Your job contains 1 sequence.
>034131
MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK
KMEKLNNIFFALMARGPDVDLSEVTGKEQMEAQPAKKGRGRKQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034131
(103 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2101288 - symbol:AT3G49100 "AT3G49100" species... 499 9.8e-48 1
ZFIN|ZDB-GENE-040426-1106 - symbol:srp9 "signal recogniti... 210 4.1e-17 1
DICTYBASE|DDB_G0267622 - symbol:srp9 "signal recognition ... 203 2.3e-16 1
UNIPROTKB|Q5ZHT7 - symbol:SRP9 "Signal recognition partic... 200 4.7e-16 1
WB|WBGene00013984 - symbol:ZK512.4 species:6239 "Caenorha... 187 1.1e-14 1
UNIPROTKB|P21262 - symbol:SRP9 "Signal recognition partic... 186 1.4e-14 1
UNIPROTKB|P49458 - symbol:SRP9 "Signal recognition partic... 186 1.4e-14 1
UNIPROTKB|F1Q0Z5 - symbol:SRP9 "Signal recognition partic... 184 2.3e-14 1
UNIPROTKB|F1S8R5 - symbol:SRP9 "Uncharacterized protein" ... 184 2.3e-14 1
MGI|MGI:1350930 - symbol:Srp9 "signal recognition particl... 184 2.3e-14 1
RGD|1597343 - symbol:Srp9 "signal recognition particle 9"... 184 2.3e-14 1
FB|FBgn0035827 - symbol:Srp9 "Signal recognition particle... 160 8.2e-12 1
GENEDB_PFALCIPARUM|MAL7P1.158 - symbol:MAL7P1.158 "signal... 140 1.1e-09 1
UNIPROTKB|C0H4Q0 - symbol:MAL7P1.158 "Signal recognition ... 140 1.1e-09 1
UNIPROTKB|E9PE20 - symbol:SRP9 "Signal recognition partic... 112 1.0e-06 1
POMBASE|SPAC17H9.07 - symbol:SPAC17H9.07 "signal recognit... 99 2.4e-05 1
>TAIR|locus:2101288 [details] [associations]
symbol:AT3G49100 "AT3G49100" species:3702 "Arabidopsis
thaliana" [GO:0005047 "signal recognition particle binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0045900 "negative regulation of translational elongation"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132967 GO:GO:0045900 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 EMBL:BT004743 EMBL:AY085335 IPI:IPI00544362
PIR:T46120 RefSeq:NP_190479.1 UniGene:At.35648
ProteinModelPortal:Q9SMU7 SMR:Q9SMU7 IntAct:Q9SMU7 STRING:Q9SMU7
PaxDb:Q9SMU7 PRIDE:Q9SMU7 EnsemblPlants:AT3G49100.1 GeneID:824071
KEGG:ath:AT3G49100 TAIR:At3g49100 eggNOG:NOG299259
HOGENOM:HOG000283871 InParanoid:Q9SMU7 KO:K03109 OMA:MRLMVSK
PhylomeDB:Q9SMU7 ProtClustDB:CLSN2684228 Genevestigator:Q9SMU7
GermOnline:AT3G49100 Gene3D:3.30.720.10 PANTHER:PTHR12834
SUPFAM:SSF54762 Uniprot:Q9SMU7
Length = 103
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 93/103 (90%), Positives = 98/103 (95%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60
MVY+ SWDEFV RSVQL++ADP+STRY MKYRHCDGKLVLKVTDNKECLKFKTDQAQ+AK
Sbjct: 1 MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAK 60
Query: 61 KMEKLNNIFFALMARGPDVDLSEVTGKEQMEAQPAKKGRGRKQ 103
KMEKLNNIFF LMARGPDVDLSEVTGKEQME QPAKKGRGRKQ
Sbjct: 61 KMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103
>ZFIN|ZDB-GENE-040426-1106 [details] [associations]
symbol:srp9 "signal recognition particle 9"
species:7955 "Danio rerio" [GO:0048500 "signal recognition
particle" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA] [GO:0045900 "negative regulation of
translational elongation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 ZFIN:ZDB-GENE-040426-1106 GO:GO:0045900
GO:GO:0008312 GO:GO:0006614 HSSP:P49458 GO:GO:0005786
eggNOG:NOG299259 HOGENOM:HOG000283871 KO:K03109 OMA:MRLMVSK
Gene3D:3.30.720.10 PANTHER:PTHR12834 SUPFAM:SSF54762
GeneTree:ENSGT00390000018505 HOVERGEN:HBG055306 OrthoDB:EOG44QT2H
CTD:6726 EMBL:BX255939 EMBL:BC049522 IPI:IPI00491891
RefSeq:NP_957390.1 UniGene:Dr.84122 SMR:Q7ZW94 STRING:Q7ZW94
Ensembl:ENSDART00000149171 GeneID:394071 KEGG:dre:394071
InParanoid:Q7ZW94 NextBio:20815028 Uniprot:Q7ZW94
Length = 86
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 38/73 (52%), Positives = 49/73 (67%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60
M Y +W+EF + +LY DP R +KYRHCDG L +KVTD+ CL++KTDQAQD K
Sbjct: 1 MPYYQTWEEFARAAEKLYLTDPMKVRVVLKYRHCDGNLCMKVTDDAVCLQYKTDQAQDVK 60
Query: 61 KMEKLNNIFFALM 73
K+EKL+ LM
Sbjct: 61 KVEKLHGKLMRLM 73
>DICTYBASE|DDB_G0267622 [details] [associations]
symbol:srp9 "signal recognition particle 9 kDa
subunit" species:44689 "Dictyostelium discoideum" [GO:0048500
"signal recognition particle" evidence=IEA] [GO:0045900 "negative
regulation of translational elongation" evidence=IEA] [GO:0008312
"7S RNA binding" evidence=IEA] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 dictyBase:DDB_G0267622 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0045900 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 eggNOG:NOG299259 KO:K03109 Gene3D:3.30.720.10
PANTHER:PTHR12834 SUPFAM:SSF54762 RefSeq:XP_647172.1 HSSP:P49962
ProteinModelPortal:Q55GL2 STRING:Q55GL2 EnsemblProtists:DDB0232378
GeneID:8615975 KEGG:ddi:DDB_G0267622 OMA:KSEQLYR
ProtClustDB:CLSZ2729350 Uniprot:Q55GL2
Length = 75
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 34/71 (47%), Positives = 54/71 (76%)
Query: 2 VYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKK 61
+Y+ WDEF +S QLY+ DP+ TR+ K+RH +GK+VLKVT++ LKF+TD+ D K+
Sbjct: 1 MYIEDWDEFYDKSEQLYRTDPKRTRFSFKFRHVEGKVVLKVTNDTVNLKFQTDKENDFKR 60
Query: 62 MEKLNNIFFAL 72
++++N++FF L
Sbjct: 61 IDQINSLFFRL 71
>UNIPROTKB|Q5ZHT7 [details] [associations]
symbol:SRP9 "Signal recognition particle 9 kDa protein"
species:9031 "Gallus gallus" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0045900 "negative
regulation of translational elongation" evidence=IEA] [GO:0005786
"signal recognition particle, endoplasmic reticulum targeting"
evidence=IEA] InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 GO:GO:0045900 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 eggNOG:NOG299259 HOGENOM:HOG000283871 KO:K03109
OMA:MRLMVSK Gene3D:3.30.720.10 PANTHER:PTHR12834 SUPFAM:SSF54762
GeneTree:ENSGT00390000018505 HOVERGEN:HBG055306 OrthoDB:EOG44QT2H
CTD:6726 EMBL:AADN02012174 EMBL:AJ721047 IPI:IPI00600049
RefSeq:NP_001091005.1 UniGene:Gga.22632 SMR:Q5ZHT7 STRING:Q5ZHT7
Ensembl:ENSGALT00000015122 GeneID:770243 KEGG:gga:770243
InParanoid:Q5ZHT7 NextBio:20920465 Uniprot:Q5ZHT7
Length = 86
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60
M + +W+EF + +LY ADP R +KYRHCDG L +KVTD+ CL ++TDQAQD K
Sbjct: 1 MPHYQAWEEFTRAAEKLYLADPMKVRVVLKYRHCDGNLCIKVTDDVACLLYRTDQAQDVK 60
Query: 61 KMEKLNNIFFALM 73
K+EK ++ LM
Sbjct: 61 KIEKFHSQLMRLM 73
>WB|WBGene00013984 [details] [associations]
symbol:ZK512.4 species:6239 "Caenorhabditis elegans"
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0045900 "negative regulation of translational elongation"
evidence=IEA] [GO:0048500 "signal recognition particle"
evidence=IEA] InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 EMBL:Z22177 GO:GO:0045900 GO:GO:0008312
GO:GO:0006614 GO:GO:0005786 eggNOG:NOG299259 HOGENOM:HOG000283871
KO:K03109 OMA:MRLMVSK Gene3D:3.30.720.10 PANTHER:PTHR12834
SUPFAM:SSF54762 PIR:S40765 RefSeq:NP_499026.1 UniGene:Cel.9555
ProteinModelPortal:P34642 SMR:P34642 IntAct:P34642 STRING:P34642
PaxDb:P34642 EnsemblMetazoa:ZK512.4 GeneID:176293
KEGG:cel:CELE_ZK512.4 UCSC:ZK512.4 CTD:176293 WormBase:ZK512.4
GeneTree:ENSGT00390000018505 InParanoid:P34642 NextBio:891960
Uniprot:P34642
Length = 76
Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60
M Y TSWDEF + +L+ A+P+ R+ KY H G+LVLK+TD+ CL++ T+Q QD K
Sbjct: 1 MTYFTSWDEFAKAAERLHSANPEKCRFVTKYNHTKGQLVLKLTDDVVCLQYSTNQLQDVK 60
Query: 61 KMEKLNN 67
K+EKL++
Sbjct: 61 KLEKLSS 67
>UNIPROTKB|P21262 [details] [associations]
symbol:SRP9 "Signal recognition particle 9 kDa protein"
species:9615 "Canis lupus familiaris" [GO:0005829 "cytosol"
evidence=TAS] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=IEA] [GO:0045900 "negative regulation
of translational elongation" evidence=IEA] [GO:0008312 "7S RNA
binding" evidence=IEA] [GO:0006614 "SRP-dependent cotranslational
protein targeting to membrane" evidence=IEA] Reactome:REACT_86357
InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 GO:GO:0005829 GO:GO:0045900 GO:GO:0008312
GO:GO:0006614 GO:GO:0005786 eggNOG:NOG299259 Gene3D:3.30.720.10
PANTHER:PTHR12834 SUPFAM:SSF54762 EMBL:M34952 PIR:A34731
ProteinModelPortal:P21262 SMR:P21262 STRING:P21262 PRIDE:P21262
HOVERGEN:HBG055306 InParanoid:P21262 OrthoDB:EOG44QT2H
Reactome:REACT_146484 Uniprot:P21262
Length = 86
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60
M +W+EF + +LY ADP R +KYRH DG L +KVTD+ CL ++TDQAQD K
Sbjct: 1 MAQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGSLCIKVTDDLVCLVYRTDQAQDVK 60
Query: 61 KMEKLNNIFFALM 73
K+EK ++ LM
Sbjct: 61 KIEKFHSQLMRLM 73
>UNIPROTKB|P49458 [details] [associations]
symbol:SRP9 "Signal recognition particle 9 kDa protein"
species:9606 "Homo sapiens" [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0045900 "negative regulation of translational
elongation" evidence=IEA] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=NAS] [GO:0005047 "signal
recognition particle binding" evidence=TAS] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0005785 "signal recognition particle
receptor complex" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_17015 InterPro:IPR008832 InterPro:IPR009018
Pfam:PF05486 PIRSF:PIRSF017029 GO:GO:0005829 GO:GO:0006412
EMBL:CH471066 GO:GO:0003723 EMBL:CH471098 TCDB:3.A.5.9.1
GO:GO:0045900 GO:GO:0008312 GO:GO:0006614 PDB:1RY1 PDBsum:1RY1
GO:GO:0005785 GO:GO:0005786 eggNOG:NOG299259 HOGENOM:HOG000283871
KO:K03109 OMA:MRLMVSK Gene3D:3.30.720.10 PANTHER:PTHR12834
SUPFAM:SSF54762 HOVERGEN:HBG055306 OrthoDB:EOG44QT2H CTD:6726
EMBL:U20998 EMBL:EF488978 EMBL:AK289595 EMBL:BC008443 EMBL:BC067845
EMBL:BC021995 EMBL:BC015094 EMBL:BC022415 EMBL:BC066957
IPI:IPI00216125 IPI:IPI00642816 PIR:A57292 RefSeq:NP_001123912.1
RefSeq:NP_003124.1 UniGene:Hs.511425 UniGene:Hs.706900 PDB:1E8O
PDB:1E8S PDBsum:1E8O PDBsum:1E8S ProteinModelPortal:P49458
SMR:P49458 DIP:DIP-6151N IntAct:P49458 MINT:MINT-151380
STRING:P49458 PhosphoSite:P49458 DMDM:1351111 PaxDb:P49458
PeptideAtlas:P49458 PRIDE:P49458 Ensembl:ENST00000304786
Ensembl:ENST00000366839 GeneID:6726 KEGG:hsa:6726 UCSC:uc001hpg.3
UCSC:uc001hph.3 GeneCards:GC01P225965 HGNC:HGNC:11304 MIM:600707
neXtProt:NX_P49458 PharmGKB:PA36128 InParanoid:P49458
PhylomeDB:P49458 ChiTaRS:SRP9 EvolutionaryTrace:P49458
GenomeRNAi:6726 NextBio:26236 ArrayExpress:P49458 Bgee:P49458
CleanEx:HS_SRP9 Genevestigator:P49458 GermOnline:ENSG00000143742
GO:GO:0005047 Uniprot:P49458
Length = 86
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 35/68 (51%), Positives = 46/68 (67%)
Query: 6 SWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKL 65
+W+EF + +LY ADP R +KYRH DG L +KVTD+ CL +KTDQAQD KK+EK
Sbjct: 6 TWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKF 65
Query: 66 NNIFFALM 73
++ LM
Sbjct: 66 HSQLMRLM 73
>UNIPROTKB|F1Q0Z5 [details] [associations]
symbol:SRP9 "Signal recognition particle 9 kDa protein"
species:9615 "Canis lupus familiaris" [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=IEA] [GO:0045900 "negative regulation of translational
elongation" evidence=IEA] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=IEA] InterPro:IPR008832
InterPro:IPR009018 Pfam:PF05486 PIRSF:PIRSF017029 GO:GO:0045900
GO:GO:0008312 GO:GO:0006614 GO:GO:0005786 KO:K03109 OMA:MRLMVSK
Gene3D:3.30.720.10 PANTHER:PTHR12834 SUPFAM:SSF54762
GeneTree:ENSGT00390000018505 CTD:6726 EMBL:AAEX03005281
RefSeq:XP_854739.1 ProteinModelPortal:F1Q0Z5
Ensembl:ENSCAFT00000025651 GeneID:611923 KEGG:cfa:611923
NextBio:20897458 Uniprot:F1Q0Z5
Length = 86
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 6 SWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKL 65
+W+EF + +LY ADP R +KYRH DG L +KVTD+ CL ++TDQAQD KK+EK
Sbjct: 6 TWEEFSRAAEKLYLADPMKARVVLKYRHSDGSLCIKVTDDLVCLVYRTDQAQDVKKIEKF 65
Query: 66 NNIFFALM 73
++ LM
Sbjct: 66 HSQLMRLM 73
>UNIPROTKB|F1S8R5 [details] [associations]
symbol:SRP9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048500 "signal recognition particle" evidence=IEA]
[GO:0045900 "negative regulation of translational elongation"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR008832 InterPro:IPR009018
Pfam:PF05486 PIRSF:PIRSF017029 GO:GO:0045900 GO:GO:0008312
GO:GO:0006614 KO:K03109 OMA:MRLMVSK Gene3D:3.30.720.10
PANTHER:PTHR12834 SUPFAM:SSF54762 GeneTree:ENSGT00390000018505
GO:GO:0048500 EMBL:CU694604 RefSeq:XP_003130588.1
ProteinModelPortal:F1S8R5 Ensembl:ENSSSCT00000023066
GeneID:100524270 KEGG:ssc:100524270 Uniprot:F1S8R5
Length = 86
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 6 SWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKL 65
+W+EF + +LY ADP R +KYRH DG L +KVTD+ CL ++TDQAQD KK+EK
Sbjct: 6 TWEEFSRAAEKLYLADPMKARVVLKYRHSDGSLCIKVTDDLVCLVYRTDQAQDVKKIEKF 65
Query: 66 NNIFFALM 73
++ LM
Sbjct: 66 HSQLMRLM 73
>MGI|MGI:1350930 [details] [associations]
symbol:Srp9 "signal recognition particle 9" species:10090
"Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0045900
"negative regulation of translational elongation" evidence=IEA]
[GO:0048500 "signal recognition particle" evidence=IEA]
InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 MGI:MGI:1350930 GO:GO:0045900 GO:GO:0008312
GO:GO:0006614 GO:GO:0005786 eggNOG:NOG299259 HOGENOM:HOG000283871
KO:K03109 OMA:MRLMVSK Gene3D:3.30.720.10 PANTHER:PTHR12834
SUPFAM:SSF54762 HOVERGEN:HBG055306 OrthoDB:EOG44QT2H CTD:6726
EMBL:X78304 EMBL:AK011720 EMBL:AK020583 EMBL:AK020620 EMBL:BC039648
IPI:IPI00230420 PIR:S57500 RefSeq:NP_036188.1 UniGene:Mm.303071
PDB:1914 PDBsum:1914 ProteinModelPortal:P49962 SMR:P49962
STRING:P49962 PhosphoSite:P49962 PaxDb:P49962 PRIDE:P49962
Ensembl:ENSMUST00000027792 GeneID:27058 KEGG:mmu:27058
InParanoid:P49962 EvolutionaryTrace:P49962 NextBio:305013
Bgee:P49962 CleanEx:MM_SRP9 Genevestigator:P49962
GermOnline:ENSMUSG00000026511 GermOnline:ENSMUSG00000033259
Uniprot:P49962
Length = 86
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 6 SWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKL 65
+W+EF + +LY ADP R +KYRH DG L +KVTD+ CL ++TDQAQD KK+EK
Sbjct: 6 TWEEFSRAAEKLYLADPMKVRVVLKYRHVDGNLCIKVTDDLVCLVYRTDQAQDVKKIEKF 65
Query: 66 NNIFFALM 73
++ LM
Sbjct: 66 HSQLMRLM 73
>RGD|1597343 [details] [associations]
symbol:Srp9 "signal recognition particle 9" species:10116
"Rattus norvegicus" [GO:0005786 "signal recognition particle,
endoplasmic reticulum targeting" evidence=IEA] [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=IEA] [GO:0008312 "7S RNA binding" evidence=IEA]
[GO:0045900 "negative regulation of translational elongation"
evidence=IEA] InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 RGD:1597343 GO:GO:0045900 GO:GO:0008312
GO:GO:0006614 EMBL:CH473985 GO:GO:0005786 KO:K03109 OMA:MRLMVSK
Gene3D:3.30.720.10 PANTHER:PTHR12834 SUPFAM:SSF54762
GeneTree:ENSGT00390000018505 OrthoDB:EOG44QT2H CTD:6726
IPI:IPI00199019 RefSeq:NP_001119567.1 UniGene:Rn.7477
Ensembl:ENSRNOT00000004297 GeneID:690345 KEGG:rno:690345
UCSC:RGD:1597343 NextBio:740707 Uniprot:D4A511
Length = 86
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 6 SWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKL 65
+W+EF + +LY ADP R +KYRH DG L +KVTD+ CL ++TDQAQD KK+EK
Sbjct: 6 TWEEFSRAAEKLYLADPMKVRVVLKYRHVDGNLCIKVTDDLVCLVYRTDQAQDVKKIEKF 65
Query: 66 NNIFFALM 73
++ LM
Sbjct: 66 HSQLMRLM 73
>FB|FBgn0035827 [details] [associations]
symbol:Srp9 "Signal recognition particle protein 9"
species:7227 "Drosophila melanogaster" [GO:0008312 "7S RNA binding"
evidence=ISS] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=ISS] [GO:0005786 "signal
recognition particle, endoplasmic reticulum targeting"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0045900
"negative regulation of translational elongation" evidence=IEA]
InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
PIRSF:PIRSF017029 EMBL:AE014296 GO:GO:0045900 GO:GO:0008312
GO:GO:0006614 GO:GO:0005786 eggNOG:NOG299259 KO:K03109 OMA:MRLMVSK
Gene3D:3.30.720.10 PANTHER:PTHR12834 SUPFAM:SSF54762
GeneTree:ENSGT00390000018505 EMBL:AY071180 RefSeq:NP_648163.1
UniGene:Dm.6073 ProteinModelPortal:Q9VSC1 SMR:Q9VSC1 DIP:DIP-18881N
IntAct:Q9VSC1 MINT:MINT-848618 STRING:Q9VSC1 PaxDb:Q9VSC1
PRIDE:Q9VSC1 EnsemblMetazoa:FBtr0076750 GeneID:38883
KEGG:dme:Dmel_CG8268 UCSC:CG8268-RA CTD:6726 FlyBase:FBgn0035827
InParanoid:Q9VSC1 OrthoDB:EOG459ZZ8 PhylomeDB:Q9VSC1
GenomeRNAi:38883 NextBio:810839 Bgee:Q9VSC1 GermOnline:CG8268
Uniprot:Q9VSC1
Length = 77
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 29/74 (39%), Positives = 47/74 (63%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60
MV+V +WD+F +Y A+PQ+ R MKY H G ++LK+TDN +C+++K + D +
Sbjct: 1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLR 60
Query: 61 KMEKLNNIFFALMA 74
K+EK+ + MA
Sbjct: 61 KIEKITSNLVGHMA 74
>GENEDB_PFALCIPARUM|MAL7P1.158 [details] [associations]
symbol:MAL7P1.158 "signal recognition
particle, putative" species:5833 "Plasmodium falciparum"
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=ISS] InterPro:IPR008832 InterPro:IPR009018
Pfam:PF05486 EMBL:AL844506 GO:GO:0045900 GO:GO:0008312
GO:GO:0006614 HOGENOM:HOG000283871 KO:K03109 Gene3D:3.30.720.10
PANTHER:PTHR12834 SUPFAM:SSF54762 GO:GO:0048500
RefSeq:XP_002808797.1 ProteinModelPortal:C0H4Q0
EnsemblProtists:MAL7P1.158:mRNA GeneID:2655034 KEGG:pfa:MAL7P1.158
EuPathDB:PlasmoDB:PF3D7_0729000 ProtClustDB:CLSZ2734115
Uniprot:C0H4Q0
Length = 103
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/102 (29%), Positives = 56/102 (54%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60
MVY SW++F+ + + P TRY +K +++KVTDN + +K D+ + K
Sbjct: 1 MVYAESWNDFIHTTRNIISKSPDKTRYVIKLHRPSETIIVKVTDNNNSIMYKLDKNDNMK 60
Query: 61 KMEKLNNIFFAL-MARGPD----VDLSEVTGKEQMEAQPAKK 97
K+E+LN++F + P+ + ++++T K ++ Q KK
Sbjct: 61 KIEELNSLFLMWGTSENPNEPFPLKMNKITDKGTID-QKMKK 101
>UNIPROTKB|C0H4Q0 [details] [associations]
symbol:MAL7P1.158 "Signal recognition particle SRP9,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006614
"SRP-dependent cotranslational protein targeting to membrane"
evidence=ISS] InterPro:IPR008832 InterPro:IPR009018 Pfam:PF05486
EMBL:AL844506 GO:GO:0045900 GO:GO:0008312 GO:GO:0006614
HOGENOM:HOG000283871 KO:K03109 Gene3D:3.30.720.10 PANTHER:PTHR12834
SUPFAM:SSF54762 GO:GO:0048500 RefSeq:XP_002808797.1
ProteinModelPortal:C0H4Q0 EnsemblProtists:MAL7P1.158:mRNA
GeneID:2655034 KEGG:pfa:MAL7P1.158 EuPathDB:PlasmoDB:PF3D7_0729000
ProtClustDB:CLSZ2734115 Uniprot:C0H4Q0
Length = 103
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/102 (29%), Positives = 56/102 (54%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAK 60
MVY SW++F+ + + P TRY +K +++KVTDN + +K D+ + K
Sbjct: 1 MVYAESWNDFIHTTRNIISKSPDKTRYVIKLHRPSETIIVKVTDNNNSIMYKLDKNDNMK 60
Query: 61 KMEKLNNIFFAL-MARGPD----VDLSEVTGKEQMEAQPAKK 97
K+E+LN++F + P+ + ++++T K ++ Q KK
Sbjct: 61 KIEELNSLFLMWGTSENPNEPFPLKMNKITDKGTID-QKMKK 101
>UNIPROTKB|E9PE20 [details] [associations]
symbol:SRP9 "Signal recognition particle 9 kDa protein"
species:9606 "Homo sapiens" [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=IEA]
[GO:0008312 "7S RNA binding" evidence=IEA] [GO:0045900 "negative
regulation of translational elongation" evidence=IEA] [GO:0048500
"signal recognition particle" evidence=IEA] InterPro:IPR008832
InterPro:IPR009018 Pfam:PF05486 GO:GO:0045900 GO:GO:0008312
GO:GO:0006614 Gene3D:3.30.720.10 PANTHER:PTHR12834 SUPFAM:SSF54762
HGNC:HGNC:11304 ChiTaRS:SRP9 GO:GO:0048500 EMBL:AC099066
IPI:IPI00419797 ProteinModelPortal:E9PE20 SMR:E9PE20 PRIDE:E9PE20
Ensembl:ENST00000366838 ArrayExpress:E9PE20 Bgee:E9PE20
Uniprot:E9PE20
Length = 66
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 6 SWDEFVGRSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDN 45
+W+EF + +LY ADP R +KYRH DG L +KVTD+
Sbjct: 6 TWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDD 45
>POMBASE|SPAC17H9.07 [details] [associations]
symbol:SPAC17H9.07 "signal recognition particle subunit
Srp21 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005786 "signal recognition particle, endoplasmic
reticulum targeting" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006614 "SRP-dependent cotranslational protein
targeting to membrane" evidence=ISO] [GO:0008312 "7S RNA binding"
evidence=IEA] [GO:0045900 "negative regulation of translational
elongation" evidence=IEA] InterPro:IPR008832 InterPro:IPR009018
Pfam:PF05486 PomBase:SPAC17H9.07 GO:GO:0005829 EMBL:CU329670
GO:GO:0005730 GO:GO:0045900 GO:GO:0008312 GO:GO:0006614
GO:GO:0005786 Gene3D:3.30.720.10 OrthoDB:EOG486CP8 PIR:T37873
RefSeq:NP_593577.1 PRIDE:O13804 EnsemblFungi:SPAC17H9.07.1
GeneID:2542449 KEGG:spo:SPAC17H9.07 eggNOG:NOG308100
NextBio:20803505 Uniprot:O13804
Length = 120
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 1 MVYVTSWDEFVGRSVQLYKADPQSTRYCMKYR---HCDGKLVLKVTDNKE--CLKFKTDQ 55
MVY+ + +EF +S L +A P++T+ +KYR L+ K ++ CLK++TD+
Sbjct: 1 MVYLQTVNEFFTQSKSLTEAYPKTTKLSIKYRTNEQSQNYLIAKAFESASGICLKYRTDK 60
Query: 56 AQDAKKMEKLNNIFFALMARG---PDVDLSEVTGK---EQMEAQPAKKGRGRKQ 103
A + ++ + N + ++ G P EV EQ +A+P+ +G K+
Sbjct: 61 AAELGRLLLIANKL-SYVSTGNEIPPEPEQEVVASPVTEQKKAEPSAPPKGSKK 113
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 103 103 0.00091 102 3 11 22 0.41 30
29 0.49 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 580 (62 KB)
Total size of DFA: 123 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.86u 0.10s 10.96t Elapsed: 00:00:00
Total cpu time: 10.87u 0.10s 10.97t Elapsed: 00:00:00
Start: Fri May 10 15:35:05 2013 End: Fri May 10 15:35:05 2013