BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034125
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 5/55 (9%)
Query: 20 EEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMP 74
E +CA+C++ E+ D S + +M C H+FH DC+ PWLE +CPVC F++P
Sbjct: 212 EMNQCAVCMD-EFEDGSDVKQMPCKHVFHQDCLLPWLELH----NSCPVCRFELP 261
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 14 RSNHTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQM 73
+SN E +CA+C++ ++ + + +M C H++H DC+ PWLE +CPVC ++
Sbjct: 214 KSNLNSEFNQCAVCMD-DFEEGTEAKQMPCKHLYHKDCLLPWLELH----NSCPVCRHEL 268
Query: 74 PL--PSFE 79
P P +E
Sbjct: 269 PTDDPDYE 276
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 21 EAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
E ECAICL + DE+ + +C H+FH CI WLE + CPVC
Sbjct: 125 ELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHV----TCPVC 169
>sp|Q1MTR5|YG66_SCHPO Uncharacterized RING finger membrane protein C15C4.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC15C4.06c PE=4 SV=1
Length = 556
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 12 GQRSNHTDEEAECAICLEKEYSDESAMIR-MQCSHIFHADCITPWLEERLGKSCACPVC 69
+R + ++ EC ICL EYS+ES + R + C HIFH CI P+L L S CP+C
Sbjct: 486 AERGSKYFDQRECTICL-CEYSEESPLYRELPCHHIFHPACIDPYL---LKNSDLCPLC 540
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMPLPS 77
DE CAICLE EY D + + CSH +H C+ PWL + CPVC Q +PS
Sbjct: 235 DEYDVCAICLE-EYEDGDKLRILPCSHAYHCKCVDPWLTK---TKKTCPVCK-QKVVPS 288
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMPLPS 77
DE CAICLE EY D + + CSH +H C+ PWL + CPVC Q +PS
Sbjct: 235 DEYDVCAICLE-EYEDGDKLRILPCSHAYHCKCVDPWLTK---TKKTCPVCK-QKVVPS 288
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 24 CAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQM 73
CA+C+E Y + + C H+FH C+ PWL E C CP+C +
Sbjct: 264 CAVCIE-SYKQNDVVRVLPCKHVFHKSCVDPWLSEH----CTCPMCKLNI 308
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 24 CAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQM 73
CA+C+E Y + + C H+FH C+ PWL E C CP+C +
Sbjct: 264 CAVCIE-SYKQNDVVRVLPCKHVFHKSCVDPWLSEH----CTCPMCKLNI 308
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMPLPSF 78
DE CAICL+ EY D + + CSH +H C+ PWL + CPVC Q +PS
Sbjct: 235 DEYDVCAICLD-EYEDGDKLRILPCSHAYHCKCVDPWLTK---TKKTCPVCK-QKVVPSQ 289
Query: 79 EELSSKVKSN 88
+ S+ S+
Sbjct: 290 GDSDSETDSS 299
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMPLPS 77
DE CAICL+ EY D + + CSH +H C+ PWL + CPVC Q +PS
Sbjct: 235 DEYDVCAICLD-EYEDGDKLRILPCSHAYHCKCVDPWLTK---TKKTCPVCK-QKVVPS 288
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMPLPS 77
DE CAICL+ EY D + + CSH +H C+ PWL + CPVC Q +PS
Sbjct: 235 DEYDVCAICLD-EYEDGDKLRILPCSHAYHCKCVDPWLTK---TKKTCPVCK-QKVVPS 288
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 24 CAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQM 73
CA+C+E Y + + C H+FH C+ PWL E C CP+C +
Sbjct: 264 CAVCIE-SYKQNDVVRILPCKHVFHKSCVDPWLSEH----CTCPMCKLNI 308
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMPLPS 77
DE CAICL+ EY D + + CSH +H C+ PWL + CPVC Q +PS
Sbjct: 235 DEYDVCAICLD-EYEDGDKLRILPCSHAYHCKCVDPWLTK---TKKTCPVCK-QKVVPS 288
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 20 EEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQM-PLPSF 78
E EC +CL + DE+ + QC H+FH CI WL + CP+C + P+P
Sbjct: 114 EALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQ----TTCPLCRANLVPVPG- 168
Query: 79 EELSSKV 85
E +SS++
Sbjct: 169 ESVSSEI 175
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 23 ECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
ECA+CL + DE+ + C H+FHADC+ WL E CP+C
Sbjct: 134 ECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH----STCPLC 176
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 21 EAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMP 74
+ +C +CL E+ E +I M C H+FH++CI PW L K+ +CP+C ++P
Sbjct: 85 DLKCPVCL-LEFEAEETVIEMPCHHLFHSNCILPW----LSKTNSCPLCRHELP 133
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 23 ECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
ECAICL + DE+ + +C H+FH CI WL+ + CPVC
Sbjct: 123 ECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHV----TCPVC 165
>sp|Q8W4Q5|RIN3_ARATH E3 ubiquitin protein ligase RIN3 OS=Arabidopsis thaliana GN=RIN3
PE=1 SV=2
Length = 577
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
D + ECAIC E + R+ C+H+FH C+ WL++ L + +CP C
Sbjct: 332 DYDDECAICREPMAKAK----RLHCNHLFHLGCLRSWLDQGLNEVYSCPTC 378
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 6/55 (10%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCA---CPVCP 70
DEE EC IC+E + +I++ C H FH +CI PWL R+ +CA PV P
Sbjct: 391 DEEGECTICMEM-FKINDDVIQLPCKHYFHENCIKPWL--RVNGTCAICRAPVDP 442
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 17 HTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMP 74
D+ +C +CL E+ ++ ++ M C H+FH CI PW L K+ +CP+C ++P
Sbjct: 72 QADKGVKCPVCL-LEFEEQESVREMPCKHLFHTGCILPW----LNKTNSCPLCRLELP 124
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 17 HTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMPL- 75
D +C +CL E+ + + ++ C H+FH+ CI PW LGK+ +CP+C ++P
Sbjct: 72 QADAALKCPVCL-LEFEEGETVRQLPCEHLFHSACILPW----LGKTNSCPLCRHELPTD 126
Query: 76 -PSFEEL 81
P +EE
Sbjct: 127 SPDYEEF 133
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
DE CAICL+ EY D + + C+H +H+ C+ PWL + CP+C
Sbjct: 225 DEYDVCAICLD-EYEDGDKLRVLPCAHAYHSRCVDPWLTQ---TRKTCPIC 271
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
DE CAICL+ EY D + + C+H +H+ C+ PWL + CP+C
Sbjct: 225 DEYDVCAICLD-EYEDGDKLRILPCAHAYHSRCVDPWLTQ---TRKTCPIC 271
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 17 HTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
H EC +C E +Y+ ++ ++ C+H+FH DCI PWLE+ CPVC
Sbjct: 220 HVGSGLECPVCKE-DYTVGESVRQLPCNHLFHNDCIIPWLEQH----DTCPVC 267
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 2 RELSRGACGEGQRSNHTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLG 61
R + C + Q T CAICL+ EY + + + CSH +H CI PW +
Sbjct: 287 RLVKTSTCQKAQVRTFTRRNDLCAICLD-EYEEGDQLKILPCSHTYHCKCIDPWFSQAPR 345
Query: 62 KSCACPVC 69
+S CPVC
Sbjct: 346 RS--CPVC 351
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 20 EEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQM-PLP 76
E EC++CL + DE+ + +C H+FH CI WL CP+C + P+P
Sbjct: 140 EALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSH----TTCPLCRADLIPVP 193
>sp|Q8VYC8|RIN2_ARATH E3 ubiquitin protein ligase RIN2 OS=Arabidopsis thaliana GN=RIN2
PE=1 SV=1
Length = 578
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 23 ECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
ECAIC E + R+ C+H+FH C+ WL++ L + +CP C
Sbjct: 336 ECAICREPMAKAK----RLHCNHLFHLGCLRSWLDQGLNEVYSCPTC 378
>sp|Q8WWF5|ZNRF4_HUMAN Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3
Length = 429
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 2 RELSRGACGEGQRSNHTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLG 61
R + C + Q T CAICL+ EY + + + CSH +H CI PW +
Sbjct: 287 RPVKTSTCQKAQVRTFTWHNDLCAICLD-EYEEGDQLKILPCSHTYHCKCIDPWFSQAPR 345
Query: 62 KSCACPVC 69
+S CPVC
Sbjct: 346 RS--CPVC 351
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
D+ CAICL+ EY D + + C+H +H+ C+ PWL + CP+C
Sbjct: 225 DQYDVCAICLD-EYEDGDKLRVLPCAHAYHSRCVDPWLTQ---TRKTCPIC 271
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 21 EAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMP 74
E +C +CL + +E+A I M C H+FH+ CI PW L K+ +CP+C +++P
Sbjct: 73 ELKCPVCLLEFEEEETA-IEMPCHHLFHSSCILPW----LSKTNSCPLCRYELP 121
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 22 AECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMP 74
ECAICL + +E+ + CSH FHA CI WL R CPVC +P
Sbjct: 126 VECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSR----STCPVCRASLP 174
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 23 ECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
EC++CL + +E I CSH+FH DCI WL+ + CP+C
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQ----NNANCPLC 179
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 5/47 (10%)
Query: 23 ECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
EC +C E +Y+ ++ ++ C+H+FH DCI PWLE+ CPVC
Sbjct: 227 ECPVCKE-DYTVGESVRQLPCNHLFHNDCIIPWLEQH----DTCPVC 268
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 23 ECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMPLP 76
ECA+CL + + + C H+FH DCI PW L + CP+C + P
Sbjct: 132 ECAVCLAEFADSDELRVLPACCHVFHPDCIDPW----LAAAVTCPLCRANLTAP 181
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 16 NHTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
+ + EC++CL + DE I C H+FH DCI WL+ + CP+C
Sbjct: 126 DQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQ----GNANCPLC 175
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 18 TDEEAECAICLEKEYSDESAMIR-MQCSHIFHADCITPWLEERLGKSCACPVCPFQ 72
T++E C++CLE+ E ++R + C H FHA CI PWL ++ CPVC F+
Sbjct: 205 TEDELTCSVCLEQVTVGE--IVRTLPCLHQFHAGCIDPWLRQQ----GTCPVCKFR 254
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 21 EAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMP 74
E +C +CL + +E+A I M C H+FH++CI PW L K+ +CP+C ++P
Sbjct: 73 ELKCPVCLLEFEEEETA-IEMPCHHLFHSNCILPW----LSKTNSCPLCRHELP 121
>sp|A8Y4B2|HRD1_CAEBR E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis briggsae
GN=sel-11 PE=3 SV=2
Length = 622
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 21 EAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
+A C IC E E + ES+ R+ CSH+FHA C+ W + + CP C
Sbjct: 289 DATCIICRE-EMTVESSPKRLPCSHVFHAHCLRSWFQ----RQQTCPTC 332
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 19 DEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMP 74
D +C +CL E+ + + ++ C H+FH+ CI PW LGK+ +CP+C ++P
Sbjct: 74 DAALKCPVCL-LEFEEGETVRQLPCEHLFHSSCILPW----LGKTNSCPLCRHELP 124
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Query: 17 HTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
H EC +C E +Y+ + ++ C+H+FH DCI PWLE+ CPVC
Sbjct: 221 HVGSGLECPVCKE-DYTVGECVRQLPCNHLFHNDCIIPWLEQH----DTCPVC 268
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 20 EEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
++ ECAICL + E+ + C+H+FH DCI WL CPVC
Sbjct: 120 KDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSH----ATCPVC 165
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 21 EAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
E EC +CL + DE+ + C H+FHADC+ WL S CP+C
Sbjct: 82 ELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSH----SSTCPIC 126
>sp|Q8SV35|Y733_ENCCU Uncharacterized RING finger protein ECU07_0330 OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU07_0330 PE=4 SV=1
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 14 RSNHTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
R+ D+ ECAIC+ ++ + + C H FH C+ WL LG S CPVC
Sbjct: 259 RAVEADKGCECAICMSNFIKNQRLRV-LPCDHRFHVGCVDKWL---LGHSNKCPVC 310
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 24 CAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQM 73
CA+C + E+ ++ C H +H DCI PW LG +CPVC FQ+
Sbjct: 257 CAVCKDGMVMGETGK-KLPCGHCYHGDCIVPW----LGTRNSCPVCRFQL 301
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 21 EAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVCPFQMP 74
E +C +CL + +E+ +I M C H+FH++CI PW L K+ +CP+C ++P
Sbjct: 85 ELKCPVCLLEFEEEET-VIEMPCHHLFHSNCILPW----LSKTNSCPLCRHELP 133
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 17 HTDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
H EC +C E +Y+ ++ ++ C+H+FH CI PWLE+ +CPVC
Sbjct: 224 HVGSGLECPVCKE-DYALGESVRQLPCNHLFHDSCIVPWLEQH----DSCPVC 271
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 18 TDEEAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
T E +CA+CL + D+ + CSH FH DCI WL L S CP+C
Sbjct: 138 TKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWL---LSNS-TCPLC 185
>sp|Q20798|HRD1_CAEEL E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis elegans
GN=sel-11 PE=3 SV=1
Length = 610
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 21 EAECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
+A C IC E+ D S R+ CSH+FHA C+ W + + CP C
Sbjct: 289 DATCIICREEMTVDASPK-RLPCSHVFHAHCLRSWFQ----RQQTCPTC 332
>sp|Q9C919|ATL19_ARATH Putative RING-H2 finger protein ATL19 OS=Arabidopsis thaliana
GN=ATL19 PE=3 SV=1
Length = 178
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 12 GQRSNHTDEEA-----ECAICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCAC 66
GQ ++ DEE ECAICL +E + C HI+HA CI WL+ L C
Sbjct: 113 GQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHL----TC 168
Query: 67 PVCPFQMP 74
P C +P
Sbjct: 169 PTCRKDLP 176
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 12 GQRSNHTDEEAEC-AICLEKEYSDESAMIRMQCSHIFHADCITPWLEERLGKSCACPVC 69
G+ S+ D +++C AIC+E Y + + C H FH +CI PWL E CP+C
Sbjct: 290 GKFSDEKDLDSDCCAICIEA-YKPTDTIRILPCKHEFHKNCIDPWLIEHR----TCPMC 343
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.130 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,839,704
Number of Sequences: 539616
Number of extensions: 1424727
Number of successful extensions: 3768
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 284
Number of HSP's that attempted gapping in prelim test: 3446
Number of HSP's gapped (non-prelim): 544
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)