Query 034136
Match_columns 103
No_of_seqs 120 out of 261
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 17:19:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034136.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034136hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ebj_A Pyrrolidone carboxyl pe 99.9 1E-21 3.6E-26 146.6 8.3 79 10-98 31-109 (192)
2 4gxh_A Pyrrolidone-carboxylate 99.8 2.1E-21 7.3E-26 147.3 7.8 81 10-99 35-115 (216)
3 1x10_A Pyrrolidone-carboxylate 99.8 3.1E-21 1.1E-25 145.4 7.7 80 10-98 33-112 (208)
4 3ro0_A Pyrrolidone-carboxylate 99.8 3.3E-21 1.1E-25 147.2 7.7 76 15-98 39-114 (223)
5 1iu8_A Pyrrolidone-carboxylate 99.8 2.3E-21 7.9E-26 146.0 6.7 76 15-98 34-109 (206)
6 3lac_A Pyrrolidone-carboxylate 99.8 3.8E-21 1.3E-25 145.8 7.7 77 14-98 37-113 (215)
7 3giu_A Pyrrolidone-carboxylate 99.8 4.2E-21 1.4E-25 145.7 7.4 76 15-98 39-114 (215)
8 1a2z_A Pyrrolidone carboxyl pe 99.8 4.7E-21 1.6E-25 145.8 7.3 80 10-98 34-113 (220)
9 4hps_A Pyrrolidone-carboxylate 99.8 5.4E-21 1.8E-25 146.5 7.2 76 15-98 60-135 (228)
10 4ds3_A Phosphoribosylglycinami 24.7 31 0.0011 25.2 1.7 50 45-94 85-137 (209)
11 1meo_A Phosophoribosylglycinam 23.9 39 0.0013 24.5 2.0 50 45-94 78-130 (209)
12 3tqr_A Phosphoribosylglycinami 21.3 41 0.0014 24.6 1.7 51 44-94 81-134 (215)
13 3kcq_A Phosphoribosylglycinami 20.9 43 0.0015 24.5 1.7 59 28-94 72-133 (215)
14 2ywr_A Phosphoribosylglycinami 20.8 53 0.0018 23.7 2.2 50 45-94 79-131 (216)
No 1
>2ebj_A Pyrrolidone carboxyl peptidase; TTHA08 degradation of proteins and peptides, structural genomics; 1.90A {Thermus thermophilus}
Probab=99.85 E-value=1e-21 Score=146.59 Aligned_cols=79 Identities=28% Similarity=0.335 Sum_probs=70.9
Q ss_pred ceeeeeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceecee
Q 034136 10 GVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPV 89 (103)
Q Consensus 10 ~~~l~~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI 89 (103)
+..+.. ..|+|+ +.+.+.|.+++++ .+||+|||+|+|+||+.|++||+|+|++|||+|||+|++|.++||
T Consensus 31 ~~~i~~-~~lPv~-~~~~~~l~~~~~~--------~~pd~vi~~G~a~~r~~i~~Er~A~N~~~~~~pDn~G~~p~~~~i 100 (192)
T 2ebj_A 31 GKPLRK-AVLPVD-AEALGEALEDLHR--------EGPKAVLHLGLAEDRPVLTLERLAVNLLDFPRPDNRGRVLEDLPI 100 (192)
T ss_dssp TEEEEE-EEECSC-HHHHHHHHHHHHT--------TCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTCCCCCSBCS
T ss_pred CcEEEE-EEeccc-ccHHHHHHHHHHH--------hCCCEEEEeccCCCCceEEeEEEEEcCCCccCCCCCCCCCCCCce
Confidence 555544 459999 9999999888866 789999999999999999999999999999999999999999999
Q ss_pred ecCCCceee
Q 034136 90 VLEDGGISR 98 (103)
Q Consensus 90 ~~~gp~~~~ 98 (103)
+++||..-+
T Consensus 101 ~~~gp~~~~ 109 (192)
T 2ebj_A 101 VPGGPLALP 109 (192)
T ss_dssp STTSCSEEE
T ss_pred eCCCCceeE
Confidence 999987544
No 2
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=99.84 E-value=2.1e-21 Score=147.26 Aligned_cols=81 Identities=25% Similarity=0.363 Sum_probs=73.3
Q ss_pred ceeeeeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceecee
Q 034136 10 GVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPV 89 (103)
Q Consensus 10 ~~~l~~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI 89 (103)
+..+ ....|+|+++.+.+.|.++|++ .+||+|||+|+|+||+.|++||+|+|.+|||+|||+|++|.++||
T Consensus 35 ~~~i-~~~~lPv~~~~~~~~l~~~i~~--------~~Pd~vi~~G~a~gr~~i~~Er~A~N~~~~r~pDn~G~~p~~~~i 105 (216)
T 4gxh_A 35 GANI-EICQIPCIFDTSLEHLYAAVDK--------YQPELVISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPV 105 (216)
T ss_dssp TEEE-EEEEECSSTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCCSBCS
T ss_pred CceE-EEEecCccHHHHHHHHHHHHHh--------hCCCEEEEeccCCCCCcceeEEEEcccCcccCCccCCCCCCCCcc
Confidence 3444 3567999999999999999977 789999999999999999999999999999999999999999999
Q ss_pred ecCCCceeee
Q 034136 90 VLEDGGISRS 99 (103)
Q Consensus 90 ~~~gp~~~~~ 99 (103)
+++||..-+.
T Consensus 106 ~~~gp~~~~t 115 (216)
T 4gxh_A 106 IVDGPAAYFS 115 (216)
T ss_dssp STTCCSEEEC
T ss_pred cCCCchheec
Confidence 9999987553
No 3
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=99.84 E-value=3.1e-21 Score=145.36 Aligned_cols=80 Identities=31% Similarity=0.268 Sum_probs=72.3
Q ss_pred ceeeeeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceecee
Q 034136 10 GVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPV 89 (103)
Q Consensus 10 ~~~l~~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI 89 (103)
+..+. ...|+|+++.+.+.|.+++++ .+||+|||+|+|+||+.|++||+|+|+.|||+|||+|++|.++||
T Consensus 33 ~~~i~-~~~lPv~~~~~~~~l~~~~~~--------~~pd~vi~vG~a~gr~~i~iEr~A~N~~~~~~pDn~G~~p~~~~i 103 (208)
T 1x10_A 33 DAQVF-GRVLPVVFGKAKEVLEKTLEE--------IKPDIAIHVGLAPGRSAISIERIAVNAIDARIPDNEGKKIEDEPI 103 (208)
T ss_dssp TEEEE-EEEECSSTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCCSEEEECEEESCBCCSSCCTTSCCCCSBCS
T ss_pred CeEEE-EEEEeeEHHHHHHHHHHHHHH--------hCCCEEEEecCCCCCceEEeEEEEEcCCCcccCCCCCCCCCCCce
Confidence 44444 458999999999999888877 689999999999999999999999999999999999999999999
Q ss_pred ecCCCceee
Q 034136 90 VLEDGGISR 98 (103)
Q Consensus 90 ~~~gp~~~~ 98 (103)
+++||..-+
T Consensus 104 ~~~gp~~~~ 112 (208)
T 1x10_A 104 VPGAPTAYF 112 (208)
T ss_dssp STTSCSEEE
T ss_pred eCCCCceeE
Confidence 999998643
No 4
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=99.84 E-value=3.3e-21 Score=147.16 Aligned_cols=76 Identities=21% Similarity=0.184 Sum_probs=70.8
Q ss_pred eEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 15 SCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 15 ~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
....|+|+++.+.+.|.++|++ .+||+|||+|+|+||+.|++||+|+|.+|||+|||+|+||.++||.++||
T Consensus 39 ~~~~lPv~y~~~~~~l~~~i~~--------~~Pd~VihvG~aggr~~i~lEr~A~N~~d~ripDn~G~~P~d~~i~~~Gp 110 (223)
T 3ro0_A 39 VSEQVPTVFYKSLAVLREAMKK--------HQPDIIICVGQAGGRMQITPERVAINLNEARIPDNEGNQPVGEDISQGGP 110 (223)
T ss_dssp EEEEECSCTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCCSBEEBSEEESCBCCSSCCTTSCCCCSBCSSTTSC
T ss_pred EEEEeeeEehhHHHHHHHHHHH--------hCCCEEEEeccCCCCceEEEEEEEecCCCCCCCCCCCCCCCCCCCcCCCC
Confidence 4568999999999999888877 78999999999999999999999999999999999999999999999999
Q ss_pred ceee
Q 034136 95 GISR 98 (103)
Q Consensus 95 ~~~~ 98 (103)
..-+
T Consensus 111 ~a~~ 114 (223)
T 3ro0_A 111 AAYW 114 (223)
T ss_dssp SEEE
T ss_pred ceee
Confidence 7643
No 5
>1iu8_A Pyrrolidone-carboxylate peptidase; hydrolase, thiol protease, complete proteome; 1.60A {Pyrococcus horikoshii} SCOP: c.56.4.1
Probab=99.84 E-value=2.3e-21 Score=146.03 Aligned_cols=76 Identities=29% Similarity=0.322 Sum_probs=70.3
Q ss_pred eEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 15 SCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 15 ~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
....|+|+++.+.+.|.+++++ .+||+|||+|+|+||+.|++||+|+|++|||+|||+|++|.++||+++||
T Consensus 34 ~~~~lPv~~~~~~~~l~~~~~~--------~~Pd~vi~vG~a~gr~~i~~Er~A~N~~~~~~pDn~G~~p~~~~i~~~gp 105 (206)
T 1iu8_A 34 VGEILPVSFKRAREKLLKVLDD--------VRPDITINLGLAPGRTHISVERVAVNMIDARIPDNDGEQPKDEPIVEGGP 105 (206)
T ss_dssp EEEEECSCHHHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCEECSSCCTTSCCCEEECSSTTCC
T ss_pred EEEEEEeEHHHHHHHHHHHHHH--------hCCCEEEEcccCCCCceEEEEEEEecCCCCccCCCCCCCCCCCceeCCCC
Confidence 3468999999999999888877 68999999999999999999999999999999999999999999999999
Q ss_pred ceee
Q 034136 95 GISR 98 (103)
Q Consensus 95 ~~~~ 98 (103)
..-+
T Consensus 106 ~~~~ 109 (206)
T 1iu8_A 106 AAYF 109 (206)
T ss_dssp SEEE
T ss_pred ceeE
Confidence 7644
No 6
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=99.84 E-value=3.8e-21 Score=145.81 Aligned_cols=77 Identities=22% Similarity=0.231 Sum_probs=71.0
Q ss_pred eeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceeceeecCC
Q 034136 14 GSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLED 93 (103)
Q Consensus 14 ~~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI~~~g 93 (103)
.....|+|+++.+.+.|.+++++ .+||+|||+|+|+||+.|++||+|+|.+|||+|||+|+||.++||.++|
T Consensus 37 i~~~~lPv~y~~~~~~l~~~~~~--------~~Pd~VihvG~aggr~~i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~~G 108 (215)
T 3lac_A 37 IISKQVPTVFHKSISVLKEYIEE--------LAPEFIICIGQAGGRPDITIERVAINIDDARIADNEGNQPVDVPVVEEG 108 (215)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCSSBCSSTTS
T ss_pred EEEEEEeeEhHHHHHHHHHHHHh--------hCCCeEEEeccCCCCceEEEEEEEeccCCCcCCCcCCCCCCCCcCcCCC
Confidence 34568999999999999888877 7899999999999999999999999999999999999999999999999
Q ss_pred Cceee
Q 034136 94 GGISR 98 (103)
Q Consensus 94 p~~~~ 98 (103)
|..-+
T Consensus 109 p~~~~ 113 (215)
T 3lac_A 109 PAAYW 113 (215)
T ss_dssp CSEEE
T ss_pred Cceee
Confidence 97643
No 7
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=99.83 E-value=4.2e-21 Score=145.66 Aligned_cols=76 Identities=22% Similarity=0.201 Sum_probs=70.8
Q ss_pred eEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 15 SCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 15 ~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
....|+|+++.+.+.|.+++++ .+||+|||+|+|+||+.|++||+|+|.+|||+|||+|++|.++||.++||
T Consensus 39 ~~~~lPv~~~~~~~~l~~~i~~--------~~Pd~Vi~vG~a~gr~~i~lEr~A~N~~~~~~pDn~G~~p~~~~i~~~gp 110 (215)
T 3giu_A 39 DKLKLPTSFKKVDNIINKTLAS--------NHYDVVLAIGQAGGRNAITPERVAINIDDARIPDNDDFQPIDQAIHLDGA 110 (215)
T ss_dssp EEEEECSCHHHHHHHHHHHHHH--------SCCSEEEEEEECTTCCSBEEBCEEESCEECSSCCTTSCCCEEECSCTTSC
T ss_pred EEEEeceehHhHHHHHHHHHHH--------hCCCEEEEeccCCCCceEEEEEEEeccCCCCCCCCCCCCCCCCcccCCCc
Confidence 3568999999999999888877 88999999999999999999999999999999999999999999999999
Q ss_pred ceee
Q 034136 95 GISR 98 (103)
Q Consensus 95 ~~~~ 98 (103)
..-+
T Consensus 111 ~~~~ 114 (215)
T 3giu_A 111 PAYF 114 (215)
T ss_dssp SEEE
T ss_pred cccc
Confidence 7644
No 8
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=99.83 E-value=4.7e-21 Score=145.82 Aligned_cols=80 Identities=25% Similarity=0.201 Sum_probs=72.3
Q ss_pred ceeeeeEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceecee
Q 034136 10 GVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPV 89 (103)
Q Consensus 10 ~~~l~~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI 89 (103)
+..+. ...|+|+++.+.+.|.+++++ .+||+|||+|+|+||+.|++||+|+|+.|||+|||+|++|.++||
T Consensus 34 ~~~i~-~~~lPv~~~~~~~~l~~~i~~--------~~Pd~Vi~vG~aggr~~i~lEr~A~N~~~~~~pDn~G~~p~~~~i 104 (220)
T 1a2z_A 34 NAMVY-GRVLPVSVKRATIELKRYLEE--------IKPEIVINLGLAPTYSNITVERIAVNIIDARIPDNDGYQPIDEKI 104 (220)
T ss_dssp TEEEE-EEEECSCHHHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCBCCSSCCTTSCCCSSBCS
T ss_pred CeEEE-EEEEEeEHHHHHHHHHHHHHH--------hCCCEEEEecCCCCCceEEEEEEEccCCCCCcCCCCCCCCCCCCc
Confidence 44443 458999999999999898877 689999999999999999999999999999999999999999999
Q ss_pred ecCCCceee
Q 034136 90 VLEDGGISR 98 (103)
Q Consensus 90 ~~~gp~~~~ 98 (103)
+++||..-+
T Consensus 105 ~~~gp~~~~ 113 (220)
T 1a2z_A 105 EEDAPLAYM 113 (220)
T ss_dssp CTTSCSEEE
T ss_pred cCCCCceeE
Confidence 999998643
No 9
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=99.83 E-value=5.4e-21 Score=146.52 Aligned_cols=76 Identities=24% Similarity=0.333 Sum_probs=70.9
Q ss_pred eEEEEeecccchHHHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccceeeEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 15 SCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFALERRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 15 ~~~VLeVs~~~a~~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~lErvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
....|+|+++.+.+.|.++|++ .+||+|||+|+|+||+.|++||+|+|++|||+|||+|++|.++||.++||
T Consensus 60 ~~~~lPv~y~~~~~~l~~~i~~--------~~Pd~VihvG~aggr~~i~lEr~A~N~~d~~~pDn~G~~P~~~~i~~~Gp 131 (228)
T 4hps_A 60 EICQIPCIFDTSLEHLYAAVDK--------YQPELVISVGQAGGRTNITVERVAININDARIPDNAGNQPIDTPVIVDGP 131 (228)
T ss_dssp EEEEECSSTTHHHHHHHHHHHH--------HCCSEEEEEEECTTCSSEEEECEEESCEECSSCCTTSCCCEEECSSTTCC
T ss_pred EEEEcceEeHHHHHHHHHHHHh--------hCCCEEEEeccCCCCceEEEEEEEeccCCCCCCCcCCCCCCCCcCcCCCC
Confidence 4568999999999999888877 78999999999999999999999999999999999999999999999999
Q ss_pred ceee
Q 034136 95 GISR 98 (103)
Q Consensus 95 ~~~~ 98 (103)
..-+
T Consensus 132 ~a~~ 135 (228)
T 4hps_A 132 AAYF 135 (228)
T ss_dssp SEEE
T ss_pred ceee
Confidence 7644
No 10
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=24.70 E-value=31 Score=25.16 Aligned_cols=50 Identities=20% Similarity=-0.009 Sum_probs=35.8
Q ss_pred CCccEEEEeeecCCCcccce---eeEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 45 NEQVIWIHVGVNSGSSKFAL---ERRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 45 ~~p~~vl~lG~a~gr~~i~l---ErvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
.+||+++..|=-.=-+.--+ ..-.||+-..-.|.-+|..|....|..+..
T Consensus 85 ~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~ 137 (209)
T 4ds3_A 85 LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPSLLPLFPGLHTHQRALDAGMK 137 (209)
T ss_dssp HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESSCTTSSCSSCHHHHHHHTTCS
T ss_pred cCCCEEEEeccccCcCHHHHhhccCCeEEECCccccCCCChhHHHHHHHcCCC
Confidence 77999998874322222112 234799999999999999999888876554
No 11
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=23.92 E-value=39 Score=24.46 Aligned_cols=50 Identities=14% Similarity=-0.028 Sum_probs=35.5
Q ss_pred CCccEEEEeeecCCCcc--cc-eeeEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 45 NEQVIWIHVGVNSGSSK--FA-LERRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 45 ~~p~~vl~lG~a~gr~~--i~-lErvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
.+||+++..|=-.=-+. +. ...-.||+=..-.|.-+|..|....|..+..
T Consensus 78 ~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~ 130 (209)
T 1meo_A 78 FSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVT 130 (209)
T ss_dssp TTCCEEEEESCCSCCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHHTCS
T ss_pred cCCCEEEEcchhhhCCHHHHhhhcCCEEEEccCcCcCCCCccHHHHHHHcCCC
Confidence 78999998874221111 11 2235799999999999999999888876654
No 12
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=21.29 E-value=41 Score=24.62 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=36.2
Q ss_pred CCCccEEEEeeecCCCcccce---eeEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 44 NNEQVIWIHVGVNSGSSKFAL---ERRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 44 ~~~p~~vl~lG~a~gr~~i~l---ErvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
+.+||+++..|=-.=-+.--+ ..-.||+-..-.|.-+|..|....|..+..
T Consensus 81 ~~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~ 134 (215)
T 3tqr_A 81 HYDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPSLLPKYTGLNTHERALAAGET 134 (215)
T ss_dssp TTCCSEEEESSCCSCCCHHHHHHTTTSEEEEESSSTTTTCSSCHHHHHHHTTCS
T ss_pred hcCCCEEEEccchhhCCHHHHhhccCCeEEeCcccCCCCCChhHHHHHHHcCCC
Confidence 388999998774322222112 224799999999999999999888876544
No 13
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=20.85 E-value=43 Score=24.51 Aligned_cols=59 Identities=14% Similarity=0.057 Sum_probs=40.6
Q ss_pred HHHHHHHHHhhcccCCCCCccEEEEeeecCCCcccce---eeEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 28 PTLLKTLESSISQTNTNNEQVIWIHVGVNSGSSKFAL---ERRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 28 ~~L~~~ie~~~~~~~~~~~p~~vl~lG~a~gr~~i~l---ErvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
+.+.+.|++ .+||+++..|=-.=-+.--+ ..-.||+-..-.|.-+|..|....|..+..
T Consensus 72 ~~~~~~L~~--------~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~Ai~~G~~ 133 (215)
T 3kcq_A 72 EHISTVLRE--------HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAGVK 133 (215)
T ss_dssp HHHHHHHHH--------TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTTTCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHH--------hCCCEEEEeCCceEeCHHHHhhccCCeEEECcccccCCCCccHHHHHHHcCCC
Confidence 445566655 78999998874322222112 234899999999999999999888766543
No 14
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=20.78 E-value=53 Score=23.66 Aligned_cols=50 Identities=18% Similarity=0.115 Sum_probs=36.2
Q ss_pred CCccEEEEeeecCCCccccee---eEEeeccCCCCCCCCCCCceeceeecCCC
Q 034136 45 NEQVIWIHVGVNSGSSKFALE---RRAVNEATFLCPDQLGWQPQQIPVVLEDG 94 (103)
Q Consensus 45 ~~p~~vl~lG~a~gr~~i~lE---rvaiN~~dfriPDn~G~qP~~~pI~~~gp 94 (103)
.+||+++..|=-.=-+.--++ .-.||+-..-.|.-+|..|....|..+..
T Consensus 79 ~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSLLP~yrG~~pi~~ai~~G~~ 131 (216)
T 2ywr_A 79 KGVELVVLAGFMRILSHNFLKYFPNKVINIHPSLIPAFQGLHAQKQAVEFGVK 131 (216)
T ss_dssp TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESSCTTTTCSTTHHHHHHHHTCS
T ss_pred cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCCcCcCCCCccHHHHHHHcCCC
Confidence 789999987643222221223 35899999999999999999988876654
Done!