BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034136
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q838N8|PCP_ENTFA Pyrrolidone-carboxylate peptidase OS=Enterococcus faecalis (strain
ATCC 700802 / V583) GN=pcp PE=3 SV=1
Length = 213
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
+PT+ T +++ ++ + I VG G +E+ A+N A PD G QP
Sbjct: 40 VPTVFGTSGEKVAEAIETHQPDMVICVGQAGGRETVTVEKVAINLAEARIPDNAGQQPSD 99
Query: 87 IPVVLEDGGIS 97
+P+V EDG +
Sbjct: 100 VPLV-EDGATA 109
>sp|O73944|PCP_PYRFU Pyrrolidone-carboxylate peptidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pcp PE=1 SV=1
Length = 208
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 10 GVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAV 69
G+ +G V LP + + + +T + I IHVG+ G S ++ER AV
Sbjct: 28 GIKIGDAQVF----GRVLPVVFGKAKEVLEKTLEEIKPDIAIHVGLAPGRSAISIERIAV 83
Query: 70 NEATFLCPDQLGWQPQQIPVV 90
N PD G + + P+V
Sbjct: 84 NAIDARIPDNEGKKIEDEPIV 104
>sp|P21614|VTDB_MOUSE Vitamin D-binding protein OS=Mus musculus GN=Gc PE=1 SV=2
Length = 476
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 20 EAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQ 79
E +GA PT T S +S + ++ +H G +K LER+ LC
Sbjct: 73 ECCAEGADPTCYDTRTSELSVKSCESDAPFPVHPGTPECCTKEGLERK-------LCMAA 125
Query: 80 LGWQPQQIPVVLE 92
L QPQ+ P +E
Sbjct: 126 LSHQPQEFPTYVE 138
>sp|A7GQB6|PCP_BACCN Pyrrolidone-carboxylate peptidase OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=pcp PE=3 SV=1
Length = 215
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 27 LPTLL-KTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQ 85
+PT+ K++E S + N ++I I +G G + +ER A+N PD +QP
Sbjct: 42 IPTVFHKSIEQLESYIDEFNPELI-ICIGQAGGRADITVERVAINVDDARIPDNENYQPI 100
Query: 86 QIPVVLEDGGIS 97
+P++ EDG ++
Sbjct: 101 DVPII-EDGPVA 111
>sp|Q8XT56|PCP2_RALSO Pyrrolidone-carboxylate peptidase 2 OS=Ralstonia solanacearum
(strain GMI1000) GN=pcp2 PE=3 SV=1
Length = 215
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 53 VGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLE 92
+G+ SG S+ ++ER A+N PD G QP +PVV +
Sbjct: 68 LGLASGRSELSVERVAINVIDARIPDNAGNQPVDVPVVAD 107
>sp|P04276|VTDB_RAT Vitamin D-binding protein OS=Rattus norvegicus GN=Gc PE=1 SV=3
Length = 476
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Query: 20 EAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQ 79
E +GA P T S +S + ++ +H G + +K LER+ LC
Sbjct: 73 ECCAEGADPNCYDTRTSELSIKSCESDAPFPVHPGTSECCTKEGLERK-------LCMAA 125
Query: 80 LGWQPQQIPVVLE 92
L QPQ+ P +E
Sbjct: 126 LSHQPQEFPAYVE 138
>sp|A7N3R7|PCP_VIBHB Pyrrolidone-carboxylate peptidase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=pcp PE=3 SV=1
Length = 212
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 31 LKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVV 90
+ T+ ++I Q + I I VG +G + ER A+N F PD G QP PV+
Sbjct: 50 IDTVVNAIEQYQPD----IVITVGQAAGRAAITPERVAINVDDFRIPDNGGHQPIDEPVI 105
Query: 91 LE 92
L+
Sbjct: 106 LD 107
>sp|A5CM68|PCP_CLAM3 Pyrrolidone-carboxylate peptidase OS=Clavibacter michiganensis
subsp. michiganensis (strain NCPPB 382) GN=pcp PE=3 SV=1
Length = 213
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++ ++ + + I VG+ G +ER A+N PD G+QP
Sbjct: 42 LPVDFAKVDDALRAALAEVDPDVVISVGLAGGIETLEVERVAINVDDARIPDNTGFQPID 101
Query: 87 IPVVLEDGG 95
PVV DGG
Sbjct: 102 EPVV--DGG 108
>sp|O58321|PCP_PYRHO Pyrrolidone-carboxylate peptidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pcp PE=1 SV=1
Length = 206
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP K + + + I I++G+ G + ++ER AVN PD G QP+
Sbjct: 38 LPVSFKRAREKLLKVLDDVRPDITINLGLAPGRTHISVERVAVNMIDARIPDNDGEQPKD 97
Query: 87 IPVV 90
P+V
Sbjct: 98 EPIV 101
>sp|Q03P20|PCP_LACBA Pyrrolidone-carboxylate peptidase OS=Lactobacillus brevis (strain
ATCC 367 / JCM 1170) GN=pcp PE=3 SV=1
Length = 204
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 6/83 (7%)
Query: 7 LPAGVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALER 66
LPA + + LE +PT+ T + Q + + VG G S ER
Sbjct: 26 LPAAIAGATVVPLE------IPTVFGTCAEVVRQAIITERPDVVLSVGQAGGRSALTPER 79
Query: 67 RAVNEATFLCPDQLGWQPQQIPV 89
A+N PD G+QP P+
Sbjct: 80 IAINLDDGRIPDNAGFQPVDQPI 102
>sp|Q2YZA2|PCP_STAAB Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=pcp PE=3 SV=1
Length = 212
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++ +N I + +G G S ER A+N PD +QP
Sbjct: 40 LPTSFKKVDTMINKALASNHYDIVLSIGQAGGRSAITPERVAINIDDARIPDNDDFQP 97
>sp|Q53596|PCP_STAAU Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus GN=pcp
PE=3 SV=1
Length = 212
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDTIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|Q6GDB4|PCP_STAAR Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain MRSA252) GN=pcp PE=3 SV=1
Length = 212
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDTIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|P65677|PCP_STAAN Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain N315) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|P65676|PCP_STAAM Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|A5IWB7|PCP_STAA9 Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain JH9) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|A6U575|PCP_STAA2 Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain JH1) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|A7X782|PCP_STAA1 Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain Mu3 / ATCC 700698) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|P02774|VTDB_HUMAN Vitamin D-binding protein OS=Homo sapiens GN=GC PE=1 SV=1
Length = 474
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 23 GDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGW 82
+GA P T S++S + + +H G +K LER+ LC L
Sbjct: 76 AEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAECCTKEGLERK-------LCMAALKH 128
Query: 83 QPQQIPVVLE 92
QPQ+ P +E
Sbjct: 129 QPQEFPTYVE 138
>sp|Q8NUH2|PCP_STAAW Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain MW2) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|A8Z5J1|PCP_STAAT Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain USA300 / TCH1516) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|Q6G5Y4|PCP_STAAS Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain MSSA476) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|A6QKH8|PCP_STAAE Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain Newman) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|Q5HCK7|PCP_STAAC Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain COL) GN=pcp PE=1 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|Q2FUS6|PCP_STAA8 Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain NCTC 8325) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|Q2FDH1|PCP_STAA3 Pyrrolidone-carboxylate peptidase OS=Staphylococcus aureus
(strain USA300) GN=pcp PE=3 SV=1
Length = 212
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LPT K +++ I++T +N + + +G G + ER A+N PD +QP
Sbjct: 40 LPTSFKKVDNIINKTLASNHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQP 97
>sp|P28618|PCP_BACSU Pyrrolidone-carboxylate peptidase OS=Bacillus subtilis (strain 168)
GN=pcp PE=1 SV=1
Length = 215
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
+PT+ ++ ++ Q ++ I I VG G + ER A+N A PD G QP
Sbjct: 43 IPTVFRSALDTLRQAIQKHQPDIVICVGQAGGRMQITPERVAINLADARIPDNEGHQP 100
>sp|Q667T6|PCP_YERPS Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=pcp PE=3 SV=1
Length = 215
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|A4TKZ3|PCP_YERPP Pyrrolidone-carboxylate peptidase OS=Yersinia pestis (strain
Pestoides F) GN=pcp PE=3 SV=1
Length = 215
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|Q1CKF9|PCP_YERPN Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=pcp PE=3 SV=1
Length = 215
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|A9R3Y5|PCP_YERPG Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=pcp PE=3 SV=1
Length = 215
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|Q8ZD86|PCP_YERPE Pyrrolidone-carboxylate peptidase OS=Yersinia pestis GN=pcp PE=3
SV=1
Length = 215
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|B2KA64|PCP_YERPB Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=pcp PE=3 SV=1
Length = 215
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|Q1C571|PCP_YERPA Pyrrolidone-carboxylate peptidase OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=pcp PE=3 SV=1
Length = 215
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|A7FFS3|PCP_YERP3 Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=pcp PE=3 SV=1
Length = 215
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|B1JRB0|PCP_YERPY Pyrrolidone-carboxylate peptidase OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=pcp PE=3 SV=1
Length = 215
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQ 86
LP ++++ + + V+ + +G G + +ER A+N PD LG QP
Sbjct: 42 LPCAFGEALTALNTAIDDVQPVLVLAIGQAGGRADITIERVAINVDDARIPDNLGNQPVD 101
Query: 87 IPVVLE 92
P++ E
Sbjct: 102 QPIIQE 107
>sp|C3JZR3|PCP_PSEFS Pyrrolidone-carboxylate peptidase OS=Pseudomonas fluorescens
(strain SBW25) GN=pcp PE=3 SV=1
Length = 213
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 27 LPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQP 84
LP T + ++Q + I G+ G S ++ER A+N PD LG QP
Sbjct: 43 LPCAFATAGARLAQLIDELHPEMVIATGLGPGRSDISIERVAINVNDARIPDNLGEQP 100
>sp|P42673|PCP_PSEFL Pyrrolidone-carboxylate peptidase OS=Pseudomonas fluorescens GN=pcp
PE=3 SV=1
Length = 213
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 10 GVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAV 69
GV LGS + A LP T +++ + I G+ G S ++ER A+
Sbjct: 29 GVQLGSDVKIVAR---RLPCAFATAGECLTRLIDELHPAMVIATGLGPGRSDISVERVAI 85
Query: 70 NEATFLCPDQLGWQPQQIPVVLE 92
N PD LG QP VV +
Sbjct: 86 NINDARIPDNLGEQPIDTAVVAD 108
>sp|Q8RBX8|PCP1_THETN Pyrrolidone-carboxylate peptidase 1 OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=pcp1 PE=3 SV=1
Length = 203
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 33 TLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPV 89
++E +I + N + + +G G ++ER A+N PD +G QP IP+
Sbjct: 47 SVEKAIEKIKEVNPDAV-LSIGQAGGRYDISVERVAINIDDARIPDNMGQQPIDIPI 102
>sp|Q54JS5|WDR24_DICDI WD repeat-containing protein 24 homolog OS=Dictyostelium discoideum
GN=wdr24 PE=3 SV=1
Length = 1023
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Query: 28 PTLLKTLESSISQTNTNNEQVIW--IHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQ 85
P+LL+ I+ TN VIW + G S F RAVN +L W P+
Sbjct: 76 PSLLENYRFLIATAATNGAVVIWNTVREGSKSVERVFTDHSRAVN--------KLAWHPE 127
Query: 86 QIPVVL 91
++ +L
Sbjct: 128 KLDCIL 133
>sp|D4ABP9|FBX3_RAT F-box only protein 3 OS=Rattus norvegicus GN=Fbxo3 PE=3 SV=1
Length = 480
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 51 IHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQI 87
IH G++ + A E R NE + CPDQ+ P I
Sbjct: 200 IHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAI 236
>sp|Q9DC63|FBX3_MOUSE F-box only protein 3 OS=Mus musculus GN=Fbxo3 PE=2 SV=1
Length = 480
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 51 IHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQI 87
IH G++ + A E R NE + CPDQ+ P I
Sbjct: 200 IHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAI 236
>sp|Q9UK99|FBX3_HUMAN F-box only protein 3 OS=Homo sapiens GN=FBXO3 PE=1 SV=3
Length = 471
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 51 IHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQI 87
IH G++ + A E R NE + CPDQ+ P I
Sbjct: 200 IHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAI 236
>sp|A6H7H7|FBX3_BOVIN F-box only protein 3 OS=Bos taurus GN=FBXO3 PE=2 SV=1
Length = 469
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 51 IHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQI 87
IH G++ + A E R NE + CPDQ+ P I
Sbjct: 200 IHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAI 236
>sp|Q7U3S5|COAE_SYNPX Dephospho-CoA kinase OS=Synechococcus sp. (strain WH8102) GN=coaE
PE=3 SV=1
Length = 198
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 1 MLKEEGLPAGVTLGSCTV---LEAAGDGALPTL-LKTLESSISQTNTNNEQVIWIHVGVN 56
M + GL G+ G +V LEA G P L NT Q + H G
Sbjct: 1 MQRRIGLTGGIASGKSSVGRLLEARG---WPVLDADQYARDALAPNTAASQAVAHHFGAA 57
Query: 57 SGSSKFALERRAVNEATFLCPDQLGWQPQQI-PVVLE 92
G++ L+R+A+ F PDQ W I PVV E
Sbjct: 58 VGTAA-DLDRKALGRIVFSDPDQRRWLEALIHPVVRE 93
>sp|B7LKQ5|PCP_ESCF3 Pyrrolidone-carboxylate peptidase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=pcp PE=3 SV=1
Length = 214
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 13 LGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEA 72
LG C V+ L L S+I + + + + VG G + +ER A+N
Sbjct: 32 LGGCRVVARQLPCVFGESLAVLNSAIDALSPS----VVLAVGQAGGRTDITVERVAINVD 87
Query: 73 TFLCPDQLGWQPQQIPVV 90
PD G QP +PV+
Sbjct: 88 DARIPDNRGNQPVDVPVI 105
>sp|B5Y5X6|PCP_COPPD Pyrrolidone-carboxylate peptidase OS=Coprothermobacter
proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=pcp
PE=3 SV=1
Length = 207
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 25 GALPTL-LKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQ 83
G LP + +K ++ ++ E V ++VG G + ++E+ A+N + PD G Q
Sbjct: 40 GVLPVVTVKCIDEAVKLIE-KYEPVAVLNVGQAGGRVELSIEKVAINVKDYRIPDNEGNQ 98
Query: 84 PQQIPVVLEDGG 95
+ PVV +GG
Sbjct: 99 IRYAPVV--EGG 108
>sp|Q74JY4|MURG_LACJO UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=murG PE=3 SV=1
Length = 370
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Query: 17 TVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLC 76
TVL G + + +E S+S+ T QVIW + G K L + VN +
Sbjct: 193 TVLIFGGSRGALAINQIVEKSLSELETKPYQVIWATGQLYYGDVKKKLAGKEVNSNIKIV 252
Query: 77 P---DQLGWQPQQIPVVLEDGGIS 97
P + G PQ VV G S
Sbjct: 253 PYIDNMPGLLPQMTCVVARSGATS 276
>sp|B5XZE0|PCP_KLEP3 Pyrrolidone-carboxylate peptidase OS=Klebsiella pneumoniae (strain
342) GN=pcp PE=3 SV=1
Length = 214
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 51 IHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLEDGG 95
I VG G ++ER A+N PD G QP P+V DGG
Sbjct: 66 IAVGQAGGRVDISVERVAINVDDARIPDNKGQQPVDTPIV--DGG 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,420,083
Number of Sequences: 539616
Number of extensions: 1283167
Number of successful extensions: 2395
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 2356
Number of HSP's gapped (non-prelim): 60
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)