BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034141
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SD88|ASTER_ARATH Protein Asterix OS=Arabidopsis thaliana GN=At5g07960 PE=3 SV=1
Length = 107
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/103 (81%), Positives = 91/103 (88%), Gaps = 3/103 (2%)
Query: 3 SHNNS---NDPRQPSAAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAII 59
SH N+ NDPRQPSAAKPY+ VAPEDLPVDYSGFIAVI G++GVMFRYK+CSWLAII
Sbjct: 4 SHGNASSVNDPRQPSAAKPYIPRPVAPEDLPVDYSGFIAVILGVSGVMFRYKICSWLAII 63
Query: 60 CCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGTK 102
CAQSLANMRN+E DLKQISMAMMFA+MGLVTNYLGP RP TK
Sbjct: 64 FCAQSLANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPATK 106
>sp|Q86H65|ASTER_DICDI Protein Asterix OS=Dictyostelium discoideum GN=DDB_G0275849 PE=3
SV=1
Length = 98
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 8 NDPRQPS--AAKPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQSL 65
+DPR+ S + + + P++ ++ ++IFG G+M +YK+C W++ +CC L
Sbjct: 2 SDPRKESLIVERFEMRASTEPKEGELELYSLFSIIFGFLGIMLKYKICLWVSAVCCVAYL 61
Query: 66 ANMRNMETDLKQISMAMMFALMGLVTNYLGP 96
+N+++ ++ ++ I + +LMGLV Y GP
Sbjct: 62 SNLKSKDSSVRTILSPVSLSLMGLVMAYFGP 92
>sp|Q9U516|ASTER_MANSE Protein Asterix OS=Manduca sexta PE=3 SV=1
Length = 108
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 7 SNDPRQPSAA---KPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQ 63
++DPR+ KP ST EDL DY + ++F + G+M R K C+W A+ C +
Sbjct: 4 TSDPRRADRERRYKPPPSTTAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSI 63
Query: 64 SLANMRNMETDLKQISMAMMFALMGLVTNYLGPARP 99
S AN R + D KQI + M ++ +V +YL P
Sbjct: 64 SFANSR-VSDDTKQIVSSFMLSISAVVMSYLQNPSP 98
>sp|Q6ZWX0|ASTER_MOUSE Protein Asterix OS=Mus musculus GN=Wdr83os PE=2 SV=1
Length = 106
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 3 SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
S NN +DPR+P+ KP S D P DY + +IF + G+M + K C+W+A+
Sbjct: 2 STNNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61
Query: 59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
C S AN R+ E D KQ+ + M ++ +V +YL +P T
Sbjct: 62 YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103
>sp|Q9Y284|ASTER_HUMAN Protein Asterix OS=Homo sapiens GN=WDR83OS PE=2 SV=1
Length = 106
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 3 SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
S NN +DPR+P+ KP S D P DY + +IF + G+M + K C+W+A+
Sbjct: 2 STNNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61
Query: 59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
C S AN R+ E D KQ+ + M ++ +V +YL +P T
Sbjct: 62 YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103
>sp|Q2M2T6|ASTER_BOVIN Protein Asterix OS=Bos taurus GN=WDR83OS PE=3 SV=1
Length = 106
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 3 SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
S NN +DPR+P+ KP S D P DY + +IF + G+M + K C+W+A+
Sbjct: 2 SANNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61
Query: 59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
C S AN R+ E D KQ+ + M ++ +V +YL +P T
Sbjct: 62 YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103
>sp|Q6Q7K0|ASTER_PIG Protein Asterix OS=Sus scrofa GN=WDR83OS PE=2 SV=1
Length = 106
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 3 SHNNSNDPRQPSAA---KPYVSTAVAPEDLPV-DYSGFIAVIFGLAGVMFRYKLCSWLAI 58
S N+ +DPR P+ KP S D P DY + +IF + G+M + K C+W+A+
Sbjct: 2 SANSMSDPRSPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAV 61
Query: 59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARPGT 101
C S AN R+ E D KQ+ + M ++ +V +YL +P T
Sbjct: 62 YCSFISFANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQPMT 103
>sp|F8RT80|ASTER_CHICK Protein Asterix OS=Gallus gallus GN=WDR83OS PE=2 SV=1
Length = 101
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 9 DPRQPSAAK----PYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIICCAQS 64
DPR+P+ P + A ED DY + ++F + G+M + K C+W+A+ C S
Sbjct: 3 DPRRPARVTRYKPPTTESNPALEDPTPDYMNLLGMVFSMCGLMLKLKWCAWIAVYCSFIS 62
Query: 65 LANMRNMETDLKQISMAMMFALMGLVTNYLGPARP 99
AN R+ E D KQ+ + M ++ +V +YL +P
Sbjct: 63 FANSRSSE-DTKQMMSSFMLSISAVVMSYLQNPQP 96
>sp|Q09993|ASTER_CAEEL Protein Asterix OS=Caenorhabditis elegans GN=K10B2.4 PE=3 SV=1
Length = 113
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 9 DPRQPSAA---KPYVSTA-----VAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAIIC 60
DPR+ + KP STA ++ + LP +Y + +IF + G+M R K CSWLA++C
Sbjct: 6 DPRRTNRIVRYKPLDSTANQQQAISEDPLP-EYMNVLGMIFSMCGLMIRMKWCSWLALVC 64
Query: 61 CAQSLANMRNMETDLKQISMAMMFALMGLVTNYLGPARP 99
S AN R + D KQI + M ++ +V +YL P
Sbjct: 65 SCISFANTRTSD-DAKQIVSSFMLSVSAVVMSYLQNPSP 102
>sp|Q9VRJ8|ASTER_DROME Protein Asterix OS=Drosophila melanogaster GN=CG10674 PE=1 SV=1
Length = 108
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 7/96 (7%)
Query: 5 NNSNDPRQPSAAKPYVS------TAVAPEDLPVDYSGFIAVIFGLAGVMFRYKLCSWLAI 58
N + DPR+ Y + + A ED+ DY + +IF + G+M + K C+W A+
Sbjct: 2 NMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFAL 61
Query: 59 ICCAQSLANMRNMETDLKQISMAMMFALMGLVTNYL 94
C S A+ R + D KQ+ + M ++ +V +YL
Sbjct: 62 YCSCISFASSRASD-DAKQVLSSFMLSVSAVVMSYL 96
>sp|Q9JJQ0|PIGB_MOUSE GPI mannosyltransferase 3 OS=Mus musculus GN=Pigb PE=1 SV=2
Length = 542
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 43 LAGVMFRYKLCSWLAIICCAQSLANMRNMETDLKQISM 80
+A +F +LCSW CC ++L N MET L +++
Sbjct: 159 VAQWVFLCQLCSWFTWYCCTRTLTN--TMETSLTALAL 194
>sp|Q92521|PIGB_HUMAN GPI mannosyltransferase 3 OS=Homo sapiens GN=PIGB PE=2 SV=1
Length = 554
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 47 MFRYKLCSWLAIICCAQSLANMRNMETDLKQISM 80
+F +LCSW CC ++L N MET L I++
Sbjct: 174 VFFCQLCSWFTWYCCTRTLTN--TMETVLTIIAL 205
>sp|A0PY95|ALR_CLONN Alanine racemase OS=Clostridium novyi (strain NT) GN=alr PE=3 SV=1
Length = 387
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 29 LPVDYS-GFIAVIFGLAGVMFRYKLCSWLAIICCAQSLANMRNMETDLK 76
LPV Y+ G+ ++FG A V+ +L + IC Q + ++ +++ D+K
Sbjct: 282 LPVGYADGYTRLLFGKAKVIINGQLAPVVGRICMDQCMVDITDIKGDIK 330
>sp|Q1LZA0|PIGB_BOVIN GPI mannosyltransferase 3 OS=Bos taurus GN=PIGB PE=2 SV=1
Length = 541
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 47 MFRYKLCSWLAIICCAQSLANMRNMETDLKQISM 80
+F +LCSW CC ++L N MET L I++
Sbjct: 164 VFFCQLCSWFTWYCCTRTLTN--TMETVLTIIAL 195
>sp|Q9W495|PGAP1_DROME GPI inositol-deacylase OS=Drosophila melanogaster GN=CG3160 PE=1
SV=3
Length = 980
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 17 KPYVSTAVAPEDLPVDYSGFIAVIFGLAGVMFRY--KLCSWLAIICCAQSLANMRNMETD 74
K +S+ V PE P+DYS ++++ A + L +WLA+ + + T
Sbjct: 688 KLIISSRVFPEPEPLDYSINVSIVIHCAAIALSLLATLGTWLALTLYGNAFYRLALRITR 747
Query: 75 LKQISMAMMFALM 87
L Q + +M ++M
Sbjct: 748 LSQATSNVMISIM 760
>sp|A5V3V0|GATA_SPHWW Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sphingomonas
wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=gatA
PE=3 SV=1
Length = 495
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 4 HNNSNDPRQPSAAKPYVSTAVAPEDLP----VDYSGFI---AVIFGLAGVMFRYKLCSWL 56
++ N P P + S+A+A +P D G I A G+AG+ Y CS
Sbjct: 147 NDGGNAPLAPGGSSGGSSSAIAARIVPAATGTDTGGSIRQPAAFTGIAGIKPTYGRCSRF 206
Query: 57 AIICCAQSLANMRNMETDLKQISMAMMFALMGL 89
I+ A SL M D++ S ++ A+ G
Sbjct: 207 GIVAFASSLDQAGAMAQDVRD-SAILLEAMSGF 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.132 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,943,577
Number of Sequences: 539616
Number of extensions: 1086272
Number of successful extensions: 2416
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2397
Number of HSP's gapped (non-prelim): 17
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)