98644
No 3
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=8.84 E-value=37 Score=20.10 Aligned_cols=8 Identities=13% Similarity=0.193 Sum_probs=6.3
Q ss_pred cCCCcCCCc
Q 034120 45 FYLPWKCEN 53 (103)
Q Consensus 45 ~~~~~~C~h 53 (103)
||.|| |+|
T Consensus 35 Fyapw-C~~ 42 (124)
T d1a8ya1 35 YHEPP-EDD 42 (124)
T ss_dssp EECCC-CSS
T ss_pred EECCC-ccc
Confidence 68888 874
No 4
>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.38 E-value=20 Score=21.53 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=24.7
Q ss_pred CccCCHHHHHhCCCCCCCCcchhhhccChhh
Q 034120 9 KMIATQEEMVEARVPIPYRDQCAHLLIPLNK 39 (103)
Q Consensus 9 ~m~aTqeEM~~ArlPl~~RDyCAh~LI~l~k 39 (103)
.+.+|++||..+ |+...=+||....-+++.
T Consensus 21 KpyVT~~dL~~~-L~peqaeyc~~~M~~y~~ 50 (73)
T d1h8ba_ 21 KPYILAEELRRE-LPPDQAQYCIKRMPAYSG 50 (73)
T ss_dssp CSSBCHHHHHHH-SCHHHHHHHHHHSCSCCC
T ss_pred CCeeCHHHHHhh-cCHHHHHHHHHHCcccCC
Confidence 567899999866 888889999998877744
No 5
>d2eiaa1 a.28.3.1 (A:148-222) EIAV capsid protein p26 {Equine infectious anemia virus [TaxId: 11665]}
Probab=7.77 E-value=91 Score=17.93 Aligned_cols=12 Identities=25% Similarity=0.492 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHH
Q 034120 63 YELVMERMLQMQ 74 (103)
Q Consensus 63 y~D~~~Rmke~e 74 (103)
|.||+.|+-+--
T Consensus 14 f~dfVdRl~~a~ 25 (75)
T d2eiaa1 14 YPEFVDRLLSQI 25 (75)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 789999996643
No 6
>d1a8oa_ a.28.3.1 (A:) HIV capsid protein, dimerisation domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=7.65 E-value=94 Score=17.55 Aligned_cols=12 Identities=8% Similarity=0.288 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHH
Q 034120 63 YELVMERMLQMQ 74 (103)
Q Consensus 63 y~D~~~Rmke~e 74 (103)
|.||+.|+-+--
T Consensus 11 f~dfV~Rl~~~~ 22 (70)
T d1a8oa_ 11 FRDYVDRFYKTL 22 (70)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 789999987644
No 7
>d1qrjb1 a.28.3.1 (B:131-214) HTLV-I capsid protein {Human T-cell leukemia virus type 1 [TaxId: 11908]}
Probab=7.08 E-value=1e+02 Score=18.29 Aligned_cols=11 Identities=27% Similarity=0.431 Sum_probs=8.9
Q ss_pred HHHHHHHHHHH
Q 034120 63 YELVMERMLQM 73 (103)
Q Consensus 63 y~D~~~Rmke~ 73 (103)
|.||+.|+-+-
T Consensus 14 f~dfVdRl~~a 24 (84)
T d1qrjb1 14 YHAFVERLNIA 24 (84)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 78999998663
No 8
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=6.63 E-value=1.1e+02 Score=23.05 Aligned_cols=44 Identities=11% Similarity=0.150 Sum_probs=26.1
Q ss_pred CCCCCCCCc--chhhhccChhhhhhhccC-----CCcCCCccccccccchHHHHHHHHHHHHHH
Q 034120 20 ARVPIPYRD--QCAHLLIPLNKCRQAEFY-----LPWKCENERHSYEKCEYELVMERMLQMQKI 76 (103)
Q Consensus 20 ArlPl~~RD--yCAh~LI~l~kCr~~~~~-----~~~~C~hErH~YekCqy~D~~~Rmke~er~ 76 (103)
-|+||.||+ .=+++++.. ++++ ...-|.+.. .+|+.|++++=+.
T Consensus 203 DR~PL~Wrn~GN~~Niml~~-----n~~~~~~IDs~i~~~n~S--------~~y~~rv~~~L~~ 253 (342)
T d1cjaa_ 203 DRLPIAWTNEGNLDNIMLSE-----RGATVVPIDSKIIPLDAS--------HPHGERVRELLRT 253 (342)
T ss_dssp SSSCSSSCSCCCGGGEEEES-----BTTCEEECSCCCCCCCSS--------CTHHHHHHHHHHH
T ss_pred ccccccccCCCCccceEEec-----CCcEEEEecCCcccCCch--------HHHHHHHHHHHHH
Confidence 388999994 445555542 2322 112366665 6678888886443
No 9
>d1mcvi_ g.3.2.1 (I:) Trypsin inhibitor {Jumping cucumber (Ecballium elaterium) [TaxId: 3679]}
Probab=6.14 E-value=53 Score=16.27 Aligned_cols=10 Identities=20% Similarity=0.654 Sum_probs=7.9
Q ss_pred cChhhhhhhc
Q 034120 35 IPLNKCRQAE 44 (103)
Q Consensus 35 I~l~kCr~~~ 44 (103)
+.+++|++++
T Consensus 4 leym~c~~ds 13 (28)
T d1mcvi_ 4 LEYMRCKQDS 13 (28)
T ss_dssp CCCCBCSSGG
T ss_pred chhhhccccc
Confidence 4678898887
No 10
>d1x4pa1 a.217.1.1 (A:8-60) Arginine/serine-rich-splicing factor 14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.09 E-value=1.7e+02 Score=16.21 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=20.4
Q ss_pred hhccCCCcCCCccccccccchHHHHHHHHHHHHH
Q 034120 42 QAEFYLPWKCENERHSYEKCEYELVMERMLQMQK 75 (103)
Q Consensus 42 ~~~~~~~~~C~hErH~YekCqy~D~~~Rmke~er 75 (103)
..+.|..|+=.+|.. =+|.=|+.++.|++|
T Consensus 24 ~k~~P~yWFLsde~S----lEyKYYkLkLae~QR 53 (53)
T d1x4pa1 24 LKEDPAYWFLSDENS----LEYKYYKLKLAEMQR 53 (53)
T ss_dssp HHHSGGGCTTTCCSS----SHHHHHHHHHHHHHH
T ss_pred hhcCCCeEEeecccc----hhHHHHHhhHHHhcC
Confidence 345566676555533 377889999999875
Done!