Query 034147
Match_columns 103
No_of_seqs 150 out of 1962
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 17:32:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034147.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034147hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wm8_A MDP-1, magnesium-depend 99.6 1.3E-14 4.5E-19 92.4 7.3 74 21-97 26-115 (187)
2 3ib6_A Uncharacterized protein 99.5 5.6E-14 1.9E-18 89.7 8.9 77 22-101 3-87 (189)
3 2pr7_A Haloacid dehalogenase/e 99.5 8.9E-15 3E-19 88.0 4.9 66 22-100 2-67 (137)
4 3kbb_A Phosphorylated carbohyd 99.5 1.8E-14 6.3E-19 92.6 6.4 53 47-102 83-135 (216)
5 3l8h_A Putative haloacid dehal 99.5 9E-14 3.1E-18 87.5 7.3 65 22-87 1-80 (179)
6 3m9l_A Hydrolase, haloacid deh 99.5 7.7E-14 2.6E-18 89.1 5.6 81 20-101 4-122 (205)
7 2i33_A Acid phosphatase; HAD s 99.5 1.8E-13 6.1E-18 91.9 7.5 81 18-101 55-156 (258)
8 2oda_A Hypothetical protein ps 99.4 2.8E-13 9.6E-18 87.3 6.6 75 19-101 3-81 (196)
9 2gmw_A D,D-heptose 1,7-bisphos 99.4 5.8E-13 2E-17 86.4 8.2 68 20-89 23-105 (211)
10 3qgm_A P-nitrophenyl phosphata 99.4 4.2E-13 1.4E-17 89.1 7.6 66 21-99 7-75 (268)
11 1k1e_A Deoxy-D-mannose-octulos 99.4 2.7E-13 9.1E-18 86.0 6.0 72 20-92 6-78 (180)
12 3s6j_A Hydrolase, haloacid deh 99.4 4.7E-13 1.6E-17 86.2 6.3 53 47-102 90-142 (233)
13 3um9_A Haloacid dehalogenase, 99.4 1.5E-12 5E-17 83.8 8.5 54 46-102 94-147 (230)
14 4ex6_A ALNB; modified rossman 99.4 3.6E-13 1.2E-17 87.3 5.7 55 45-102 101-155 (237)
15 3e58_A Putative beta-phosphogl 99.4 7E-13 2.4E-17 84.0 6.9 52 48-102 89-140 (214)
16 2ah5_A COG0546: predicted phos 99.4 3E-13 1E-17 87.1 5.0 51 47-101 83-133 (210)
17 3mc1_A Predicted phosphatase, 99.4 5.4E-13 1.8E-17 85.8 6.0 53 47-102 85-137 (226)
18 2p9j_A Hypothetical protein AQ 99.4 5.8E-13 2E-17 82.7 5.7 71 21-92 8-79 (162)
19 3pdw_A Uncharacterized hydrola 99.4 6.6E-13 2.2E-17 88.2 6.2 66 21-99 5-73 (266)
20 3dv9_A Beta-phosphoglucomutase 99.4 2.4E-12 8.3E-17 83.6 8.4 54 46-101 106-159 (247)
21 2no4_A (S)-2-haloacid dehaloge 99.4 1.4E-12 4.7E-17 85.0 7.2 52 48-102 105-156 (240)
22 2obb_A Hypothetical protein; s 99.4 1.9E-12 6.3E-17 80.1 7.3 63 22-90 3-68 (142)
23 2pib_A Phosphorylated carbohyd 99.4 1E-12 3.6E-17 83.3 6.4 53 47-102 83-135 (216)
24 2nyv_A Pgpase, PGP, phosphogly 99.4 1.3E-12 4.6E-17 84.6 6.9 54 45-101 80-133 (222)
25 1zrn_A L-2-haloacid dehalogena 99.4 1.4E-12 4.9E-17 84.3 6.8 51 48-101 95-145 (232)
26 3nuq_A Protein SSM1, putative 99.4 2.4E-12 8.3E-17 85.9 8.0 52 47-101 141-194 (282)
27 3kzx_A HAD-superfamily hydrola 99.4 2.4E-12 8.3E-17 83.2 7.7 53 46-101 101-153 (231)
28 4g9b_A Beta-PGM, beta-phosphog 99.4 1.9E-12 6.6E-17 85.2 7.3 51 47-102 94-144 (243)
29 3sd7_A Putative phosphatase; s 99.4 1.2E-12 4.1E-17 85.1 6.0 53 47-102 109-161 (240)
30 4gib_A Beta-phosphoglucomutase 99.4 2.4E-12 8.3E-17 85.0 7.4 52 46-102 114-165 (250)
31 2hsz_A Novel predicted phospha 99.3 3.6E-12 1.2E-16 83.7 7.6 52 47-101 113-164 (243)
32 2fpr_A Histidine biosynthesis 99.3 2.7E-12 9.1E-17 81.3 6.6 74 20-98 12-102 (176)
33 3epr_A Hydrolase, haloacid deh 99.3 2.1E-12 7.3E-17 85.9 6.2 66 21-99 4-72 (264)
34 3m1y_A Phosphoserine phosphata 99.3 1E-12 3.5E-17 84.1 4.1 49 47-98 74-122 (217)
35 3e8m_A Acylneuraminate cytidyl 99.3 3.9E-12 1.3E-16 79.1 6.6 72 20-92 2-74 (164)
36 4eek_A Beta-phosphoglucomutase 99.3 1.2E-12 4.2E-17 86.1 4.3 54 45-101 107-161 (259)
37 3fvv_A Uncharacterized protein 99.3 4.2E-12 1.4E-16 82.3 6.7 44 48-92 92-135 (232)
38 3umb_A Dehalogenase-like hydro 99.3 4.5E-12 1.5E-16 81.7 6.5 53 47-102 98-150 (233)
39 3qxg_A Inorganic pyrophosphata 99.3 4.5E-12 1.5E-16 82.6 6.6 54 46-101 107-160 (243)
40 3pgv_A Haloacid dehalogenase-l 99.3 5.8E-12 2E-16 84.6 7.1 62 20-91 19-80 (285)
41 3mn1_A Probable YRBI family ph 99.3 6E-12 2E-16 80.5 6.7 71 21-92 18-89 (189)
42 1rkq_A Hypothetical protein YI 99.3 1.4E-11 5E-16 82.8 8.7 59 22-90 5-63 (282)
43 2p11_A Hypothetical protein; p 99.3 1.7E-12 5.7E-17 84.6 3.9 44 47-92 95-138 (231)
44 3nvb_A Uncharacterized protein 99.3 2.8E-12 9.7E-17 90.4 5.0 73 19-92 219-304 (387)
45 3mpo_A Predicted hydrolase of 99.3 1.2E-11 4.2E-16 82.4 7.8 60 21-90 4-63 (279)
46 2zg6_A Putative uncharacterize 99.3 4.1E-12 1.4E-16 82.1 5.3 50 48-101 95-144 (220)
47 3ij5_A 3-deoxy-D-manno-octulos 99.3 7.8E-12 2.7E-16 81.6 6.4 72 20-92 47-119 (211)
48 4dw8_A Haloacid dehalogenase-l 99.3 1.8E-11 6E-16 81.7 8.2 59 21-89 4-62 (279)
49 3mmz_A Putative HAD family hyd 99.3 1E-11 3.4E-16 78.6 6.7 71 20-92 10-81 (176)
50 3ddh_A Putative haloacid dehal 99.3 1.2E-11 4.1E-16 79.2 6.9 51 47-100 104-155 (234)
51 1wr8_A Phosphoglycolate phosph 99.3 1.6E-11 5.4E-16 80.4 7.6 59 22-90 3-61 (231)
52 3cnh_A Hydrolase family protei 99.3 6.6E-12 2.3E-16 79.6 5.3 50 48-101 86-135 (200)
53 4eze_A Haloacid dehalogenase-l 99.3 3.4E-12 1.2E-16 87.8 4.2 46 46-92 177-222 (317)
54 3zvl_A Bifunctional polynucleo 99.3 1.6E-11 5.6E-16 87.1 7.7 77 20-101 56-147 (416)
55 3kd3_A Phosphoserine phosphohy 99.3 4.9E-12 1.7E-16 80.4 4.5 42 47-89 81-122 (219)
56 2hx1_A Predicted sugar phospha 99.3 1.4E-11 4.7E-16 82.6 6.9 67 21-100 13-83 (284)
57 3ed5_A YFNB; APC60080, bacillu 99.3 1.8E-11 6E-16 79.0 7.2 53 46-102 101-153 (238)
58 3n07_A 3-deoxy-D-manno-octulos 99.3 2.3E-11 7.9E-16 78.5 7.6 71 21-92 24-95 (195)
59 3l5k_A Protein GS1, haloacid d 99.3 2.6E-12 9E-17 84.1 3.2 53 46-101 110-163 (250)
60 1nnl_A L-3-phosphoserine phosp 99.3 5.3E-12 1.8E-16 81.5 4.6 45 47-92 85-131 (225)
61 2hoq_A Putative HAD-hydrolase 99.2 6.3E-12 2.2E-16 81.9 4.9 52 48-102 94-145 (241)
62 2fi1_A Hydrolase, haloacid deh 99.2 2.1E-11 7.1E-16 76.5 6.9 49 49-101 83-131 (190)
63 1qq5_A Protein (L-2-haloacid d 99.2 2.8E-11 9.5E-16 79.6 7.8 50 48-102 93-142 (253)
64 3nas_A Beta-PGM, beta-phosphog 99.2 1.8E-11 6.1E-16 79.0 6.7 48 49-101 93-140 (233)
65 2i7d_A 5'(3')-deoxyribonucleot 99.2 1.5E-12 5E-17 83.1 1.4 42 46-88 71-113 (193)
66 3iru_A Phoshonoacetaldehyde hy 99.2 1.5E-11 5E-16 81.1 6.2 52 47-101 110-162 (277)
67 2gfh_A Haloacid dehalogenase-l 99.2 1.1E-11 3.8E-16 82.5 5.5 50 48-101 121-170 (260)
68 1xvi_A MPGP, YEDP, putative ma 99.2 2.2E-11 7.4E-16 81.8 6.9 60 21-90 8-67 (275)
69 3n1u_A Hydrolase, HAD superfam 99.2 5.6E-12 1.9E-16 80.8 3.7 72 20-92 17-89 (191)
70 3dnp_A Stress response protein 99.2 2.9E-11 9.9E-16 81.0 7.3 59 21-89 5-63 (290)
71 1q92_A 5(3)-deoxyribonucleotid 99.2 3.1E-12 1.1E-16 81.9 2.2 46 46-92 73-120 (197)
72 3skx_A Copper-exporting P-type 99.2 1.8E-11 6.3E-16 81.0 6.0 51 48-101 144-194 (280)
73 3dao_A Putative phosphatse; st 99.2 1.5E-11 5.2E-16 82.6 5.6 61 20-89 19-79 (283)
74 1nrw_A Hypothetical protein, h 99.2 3.2E-11 1.1E-15 81.2 7.1 59 22-90 4-62 (288)
75 1l6r_A Hypothetical protein TA 99.2 1.7E-11 5.8E-16 80.4 5.5 59 22-90 5-63 (227)
76 2o2x_A Hypothetical protein; s 99.2 2.5E-11 8.7E-16 78.7 6.3 67 21-89 30-111 (218)
77 3kc2_A Uncharacterized protein 99.2 3E-11 1E-15 84.3 7.0 67 21-100 12-82 (352)
78 2pq0_A Hypothetical conserved 99.2 3.3E-11 1.1E-15 79.7 6.9 59 22-90 3-61 (258)
79 3k1z_A Haloacid dehalogenase-l 99.2 3.2E-11 1.1E-15 79.9 6.9 51 47-101 105-155 (263)
80 3fzq_A Putative hydrolase; YP_ 99.2 2.2E-11 7.6E-16 80.7 5.9 60 21-90 4-63 (274)
81 2r8e_A 3-deoxy-D-manno-octulos 99.2 3.4E-11 1.2E-15 76.8 6.5 71 21-92 25-96 (188)
82 3p96_A Phosphoserine phosphata 99.2 7.9E-12 2.7E-16 88.3 3.8 74 19-93 182-300 (415)
83 3qnm_A Haloacid dehalogenase-l 99.2 4.1E-11 1.4E-15 77.2 6.7 52 47-102 106-157 (240)
84 1vjr_A 4-nitrophenylphosphatas 99.2 5E-11 1.7E-15 79.0 7.1 58 21-89 16-76 (271)
85 1nf2_A Phosphatase; structural 99.2 5.5E-11 1.9E-15 79.3 7.3 58 22-90 2-59 (268)
86 2hi0_A Putative phosphoglycola 99.2 3.8E-11 1.3E-15 78.4 6.4 51 47-101 109-159 (240)
87 2w43_A Hypothetical 2-haloalka 99.2 4.2E-11 1.4E-15 76.1 5.9 49 48-101 74-122 (201)
88 1xpj_A Hypothetical protein; s 99.2 6.1E-11 2.1E-15 71.6 6.3 51 22-75 1-51 (126)
89 3f9r_A Phosphomannomutase; try 99.2 6.8E-11 2.3E-15 78.5 7.1 49 21-78 3-51 (246)
90 2hdo_A Phosphoglycolate phosph 99.2 1.3E-11 4.3E-16 78.8 3.3 52 46-101 81-132 (209)
91 3bwv_A Putative 5'(3')-deoxyri 99.2 7.2E-11 2.5E-15 74.4 6.8 77 22-101 4-124 (180)
92 3smv_A S-(-)-azetidine-2-carbo 99.2 3.1E-11 1E-15 77.7 5.1 49 47-101 98-146 (240)
93 1te2_A Putative phosphatase; s 99.2 5.2E-11 1.8E-15 76.0 6.0 52 47-101 93-144 (226)
94 3d6j_A Putative haloacid dehal 99.2 5.8E-11 2E-15 75.7 6.2 52 47-101 88-139 (225)
95 2i6x_A Hydrolase, haloacid deh 99.2 1.8E-11 6.1E-16 78.1 3.6 50 48-101 89-144 (211)
96 1zjj_A Hypothetical protein PH 99.2 6.6E-11 2.3E-15 78.6 6.5 65 22-99 1-68 (263)
97 3pct_A Class C acid phosphatas 99.2 7.1E-11 2.4E-15 79.4 6.7 71 22-92 58-148 (260)
98 2b30_A Pvivax hypothetical pro 99.2 6.9E-11 2.4E-15 80.4 6.7 60 21-89 26-88 (301)
99 2b82_A APHA, class B acid phos 99.2 3.7E-12 1.3E-16 82.9 0.2 64 21-85 36-124 (211)
100 3ocu_A Lipoprotein E; hydrolas 99.1 5.7E-11 1.9E-15 80.0 5.8 72 21-92 57-148 (262)
101 2hhl_A CTD small phosphatase-l 99.1 1.4E-10 4.7E-15 75.0 7.3 77 21-101 27-117 (195)
102 1rlm_A Phosphatase; HAD family 99.1 2.9E-11 1E-15 80.8 4.2 57 22-88 3-60 (271)
103 2oyc_A PLP phosphatase, pyrido 99.1 1.2E-10 4.1E-15 79.0 7.3 58 21-89 20-80 (306)
104 2hcf_A Hydrolase, haloacid deh 99.1 5.7E-11 1.9E-15 76.5 5.2 51 47-100 92-143 (234)
105 2ho4_A Haloacid dehalogenase-l 99.1 1.9E-10 6.5E-15 75.4 7.7 60 20-90 5-67 (259)
106 4dcc_A Putative haloacid dehal 99.1 3.9E-11 1.3E-15 77.7 4.1 50 48-101 112-167 (229)
107 3u26_A PF00702 domain protein; 99.1 5E-11 1.7E-15 76.7 4.6 51 47-101 99-149 (234)
108 2b0c_A Putative phosphatase; a 99.1 5.3E-12 1.8E-16 80.2 -0.2 52 47-101 90-142 (206)
109 2zos_A MPGP, mannosyl-3-phosph 99.1 1E-10 3.4E-15 77.5 5.7 57 22-90 2-58 (249)
110 2go7_A Hydrolase, haloacid deh 99.1 1.5E-10 5.2E-15 72.6 6.3 51 47-101 84-134 (207)
111 3ewi_A N-acylneuraminate cytid 99.1 1.4E-10 4.9E-15 73.2 6.1 67 20-89 7-76 (168)
112 2om6_A Probable phosphoserine 99.1 2E-10 6.9E-15 73.7 6.8 50 49-101 100-152 (235)
113 1l7m_A Phosphoserine phosphata 99.1 5.9E-11 2E-15 75.2 4.1 45 47-92 75-119 (211)
114 2fea_A 2-hydroxy-3-keto-5-meth 99.1 5.5E-11 1.9E-15 77.7 4.0 49 47-101 76-124 (236)
115 2wf7_A Beta-PGM, beta-phosphog 99.1 2.5E-10 8.6E-15 72.7 6.8 50 47-101 90-139 (221)
116 3l7y_A Putative uncharacterize 99.1 6.1E-11 2.1E-15 80.4 4.1 58 21-88 36-94 (304)
117 2ght_A Carboxy-terminal domain 99.1 3.3E-10 1.1E-14 72.3 7.2 77 21-101 14-104 (181)
118 4ap9_A Phosphoserine phosphata 99.1 2.7E-11 9.3E-16 76.2 1.4 44 47-92 78-121 (201)
119 1swv_A Phosphonoacetaldehyde h 99.1 3.1E-10 1.1E-14 74.7 6.1 53 47-101 102-154 (267)
120 1yv9_A Hydrolase, haloacid deh 99.0 6.2E-10 2.1E-14 73.6 7.5 59 21-90 4-66 (264)
121 3r4c_A Hydrolase, haloacid deh 99.0 4.5E-10 1.5E-14 74.4 6.4 58 21-88 11-68 (268)
122 1rku_A Homoserine kinase; phos 99.0 2.2E-10 7.4E-15 73.0 4.6 45 46-92 67-111 (206)
123 1u02_A Trehalose-6-phosphate p 99.0 2.1E-10 7.1E-15 75.6 4.4 59 22-86 1-59 (239)
124 2rbk_A Putative uncharacterize 99.0 1.2E-10 4.1E-15 77.2 3.2 55 23-87 3-57 (261)
125 3umg_A Haloacid dehalogenase; 99.0 4E-10 1.4E-14 73.1 5.6 49 47-101 115-163 (254)
126 3i28_A Epoxide hydrolase 2; ar 99.0 1.4E-10 4.8E-15 82.2 2.9 52 47-101 99-154 (555)
127 2pke_A Haloacid delahogenase-l 99.0 7.2E-10 2.5E-14 72.5 6.1 50 47-100 111-160 (251)
128 2qlt_A (DL)-glycerol-3-phospha 99.0 4.1E-10 1.4E-14 75.1 5.0 53 45-101 111-164 (275)
129 3umc_A Haloacid dehalogenase; 99.0 4.8E-10 1.6E-14 73.0 5.1 49 47-101 119-167 (254)
130 4as2_A Phosphorylcholine phosp 99.0 4.5E-10 1.5E-14 77.7 5.1 52 48-100 143-194 (327)
131 2amy_A PMM 2, phosphomannomuta 99.0 8.4E-10 2.9E-14 72.7 6.2 47 21-77 5-51 (246)
132 2x4d_A HLHPP, phospholysine ph 99.0 2.3E-09 7.8E-14 70.3 7.8 62 21-89 11-75 (271)
133 3vay_A HAD-superfamily hydrola 99.0 5E-10 1.7E-14 71.9 4.4 46 47-101 104-149 (230)
134 2fue_A PMM 1, PMMH-22, phospho 98.9 1.3E-09 4.3E-14 72.6 5.9 52 21-83 12-63 (262)
135 3zx4_A MPGP, mannosyl-3-phosph 98.9 1.1E-09 3.7E-14 72.6 5.5 52 24-90 2-53 (259)
136 2c4n_A Protein NAGD; nucleotid 98.9 4E-09 1.4E-13 68.0 7.6 57 22-89 3-62 (250)
137 3gyg_A NTD biosynthesis operon 98.9 6.6E-09 2.2E-13 69.6 8.1 58 21-90 21-86 (289)
138 2g80_A Protein UTR4; YEL038W, 98.9 4.3E-09 1.5E-13 70.2 6.4 34 48-86 125-158 (253)
139 4gxt_A A conserved functionall 98.8 5.2E-09 1.8E-13 73.7 5.8 52 48-100 221-272 (385)
140 1s2o_A SPP, sucrose-phosphatas 98.8 3.5E-09 1.2E-13 69.9 3.4 55 23-89 4-58 (244)
141 3n28_A Phosphoserine phosphata 98.8 4.8E-09 1.6E-13 72.0 3.5 47 46-93 176-222 (335)
142 1ltq_A Polynucleotide kinase; 98.7 6.3E-08 2.1E-12 65.3 7.9 74 22-100 159-246 (301)
143 3a1c_A Probable copper-exporti 98.6 4.1E-08 1.4E-12 66.1 5.3 69 21-98 142-210 (287)
144 2fdr_A Conserved hypothetical 98.6 1.4E-08 4.7E-13 65.0 2.5 49 47-100 86-134 (229)
145 3qle_A TIM50P; chaperone, mito 98.6 7.9E-08 2.7E-12 62.5 5.9 69 21-92 33-102 (204)
146 2yj3_A Copper-transporting ATP 98.0 5.8E-09 2E-13 69.6 0.0 48 48-98 136-183 (263)
147 3ef0_A RNA polymerase II subun 98.5 1.6E-07 5.6E-12 65.9 6.1 77 21-100 17-125 (372)
148 4fe3_A Cytosolic 5'-nucleotida 98.5 3.6E-07 1.2E-11 61.7 6.1 44 46-90 139-182 (297)
149 3shq_A UBLCP1; phosphatase, hy 98.4 8.3E-07 2.8E-11 61.2 7.7 68 20-91 138-205 (320)
150 1qyi_A ZR25, hypothetical prot 98.4 3.7E-07 1.3E-11 64.4 5.1 53 46-101 213-267 (384)
151 1yns_A E-1 enzyme; hydrolase f 98.2 4.9E-06 1.7E-10 55.2 6.3 51 47-100 129-182 (261)
152 1y8a_A Hypothetical protein AF 97.8 8.8E-07 3E-11 60.7 -2.0 40 21-75 20-59 (332)
153 3ef1_A RNA polymerase II subun 97.6 0.00018 6.3E-09 51.5 7.2 76 21-99 25-132 (442)
154 3j08_A COPA, copper-exporting 97.2 0.00067 2.3E-08 50.6 6.1 65 21-92 436-500 (645)
155 3rfu_A Copper efflux ATPase; a 97.0 0.00079 2.7E-08 51.0 4.9 65 21-92 533-597 (736)
156 1yns_A E-1 enzyme; hydrolase f 97.0 0.00019 6.4E-09 47.5 0.9 16 21-36 9-24 (261)
157 3j09_A COPA, copper-exporting 96.9 0.0019 6.5E-08 48.8 6.2 65 21-92 514-578 (723)
158 2kln_A Probable sulphate-trans 96.6 0.029 9.8E-07 33.1 8.4 84 2-98 28-111 (130)
159 2jc9_A Cytosolic purine 5'-nuc 96.4 0.007 2.4E-07 44.5 5.7 39 47-87 245-284 (555)
160 3a1c_A Probable copper-exporti 96.3 0.0019 6.4E-08 43.1 2.2 17 22-38 32-48 (287)
161 4g63_A Cytosolic IMP-GMP speci 95.3 0.036 1.2E-06 40.1 5.7 50 49-101 187-245 (470)
162 3ixz_A Potassium-transporting 95.3 0.025 8.6E-07 44.3 5.2 42 47-89 603-644 (1034)
163 3ar4_A Sarcoplasmic/endoplasmi 95.3 0.03 1E-06 43.7 5.6 44 47-91 602-645 (995)
164 1qyi_A ZR25, hypothetical prot 95.3 0.007 2.4E-07 42.6 1.8 19 22-40 1-19 (384)
165 2zxe_A Na, K-ATPase alpha subu 95.3 0.029 9.9E-07 44.0 5.4 42 47-89 598-639 (1028)
166 3llo_A Prestin; STAS domain, c 94.3 0.23 7.8E-06 29.5 6.6 59 21-92 63-121 (143)
167 1mhs_A Proton pump, plasma mem 94.1 0.067 2.3E-06 41.7 4.8 44 46-90 533-576 (920)
168 3ny7_A YCHM protein, sulfate t 94.1 0.11 3.7E-06 30.2 4.7 65 21-99 45-109 (118)
169 3b8c_A ATPase 2, plasma membra 94.1 0.058 2E-06 41.8 4.4 43 47-90 487-529 (885)
170 4dgh_A Sulfate permease family 93.5 0.31 1.1E-05 28.5 6.1 66 20-98 47-112 (130)
171 4dgf_A Sulfate transporter sul 91.2 0.42 1.4E-05 28.2 4.7 60 20-92 50-109 (135)
172 2ka5_A Putative anti-sigma fac 91.2 1.3 4.5E-05 25.6 7.5 59 21-92 51-109 (125)
173 2jc9_A Cytosolic purine 5'-nuc 89.7 0.25 8.6E-06 36.4 3.1 17 20-36 63-79 (555)
174 1th8_B Anti-sigma F factor ant 89.5 1.2 4.1E-05 25.0 5.5 73 5-92 28-100 (116)
175 1sbo_A Putative anti-sigma fac 89.0 1.8 6.2E-05 23.9 7.2 57 23-92 45-101 (110)
176 3t6o_A Sulfate transporter/ant 88.8 1.5 5.1E-05 25.1 5.6 59 21-92 47-106 (121)
177 3zxn_A RSBS, anti-sigma-factor 87.9 2.7 9.1E-05 24.4 7.8 71 4-89 27-97 (123)
178 4hyl_A Stage II sporulation pr 87.7 1.6 5.4E-05 24.7 5.2 56 24-92 44-99 (117)
179 1y8a_A Hypothetical protein AF 87.3 0.63 2.2E-05 31.4 3.7 39 48-88 103-141 (332)
180 3l86_A Acetylglutamate kinase; 86.3 5 0.00017 26.9 7.7 57 22-92 36-92 (279)
181 1zjj_A Hypothetical protein PH 85.7 0.77 2.6E-05 29.7 3.4 27 47-75 129-155 (263)
182 3hzh_A Chemotaxis response reg 85.4 3.9 0.00013 23.9 6.7 66 9-92 71-138 (157)
183 3n28_A Phosphoserine phosphata 85.2 1.4 4.8E-05 29.6 4.6 41 49-90 44-95 (335)
184 2ho4_A Haloacid dehalogenase-l 84.8 0.028 9.5E-07 36.1 -3.9 27 48-76 122-148 (259)
185 2lpm_A Two-component response 84.8 1.2 4.2E-05 26.0 3.7 50 9-77 43-92 (123)
186 3jte_A Response regulator rece 83.4 4.4 0.00015 23.0 8.0 66 9-92 37-104 (143)
187 1yv9_A Hydrolase, haloacid deh 83.3 1.1 3.9E-05 28.7 3.4 27 47-75 125-151 (264)
188 1h4x_A SPOIIAA, anti-sigma F f 83.1 4.4 0.00015 22.7 6.1 72 6-92 28-99 (117)
189 3gyg_A NTD biosynthesis operon 82.8 0.27 9.1E-06 32.3 0.2 44 48-92 122-187 (289)
190 4fak_A Ribosomal RNA large sub 82.3 4.4 0.00015 25.1 5.6 64 9-87 62-126 (163)
191 1x92_A APC5045, phosphoheptose 81.7 2.8 9.6E-05 26.0 4.7 29 50-78 126-154 (199)
192 2bty_A Acetylglutamate kinase; 80.5 5.7 0.00019 26.3 6.1 69 10-92 11-79 (282)
193 2xbl_A Phosphoheptose isomeras 79.7 2.9 0.0001 25.7 4.3 28 51-78 130-157 (198)
194 3sho_A Transcriptional regulat 79.7 3 0.0001 25.5 4.2 28 51-78 101-128 (187)
195 2xhz_A KDSD, YRBH, arabinose 5 79.3 2.8 9.5E-05 25.5 4.0 29 50-78 109-137 (183)
196 1m3s_A Hypothetical protein YC 79.0 3.7 0.00013 25.1 4.5 28 51-78 93-120 (186)
197 3heb_A Response regulator rece 78.5 7.3 0.00025 22.3 7.8 55 20-92 58-116 (152)
198 3kht_A Response regulator; PSI 78.3 7.2 0.00025 22.1 7.8 63 10-92 42-108 (144)
199 2ap9_A NAG kinase, acetylgluta 77.8 6.9 0.00024 26.2 5.9 68 11-92 16-83 (299)
200 1vim_A Hypothetical protein AF 77.8 3.3 0.00011 25.9 4.1 29 50-78 102-130 (200)
201 2buf_A Acetylglutamate kinase; 77.7 11 0.00037 25.3 6.8 68 11-92 17-84 (300)
202 2yva_A DNAA initiator-associat 77.5 3.6 0.00012 25.3 4.2 28 50-77 122-149 (196)
203 3can_A Pyruvate-formate lyase- 77.3 3.8 0.00013 24.9 4.2 29 47-75 14-43 (182)
204 2oyc_A PLP phosphatase, pyrido 77.0 1.9 6.4E-05 28.5 2.9 28 47-75 155-182 (306)
205 2qxy_A Response regulator; reg 77.0 7.8 0.00027 21.8 8.0 62 10-92 39-102 (142)
206 1tk9_A Phosphoheptose isomeras 76.9 2.6 9E-05 25.7 3.4 28 51-78 124-151 (188)
207 3lua_A Response regulator rece 75.7 8.5 0.00029 21.6 6.7 39 53-92 66-108 (140)
208 2rd5_A Acetylglutamate kinase- 75.7 6.1 0.00021 26.4 5.2 67 11-91 27-93 (298)
209 1k68_A Phytochrome response re 75.5 8.3 0.00028 21.4 7.8 55 20-92 54-112 (140)
210 3mm4_A Histidine kinase homolo 74.9 12 0.00042 23.0 7.7 54 21-92 119-179 (206)
211 3luf_A Two-component system re 74.4 5.2 0.00018 25.9 4.4 39 54-93 64-102 (259)
212 1to0_A Hypothetical UPF0247 pr 74.4 11 0.00037 23.4 5.7 62 10-86 59-121 (167)
213 2zay_A Response regulator rece 74.0 9.8 0.00034 21.5 7.3 54 21-92 52-109 (147)
214 3ilh_A Two component response 73.8 9.7 0.00033 21.4 7.4 55 20-92 59-120 (146)
215 3to5_A CHEY homolog; alpha(5)b 73.5 7.6 0.00026 22.8 4.7 38 54-92 73-114 (134)
216 1jeo_A MJ1247, hypothetical pr 73.2 3.7 0.00013 24.9 3.4 26 51-76 96-121 (180)
217 2hx1_A Predicted sugar phospha 73.0 3.6 0.00012 26.7 3.4 26 51-77 148-173 (284)
218 2v5h_A Acetylglutamate kinase; 72.6 7.3 0.00025 26.5 5.0 67 12-92 41-107 (321)
219 3nhm_A Response regulator; pro 72.6 10 0.00034 21.0 5.5 40 21-77 47-90 (133)
220 3cnb_A DNA-binding response re 71.7 11 0.00037 21.1 7.9 54 21-92 54-111 (143)
221 2eel_A Cell death activator CI 71.6 5 0.00017 22.5 3.3 33 3-36 29-61 (91)
222 3trj_A Phosphoheptose isomeras 71.4 4.2 0.00014 25.5 3.4 29 50-78 127-155 (201)
223 3gt7_A Sensor protein; structu 71.3 12 0.00042 21.5 8.3 64 9-92 41-108 (154)
224 2i2w_A Phosphoheptose isomeras 71.3 3.2 0.00011 26.1 2.8 27 51-77 145-171 (212)
225 1f2r_I Inhibitor of caspase-ac 71.2 12 0.00041 21.3 4.9 35 3-37 38-73 (100)
226 3gl9_A Response regulator; bet 71.1 11 0.00037 20.8 8.0 63 10-92 37-103 (122)
227 2wfc_A Peroxiredoxin 5, PRDX5; 71.0 8.9 0.0003 23.1 4.7 38 51-89 53-91 (167)
228 3gkn_A Bacterioferritin comigr 70.6 13 0.00044 21.7 5.3 38 51-89 56-93 (163)
229 2qvg_A Two component response 70.1 12 0.00041 21.0 7.3 55 20-92 58-116 (143)
230 3fxa_A SIS domain protein; str 69.9 4.1 0.00014 25.3 3.0 28 51-78 106-133 (201)
231 4e7p_A Response regulator; DNA 69.7 13 0.00045 21.2 8.4 63 10-92 57-121 (150)
232 1o6d_A Hypothetical UPF0247 pr 69.5 11 0.00036 23.4 4.7 54 9-76 53-106 (163)
233 1k66_A Phytochrome response re 69.2 13 0.00044 20.9 7.4 55 20-92 61-119 (149)
234 1ns5_A Hypothetical protein YB 69.1 8 0.00027 23.7 4.1 59 12-86 58-116 (155)
235 3etn_A Putative phosphosugar i 68.8 9 0.00031 24.3 4.5 29 50-78 119-149 (220)
236 1tp9_A Peroxiredoxin, PRX D (t 68.7 9.7 0.00033 22.6 4.5 37 51-88 57-94 (162)
237 1qv9_A F420-dependent methylen 67.9 6.7 0.00023 26.1 3.7 41 49-90 76-116 (283)
238 4f82_A Thioredoxin reductase; 67.8 15 0.0005 22.8 5.2 38 51-89 69-107 (176)
239 3jx9_A Putative phosphoheptose 67.5 4.3 0.00015 25.2 2.7 25 51-75 91-116 (170)
240 2yx0_A Radical SAM enzyme; pre 66.5 20 0.00069 24.1 6.2 37 50-87 156-192 (342)
241 1nri_A Hypothetical protein HI 66.4 8 0.00027 26.0 4.1 29 50-78 153-181 (306)
242 2c4n_A Protein NAGD; nucleotid 66.2 2.4 8.3E-05 26.2 1.4 23 46-68 85-107 (250)
243 3uma_A Hypothetical peroxiredo 66.1 9.3 0.00032 23.6 4.1 38 51-89 78-116 (184)
244 3cz5_A Two-component response 66.1 16 0.00055 20.8 7.7 38 54-92 67-106 (153)
245 3ixr_A Bacterioferritin comigr 65.4 13 0.00043 22.5 4.6 38 51-89 72-109 (179)
246 3h1g_A Chemotaxis protein CHEY 65.2 13 0.00044 20.6 4.4 39 53-92 66-108 (129)
247 2jjx_A Uridylate kinase, UMP k 63.7 19 0.00065 23.4 5.4 66 20-89 10-75 (255)
248 2e9y_A Carbamate kinase; trans 63.6 10 0.00035 25.6 4.2 40 50-91 32-71 (316)
249 2z2u_A UPF0026 protein MJ0257; 62.9 13 0.00044 24.6 4.6 36 49-88 141-176 (311)
250 3cg0_A Response regulator rece 62.9 17 0.0006 20.1 6.9 38 54-92 71-109 (140)
251 3eua_A Putative fructose-amino 62.8 14 0.00046 25.1 4.7 28 51-78 88-115 (329)
252 1z9d_A Uridylate kinase, UK, U 62.4 12 0.0004 24.3 4.2 64 22-89 7-70 (252)
253 3grc_A Sensor protein, kinase; 61.9 16 0.00054 20.4 4.4 24 53-76 65-92 (140)
254 2qr3_A Two-component system re 61.8 18 0.00063 20.0 5.7 38 54-92 68-107 (140)
255 3cvj_A Putative phosphoheptose 61.7 7.1 0.00024 25.0 3.1 24 51-74 122-145 (243)
256 3t6k_A Response regulator rece 61.7 19 0.00065 20.2 8.0 63 10-92 39-105 (136)
257 3imk_A Putative molybdenum car 61.7 7.1 0.00024 24.1 2.8 39 26-73 71-109 (158)
258 3eod_A Protein HNR; response r 61.5 18 0.00062 19.8 7.6 63 10-92 42-106 (130)
259 2zj3_A Glucosamine--fructose-6 61.5 14 0.00048 25.4 4.7 29 50-78 120-148 (375)
260 1nm3_A Protein HI0572; hybrid, 61.3 23 0.00079 22.3 5.4 38 51-89 55-93 (241)
261 2poc_A D-fructose-6- PH, isome 61.2 14 0.00049 25.3 4.7 29 50-78 110-138 (367)
262 4dad_A Putative pilus assembly 60.7 20 0.00069 20.1 5.4 38 53-91 82-121 (146)
263 1jx7_A Hypothetical protein YC 60.6 18 0.0006 20.0 4.4 42 24-71 38-79 (117)
264 1j5x_A Glucosamine-6-phosphate 60.3 13 0.00045 25.2 4.3 28 51-78 114-141 (342)
265 3hdg_A Uncharacterized protein 60.0 20 0.00068 19.9 7.3 54 21-92 51-106 (137)
266 2pln_A HP1043, response regula 59.8 18 0.00062 20.1 4.4 38 54-92 74-113 (137)
267 3fj1_A Putative phosphosugar i 59.7 15 0.00052 25.0 4.5 28 51-78 105-132 (344)
268 3mng_A Peroxiredoxin-5, mitoch 59.3 16 0.00054 22.3 4.2 38 51-89 65-103 (173)
269 1zcc_A Glycerophosphodiester p 58.8 18 0.00062 23.3 4.6 36 54-90 184-219 (248)
270 2a1f_A Uridylate kinase; PYRH, 58.5 24 0.00081 22.7 5.2 50 22-74 8-57 (247)
271 2a3n_A Putative glucosamine-fr 58.3 16 0.00056 24.9 4.5 28 51-78 116-143 (355)
272 1i3c_A Response regulator RCP1 58.2 23 0.0008 20.1 8.4 38 54-92 77-118 (149)
273 3hv2_A Response regulator/HD d 58.1 24 0.00081 20.1 7.8 63 10-92 49-114 (153)
274 3fkj_A Putative phosphosugar i 57.6 14 0.00046 25.3 4.0 28 51-78 103-130 (347)
275 2pwj_A Mitochondrial peroxired 57.3 18 0.00061 21.7 4.2 37 51-88 65-102 (171)
276 4g63_A Cytosolic IMP-GMP speci 57.3 5 0.00017 29.0 1.8 17 20-36 15-31 (470)
277 3f6c_A Positive transcription 57.0 22 0.00076 19.5 6.2 39 53-92 61-101 (134)
278 1ibx_B Chimera of IGG binding 56.8 20 0.0007 21.7 4.2 33 3-35 83-116 (145)
279 2him_A L-asparaginase 1; hydro 56.2 13 0.00044 25.8 3.7 24 51-74 271-294 (358)
280 2j07_A Deoxyribodipyrimidine p 56.1 9.9 0.00034 26.8 3.2 43 49-92 50-92 (420)
281 3drn_A Peroxiredoxin, bacterio 55.7 20 0.00069 20.9 4.2 38 51-89 50-87 (161)
282 1ybd_A Uridylate kinase; alpha 55.7 21 0.00073 22.7 4.6 63 22-89 7-70 (239)
283 1o7j_A L-asparaginase; atomic 55.5 13 0.00044 25.4 3.6 27 51-77 257-283 (327)
284 2egx_A Putative acetylglutamat 55.3 16 0.00056 23.9 4.0 37 51-89 15-51 (269)
285 1vd6_A Glycerophosphoryl diest 55.3 23 0.00079 22.4 4.6 35 54-90 176-210 (224)
286 3ks6_A Glycerophosphoryl diest 55.2 21 0.00071 23.0 4.5 35 54-90 194-228 (250)
287 3i42_A Response regulator rece 55.2 24 0.00081 19.2 5.3 49 10-77 38-90 (127)
288 3pnx_A Putative sulfurtransfer 54.9 12 0.00039 23.0 3.0 22 51-72 102-123 (160)
289 3snk_A Response regulator CHEY 54.8 12 0.00043 20.8 3.0 38 54-92 75-114 (135)
290 2we5_A Carbamate kinase 1; arg 54.5 13 0.00046 24.9 3.5 59 24-90 4-66 (310)
291 2otd_A Glycerophosphodiester p 54.4 38 0.0013 21.6 5.6 35 54-90 197-231 (247)
292 2ywr_A Phosphoribosylglycinami 54.2 33 0.0011 21.8 5.2 38 52-90 14-54 (216)
293 3ek6_A Uridylate kinase; UMPK 54.1 28 0.00097 22.5 5.0 50 21-73 8-57 (243)
294 2wlt_A L-asparaginase; hydrola 54.0 14 0.00048 25.3 3.6 26 51-76 258-283 (332)
295 3kto_A Response regulator rece 54.0 26 0.0009 19.4 4.7 39 53-92 67-107 (136)
296 1wsa_A Asparaginase, asparagin 53.9 14 0.00048 25.3 3.6 25 51-75 255-279 (330)
297 1tzb_A Glucose-6-phosphate iso 53.6 14 0.00048 24.6 3.5 25 50-74 92-116 (302)
298 2xvl_A Alpha-xylosidase, putat 53.6 73 0.0025 25.4 7.8 60 9-71 448-510 (1020)
299 3ff4_A Uncharacterized protein 53.5 14 0.00048 21.4 3.1 39 50-89 68-107 (122)
300 3oiz_A Antisigma-factor antago 53.1 13 0.00044 20.4 2.8 56 20-88 42-97 (99)
301 2a4v_A Peroxiredoxin DOT5; yea 53.0 29 0.00099 20.1 4.6 37 51-89 56-92 (159)
302 3qvq_A Phosphodiesterase OLEI0 52.8 26 0.00089 22.6 4.6 35 54-90 200-234 (252)
303 1qkk_A DCTD, C4-dicarboxylate 52.7 30 0.001 19.7 6.1 38 54-92 63-102 (155)
304 1nns_A L-asparaginase II; amid 52.6 15 0.00053 25.0 3.6 25 51-75 251-275 (326)
305 2r25_B Osmosensing histidine p 52.5 26 0.00087 19.5 4.2 38 54-92 68-108 (133)
306 3eul_A Possible nitrate/nitrit 52.5 30 0.001 19.6 7.8 63 10-92 52-116 (152)
307 3ll5_A Gamma-glutamyl kinase r 52.4 21 0.00072 23.2 4.1 62 22-92 3-66 (249)
308 3c8f_A Pyruvate formate-lyase 52.2 28 0.00097 21.6 4.7 25 50-74 83-108 (245)
309 3nwy_A Uridylate kinase; allos 51.9 33 0.0011 22.9 5.1 49 21-73 49-97 (281)
310 3nsx_A Alpha-glucosidase; stru 51.7 60 0.002 24.4 6.9 45 22-71 194-238 (666)
311 1moq_A Glucosamine 6-phosphate 51.5 20 0.00069 24.5 4.1 28 51-78 113-141 (368)
312 1ass_A Thermosome; chaperonin, 51.5 32 0.0011 20.8 4.6 36 53-89 61-96 (159)
313 3lrk_A Alpha-galactosidase 1; 51.5 63 0.0022 23.5 6.7 25 49-73 91-116 (479)
314 3g68_A Putative phosphosugar i 51.3 19 0.00066 24.6 4.0 29 50-78 95-123 (352)
315 1p6q_A CHEY2; chemotaxis, sign 50.8 26 0.00089 19.1 4.0 38 54-92 67-108 (129)
316 2f2h_A Putative family 31 gluc 50.7 57 0.0019 25.0 6.7 24 48-71 323-346 (773)
317 2j4j_A Uridylate kinase; trans 50.5 34 0.0012 21.6 4.9 37 51-89 21-60 (226)
318 3knz_A Putative sugar binding 50.5 20 0.00068 24.7 3.9 28 51-78 111-138 (366)
319 1d4b_A CIDE B, human cell deat 49.7 12 0.00042 22.0 2.4 31 4-36 56-86 (122)
320 3hdv_A Response regulator; PSI 49.4 31 0.0011 19.0 4.8 39 53-92 67-108 (136)
321 2ij9_A Uridylate kinase; struc 49.4 30 0.001 21.7 4.4 36 51-89 20-58 (219)
322 2xry_A Deoxyribodipyrimidine p 49.3 15 0.00051 26.3 3.2 43 49-92 90-132 (482)
323 1p2f_A Response regulator; DRR 49.3 42 0.0014 20.4 7.0 38 54-92 59-98 (220)
324 3hba_A Putative phosphosugar i 48.9 23 0.00078 24.1 4.0 29 50-78 103-131 (334)
325 1srr_A SPO0F, sporulation resp 48.9 30 0.001 18.6 5.0 38 54-92 63-102 (124)
326 1owl_A Photolyase, deoxyribodi 48.7 12 0.00042 26.8 2.8 43 49-92 55-97 (484)
327 3zzh_A Acetylglutamate kinase; 48.7 39 0.0013 22.9 5.1 71 9-93 33-105 (307)
328 3lpp_A Sucrase-isomaltase; gly 48.7 67 0.0023 25.2 6.9 45 22-71 349-393 (898)
329 1kjn_A MTH0777; hypotethical p 48.6 23 0.0008 21.7 3.6 44 43-90 15-58 (157)
330 1agx_A Glutaminase-asparaginas 48.4 18 0.00063 24.7 3.5 25 51-75 255-280 (331)
331 3a24_A Alpha-galactosidase; gl 47.9 27 0.00091 26.3 4.5 39 51-90 347-390 (641)
332 1dbw_A Transcriptional regulat 47.4 33 0.0011 18.6 4.6 38 54-92 63-102 (126)
333 1tmy_A CHEY protein, TMY; chem 47.3 32 0.0011 18.4 4.6 38 54-92 63-102 (120)
334 3q3v_A Phosphoglycerate kinase 47.3 20 0.00068 25.5 3.5 25 50-74 42-68 (403)
335 3no3_A Glycerophosphodiester p 47.1 25 0.00084 22.6 3.8 35 54-90 186-220 (238)
336 1n8j_A AHPC, alkyl hydroperoxi 47.0 38 0.0013 20.4 4.5 35 51-86 51-85 (186)
337 1np7_A DNA photolyase; protein 47.0 11 0.00039 26.9 2.4 43 49-92 63-105 (489)
338 3b2n_A Uncharacterized protein 46.8 35 0.0012 18.8 4.8 38 54-92 65-104 (133)
339 3tbf_A Glucosamine--fructose-6 46.6 22 0.00077 24.5 3.7 28 51-78 115-143 (372)
340 3nxk_A Cytoplasmic L-asparagin 46.5 24 0.00083 24.2 3.8 24 51-74 261-284 (334)
341 2va1_A Uridylate kinase; UMPK, 46.0 49 0.0017 21.4 5.2 64 22-90 24-87 (256)
342 3s6g_A N-acetylglutamate kinas 46.0 29 0.001 24.9 4.3 71 9-93 43-115 (460)
343 1php_A 3-phosphoglycerate kina 45.9 18 0.00061 25.6 3.1 25 50-74 37-63 (394)
344 1zmr_A Phosphoglycerate kinase 45.6 18 0.0006 25.6 3.0 25 50-74 37-63 (387)
345 1gml_A T-complex protein 1 sub 45.6 40 0.0014 20.7 4.5 36 53-89 67-102 (178)
346 3hg3_A Alpha-galactosidase A; 45.6 33 0.0011 24.2 4.5 23 49-71 81-104 (404)
347 2pfu_A Biopolymer transport EX 45.5 13 0.00044 20.2 2.0 12 23-34 22-33 (99)
348 2o55_A Putative glycerophospho 45.5 38 0.0013 21.8 4.5 35 54-90 202-240 (258)
349 1gs5_A Acetylglutamate kinase; 45.4 46 0.0016 21.5 5.0 55 24-90 4-59 (258)
350 1v6s_A Phosphoglycerate kinase 45.3 18 0.00063 25.5 3.1 25 50-74 35-61 (390)
351 1vpe_A Phosphoglycerate kinase 45.2 18 0.00063 25.6 3.1 25 50-74 36-62 (398)
352 1kgs_A DRRD, DNA binding respo 45.2 50 0.0017 20.0 5.9 40 21-77 46-87 (225)
353 3l4y_A Maltase-glucoamylase, i 45.0 93 0.0032 24.4 7.1 58 9-71 305-365 (875)
354 1zq1_A Glutamyl-tRNA(Gln) amid 44.5 21 0.00073 25.5 3.4 22 51-72 344-365 (438)
355 4fey_A Phosphoglycerate kinase 44.5 22 0.00077 25.1 3.4 24 51-74 41-66 (395)
356 2j4d_A Cryptochrome 3, cryptoc 44.5 14 0.00048 26.9 2.5 43 49-92 98-140 (525)
357 3f6p_A Transcriptional regulat 44.2 37 0.0013 18.3 7.2 63 10-92 37-100 (120)
358 3l12_A Putative glycerophospho 44.2 32 0.0011 22.9 4.1 35 54-90 258-292 (313)
359 2xhf_A Peroxiredoxin 5; oxidor 43.7 40 0.0014 20.6 4.2 37 51-88 63-100 (171)
360 1mb3_A Cell division response 43.4 24 0.00082 19.0 3.0 38 54-92 61-102 (124)
361 16pk_A PGK, 3-phosphoglycerate 43.3 20 0.0007 25.5 3.1 25 50-74 36-62 (415)
362 4ab7_A Protein Arg5,6, mitocho 43.0 53 0.0018 23.7 5.3 58 23-94 49-106 (464)
363 2rjn_A Response regulator rece 42.9 45 0.0015 18.8 7.5 49 10-77 42-92 (154)
364 3utn_X Thiosulfate sulfurtrans 42.9 28 0.00097 23.7 3.7 61 22-90 74-141 (327)
365 4pga_A Glutaminase-asparaginas 42.6 22 0.00075 24.5 3.1 23 51-73 261-283 (337)
366 2qzj_A Two-component response 42.5 43 0.0015 18.6 4.4 38 54-92 64-102 (136)
367 2qsj_A DNA-binding response re 42.4 45 0.0015 18.8 4.4 38 54-92 66-105 (154)
368 2bpl_A Glucosamine--fructose-6 42.1 40 0.0014 24.8 4.7 28 51-78 353-381 (608)
369 2d6f_A Glutamyl-tRNA(Gln) amid 41.8 22 0.00075 25.5 3.1 22 51-72 341-362 (435)
370 3n53_A Response regulator rece 41.8 15 0.0005 20.6 1.9 48 10-76 37-88 (140)
371 2ayx_A Sensor kinase protein R 41.7 65 0.0022 20.4 6.6 37 55-92 190-228 (254)
372 2brx_A Uridylate kinase; UMP k 41.6 33 0.0011 22.1 3.8 59 22-89 19-80 (244)
373 3rqi_A Response regulator prot 41.5 54 0.0018 19.4 4.9 38 54-92 67-106 (184)
374 3oqp_A Putative isochorismatas 41.4 21 0.00072 22.6 2.7 54 17-71 2-55 (211)
375 4ba0_A Alpha-glucosidase, puta 41.4 1E+02 0.0035 23.8 6.9 24 48-71 319-342 (817)
376 1sen_A Thioredoxin-like protei 40.5 56 0.0019 19.3 4.6 15 21-35 104-118 (164)
377 3ir9_A Peptide chain release f 40.5 51 0.0017 20.2 4.3 33 53-87 122-154 (166)
378 1mvo_A PHOP response regulator 40.4 45 0.0016 18.2 5.8 38 54-92 63-102 (136)
379 3r0j_A Possible two component 40.3 66 0.0023 20.1 7.2 54 21-92 67-122 (250)
380 3crn_A Response regulator rece 40.3 46 0.0016 18.2 4.9 38 54-92 63-102 (132)
381 3s6k_A Acetylglutamate kinase; 40.3 27 0.00094 25.1 3.4 72 8-93 45-118 (467)
382 2aml_A SIS domain protein; 469 40.0 24 0.00081 24.3 3.0 28 51-78 111-139 (373)
383 3d40_A FOMA protein; fosfomyci 40.0 23 0.0008 23.5 2.9 64 23-90 24-88 (286)
384 4do4_A Alpha-N-acetylgalactosa 40.0 43 0.0015 23.0 4.3 21 51-71 83-103 (400)
385 3top_A Maltase-glucoamylase, i 39.9 78 0.0027 24.9 6.0 57 9-71 306-365 (908)
386 2qs7_A Uncharacterized protein 39.7 18 0.00062 21.4 2.1 22 51-72 85-107 (144)
387 1yio_A Response regulatory pro 39.4 52 0.0018 19.7 4.3 38 54-92 64-103 (208)
388 4gqr_A Pancreatic alpha-amylas 39.4 24 0.00081 24.5 3.0 19 51-69 77-95 (496)
389 3m6m_D Sensory/regulatory prot 39.2 51 0.0017 18.5 8.1 38 54-92 74-117 (143)
390 1jg5_A GTP cyclohydrolase I fe 39.2 26 0.00089 19.0 2.4 22 53-74 52-73 (83)
391 2hqr_A Putative transcriptiona 39.0 51 0.0017 20.1 4.3 38 54-92 56-95 (223)
392 3c3j_A Putative tagatose-6-pho 38.9 37 0.0013 23.4 3.9 33 51-84 117-151 (384)
393 1wn8_A Kalata B3/B6, oantr pro 38.9 18 0.00063 14.9 1.4 15 54-68 10-24 (26)
394 4a7w_A Uridylate kinase; trans 38.3 38 0.0013 21.8 3.7 50 22-74 7-56 (240)
395 1jkx_A GART;, phosphoribosylgl 38.2 73 0.0025 20.2 4.9 36 53-89 14-52 (212)
396 3ec4_A Putative acetyltransfer 38.2 72 0.0025 19.9 4.9 37 53-90 179-215 (228)
397 3fk8_A Disulphide isomerase; A 38.0 31 0.001 19.2 2.9 15 21-35 92-106 (133)
398 3av3_A Phosphoribosylglycinami 37.9 73 0.0025 20.1 4.9 37 53-90 17-56 (212)
399 2vo9_A EAD500, L-alanyl-D-glut 37.7 60 0.002 20.1 4.4 34 51-85 39-72 (179)
400 3ab4_A Aspartokinase; aspartat 37.7 68 0.0023 22.4 5.1 51 24-85 3-53 (421)
401 3ghf_A Septum site-determining 37.6 59 0.002 18.7 6.9 71 4-90 27-99 (120)
402 2pz0_A Glycerophosphoryl diest 37.5 29 0.00098 22.3 3.0 35 54-90 201-235 (252)
403 1dz3_A Stage 0 sporulation pro 37.3 51 0.0017 17.9 4.1 38 54-92 64-104 (130)
404 2pl1_A Transcriptional regulat 37.2 48 0.0016 17.6 7.0 38 54-92 60-99 (121)
405 2pw9_A Putative formate dehydr 37.2 44 0.0015 22.2 3.9 36 53-89 204-239 (268)
406 3gx1_A LIN1832 protein; APC633 37.2 62 0.0021 18.8 7.8 54 5-78 45-99 (130)
407 2q5c_A NTRC family transcripti 37.1 59 0.002 20.2 4.3 37 51-92 129-165 (196)
408 3kcn_A Adenylate cyclase homol 36.8 57 0.002 18.3 7.1 38 54-92 64-104 (151)
409 3d2m_A Putative acetylglutamat 36.7 25 0.00085 24.7 2.8 68 10-92 33-100 (456)
410 3cfy_A Putative LUXO repressor 36.6 55 0.0019 18.1 4.8 38 54-92 64-103 (137)
411 3odp_A Putative tagatose-6-pho 36.6 39 0.0013 23.6 3.7 28 51-78 122-151 (393)
412 1jbe_A Chemotaxis protein CHEY 36.4 52 0.0018 17.7 7.9 38 54-92 65-106 (128)
413 1qpg_A PGK, 3-phosphoglycerate 36.4 27 0.00093 24.9 2.9 25 50-74 39-66 (415)
414 3n7t_A Macrophage binding prot 36.4 87 0.003 20.3 5.6 22 51-72 35-56 (247)
415 3ch0_A Glycerophosphodiester p 36.3 30 0.001 22.4 3.0 35 54-90 226-260 (272)
416 3rfa_A Ribosomal RNA large sub 36.0 44 0.0015 23.6 3.9 34 51-85 186-225 (404)
417 1xhf_A DYE resistance, aerobic 36.0 52 0.0018 17.6 4.8 38 54-92 63-101 (123)
418 3ca8_A Protein YDCF; two domai 35.9 60 0.0021 21.4 4.4 40 51-90 128-170 (266)
419 2wq7_A RE11660P; lyase-DNA com 35.9 17 0.00057 26.6 1.8 43 49-92 87-129 (543)
420 2g3m_A Maltase, alpha-glucosid 35.7 1.2E+02 0.0042 22.8 6.5 59 8-71 189-250 (693)
421 3auf_A Glycinamide ribonucleot 35.5 84 0.0029 20.2 5.0 36 53-89 36-74 (229)
422 2wzb_A Phosphoglycerate kinase 35.0 27 0.00094 24.9 2.7 25 50-74 39-66 (416)
423 2b34_A F35G2.2, MAR1 ribonucle 34.9 35 0.0012 21.3 3.0 44 22-71 15-58 (199)
424 3k4o_A Isopentenyl phosphate k 34.5 22 0.00074 23.4 2.0 39 51-91 33-77 (266)
425 3o65_A Putative ataxin-3-like 34.4 42 0.0014 21.3 3.2 32 53-84 149-180 (191)
426 3vnd_A TSA, tryptophan synthas 34.2 76 0.0026 20.9 4.7 37 49-86 133-171 (267)
427 3kkl_A Probable chaperone prot 34.1 50 0.0017 21.3 3.7 22 51-72 29-50 (244)
428 3cu5_A Two component transcrip 33.9 63 0.0022 18.0 5.8 38 54-92 65-104 (141)
429 1qo0_D AMIR; binding protein, 33.8 75 0.0026 18.8 6.5 36 56-92 69-106 (196)
430 3r8s_F 50S ribosomal protein L 33.6 46 0.0016 20.8 3.3 27 63-89 149-175 (177)
431 1z4e_A Transcriptional regulat 33.5 64 0.0022 17.9 4.3 36 54-90 108-144 (153)
432 1e19_A Carbamate kinase-like c 33.3 49 0.0017 22.2 3.7 35 51-87 31-65 (314)
433 3ph9_A Anterior gradient prote 33.2 77 0.0026 18.7 4.7 42 21-62 101-142 (151)
434 3mcw_A Putative hydrolase; iso 33.1 61 0.0021 20.0 3.9 48 21-71 12-59 (198)
435 2cc0_A Acetyl-xylan esterase; 33.1 28 0.00096 21.4 2.3 23 51-73 163-185 (195)
436 1g94_A Alpha-amylase; beta-alp 33.0 35 0.0012 23.9 3.0 19 51-69 65-83 (448)
437 2oog_A Glycerophosphoryl diest 32.9 37 0.0013 22.3 3.0 35 54-90 231-265 (287)
438 1u3d_A Cryptochrome 1 apoprote 32.9 53 0.0018 23.6 4.0 43 49-92 63-106 (509)
439 3fy4_A 6-4 photolyase; DNA rep 32.9 15 0.00051 26.9 1.1 41 51-92 68-108 (537)
440 2a9o_A Response regulator; ess 32.5 58 0.002 17.1 4.5 38 54-92 61-99 (120)
441 1im5_A 180AA long hypothetical 32.5 78 0.0027 19.1 4.3 47 23-71 5-51 (180)
442 3rst_A Signal peptide peptidas 32.4 41 0.0014 21.6 3.1 51 22-72 3-54 (240)
443 2jk1_A HUPR, hydrogenase trans 32.4 66 0.0022 17.7 4.5 39 54-92 60-100 (139)
444 3i0z_A Putative tagatose-6-pho 32.4 50 0.0017 23.0 3.7 28 51-78 123-152 (389)
445 4iiu_A 3-oxoacyl-[acyl-carrier 32.2 81 0.0028 20.0 4.5 31 54-85 40-70 (267)
446 1j2r_A Hypothetical isochorism 32.2 54 0.0018 20.1 3.6 46 23-71 21-66 (199)
447 2r6o_A Putative diguanylate cy 32.2 59 0.002 21.5 3.9 38 50-89 162-200 (294)
448 1dnp_A DNA photolyase; DNA rep 32.0 17 0.00059 26.0 1.3 43 49-92 54-100 (471)
449 1o1z_A GDPD, glycerophosphodie 31.9 53 0.0018 20.9 3.6 24 54-77 188-211 (234)
450 2pd2_A Hypothetical protein ST 31.4 32 0.0011 18.9 2.2 21 53-73 50-70 (108)
451 3dcp_A Histidinol-phosphatase; 31.4 48 0.0016 21.9 3.3 18 54-71 240-257 (283)
452 4hcj_A THIJ/PFPI domain protei 31.2 53 0.0018 20.1 3.3 23 49-71 86-109 (177)
453 1c9k_A COBU, adenosylcobinamid 31.1 57 0.0019 20.2 3.5 22 52-73 114-135 (180)
454 3ksm_A ABC-type sugar transpor 31.1 43 0.0015 20.9 3.0 20 52-71 72-91 (276)
455 3rjt_A Lipolytic protein G-D-S 31.1 43 0.0015 20.0 2.9 23 49-71 115-137 (216)
456 1w4r_A Thymidine kinase; type 31.1 53 0.0018 20.7 3.3 24 48-71 101-124 (195)
457 2hy5_A Putative sulfurtransfer 31.0 77 0.0026 18.1 4.7 46 21-71 33-79 (130)
458 2d4p_A Hypothetical protein TT 31.0 87 0.003 18.7 5.0 36 54-90 81-117 (141)
459 1a04_A Nitrate/nitrite respons 31.0 89 0.003 18.8 7.9 38 54-92 67-106 (215)
460 3p7x_A Probable thiol peroxida 31.0 51 0.0017 19.2 3.2 37 21-62 129-165 (166)
461 3mz2_A Glycerophosphoryl diest 31.0 1.2E+02 0.004 20.1 5.2 24 51-74 215-238 (292)
462 4aie_A Glucan 1,6-alpha-glucos 30.9 39 0.0013 24.0 3.0 19 51-69 80-98 (549)
463 1wpc_A Glucan 1,4-alpha-maltoh 30.9 39 0.0013 23.9 3.0 19 51-69 83-101 (485)
464 3kzp_A LMO0111 protein, putati 30.8 44 0.0015 20.8 3.0 20 52-71 129-148 (235)
465 3lod_A Putative acyl-COA N-acy 30.8 72 0.0025 17.7 4.4 36 54-90 97-133 (162)
466 3mc3_A DSRE/DSRF-like family p 30.7 50 0.0017 19.1 3.0 44 25-72 51-96 (134)
467 1x52_A Pelota homolog, CGI-17; 30.7 81 0.0028 18.2 4.2 32 53-87 76-107 (124)
468 3bh4_A Alpha-amylase; calcium, 30.7 40 0.0014 23.8 3.0 19 51-69 79-97 (483)
469 2jba_A Phosphate regulon trans 30.6 19 0.00066 19.5 1.2 24 54-77 62-89 (127)
470 1iq4_A 50S ribosomal protein L 30.6 62 0.0021 20.2 3.6 28 62-89 149-176 (179)
471 1jei_A Emerin; membrane protei 30.6 18 0.00061 18.1 0.8 32 54-86 9-40 (53)
472 1ud2_A Amylase, alpha-amylase; 30.6 40 0.0014 23.8 3.0 19 51-69 81-99 (480)
473 3q9s_A DNA-binding response re 30.5 1E+02 0.0035 19.3 7.0 38 54-92 97-135 (249)
474 3mil_A Isoamyl acetate-hydroly 30.5 51 0.0018 20.1 3.3 25 50-74 99-123 (240)
475 3nav_A Tryptophan synthase alp 30.5 95 0.0032 20.5 4.7 36 49-85 135-172 (271)
476 3c3m_A Response regulator rece 30.4 71 0.0024 17.6 3.7 23 54-76 63-89 (138)
477 1zh2_A KDP operon transcriptio 30.3 65 0.0022 17.0 4.3 38 54-92 61-99 (121)
478 3oz7_A Phosphoglycerate kinase 30.3 24 0.00082 25.2 1.8 24 51-74 43-69 (417)
479 2gkg_A Response regulator homo 30.3 66 0.0022 17.0 5.5 36 54-91 66-105 (127)
480 1lwj_A 4-alpha-glucanotransfer 30.1 42 0.0014 23.4 3.0 19 51-69 70-88 (441)
481 1ccw_A Protein (glutamate muta 30.1 58 0.002 18.9 3.3 42 51-92 69-117 (137)
482 3a5v_A Alpha-galactosidase; be 30.1 81 0.0028 21.9 4.5 23 50-72 72-95 (397)
483 2lja_A Putative thiol-disulfid 30.1 76 0.0026 17.7 4.1 36 21-63 109-144 (152)
484 1mji_A 50S ribosomal protein L 30.1 64 0.0022 20.2 3.6 28 62-89 152-179 (182)
485 2guy_A Alpha-amylase A; (beta- 30.0 41 0.0014 23.7 3.0 19 51-69 98-116 (478)
486 1pq4_A Periplasmic binding pro 30.0 1.1E+02 0.0036 20.3 4.9 37 53-89 226-262 (291)
487 1uas_A Alpha-galactosidase; TI 30.0 84 0.0029 21.4 4.5 23 50-72 72-95 (362)
488 2j5v_A Glutamate 5-kinase; pro 29.9 58 0.002 22.5 3.7 49 22-74 4-52 (367)
489 1yac_A Ycacgp, YCAC gene produ 29.8 65 0.0022 20.1 3.7 46 22-71 13-58 (208)
490 2wc7_A Alpha amylase, catalyti 29.6 42 0.0015 23.7 3.0 19 51-69 103-121 (488)
491 2gwr_A DNA-binding response re 29.6 1E+02 0.0035 19.0 5.1 38 54-92 65-103 (238)
492 1xiy_A Peroxiredoxin, pfaop; a 29.6 71 0.0024 19.6 3.7 38 51-89 65-104 (182)
493 2c0d_A Thioredoxin peroxidase 29.5 73 0.0025 20.0 3.9 35 51-86 77-111 (221)
494 2pju_A Propionate catabolism o 29.5 81 0.0028 20.2 4.1 37 51-92 141-177 (225)
495 3qpm_A Peroxiredoxin; oxidored 29.5 87 0.003 19.9 4.3 36 50-86 97-132 (240)
496 3cpt_A Mitogen-activated prote 29.4 40 0.0014 20.4 2.4 32 4-35 21-52 (143)
497 3gi1_A LBP, laminin-binding pr 29.1 1.1E+02 0.0038 20.1 4.9 38 52-89 216-253 (286)
498 2i4r_A V-type ATP synthase sub 29.0 77 0.0026 17.7 3.5 38 51-89 39-77 (102)
499 1mxg_A Alpha amylase; hyperthe 29.0 45 0.0015 23.3 3.0 19 51-69 87-105 (435)
500 1ht6_A AMY1, alpha-amylase iso 28.9 45 0.0016 23.0 3.0 19 51-69 69-87 (405)
No 1
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=99.55 E-value=1.3e-14 Score=92.40 Aligned_cols=74 Identities=38% Similarity=0.686 Sum_probs=59.1
Q ss_pred CCceEEEeCCCCcccccccc---------------cccCCCcccChhHHHHHHHHHHCCCeEEEEeCCC-chhHHHHHHH
Q 034147 21 LPRLVVFDLDYTLWPFYCEC---------------CYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP-APDIAKTFLH 84 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~---------------~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~-~~~i~~~~l~ 84 (103)
.+++++||+|||||+.+... ........++||+.++|++|+++|++++|+||++ ... ++..++
T Consensus 26 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~-~~~~l~ 104 (187)
T 2wm8_A 26 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEG-ANQLLE 104 (187)
T ss_dssp SCSEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHH-HHHHHH
T ss_pred ccCEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHH-HHHHHH
Confidence 47899999999999643210 0112345689999999999999999999999998 577 699999
Q ss_pred HcCCCCccccCee
Q 034147 85 KLGIHSMFVPMVR 97 (103)
Q Consensus 85 ~~~l~~~~~~~~i 97 (103)
.+++..+| +.+
T Consensus 105 ~~gl~~~f--~~~ 115 (187)
T 2wm8_A 105 LFDLFRYF--VHR 115 (187)
T ss_dssp HTTCTTTE--EEE
T ss_pred HcCcHhhc--cee
Confidence 99999888 554
No 2
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=99.53 E-value=5.6e-14 Score=89.65 Aligned_cols=77 Identities=23% Similarity=0.187 Sum_probs=62.4
Q ss_pred CceEEEeCCCCcccccc-----cccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCc---hhHHHHHHHHcCCCCccc
Q 034147 22 PRLVVFDLDYTLWPFYC-----ECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---PDIAKTFLHKLGIHSMFV 93 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~-----~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~---~~i~~~~l~~~~l~~~~~ 93 (103)
+++++||+||||++... ..........++||+.++|++|+++|++++|+||++. .. +...++++|+..+|
T Consensus 3 ik~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~-~~~~l~~~gl~~~f- 80 (189)
T 3ib6_A 3 LTHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEV-IKRVLTNFGIIDYF- 80 (189)
T ss_dssp CCEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHH-HHHHHHHTTCGGGE-
T ss_pred ceEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHH-HHHHHHhcCchhhe-
Confidence 78999999999977221 0112223467999999999999999999999999886 66 58999999999999
Q ss_pred cCeeeecc
Q 034147 94 PMVRLSCC 101 (103)
Q Consensus 94 ~~~i~~~~ 101 (103)
+.+++++
T Consensus 81 -d~i~~~~ 87 (189)
T 3ib6_A 81 -DFIYASN 87 (189)
T ss_dssp -EEEEECC
T ss_pred -EEEEEcc
Confidence 8888765
No 3
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=99.53 E-value=8.9e-15 Score=87.96 Aligned_cols=66 Identities=17% Similarity=0.112 Sum_probs=58.1
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeec
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~ 100 (103)
+++++||+||||++ ...++|++.++|++|+++|++++++||++... ++..++++++..+| +.++++
T Consensus 2 ~k~i~~D~DgtL~~----------~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~-~~~~l~~~~l~~~f--~~i~~~ 67 (137)
T 2pr7_A 2 MRGLIVDYAGVLDG----------TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGL-GAAPIRELETNGVV--DKVLLS 67 (137)
T ss_dssp CCEEEECSTTTTSS----------CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGG-GGHHHHHHHHTTSS--SEEEEH
T ss_pred CcEEEEeccceecC----------CCccCccHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHCChHhhc--cEEEEe
Confidence 57899999999975 35688999999999999999999999999888 58889999998888 777765
No 4
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=99.52 E-value=1.8e-14 Score=92.59 Aligned_cols=53 Identities=26% Similarity=0.288 Sum_probs=47.8
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
..++||+.++++.|+++|++++++||++... +...++.+++.++| +.+++++.
T Consensus 83 ~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~-~~~~l~~~~l~~~f--d~~~~~~~ 135 (216)
T 3kbb_A 83 LKENPGVREALEFVKSKRIKLALATSTPQRE-ALERLRRLDLEKYF--DVMVFGDQ 135 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCGGGC--SEEECGGG
T ss_pred cccCccHHHHHHHHHHcCCCcccccCCcHHH-HHHHHHhcCCCccc--cccccccc
Confidence 4688999999999999999999999999888 69999999999999 88887753
No 5
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=99.49 E-value=9e-14 Score=87.52 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=51.9
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCc---------------hhHHHHHHHHc
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---------------PDIAKTFLHKL 86 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~---------------~~i~~~~l~~~ 86 (103)
+|+++||+||||++....+.......+++||+.++|++|+++|++++|+||++. .. +...++++
T Consensus 1 ~k~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 79 (179)
T 3l8h_A 1 MKLIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDK-MHRALAQM 79 (179)
T ss_dssp CCEEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHH-HHHHHHHT
T ss_pred CCEEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHH-HHHHHHhC
Confidence 478999999999974322223334567899999999999999999999999986 45 47778888
Q ss_pred C
Q 034147 87 G 87 (103)
Q Consensus 87 ~ 87 (103)
|
T Consensus 80 g 80 (179)
T 3l8h_A 80 G 80 (179)
T ss_dssp T
T ss_pred C
Confidence 8
No 6
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=99.46 E-value=7.7e-14 Score=89.13 Aligned_cols=81 Identities=20% Similarity=0.171 Sum_probs=63.8
Q ss_pred CCCceEEEeCCCCccccccccc--------------------------------------ccCCCcccChhHHHHHHHHH
Q 034147 20 NLPRLVVFDLDYTLWPFYCECC--------------------------------------YEDEIPYLYPHAKGILEALK 61 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~--------------------------------------~~~~~~~~~~g~~~~l~~l~ 61 (103)
..+++++||+||||++....+. .......++|++.++++.|+
T Consensus 4 ~~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 83 (205)
T 3m9l_A 4 SEIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLLEHERDLAQGSRPAPGAVELVRELA 83 (205)
T ss_dssp GGCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHHHHHHHHHHHHHTHHHHEEEEEECTTHHHHHHHHH
T ss_pred ccCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHH
Confidence 3579999999999998543321 01223468899999999999
Q ss_pred HCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 62 EKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 62 ~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
++|++++++|+++... ++..++.+++..+|..+.+++++
T Consensus 84 ~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f~~~~i~~~~ 122 (205)
T 3m9l_A 84 GRGYRLGILTRNAREL-AHVTLEAIGLADCFAEADVLGRD 122 (205)
T ss_dssp HTTCEEEEECSSCHHH-HHHHHHHTTCGGGSCGGGEECTT
T ss_pred hcCCeEEEEeCCchHH-HHHHHHHcCchhhcCcceEEeCC
Confidence 9999999999999887 69999999998888544566654
No 7
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=99.46 E-value=1.8e-13 Score=91.90 Aligned_cols=81 Identities=16% Similarity=0.063 Sum_probs=59.3
Q ss_pred cCCCCceEEEeCCCCccccccccc-------cc---------CCCcccChhHHHHHHHHHHCCCeEEEEeCCC---chhH
Q 034147 18 FENLPRLVVFDLDYTLWPFYCECC-------YE---------DEIPYLYPHAKGILEALKEKGIHVAVASRSP---APDI 78 (103)
Q Consensus 18 ~~~~~~~~~fD~DGTL~~~~~~~~-------~~---------~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~---~~~i 78 (103)
....+++++||+||||++...++. .. .....++||+.++|+.|+++|++++|+||++ ...
T Consensus 55 ~~~~~kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~- 133 (258)
T 2i33_A 55 GTEKKPAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDA- 133 (258)
T ss_dssp CCSSEEEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHH-
T ss_pred cCCCCCEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHH-
Confidence 345689999999999998531100 00 0125688999999999999999999999998 445
Q ss_pred HHHHHHHcCCC--CccccCeeeecc
Q 034147 79 AKTFLHKLGIH--SMFVPMVRLSCC 101 (103)
Q Consensus 79 ~~~~l~~~~l~--~~~~~~~i~~~~ 101 (103)
+...++.+|+. .++ +.+++++
T Consensus 134 ~~~~L~~~Gl~~v~~~--~vi~~~~ 156 (258)
T 2i33_A 134 TIKNLERVGAPQATKE--HILLQDP 156 (258)
T ss_dssp HHHHHHHHTCSSCSTT--TEEEECT
T ss_pred HHHHHHHcCCCcCCCc--eEEECCC
Confidence 46778889997 555 5555543
No 8
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=99.43 E-value=2.8e-13 Score=87.33 Aligned_cols=75 Identities=20% Similarity=0.214 Sum_probs=51.4
Q ss_pred CCCCceEEEeCCCCcccccccccc----cCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcccc
Q 034147 19 ENLPRLVVFDLDYTLWPFYCECCY----EDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVP 94 (103)
Q Consensus 19 ~~~~~~~~fD~DGTL~~~~~~~~~----~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~ 94 (103)
...+++++||+||||++....... ......++||+.++|++|+++|++++|+||++... +.... + .+|
T Consensus 3 ~~~~kav~fDlDGTL~d~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~-~~~~~---~--~~~-- 74 (196)
T 2oda_A 3 LPTFPALLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEAL-STPLA---A--PVN-- 74 (196)
T ss_dssp --CCSCEEEETBTTTBCTTSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHH-HHHHH---T--TTT--
T ss_pred CCcCCEEEEcCCCceEeccccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHH-HHHhc---C--ccC--
Confidence 345799999999999983210000 01234689999999999999999999999998766 33332 2 344
Q ss_pred Ceeeecc
Q 034147 95 MVRLSCC 101 (103)
Q Consensus 95 ~~i~~~~ 101 (103)
+.+++++
T Consensus 75 d~v~~~~ 81 (196)
T 2oda_A 75 DWMIAAP 81 (196)
T ss_dssp TTCEECC
T ss_pred CEEEECC
Confidence 5566554
No 9
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=99.43 E-value=5.8e-13 Score=86.36 Aligned_cols=68 Identities=13% Similarity=-0.010 Sum_probs=53.9
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCC---------------chhHHHHHHH
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP---------------APDIAKTFLH 84 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~---------------~~~i~~~~l~ 84 (103)
+.+++++||+||||++...+ ........++||+.++|++|+++|++++|+||++ ... +...++
T Consensus 23 ~~~k~v~~D~DGTL~~~~~~-~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~-~~~~l~ 100 (211)
T 2gmw_A 23 KSVPAIFLDRDGTINVDHGY-VHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEW-MDWSLA 100 (211)
T ss_dssp -CBCEEEECSBTTTBCCCSS-CCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHH-HHHHHH
T ss_pred hcCCEEEEcCCCCeECCCCc-ccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHH-HHHHHH
Confidence 34789999999999974311 1122345789999999999999999999999999 356 588899
Q ss_pred HcCCC
Q 034147 85 KLGIH 89 (103)
Q Consensus 85 ~~~l~ 89 (103)
.+|+.
T Consensus 101 ~~gl~ 105 (211)
T 2gmw_A 101 DRDVD 105 (211)
T ss_dssp HTTCC
T ss_pred HcCCc
Confidence 99986
No 10
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=99.43 E-value=4.2e-13 Score=89.12 Aligned_cols=66 Identities=17% Similarity=0.046 Sum_probs=52.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeC---CCchhHHHHHHHHcCCCCccccCee
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR---SPAPDIAKTFLHKLGIHSMFVPMVR 97 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~---~~~~~i~~~~l~~~~l~~~~~~~~i 97 (103)
.+|+++||+||||++. ..+.|++.++|++++++|++++++|| ++... ....++.+|+.... +.+
T Consensus 7 ~~kli~~DlDGTLl~~----------~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~-~~~~l~~lg~~~~~--~~i 73 (268)
T 3qgm_A 7 DKKGYIIDIDGVIGKS----------VTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRI-LLERLRSFGLEVGE--DEI 73 (268)
T ss_dssp CCSEEEEECBTTTEET----------TEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHH-HHHHHHHTTCCCCG--GGE
T ss_pred cCCEEEEcCcCcEECC----------CEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHH-HHHHHHHCCCCCCH--HHe
Confidence 4899999999999973 23668999999999999999999999 55566 36778888886443 455
Q ss_pred ee
Q 034147 98 LS 99 (103)
Q Consensus 98 ~~ 99 (103)
++
T Consensus 74 i~ 75 (268)
T 3qgm_A 74 LV 75 (268)
T ss_dssp EE
T ss_pred eC
Confidence 54
No 11
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=99.42 E-value=2.7e-13 Score=86.03 Aligned_cols=72 Identities=22% Similarity=0.169 Sum_probs=55.9
Q ss_pred CCCceEEEeCCCCcccccccccccCCC-cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEI-PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~-~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+.+++++||+||||++....+...... ..+.+...++|++|+++|++++++||++... +...++++++..+|
T Consensus 6 ~~ik~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~-~~~~~~~lgl~~~~ 78 (180)
T 1k1e_A 6 ENIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPI-LRRRIADLGIKLFF 78 (180)
T ss_dssp GGCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHH-HHHHHHHHTCCEEE
T ss_pred hCCeEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHH-HHHHHHHcCCceee
Confidence 357999999999999853222211111 1345678899999999999999999999888 69999999998766
No 12
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=99.40 E-value=4.7e-13 Score=86.16 Aligned_cols=53 Identities=17% Similarity=0.122 Sum_probs=47.2
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
..++|++.++++.|++.|++++++|+++... +...++++++..+| +.+++++.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 142 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDT-ATINLKALKLDINK--INIVTRDD 142 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHH-HHHHHHTTTCCTTS--SCEECGGG
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhh-HHHHHHhcchhhhh--heeecccc
Confidence 5788999999999999999999999999887 59999999999988 77877653
No 13
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=99.40 E-value=1.5e-12 Score=83.79 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=47.6
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
...++|++.++++.|+++|++++++|+++... +...++.+++..+| +.+++++.
T Consensus 94 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 147 (230)
T 3um9_A 94 SLTPFADVPQALQQLRAAGLKTAILSNGSRHS-IRQVVGNSGLTNSF--DHLISVDE 147 (230)
T ss_dssp SCCBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHTCGGGC--SEEEEGGG
T ss_pred cCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHH-HHHHHHHCCChhhc--ceeEehhh
Confidence 45678999999999999999999999999887 58999999999988 88887753
No 14
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=99.40 E-value=3.6e-13 Score=87.28 Aligned_cols=55 Identities=20% Similarity=0.225 Sum_probs=48.4
Q ss_pred CCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 45 EIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 45 ~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
....++|++.++++.|+++|++++++|++.... ++..++++++..+| +.+++++.
T Consensus 101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 155 (237)
T 4ex6_A 101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKA-ARAIAELTGLDTRL--TVIAGDDS 155 (237)
T ss_dssp GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHH-HHHHHHHHTGGGTC--SEEECTTT
T ss_pred cCCccCCCHHHHHHHHHhCCCcEEEEcCCChHH-HHHHHHHcCchhhe--eeEEeCCC
Confidence 345689999999999999999999999999887 59999999999999 88887764
No 15
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=99.40 E-value=7e-13 Score=83.98 Aligned_cols=52 Identities=23% Similarity=0.365 Sum_probs=46.9
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
.++|++.++++.|+++|++++++|+++... ++..++++++..+| +.+++++.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 140 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKAD-IFRALEENRLQGFF--DIVLSGEE 140 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCGGGC--SEEEEGGG
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHH-HHHHHHHcCcHhhe--eeEeeccc
Confidence 688999999999999999999999999887 59999999999999 88887653
No 16
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.40 E-value=3e-13 Score=87.05 Aligned_cols=51 Identities=20% Similarity=0.336 Sum_probs=45.4
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++||+.++|+.|++ |++++++||++... ++..++++|+..+| +.+++++
T Consensus 83 ~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~-~~~~l~~~gl~~~f--~~i~~~~ 133 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSS-SYPLYITTTKDTST-AQDMAKNLEIHHFF--DGIYGSS 133 (210)
T ss_dssp CEECTTHHHHHHHHHT-TSCEEEEEEEEHHH-HHHHHHHTTCGGGC--SEEEEEC
T ss_pred CCCCCCHHHHHHHHHc-CCeEEEEeCCCHHH-HHHHHHhcCchhhe--eeeecCC
Confidence 4678999999999999 99999999999777 58899999999999 8888764
No 17
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=99.39 E-value=5.4e-13 Score=85.77 Aligned_cols=53 Identities=23% Similarity=0.397 Sum_probs=47.4
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
..++|++.++++.|+++|++++++|++.... ++..++.+++..+| +.+++++.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 137 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVF-SKQILEHFKLAFYF--DAIVGSSL 137 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHH-HHHHHHHTTCGGGC--SEEEEECT
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHhCCHhhe--eeeeccCC
Confidence 4688999999999999999999999999887 59999999999999 88887654
No 18
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=99.38 E-value=5.8e-13 Score=82.73 Aligned_cols=71 Identities=23% Similarity=0.210 Sum_probs=55.4
Q ss_pred CCceEEEeCCCCcccccccccccCC-CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDE-IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~-~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.+++++||+||||++.......... ...+.|+..++|++|+++|++++++||++... ++..++++++..+|
T Consensus 8 ~~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~l~~~gl~~~~ 79 (162)
T 2p9j_A 8 KLKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAP-LITRLKELGVEEIY 79 (162)
T ss_dssp HCCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHH-HHHHHHHTTCCEEE
T ss_pred ceeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHH-HHHHHHHcCCHhhc
Confidence 3789999999999975322211111 12345778999999999999999999999888 69999999987766
No 19
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.38 E-value=6.6e-13 Score=88.17 Aligned_cols=66 Identities=15% Similarity=0.128 Sum_probs=51.7
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeC---CCchhHHHHHHHHcCCCCccccCee
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR---SPAPDIAKTFLHKLGIHSMFVPMVR 97 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~---~~~~~i~~~~l~~~~l~~~~~~~~i 97 (103)
++|+++||+||||++. ..+.|++.++|++++++|++++++|| ++... ....++.+|+.... +.+
T Consensus 5 ~~kli~~DlDGTLl~~----------~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~-~~~~l~~lg~~~~~--~~i 71 (266)
T 3pdw_A 5 TYKGYLIDLDGTMYNG----------TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQ-VADKLVSFDIPATE--EQV 71 (266)
T ss_dssp CCSEEEEECSSSTTCH----------HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHH-HHHHHHHTTCCCCG--GGE
T ss_pred cCCEEEEeCcCceEeC----------CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHH-HHHHHHHcCCCCCH--HHc
Confidence 5899999999999972 23568999999999999999999998 55555 36778888886433 444
Q ss_pred ee
Q 034147 98 LS 99 (103)
Q Consensus 98 ~~ 99 (103)
++
T Consensus 72 i~ 73 (266)
T 3pdw_A 72 FT 73 (266)
T ss_dssp EE
T ss_pred cC
Confidence 43
No 20
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=99.37 E-value=2.4e-12 Score=83.56 Aligned_cols=54 Identities=17% Similarity=0.209 Sum_probs=42.1
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
...++|++.++++.|+++|++++++||++... +...+++ ++..+|..+.+++++
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~-~l~~~f~~~~~~~~~ 159 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTS-LLDRLNH-NFPGIFQANLMVTAF 159 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC----CHHHHHH-HSTTTCCGGGEECGG
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHH-HHHHHHh-hHHHhcCCCeEEecc
Confidence 35688999999999999999999999999877 4788888 988888444566554
No 21
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=99.37 E-value=1.4e-12 Score=84.96 Aligned_cols=52 Identities=27% Similarity=0.238 Sum_probs=46.1
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
.++||+.+++++|+++|++++++||++... +...++++|+..+| +.+++++.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 156 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEM-LQAALKASKLDRVL--DSCLSADD 156 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCGGGC--SEEEEGGG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHhcCcHHHc--CEEEEccc
Confidence 467999999999999999999999999877 58999999999988 88887653
No 22
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=99.37 E-value=1.9e-12 Score=80.07 Aligned_cols=63 Identities=17% Similarity=0.133 Sum_probs=49.4
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCC---chhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP---APDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~---~~~i~~~~l~~~~l~~ 90 (103)
+++++||+||||++. .......+.|++.++|++++++|+.++++||++ ... +...++.+++..
T Consensus 3 ~k~i~~DlDGTL~~~-----~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~-~~~~l~~~gi~~ 68 (142)
T 2obb_A 3 AMTIAVDFDGTIVEH-----RYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDE-AIEWCRARGLEF 68 (142)
T ss_dssp CCEEEECCBTTTBCS-----CTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHH-HHHHHHTTTCCC
T ss_pred CeEEEEECcCCCCCC-----CCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHH-HHHHHHHcCCCe
Confidence 678999999999983 222233456899999999999999999999998 445 466677777754
No 23
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=99.37 E-value=1e-12 Score=83.28 Aligned_cols=53 Identities=26% Similarity=0.288 Sum_probs=47.5
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
..++|++.++++.|+++|++++++|+++... +...++++++..+| +.+++++.
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~~~~~f--~~~~~~~~ 135 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQRE-ALERLRRLDLEKYF--DVMVFGDQ 135 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCGGGC--SEEECGGG
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHh-HHHHHHhcChHHhc--CEEeeccc
Confidence 5788999999999999999999999999887 59999999999999 88877653
No 24
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=99.37 E-value=1.3e-12 Score=84.61 Aligned_cols=54 Identities=30% Similarity=0.313 Sum_probs=47.4
Q ss_pred CCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 45 EIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 45 ~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
....++||+.++|+.|+++|++++++||++... ++..++++++..+| +.+++++
T Consensus 80 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~gl~~~f--~~i~~~~ 133 (222)
T 2nyv_A 80 VYTKPYPEIPYTLEALKSKGFKLAVVSNKLEEL-SKKILDILNLSGYF--DLIVGGD 133 (222)
T ss_dssp SSCEECTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCGGGC--SEEECTT
T ss_pred ccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHH-HHHHHHHcCCHHHh--eEEEecC
Confidence 345689999999999999999999999999777 58899999998888 7887764
No 25
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=99.36 E-value=1.4e-12 Score=84.29 Aligned_cols=51 Identities=20% Similarity=0.296 Sum_probs=45.6
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
.++|++.++++.|+++|++++++||++... +...++++++..+| +.+++++
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f--~~~~~~~ 145 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQS-IDAVVSHAGLRDGF--DHLLSVD 145 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCGGGC--SEEEESG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHhcChHhhh--heEEEec
Confidence 577999999999999999999999999877 58899999999888 8887765
No 26
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=99.36 E-value=2.4e-12 Score=85.86 Aligned_cols=52 Identities=19% Similarity=0.159 Sum_probs=46.5
Q ss_pred cccChhHHHHHHHHHHCCC--eEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGI--HVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~--~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++|+.|+++|+ +++++||++... +...++.+++..+| +.+++++
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~-~~~~l~~~gl~~~f--d~v~~~~ 194 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNH-AIRCLRLLGIADLF--DGLTYCD 194 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHH-HHHHHHHHTCTTSC--SEEECCC
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHH-HHHHHHhCCccccc--ceEEEec
Confidence 5689999999999999999 999999999887 59999999999999 8877654
No 27
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=99.36 E-value=2.4e-12 Score=83.15 Aligned_cols=53 Identities=21% Similarity=0.243 Sum_probs=47.4
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
...++|++.++++.|+++|++++++||++... +...++.+++..+| +.+++++
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~l~~~gl~~~f--~~i~~~~ 153 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSNKNGER-LRSEIHHKNLTHYF--DSIIGSG 153 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHTTCGGGC--SEEEEET
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEECCCHHH-HHHHHHHCCchhhe--eeEEccc
Confidence 45688999999999999999999999999887 59999999999988 8887765
No 28
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=99.36 E-value=1.9e-12 Score=85.21 Aligned_cols=51 Identities=25% Similarity=0.337 Sum_probs=43.8
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
..++||+.++++.|+++|++++++|++.. +...++++|+..+| +.+++++.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~---~~~~l~~~gl~~~f--d~i~~~~~ 144 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN---APTILAALELREFF--TFCADASQ 144 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT---HHHHHHHTTCGGGC--SEECCGGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc---hhhhhhhhhhcccc--cccccccc
Confidence 35789999999999999999999998764 36678999999999 88888763
No 29
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=99.35 E-value=1.2e-12 Score=85.12 Aligned_cols=53 Identities=28% Similarity=0.347 Sum_probs=47.4
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
..++|++.++++.|+++|++++++|+++... ++..++.+++..+| +.+++++.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 161 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVF-AETILRYFDIDRYF--KYIAGSNL 161 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHTTCGGGC--SEEEEECT
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHH-HHHHHHHcCcHhhE--EEEEeccc
Confidence 4689999999999999999999999998887 59999999999999 88887764
No 30
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=99.35 E-value=2.4e-12 Score=84.98 Aligned_cols=52 Identities=23% Similarity=0.313 Sum_probs=43.5
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
...++||+.++++.|+++|++++++|++. . +...++++|+.++| +.|++++.
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~-~~~~L~~~gl~~~F--d~i~~~~~ 165 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--N-AINVLNHLGISDKF--DFIADAGK 165 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--T-HHHHHHHHTCGGGC--SEECCGGG
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--h-hhhHhhhccccccc--ceeecccc
Confidence 34578999999999999999999877665 3 36679999999999 88888763
No 31
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=99.34 E-value=3.6e-12 Score=83.68 Aligned_cols=52 Identities=35% Similarity=0.544 Sum_probs=45.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++||+.++|+.|+++|++++++|+++... ++..++++++..+| +.+++++
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~gl~~~f--~~~~~~~ 164 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKH-VQPILTAFGIDHLF--SEMLGGQ 164 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCGGGC--SEEECTT
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHH-HHHHHHHcCchheE--EEEEecc
Confidence 4577999999999999999999999999777 69999999998888 7777765
No 32
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=99.34 E-value=2.7e-12 Score=81.31 Aligned_cols=74 Identities=16% Similarity=0.090 Sum_probs=57.0
Q ss_pred CCCceEEEeCCCCcccccc--cccccCCCcccChhHHHHHHHHHHCCCeEEEEeCC---------------CchhHHHHH
Q 034147 20 NLPRLVVFDLDYTLWPFYC--ECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS---------------PAPDIAKTF 82 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~--~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~---------------~~~~i~~~~ 82 (103)
+.+++++||+||||++..+ ..........++||+.++|++|+++|++++|+||+ .... +...
T Consensus 12 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~~ 90 (176)
T 2fpr_A 12 SSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNL-MMQI 90 (176)
T ss_dssp -CCEEEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHH-HHHH
T ss_pred CcCcEEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHH-HHHH
Confidence 4589999999999997421 11222335678999999999999999999999998 4455 5888
Q ss_pred HHHcCCCCccccCeee
Q 034147 83 LHKLGIHSMFVPMVRL 98 (103)
Q Consensus 83 l~~~~l~~~~~~~~i~ 98 (103)
++.+++. | +.++
T Consensus 91 l~~~gl~--f--d~v~ 102 (176)
T 2fpr_A 91 FTSQGVQ--F--DEVL 102 (176)
T ss_dssp HHHTTCC--E--EEEE
T ss_pred HHHcCCC--e--eEEE
Confidence 9999986 5 6665
No 33
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=99.33 E-value=2.1e-12 Score=85.85 Aligned_cols=66 Identities=18% Similarity=0.263 Sum_probs=51.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe---CCCchhHHHHHHHHcCCCCccccCee
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS---RSPAPDIAKTFLHKLGIHSMFVPMVR 97 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T---~~~~~~i~~~~l~~~~l~~~~~~~~i 97 (103)
++|+++||+||||++. ....|++.++|++++++|++++++| +++... ....++.+|+.... +.+
T Consensus 4 ~~kli~~DlDGTLl~~----------~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~-~~~~l~~lg~~~~~--~~i 70 (264)
T 3epr_A 4 AYKGYLIDLDGTIYKG----------KSRIPAGERFIERLQEKGIPYMLVTNNTTRTPES-VQEMLRGFNVETPL--ETI 70 (264)
T ss_dssp CCCEEEECCBTTTEET----------TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHH-HHHHHHTTTCCCCG--GGE
T ss_pred CCCEEEEeCCCceEeC----------CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHH-HHHHHHHCCCCCCh--hhe
Confidence 4899999999999983 2334899999999999999999999 555566 47778888876433 445
Q ss_pred ee
Q 034147 98 LS 99 (103)
Q Consensus 98 ~~ 99 (103)
++
T Consensus 71 i~ 72 (264)
T 3epr_A 71 YT 72 (264)
T ss_dssp EE
T ss_pred ec
Confidence 44
No 34
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=99.32 E-value=1e-12 Score=84.09 Aligned_cols=49 Identities=24% Similarity=0.237 Sum_probs=43.5
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeee
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRL 98 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~ 98 (103)
..++|++.++++.|+++|++++++||++... ++..++.+++..+| +.++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~-~~~~l~~~gl~~~f--~~~~ 122 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLA-TNHYRDLLHLDAAF--SNTL 122 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHH-HHHHHHHHTCSEEE--EEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhH-HHHHHHHcCcchhc--ccee
Confidence 5689999999999999999999999999887 59999999998888 5554
No 35
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=99.32 E-value=3.9e-12 Score=79.07 Aligned_cols=72 Identities=14% Similarity=0.015 Sum_probs=52.6
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcc-cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPY-LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~-~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+.+++++||+||||++....+........ .......++++|+++|++++++||++... ++..++++++..+|
T Consensus 2 ~~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~~~~~gl~~~~ 74 (164)
T 3e8m_A 2 KEIKLILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEI-VRRRAEKLKVDYLF 74 (164)
T ss_dssp CCCCEEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHTTCCEEEECSSCCHH-HHHHHHHTTCSEEE
T ss_pred CcceEEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHCCCEEEEEeCCChHH-HHHHHHHcCCCEee
Confidence 35789999999999985432222221111 11122347999999999999999999888 69999999998776
No 36
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=99.31 E-value=1.2e-12 Score=86.06 Aligned_cols=54 Identities=19% Similarity=0.089 Sum_probs=47.0
Q ss_pred CCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCe-eeecc
Q 034147 45 EIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMV-RLSCC 101 (103)
Q Consensus 45 ~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~-i~~~~ 101 (103)
....++|++.++++.|+++|++++++|+++... ++..++.+++..+| +. +++++
T Consensus 107 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~l~~~~l~~~f--~~~i~~~~ 161 (259)
T 4eek_A 107 TGVTAIEGAAETLRALRAAGVPFAIGSNSERGR-LHLKLRVAGLTELA--GEHIYDPS 161 (259)
T ss_dssp TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHH-HHHHHHHTTCHHHH--CSCEECGG
T ss_pred ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHhcChHhhc--cceEEeHh
Confidence 345789999999999999999999999999877 59999999998888 77 77664
No 37
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=99.31 E-value=4.2e-12 Score=82.29 Aligned_cols=44 Identities=11% Similarity=0.151 Sum_probs=40.0
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++||+.++|++|+++|++++|+||++... ++..++++|+..++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~-~~~~~~~~g~~~~~ 135 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFV-TAPIARAFGVQHLI 135 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCCEEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCCEEE
Confidence 569999999999999999999999999887 69999999997655
No 38
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=99.31 E-value=4.5e-12 Score=81.74 Aligned_cols=53 Identities=19% Similarity=0.282 Sum_probs=46.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
..++|++.++++.|+++|++++++||++... +...++++++..+| +.+++++.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 150 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQM-LEIAVKSAGMSGLF--DHVLSVDA 150 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHH-HHHHHHTTTCTTTC--SEEEEGGG
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHH-HHHHHHHCCcHhhc--CEEEEecc
Confidence 4578999999999999999999999999877 58899999999999 88887653
No 39
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=99.30 E-value=4.5e-12 Score=82.63 Aligned_cols=54 Identities=19% Similarity=0.183 Sum_probs=44.9
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
...++|++.++++.|+++|++++++|+++... +...++. ++..+|..+.+++++
T Consensus 107 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~-~l~~~f~~d~i~~~~ 160 (243)
T 3qxg_A 107 EAERMPGAWELLQKVKSEGLTPMVVTGSGQLS-LLERLEH-NFPGMFHKELMVTAF 160 (243)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECCCCCHH-HHTTHHH-HSTTTCCGGGEECTT
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHH-HHHHHHH-hHHHhcCcceEEeHH
Confidence 35688999999999999999999999999877 5888888 988888544566654
No 40
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=99.30 E-value=5.8e-12 Score=84.63 Aligned_cols=62 Identities=32% Similarity=0.369 Sum_probs=52.1
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~ 91 (103)
..+|+++||+||||++. ...+.+.+.++|++++++|++++++||++... +...++.+++..+
T Consensus 19 ~~~kli~~DlDGTLl~~---------~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~-~~~~~~~l~~~~~ 80 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLSP---------DHFLTPYAKETLKLLTARGINFVFATGRHYID-VGQIRDNLGIRSY 80 (285)
T ss_dssp --CCEEEEECCCCCSCT---------TSCCCHHHHHHHHHHHTTTCEEEEECSSCGGG-GHHHHHHHCSCCE
T ss_pred CcceEEEEeCcCCCCCC---------CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHhcCCCcc
Confidence 35899999999999973 12356889999999999999999999999988 4889999998643
No 41
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.30 E-value=6e-12 Score=80.49 Aligned_cols=71 Identities=20% Similarity=0.163 Sum_probs=52.9
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccC-hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLY-PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~-~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.+++++||+||||+++...+.........+ ..-..+|++|+++|++++|+||++... ++..++++|+.++|
T Consensus 18 ~ik~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~~~~lgl~~~f 89 (189)
T 3mn1_A 18 AIKLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIASGVTTAIISGRKTAI-VERRAKSLGIEHLF 89 (189)
T ss_dssp TCCEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHHHTCSEEE
T ss_pred hCCEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHCCCEEEEEECcChHH-HHHHHHHcCCHHHh
Confidence 578999999999999643322222211111 111238999999999999999999888 69999999998877
No 42
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=99.29 E-value=1.4e-11 Score=82.80 Aligned_cols=59 Identities=22% Similarity=0.434 Sum_probs=51.0
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+|+++||+||||++. . ..+.+...++|++++++|++++++|||+... +...++.+++..
T Consensus 5 ~kli~~DlDGTLl~~------~---~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~-~~~~~~~l~l~~ 63 (282)
T 1rkq_A 5 IKLIAIDMDGTLLLP------D---HTISPAVKNAIAAARARGVNVVLTTGRPYAG-VHNYLKELHMEQ 63 (282)
T ss_dssp CCEEEECCCCCCSCT------T---SCCCHHHHHHHHHHHHTTCEEEEECSSCGGG-THHHHHHTTCCS
T ss_pred ceEEEEeCCCCCCCC------C---CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHhCCCC
Confidence 789999999999973 1 2356889999999999999999999999888 588899998754
No 43
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=99.29 E-value=1.7e-12 Score=84.61 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=40.3
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..++||+.++|+.|+++| +++|+||++... +...++++|+.++|
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~-~~~~l~~~gl~~~f 138 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVF-QPRKIARSGLWDEV 138 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSH-HHHHHHHTTHHHHT
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHH-HHHHHHHcCcHHhc
Confidence 468899999999999999 999999999888 59999999998887
No 44
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=99.28 E-value=2.8e-12 Score=90.37 Aligned_cols=73 Identities=21% Similarity=0.280 Sum_probs=57.1
Q ss_pred CCCCceEEEeCCCCcccccccccc-------cCCC-cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH-----
Q 034147 19 ENLPRLVVFDLDYTLWPFYCECCY-------EDEI-PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK----- 85 (103)
Q Consensus 19 ~~~~~~~~fD~DGTL~~~~~~~~~-------~~~~-~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~----- 85 (103)
.+.+|+++||+|||||++....+. .+.. ..+|||+.++|+.|+++|++++|+||++... ++..+++
T Consensus 219 ~~~iK~lv~DvDnTL~~G~l~~dG~~~~~~~dg~g~g~~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~-v~~~l~~~~~~~ 297 (387)
T 3nvb_A 219 GKFKKCLILDLDNTIWGGVVGDDGWENIQVGHGLGIGKAFTEFQEWVKKLKNRGIIIAVCSKNNEGK-AKEPFERNPEMV 297 (387)
T ss_dssp TCCCCEEEECCBTTTBBSCHHHHCGGGSBCSSSSSTHHHHHHHHHHHHHHHHTTCEEEEEEESCHHH-HHHHHHHCTTCS
T ss_pred hCCCcEEEEcCCCCCCCCeecCCCceeEEeccCccccccCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHhhccccc
Confidence 457999999999999995432111 1111 4679999999999999999999999999888 6999988
Q ss_pred cCCCCcc
Q 034147 86 LGIHSMF 92 (103)
Q Consensus 86 ~~l~~~~ 92 (103)
+++.+++
T Consensus 298 l~l~~~~ 304 (387)
T 3nvb_A 298 LKLDDIA 304 (387)
T ss_dssp SCGGGCS
T ss_pred cCccCcc
Confidence 5655555
No 45
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=99.28 E-value=1.2e-11 Score=82.41 Aligned_cols=60 Identities=23% Similarity=0.340 Sum_probs=43.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
++|+++||+||||++. ...+.+...++|++++++|++++++||++... +...++.+++..
T Consensus 4 ~~kli~~DlDGTLl~~---------~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~~ 63 (279)
T 3mpo_A 4 TIKLIAIDIDGTLLNE---------KNELAQATIDAVQAAKAQGIKVVLCTGRPLTG-VQPYLDAMDIDG 63 (279)
T ss_dssp -CCEEEECC--------------------CHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTCCS
T ss_pred ceEEEEEcCcCCCCCC---------CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHcCCCC
Confidence 4799999999999984 12466889999999999999999999999888 588999998764
No 46
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=99.28 E-value=4.1e-12 Score=82.09 Aligned_cols=50 Identities=28% Similarity=0.449 Sum_probs=42.4
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
.++||+.++|++|+++|++++++||++. . +...++++|+..+| +.+++++
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~-~~~~l~~~gl~~~f--~~~~~~~ 144 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-R-VKTLLEKFDLKKYF--DALALSY 144 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-H-HHHHHHHHTCGGGC--SEEC---
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-H-HHHHHHhcCcHhHe--eEEEecc
Confidence 5789999999999999999999999975 5 48899999999999 8887765
No 47
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=99.27 E-value=7.8e-12 Score=81.59 Aligned_cols=72 Identities=18% Similarity=0.118 Sum_probs=53.1
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccC-hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLY-PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~-~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+.+++++||+||||+++...+.........+ ..-..+|++|+++|++++|+||++... ++..++++|+..+|
T Consensus 47 ~~ik~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~G~~l~I~T~~~~~~-~~~~l~~lgi~~~f 119 (211)
T 3ij5_A 47 ANIRLLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITSDIDVAIITGRRAKL-LEDRANTLGITHLY 119 (211)
T ss_dssp TTCSEEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHHHTCCEEE
T ss_pred hCCCEEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCchhh
Confidence 3578999999999999653332222211111 111228999999999999999999888 69999999998776
No 48
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.27 E-value=1.8e-11 Score=81.66 Aligned_cols=59 Identities=25% Similarity=0.325 Sum_probs=51.1
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
++|+++||+||||++. ...+.+...++|++++++|++++++||++... +...++.+++.
T Consensus 4 ~~kli~fDlDGTLl~~---------~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~ 62 (279)
T 4dw8_A 4 KYKLIVLDLDGTLTNS---------KKEISSRNRETLIRIQEQGIRLVLASGRPTYG-IVPLANELRMN 62 (279)
T ss_dssp CCCEEEECCCCCCSCT---------TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHTTGG
T ss_pred cceEEEEeCCCCCCCC---------CCccCHHHHHHHHHHHHCCCEEEEEcCCChHH-HHHHHHHhCCC
Confidence 4799999999999974 12456889999999999999999999999888 58889998873
No 49
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=99.27 E-value=1e-11 Score=78.62 Aligned_cols=71 Identities=18% Similarity=0.051 Sum_probs=50.4
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccC-hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLY-PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~-~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+.+++++||+||||++....+.........+ ..-..+|++|+++|++++|+||++... ++..++++|+. +|
T Consensus 10 ~~~k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~~~~lgi~-~~ 81 (176)
T 3mmz_A 10 EDIDAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLGIAALRKSGLTMLILSTEQNPV-VAARARKLKIP-VL 81 (176)
T ss_dssp GGCSEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHHHHHHHHTTCEEEEEESSCCHH-HHHHHHHHTCC-EE
T ss_pred hcCCEEEEeCCCCcCcCCEeecCCccHhHhcccccHHHHHHHHHCCCeEEEEECcChHH-HHHHHHHcCCe-eE
Confidence 3578999999999998433222111111111 111227999999999999999999888 69999999987 44
No 50
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=99.27 E-value=1.2e-11 Score=79.22 Aligned_cols=51 Identities=27% Similarity=0.330 Sum_probs=44.8
Q ss_pred cccChhHHHHHHHHHHCC-CeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeec
Q 034147 47 PYLYPHAKGILEALKEKG-IHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G-~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~ 100 (103)
..++|++.++++.|+++| ++++++|+++... +...++.+++.++| +.++++
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~-~~~~l~~~~~~~~f--~~~~~~ 155 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLD-QENKLERSGLSPYF--DHIEVM 155 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHH-HHHHHHHHTCGGGC--SEEEEE
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHH-HHHHHHHhCcHhhh--heeeec
Confidence 467899999999999999 9999999998777 58899999999888 777654
No 51
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=99.27 E-value=1.6e-11 Score=80.42 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=50.6
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+|+++||+||||++. ...+.+...+++++++++|++++++||++... +...++.+++..
T Consensus 3 ~kli~~DlDGTLl~~---------~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~-~~~~~~~l~~~~ 61 (231)
T 1wr8_A 3 IKAISIDIDGTITYP---------NRMIHEKALEAIRRAESLGIPIMLVTGNTVQF-AEAASILIGTSG 61 (231)
T ss_dssp CCEEEEESTTTTBCT---------TSCBCHHHHHHHHHHHHTTCCEEEECSSCHHH-HHHHHHHHTCCS
T ss_pred eeEEEEECCCCCCCC---------CCcCCHHHHHHHHHHHHCCCEEEEEcCCChhH-HHHHHHHcCCCC
Confidence 689999999999973 12366889999999999999999999999888 588888888754
No 52
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=99.26 E-value=6.6e-12 Score=79.58 Aligned_cols=50 Identities=6% Similarity=0.099 Sum_probs=44.0
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
.++|++.++++.|+++| +++++||++... +...++++++..+| +.+++++
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~-~~~~l~~~~~~~~f--~~~~~~~ 135 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDL-NEYRIRTFGLGEFL--LAFFTSS 135 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHH-HHHHHHHHTGGGTC--SCEEEHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHH-HHHHHHhCCHHHhc--ceEEeec
Confidence 47899999999999999 999999999877 58899999998888 7777654
No 53
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=99.26 E-value=3.4e-12 Score=87.76 Aligned_cols=46 Identities=22% Similarity=0.213 Sum_probs=42.3
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
...++||+.+++++|+++|++++|+||+.... ++..++++|+..+|
T Consensus 177 ~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~-~~~~l~~lgl~~~f 222 (317)
T 4eze_A 177 RMTLSPGLLTILPVIKAKGFKTAIISGGLDIF-TQRLKARYQLDYAF 222 (317)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHTCSEEE
T ss_pred CCEECcCHHHHHHHHHhCCCEEEEEeCccHHH-HHHHHHHcCCCeEE
Confidence 35689999999999999999999999999887 69999999998887
No 54
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=99.26 E-value=1.6e-11 Score=87.09 Aligned_cols=77 Identities=23% Similarity=0.325 Sum_probs=56.0
Q ss_pred CCCceEEEeCCCCccccccc--cccc-CCCcccChhHHHHHHHHHHCCCeEEEEeCCC------------chhHHHHHHH
Q 034147 20 NLPRLVVFDLDYTLWPFYCE--CCYE-DEIPYLYPHAKGILEALKEKGIHVAVASRSP------------APDIAKTFLH 84 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~--~~~~-~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~------------~~~i~~~~l~ 84 (103)
..+++++||+||||++.... +... .....++||+.++|++|+++|++++|+||++ ... +...++
T Consensus 56 ~~~k~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~-~~~~l~ 134 (416)
T 3zvl_A 56 PQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGK-VEAVLE 134 (416)
T ss_dssp CCSSEEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHH-HHHHHH
T ss_pred CCCeEEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHH-HHHHHH
Confidence 35799999999999974321 1111 1222478999999999999999999999966 222 367788
Q ss_pred HcCCCCccccCeeeecc
Q 034147 85 KLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 85 ~~~l~~~~~~~~i~~~~ 101 (103)
++|+. | +.+++++
T Consensus 135 ~lgl~--f--d~i~~~~ 147 (416)
T 3zvl_A 135 KLGVP--F--QVLVATH 147 (416)
T ss_dssp HHTSC--C--EEEEECS
T ss_pred HcCCC--E--EEEEECC
Confidence 99984 6 6777664
No 55
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=99.26 E-value=4.9e-12 Score=80.44 Aligned_cols=42 Identities=24% Similarity=0.310 Sum_probs=37.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
..++|++.++++.|+++|++++++|+++... ++..++++++.
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~~~~~~~~ 122 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSES-IQPFADYLNIP 122 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHTCC
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHH-HHHHHHHcCCC
Confidence 3478999999999999999999999999887 59999999984
No 56
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=99.25 E-value=1.4e-11 Score=82.62 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=53.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeC---CCchhHHHHHHHHcCCC-CccccCe
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR---SPAPDIAKTFLHKLGIH-SMFVPMV 96 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~---~~~~~i~~~~l~~~~l~-~~~~~~~ 96 (103)
.+++++||+||||++. ..+++++.+.|++++++|++++++|| ++... ....++.+++. ..+ +.
T Consensus 13 ~~k~i~~D~DGtL~~~----------~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~-~~~~l~~lg~~~~~~--~~ 79 (284)
T 2hx1_A 13 KYKCIFFDAFGVLKTY----------NGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQ-LADSYHKLGLFSITA--DK 79 (284)
T ss_dssp GCSEEEECSBTTTEET----------TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHH-HHHHHHHTTCTTCCG--GG
T ss_pred cCCEEEEcCcCCcCcC----------CeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHH-HHHHHHHCCcCCCCH--hh
Confidence 4889999999999972 34678999999999999999999997 55566 47788889887 544 55
Q ss_pred eeec
Q 034147 97 RLSC 100 (103)
Q Consensus 97 i~~~ 100 (103)
++++
T Consensus 80 ii~~ 83 (284)
T 2hx1_A 80 IISS 83 (284)
T ss_dssp EEEH
T ss_pred EEcH
Confidence 5543
No 57
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=99.25 E-value=1.8e-11 Score=78.95 Aligned_cols=53 Identities=11% Similarity=0.099 Sum_probs=46.4
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
...++|++.++++.|+++ ++++++|+++... +...++.+++..+| +.+++++.
T Consensus 101 ~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 153 (238)
T 3ed5_A 101 GHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHT-QYKRLRDSGLFPFF--KDIFVSED 153 (238)
T ss_dssp CCCBCTTHHHHHHHHHTT-SEEEEEECSCHHH-HHHHHHHTTCGGGC--SEEEEGGG
T ss_pred cCCCCccHHHHHHHHHhc-CeEEEEeCCCHHH-HHHHHHHcChHhhh--heEEEecc
Confidence 356889999999999999 9999999999877 58899999999999 88887653
No 58
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=99.25 E-value=2.3e-11 Score=78.46 Aligned_cols=71 Identities=17% Similarity=0.190 Sum_probs=53.0
Q ss_pred CCceEEEeCCCCcccccccccccCC-CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDE-IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~-~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.+++++||+||||++....+..... .....+.....|+.|+++|++++|+||++... ++..++++|+..+|
T Consensus 24 ~ik~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~-~~~~l~~lgi~~~~ 95 (195)
T 3n07_A 24 QIKLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQI-VENRMKALGISLIY 95 (195)
T ss_dssp TCCEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHHTTCCEEE
T ss_pred CCCEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHH-HHHHHHHcCCcEEe
Confidence 4789999999999984332222111 11222334456999999999999999999888 69999999998766
No 59
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=99.25 E-value=2.6e-12 Score=84.07 Aligned_cols=53 Identities=21% Similarity=0.225 Sum_probs=42.7
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH-cCCCCccccCeeeecc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK-LGIHSMFVPMVRLSCC 101 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~-~~l~~~~~~~~i~~~~ 101 (103)
...++|++.++++.|+++|++++++||+.... +...+.+ +++..+| +.+++++
T Consensus 110 ~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~-~~~~l~~~~~l~~~f--~~~~~~~ 163 (250)
T 3l5k_A 110 TAALMPGAEKLIIHLRKHGIPFALATSSRSAS-FDMKTSRHKEFFSLF--SHIVLGD 163 (250)
T ss_dssp GCCBCTTHHHHHHHHHHTTCCEEEECSCCHHH-HHHHTTTCHHHHTTS--SCEECTT
T ss_pred cCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHH-HHHHHHhccCHHhhe--eeEEecc
Confidence 35688999999999999999999999999766 3655544 5777788 7777765
No 60
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=99.25 E-value=5.3e-12 Score=81.54 Aligned_cols=45 Identities=24% Similarity=0.381 Sum_probs=40.3
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC--cc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS--MF 92 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~--~~ 92 (103)
.+++||+.++|++|+++|++++|+||++... ++..++++|+.. +|
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~l~~~gl~~~~~f 131 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSI-VEHVASKLNIPATNVF 131 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHTTCCGGGEE
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHH-HHHHHHHcCCCcccEE
Confidence 4688999999999999999999999999887 699999999973 55
No 61
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=99.25 E-value=6.3e-12 Score=81.94 Aligned_cols=52 Identities=17% Similarity=0.210 Sum_probs=46.0
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
.++|++.++++.|+++|++++++||++... +...++++++..+| +.+++++.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 145 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVK-QWEKILRLELDDFF--EHVIISDF 145 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHH-HHHHHHHTTCGGGC--SEEEEGGG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchh-HHHHHHHcCcHhhc--cEEEEeCC
Confidence 478999999999999999999999999777 58899999999999 88887653
No 62
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=99.24 E-value=2.1e-11 Score=76.50 Aligned_cols=49 Identities=18% Similarity=0.279 Sum_probs=42.8
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
++|++.++++.|+++|++++++|+++ .. +...++++++..+| +.+++++
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~-~~~~l~~~~~~~~f--~~~~~~~ 131 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQ-VLEILEKTSIAAYF--TEVVTSS 131 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC-TH-HHHHHHHTTCGGGE--EEEECGG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc-HH-HHHHHHHcCCHhhe--eeeeecc
Confidence 78999999999999999999999887 45 58889999998888 7777664
No 63
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=99.24 E-value=2.8e-11 Score=79.56 Aligned_cols=50 Identities=20% Similarity=0.254 Sum_probs=44.2
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
.++|++.++++.|+ |++++++||++... +...++++++..+| +.+++++.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~-~~~~l~~~gl~~~f--~~~~~~~~ 142 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDM-LQALVANAGLTDSF--DAVISVDA 142 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHH-HHHHHHHTTCGGGC--SEEEEGGG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHH-HHHHHHHCCchhhc--cEEEEccc
Confidence 57899999999999 89999999999887 58899999999888 88887653
No 64
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=99.24 E-value=1.8e-11 Score=79.04 Aligned_cols=48 Identities=29% Similarity=0.363 Sum_probs=41.9
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
++||+.++++.|+++|++++++||++. +...++++++..+| +.+++++
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~---~~~~l~~~gl~~~f--~~i~~~~ 140 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN---APKILRRLAIIDDF--HAIVDPT 140 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT---HHHHHHHTTCTTTC--SEECCC-
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh---HHHHHHHcCcHhhc--CEEeeHh
Confidence 789999999999999999999999864 37789999999999 7877765
No 65
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=99.24 E-value=1.5e-12 Score=83.14 Aligned_cols=42 Identities=10% Similarity=-0.026 Sum_probs=36.9
Q ss_pred CcccChhHHHHHHHHHHC-CCeEEEEeCCCchhHHHHHHHHcCC
Q 034147 46 IPYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~-G~~v~i~T~~~~~~i~~~~l~~~~l 88 (103)
...++||+.++|++|+++ |++++|+||++... +...++++|+
T Consensus 71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~-~~~~l~~~gl 113 (193)
T 2i7d_A 71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKY-HHCVGEKYRW 113 (193)
T ss_dssp TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSC-TTTHHHHHHH
T ss_pred cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhh-HHHHHHHhCc
Confidence 456899999999999999 99999999999877 5888888876
No 66
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=99.24 E-value=1.5e-11 Score=81.06 Aligned_cols=52 Identities=15% Similarity=0.065 Sum_probs=45.1
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCc-cccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM-FVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~-~~~~~i~~~~ 101 (103)
..++||+.++++.|+++|++++++||++... ++..++.+++..+ | +.+++++
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~-~~~~l~~~~~~~~~~--~~~~~~~ 162 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGM-MAPALIAAKEQGYTP--ASTVFAT 162 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHHHTTCCC--SEEECGG
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHH-HHHHHHhcCcccCCC--ceEecHH
Confidence 3678999999999999999999999999877 5889999988777 6 7777765
No 67
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=99.23 E-value=1.1e-11 Score=82.45 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=44.4
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
.++||+.++|+.|++ +++++|+||++... +...++++|+..+| +.+++++
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~-~~~~l~~~gl~~~f--~~i~~~~ 170 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQT-QREKIEACACQSYF--DAIVIGG 170 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHH-HHHHHHHHTCGGGC--SEEEEGG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHH-HHHHHHhcCHHhhh--heEEecC
Confidence 578999999999998 59999999999877 58899999999999 8887765
No 68
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=99.23 E-value=2.2e-11 Score=81.82 Aligned_cols=60 Identities=28% Similarity=0.360 Sum_probs=50.2
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.+++++||+||||++. .. ...+...++|++|+++|++++++|||+... +...++.+++..
T Consensus 8 ~~~li~~DlDGTLl~~------~~---~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~~ 67 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDS------HS---YDWQPAAPWLTRLREANVPVILCSSKTSAE-MLYLQKTLGLQG 67 (275)
T ss_dssp CCEEEEEECTTTTSCS------SC---CSCCTTHHHHHHHHHTTCCEEEECSSCHHH-HHHHHHHTTCTT
T ss_pred CceEEEEeCCCCCCCC------CC---cCCHHHHHHHHHHHHCCCeEEEEcCCCHHH-HHHHHHHcCCCC
Confidence 3789999999999973 11 234668999999999999999999999888 588999998854
No 69
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=99.23 E-value=5.6e-12 Score=80.85 Aligned_cols=72 Identities=17% Similarity=0.127 Sum_probs=51.7
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcc-cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPY-LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~-~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+.+++++||+||||++....+....+... ....-...|++|+++|++++++||++... ++..++++|+..+|
T Consensus 17 ~~ik~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~-~~~~l~~lgl~~~~ 89 (191)
T 3n1u_A 17 KKIKCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAV-VDHRMEQLGITHYY 89 (191)
T ss_dssp HTCSEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHH-HHHHHHHHTCCEEE
T ss_pred hcCCEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHH-HHHHHHHcCCccce
Confidence 45899999999999984322221111111 11111225999999999999999999888 69999999998776
No 70
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.22 E-value=2.9e-11 Score=81.00 Aligned_cols=59 Identities=20% Similarity=0.256 Sum_probs=51.0
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
++|+++||+||||++. ...+.+...++|++++++|++++++||++... +...++.+++.
T Consensus 5 ~~kli~fDlDGTLl~~---------~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~~~~~ 63 (290)
T 3dnp_A 5 SKQLLALNIDGALLRS---------NGKIHQATKDAIEYVKKKGIYVTLVTNRHFRS-AQKIAKSLKLD 63 (290)
T ss_dssp -CCEEEECCCCCCSCT---------TSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHH-HHHHHHHTTCC
T ss_pred cceEEEEcCCCCCCCC---------CCccCHHHHHHHHHHHHCCCEEEEECCCChHH-HHHHHHHcCCC
Confidence 3799999999999983 12466889999999999999999999999888 58889999886
No 71
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=99.22 E-value=3.1e-12 Score=81.91 Aligned_cols=46 Identities=11% Similarity=-0.026 Sum_probs=38.3
Q ss_pred CcccChhHHHHHHHHHHC-CCeEEEEeCCCchhHHHHHHHHcCCCC-cc
Q 034147 46 IPYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHS-MF 92 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~-G~~v~i~T~~~~~~i~~~~l~~~~l~~-~~ 92 (103)
...++||+.++|++|+++ |++++|+||++... ++..++++++.. +|
T Consensus 73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~-~~~~l~~~~l~~~~f 120 (197)
T 1q92_A 73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMF-KYCPYEKYAWVEKYF 120 (197)
T ss_dssp TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCC-SSHHHHHHHHHHHHH
T ss_pred cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccch-HHHHHHHhchHHHhc
Confidence 356899999999999999 99999999999776 477777777665 54
No 72
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.22 E-value=1.8e-11 Score=81.01 Aligned_cols=51 Identities=22% Similarity=0.263 Sum_probs=45.3
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
.++||+.++|+.|+++|++++++||++... +...++++|+..+| +.+++++
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~~~~~gl~~~f--~~~~~~~ 194 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFV-AKWVAEELGLDDYF--AEVLPHE 194 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCSEEE--CSCCGGG
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCChhHh--HhcCHHH
Confidence 578999999999999999999999999888 69999999999888 6666553
No 73
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=99.22 E-value=1.5e-11 Score=82.61 Aligned_cols=61 Identities=20% Similarity=0.246 Sum_probs=50.6
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
.++|+++||+||||++. .. ..+.+.+.++|++++++|++++++||++... +...++.++..
T Consensus 19 ~~~kli~~DlDGTLl~~------~~--~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~-~~~~~~~l~~~ 79 (283)
T 3dao_A 19 GMIKLIATDIDGTLVKD------GS--LLIDPEYMSVIDRLIDKGIIFVVCSGRQFSS-EFKLFAPIKHK 79 (283)
T ss_dssp CCCCEEEECCBTTTBST------TC--SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHTGGGGGG
T ss_pred cCceEEEEeCcCCCCCC------CC--CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHcCCC
Confidence 46899999999999973 11 1356889999999999999999999999888 58887777654
No 74
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=99.21 E-value=3.2e-11 Score=81.20 Aligned_cols=59 Identities=25% Similarity=0.331 Sum_probs=50.1
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+|+++||+||||++.. ..+.+...+++++++++|++++++||++... +...++.+++..
T Consensus 4 ikli~~DlDGTLl~~~---------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~~~ 62 (288)
T 1nrw_A 4 MKLIAIDLDGTLLNSK---------HQVSLENENALRQAQRDGIEVVVSTGRAHFD-VMSIFEPLGIKT 62 (288)
T ss_dssp CCEEEEECCCCCSCTT---------SCCCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHGGGTCCC
T ss_pred eEEEEEeCCCCCCCCC---------CccCHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCCC
Confidence 7899999999999731 2356788999999999999999999999888 588888888754
No 75
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.21 E-value=1.7e-11 Score=80.45 Aligned_cols=59 Identities=24% Similarity=0.242 Sum_probs=51.3
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+|++++|+||||++. ...+.+.+.+.|++|+++|++++++||++... +...++.+++..
T Consensus 5 ~kli~~DlDGTLl~~---------~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~-~~~~~~~l~~~~ 63 (227)
T 1l6r_A 5 IRLAAIDVDGNLTDR---------DRLISTKAIESIRSAEKKGLTVSLLSGNVIPV-VYALKIFLGING 63 (227)
T ss_dssp CCEEEEEHHHHSBCT---------TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCCS
T ss_pred eEEEEEECCCCCcCC---------CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHH-HHHHHHHhCCCC
Confidence 689999999999973 12466889999999999999999999999888 588899998864
No 76
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=99.21 E-value=2.5e-11 Score=78.72 Aligned_cols=67 Identities=16% Similarity=0.091 Sum_probs=53.5
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCc---------------hhHHHHHHHH
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---------------PDIAKTFLHK 85 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~---------------~~i~~~~l~~ 85 (103)
.+++++||+||||++...+ ........++||+.++|++|+++|++++|+||++. .. +...+++
T Consensus 30 ~~k~i~~D~DGtl~~~~~y-~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 107 (218)
T 2o2x_A 30 HLPALFLDRDGTINVDTDY-PSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGR-VLELLRE 107 (218)
T ss_dssp SCCCEEECSBTTTBCCCSC-TTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHH-HHHHHHH
T ss_pred cCCEEEEeCCCCcCCCCcc-cCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHH-HHHHHHH
Confidence 4789999999999974211 11123356899999999999999999999999987 56 5888999
Q ss_pred cCCC
Q 034147 86 LGIH 89 (103)
Q Consensus 86 ~~l~ 89 (103)
+|+.
T Consensus 108 ~gl~ 111 (218)
T 2o2x_A 108 EGVF 111 (218)
T ss_dssp TTCC
T ss_pred cCCc
Confidence 9874
No 77
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=99.21 E-value=3e-11 Score=84.32 Aligned_cols=67 Identities=18% Similarity=0.209 Sum_probs=52.7
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCc---hhHHHHHHH-HcCCCCccccCe
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA---PDIAKTFLH-KLGIHSMFVPMV 96 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~---~~i~~~~l~-~~~l~~~~~~~~ 96 (103)
..++++||+||||+++ ..+.||+.+++++|++.|++++++||++. ... ...+. .+|+.- ..+.
T Consensus 12 ~~~~~l~D~DGvl~~g----------~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~-~~~l~~~lgi~~--~~~~ 78 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRG----------KKPIAGASDALKLLNRNKIPYILLTNGGGFSERAR-TEFISSKLDVDV--SPLQ 78 (352)
T ss_dssp CCEEEEECCBTTTEET----------TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHH-HHHHHHHHTSCC--CGGG
T ss_pred cCCEEEEECCCeeEcC----------CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHH-HHHHHHhcCCCC--Chhh
Confidence 4788999999999973 45789999999999999999999998763 442 34444 688864 3377
Q ss_pred eeec
Q 034147 97 RLSC 100 (103)
Q Consensus 97 i~~~ 100 (103)
|+++
T Consensus 79 i~ts 82 (352)
T 3kc2_A 79 IIQS 82 (352)
T ss_dssp EECT
T ss_pred Eeeh
Confidence 7765
No 78
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=99.21 E-value=3.3e-11 Score=79.66 Aligned_cols=59 Identities=29% Similarity=0.332 Sum_probs=49.8
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+|+++||+||||++. . ..+.+...+++++++++|++++++||++... +...++.+++..
T Consensus 3 ~kli~~DlDGTLl~~------~---~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~-~~~~~~~l~~~~ 61 (258)
T 2pq0_A 3 RKIVFFDIDGTLLDE------Q---KQLPLSTIEAVRRLKQSGVYVAIATGRAPFM-FEHVRKQLGIDS 61 (258)
T ss_dssp CCEEEECTBTTTBCT------T---SCCCHHHHHHHHHHHHTTCEEEEECSSCGGG-SHHHHHHHTCCC
T ss_pred ceEEEEeCCCCCcCC------C---CccCHHHHHHHHHHHHCCCEEEEECCCChHH-HHHHHHhcCCCE
Confidence 689999999999973 1 2356788999999999999999999999888 488888887654
No 79
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=99.21 E-value=3.2e-11 Score=79.92 Aligned_cols=51 Identities=22% Similarity=0.251 Sum_probs=44.4
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++||+.++|+.|+++|++++|+||++. . ....++.+|+..+| +.+++++
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~-~~~~l~~~gl~~~f--~~~~~~~ 155 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDR-R-LEGILGGLGLREHF--DFVLTSE 155 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCT-T-HHHHHHHTTCGGGC--SCEEEHH
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcH-H-HHHHHHhCCcHHhh--hEEEeec
Confidence 36899999999999999999999999775 5 48889999999999 7877764
No 80
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=99.20 E-value=2.2e-11 Score=80.70 Aligned_cols=60 Identities=18% Similarity=0.195 Sum_probs=50.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
++|+++||+||||++.. ..+.+...+++++++++|++++++||++... +...++.+++..
T Consensus 4 M~kli~fDlDGTLl~~~---------~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~~~~~~ 63 (274)
T 3fzq_A 4 LYKLLILDIDGTLRDEV---------YGIPESAKHAIRLCQKNHCSVVICTGRSMGT-IQDDVLSLGVDG 63 (274)
T ss_dssp CCCEEEECSBTTTBBTT---------TBCCHHHHHHHHHHHHTTCEEEEECSSCTTT-SCHHHHTTCCSE
T ss_pred cceEEEEECCCCCCCCC---------CcCCHHHHHHHHHHHHCCCEEEEEeCCChHH-HHHHHHHcCCCE
Confidence 47999999999999841 2356889999999999999999999999888 488888887754
No 81
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=99.20 E-value=3.4e-11 Score=76.76 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=52.4
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccC-hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLY-PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~-~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.+++++||+||||++....+...+.....+ .....+|++|+++|++++|+||++... ++..++++|+..+|
T Consensus 25 ~ik~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~-~~~~l~~lgl~~~~ 96 (188)
T 2r8e_A 25 NIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKL-VEDRCATLGITHLY 96 (188)
T ss_dssp TCSEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHH-HHHHHHHHTCCEEE
T ss_pred cCCEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHH-HHHHHHHcCCceee
Confidence 579999999999998543332222211111 222348999999999999999999888 69999999987766
No 82
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.20 E-value=7.9e-12 Score=88.28 Aligned_cols=74 Identities=23% Similarity=0.165 Sum_probs=59.8
Q ss_pred CCCCceEEEeCCCCccccccccc---------------------------------------------ccCCCcccChhH
Q 034147 19 ENLPRLVVFDLDYTLWPFYCECC---------------------------------------------YEDEIPYLYPHA 53 (103)
Q Consensus 19 ~~~~~~~~fD~DGTL~~~~~~~~---------------------------------------------~~~~~~~~~~g~ 53 (103)
.+++++++||+||||++.+.... .......++||+
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pg~ 261 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAGLPATVIDEVAGQLELMPGA 261 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHHHHHHCCBCTTH
T ss_pred ccCCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHHHHHhCccCccH
Confidence 45689999999999999653200 001234689999
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccc
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~ 93 (103)
.+++++|+++|++++|+||+.... ++..++++|+..+|.
T Consensus 262 ~e~l~~Lk~~G~~~~ivS~~~~~~-~~~~~~~lgl~~~~~ 300 (415)
T 3p96_A 262 RTTLRTLRRLGYACGVVSGGFRRI-IEPLAEELMLDYVAA 300 (415)
T ss_dssp HHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHCCCEEEEEcCCcHHH-HHHHHHHcCccceee
Confidence 999999999999999999999887 699999999987764
No 83
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.20 E-value=4.1e-11 Score=77.20 Aligned_cols=52 Identities=21% Similarity=0.188 Sum_probs=45.8
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeeccc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCCI 102 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~~ 102 (103)
..++|++.++++.|+ +|++++++|+++... +...++.+++..+| +.+++++.
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~-~~~~l~~~~l~~~f--~~~~~~~~ 157 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFREL-QSRKMRSAGVDRYF--KKIILSED 157 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHH-HHHHHHHHTCGGGC--SEEEEGGG
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHH-HHHHHHHcChHhhc--eeEEEecc
Confidence 467899999999999 899999999999877 58899999999998 88887653
No 84
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=99.19 E-value=5e-11 Score=79.03 Aligned_cols=58 Identities=28% Similarity=0.324 Sum_probs=48.5
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe---CCCchhHHHHHHHHcCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS---RSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T---~~~~~~i~~~~l~~~~l~ 89 (103)
.+++++||+||||++. ..+.+++.+++++++++|++++++| +++... ....++.+|+.
T Consensus 16 ~~~~v~~DlDGTLl~~----------~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~-~~~~~~~lg~~ 76 (271)
T 1vjr_A 16 KIELFILDMDGTFYLD----------DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQD-YVRKLRNMGVD 76 (271)
T ss_dssp GCCEEEECCBTTTEET----------TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHH-HHHHHHHTTCC
T ss_pred CCCEEEEcCcCcEEeC----------CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHH-HHHHHHHcCCC
Confidence 4788999999999972 3466899999999999999999999 666666 47778888875
No 85
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=99.19 E-value=5.5e-11 Score=79.34 Aligned_cols=58 Identities=22% Similarity=0.109 Sum_probs=49.2
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+|+++||+||||++. . ..+.+...++|++ +++|++++++|||+... +...++.+++..
T Consensus 2 ikli~~DlDGTLl~~------~---~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~-~~~~~~~l~~~~ 59 (268)
T 1nf2_A 2 YRVFVFDLDGTLLND------N---LEISEKDRRNIEK-LSRKCYVVFASGRMLVS-TLNVEKKYFKRT 59 (268)
T ss_dssp BCEEEEECCCCCSCT------T---SCCCHHHHHHHHH-HTTTSEEEEECSSCHHH-HHHHHHHHSSSC
T ss_pred ccEEEEeCCCcCCCC------C---CccCHHHHHHHHH-HhCCCEEEEECCCChHH-HHHHHHHhCCCC
Confidence 689999999999973 1 2355788999999 99999999999999888 588899998754
No 86
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=99.19 E-value=3.8e-11 Score=78.42 Aligned_cols=51 Identities=22% Similarity=0.328 Sum_probs=44.7
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++||+.++|+.|+++|++++++||++... ++..++++++. +| +.+++++
T Consensus 109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~l~-~f--~~~~~~~ 159 (240)
T 2hi0_A 109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEA-VQVLVEELFPG-SF--DFALGEK 159 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHSTT-TC--SEEEEEC
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCc-ce--eEEEecC
Confidence 3578999999999999999999999998777 58899999988 88 7888765
No 87
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=99.17 E-value=4.2e-11 Score=76.08 Aligned_cols=49 Identities=22% Similarity=0.232 Sum_probs=43.7
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
.++||+.+ |+.|+++ ++++++||++... ++..++++++..+| +.+++++
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~-~~~~l~~~~l~~~f--~~~~~~~ 122 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINE-VKQHLERNGLLRYF--KGIFSAE 122 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHH-HHHHHHHTTCGGGC--SEEEEGG
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHH-HHHHHHHCCcHHhC--cEEEehh
Confidence 57899999 9999999 9999999999777 58899999999989 8888765
No 88
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=99.17 E-value=6.1e-11 Score=71.59 Aligned_cols=51 Identities=14% Similarity=0.103 Sum_probs=39.5
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCc
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
+++++||+||||++.... ......+.+++.+++++++++|++++++||++.
T Consensus 1 ik~i~~DlDGTL~~~~~~---~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANTS---DYRNVLPRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp CCEEEECSTTTTBCCCCS---CGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCEEEEecCCCCCCCCCC---ccccCCCCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 478999999999973210 000124668999999999999999999999985
No 89
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=99.17 E-value=6.8e-11 Score=78.55 Aligned_cols=49 Identities=20% Similarity=0.234 Sum_probs=41.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+|+++||+||||++. . ..+.+.+.++|++++++|++++++|||+...+
T Consensus 3 ~~kli~~DlDGTLl~~------~---~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~ 51 (246)
T 3f9r_A 3 KRVLLLFDVDGTLTPP------R---LCQTDEMRALIKRARGAGFCVGTVGGSDFAKQ 51 (246)
T ss_dssp CSEEEEECSBTTTBST------T---SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred CceEEEEeCcCCcCCC------C---CccCHHHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 3789999999999973 1 23568899999999999999999999997663
No 90
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=99.17 E-value=1.3e-11 Score=78.76 Aligned_cols=52 Identities=13% Similarity=0.229 Sum_probs=45.1
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
...++|++.++++.|+++ ++++++|+++... ++..++++++..+| +.+++++
T Consensus 81 ~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~-~~~~l~~~~l~~~f--~~~~~~~ 132 (209)
T 2hdo_A 81 QIELYPGITSLFEQLPSE-LRLGIVTSQRRNE-LESGMRSYPFMMRM--AVTISAD 132 (209)
T ss_dssp GCEECTTHHHHHHHSCTT-SEEEEECSSCHHH-HHHHHTTSGGGGGE--EEEECGG
T ss_pred cCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHH-HHHHHHHcChHhhc--cEEEecC
Confidence 356889999999999999 9999999999777 58899999998888 7777765
No 91
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=99.17 E-value=7.2e-11 Score=74.36 Aligned_cols=77 Identities=14% Similarity=0.103 Sum_probs=53.0
Q ss_pred CceEEEeCCCCccccccccc---------------------------------------ccCCCcccChhHHHHHHHHHH
Q 034147 22 PRLVVFDLDYTLWPFYCECC---------------------------------------YEDEIPYLYPHAKGILEALKE 62 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~---------------------------------------~~~~~~~~~~g~~~~l~~l~~ 62 (103)
+++++||+||||+|+...+. .......++||+.++|++|++
T Consensus 4 ~~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~ 83 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGAVVKAVNERADLNIKMESLNGKKLKHMIPEHEGLVMDILKEPGFFRNLDVMPHAQEVVKQLNE 83 (180)
T ss_dssp CCEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGGCTTCCC--------CHHHHHHHSTTGGGSCCBCTTHHHHHHHHTT
T ss_pred ccEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHHHcCccHHHHCCchHHHHHHHHhCcchhccCCCCcCHHHHHHHHHh
Confidence 47899999999999553210 001234689999999999998
Q ss_pred CCCeEEEEeCC---Cchh-HHHHHHHH-cCCCCccccCeeeecc
Q 034147 63 KGIHVAVASRS---PAPD-IAKTFLHK-LGIHSMFVPMVRLSCC 101 (103)
Q Consensus 63 ~G~~v~i~T~~---~~~~-i~~~~l~~-~~l~~~~~~~~i~~~~ 101 (103)
+ ++++|+||+ +... .....+.+ ++...++ +.+++++
T Consensus 84 ~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~--~~i~~~~ 124 (180)
T 3bwv_A 84 H-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQ--HFVFCGR 124 (180)
T ss_dssp T-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGG--GEEECSC
T ss_pred c-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcc--cEEEeCC
Confidence 5 999999998 3211 12444555 5665566 6777765
No 92
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=99.17 E-value=3.1e-11 Score=77.67 Aligned_cols=49 Identities=16% Similarity=0.091 Sum_probs=39.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++|+.|++ |++++++||++... ....++. +..+| +.+++++
T Consensus 98 ~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~-~~~~l~~--l~~~f--d~i~~~~ 146 (240)
T 3smv_A 98 WPAFPDTVEALQYLKK-HYKLVILSNIDRNE-FKLSNAK--LGVEF--DHIITAQ 146 (240)
T ss_dssp CCBCTTHHHHHHHHHH-HSEEEEEESSCHHH-HHHHHTT--TCSCC--SEEEEHH
T ss_pred CCCCCcHHHHHHHHHh-CCeEEEEeCCChhH-HHHHHHh--cCCcc--CEEEEcc
Confidence 3688999999999999 79999999999777 4777776 45677 7777754
No 93
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=99.17 E-value=5.2e-11 Score=75.97 Aligned_cols=52 Identities=25% Similarity=0.284 Sum_probs=45.0
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.+++.|++++++|+++... ++..++.+++..+| +.+++++
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~~~~~~--~~~~~~~ 144 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHM-LEKVLTMFDLRDSF--DALASAE 144 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHTTCGGGC--SEEEECT
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHH-HHHHHHhcCcHhhC--cEEEecc
Confidence 3578999999999999999999999999777 58889999998888 7777654
No 94
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=99.17 E-value=5.8e-11 Score=75.70 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=44.7
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.+++.|++++++|+++... ....++.+++..+| +.+++++
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ 139 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFR-ILSFLRNHMPDDWF--DIIIGGE 139 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHH-HHHHHHTSSCTTCC--SEEECGG
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHH-HHHHHHHcCchhhe--eeeeehh
Confidence 4568999999999999999999999998777 58889999998888 7777654
No 95
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=99.16 E-value=1.8e-11 Score=78.06 Aligned_cols=50 Identities=10% Similarity=0.131 Sum_probs=42.9
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH------cCCCCccccCeeeecc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK------LGIHSMFVPMVRLSCC 101 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~------~~l~~~~~~~~i~~~~ 101 (103)
.++|++.++++.|++ |++++++||++... +...++. +++..+| +.+++++
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~-~~~~~~~l~~~~~~~l~~~f--~~~~~~~ 144 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYV-LDLAMSPRFLPSGRTLDSFF--DKVYASC 144 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHH-HHHHTSTTSSTTCCCGGGGS--SEEEEHH
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHH-HHHHHhhhccccccCHHHHc--CeEEeec
Confidence 578999999999999 99999999999777 5878887 7888888 7777654
No 96
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=99.16 E-value=6.6e-11 Score=78.64 Aligned_cols=65 Identities=23% Similarity=0.388 Sum_probs=48.2
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHH---HcCCCCccccCeee
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLH---KLGIHSMFVPMVRL 98 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~---~~~l~~~~~~~~i~ 98 (103)
+++++||+||||++. ..+.+++.+++++++++|++++++||++... .....+ .+|+.... +.++
T Consensus 1 ik~i~~D~DGtL~~~----------~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~-~~~~~~~l~~lg~~~~~--~~i~ 67 (263)
T 1zjj_A 1 MVAIIFDMDGVLYRG----------NRAIPGVRELIEFLKERGIPFAFLTNNSTKT-PEMYREKLLKMGIDVSS--SIII 67 (263)
T ss_dssp CEEEEEECBTTTEET----------TEECTTHHHHHHHHHHHTCCEEEEESCCSSC-HHHHHHHHHTTTCCCCG--GGEE
T ss_pred CeEEEEeCcCceEeC----------CEeCccHHHHHHHHHHCCCeEEEEeCCCCCC-HHHHHHHHHHCCCCCCh--hhEE
Confidence 468999999999973 2345899999999999999999999988654 244444 46775333 4554
Q ss_pred e
Q 034147 99 S 99 (103)
Q Consensus 99 ~ 99 (103)
+
T Consensus 68 ~ 68 (263)
T 1zjj_A 68 T 68 (263)
T ss_dssp E
T ss_pred e
Confidence 4
No 97
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=99.16 E-value=7.1e-11 Score=79.41 Aligned_cols=71 Identities=17% Similarity=0.112 Sum_probs=56.0
Q ss_pred CceEEEeCCCCcccccccc----------cc-------cCCCcccChhHHHHHHHHHHCCCeEEEEeCCCch---hHHHH
Q 034147 22 PRLVVFDLDYTLWPFYCEC----------CY-------EDEIPYLYPHAKGILEALKEKGIHVAVASRSPAP---DIAKT 81 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~----------~~-------~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~---~i~~~ 81 (103)
.++++||+||||++...++ +. ......++||+.++++.|+++|++++++||++.. ..+..
T Consensus 58 ~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~ 137 (260)
T 3pct_A 58 KKAVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVD 137 (260)
T ss_dssp CEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHH
T ss_pred CCEEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHH
Confidence 4599999999999964331 10 1234679999999999999999999999998754 23788
Q ss_pred HHHHcCCCCcc
Q 034147 82 FLHKLGIHSMF 92 (103)
Q Consensus 82 ~l~~~~l~~~~ 92 (103)
.++.+|+..++
T Consensus 138 ~L~~lGi~~~~ 148 (260)
T 3pct_A 138 DMKRLGFTGVN 148 (260)
T ss_dssp HHHHHTCCCCS
T ss_pred HHHHcCcCccc
Confidence 99999997654
No 98
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=99.16 E-value=6.9e-11 Score=80.41 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=49.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHH--HHcC-CC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFL--HKLG-IH 89 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l--~~~~-l~ 89 (103)
++|+++||+||||++. .. ..+.+.+.+.|++|+++|++++++|||+... +...+ +.++ +.
T Consensus 26 ~ikli~~DlDGTLl~~-----~~---~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~-~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 26 DIKLLLIDFDGTLFVD-----KD---IKVPSENIDAIKEAIEKGYMVSICTGRSKVG-ILSAFGEENLKKMN 88 (301)
T ss_dssp CCCEEEEETBTTTBCC-----TT---TCSCHHHHHHHHHHHHHTCEEEEECSSCHHH-HHHHHCHHHHHHHT
T ss_pred cccEEEEECCCCCcCC-----CC---CccCHHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHhhHHhhcccc
Confidence 4799999999999972 01 2356789999999999999999999999888 58888 8877 64
No 99
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=99.15 E-value=3.7e-12 Score=82.92 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=45.6
Q ss_pred CCceEEEeCCCCccccccccc-------cc------------------CCCcccChhHHHHHHHHHHCCCeEEEEeCCCc
Q 034147 21 LPRLVVFDLDYTLWPFYCECC-------YE------------------DEIPYLYPHAKGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~-------~~------------------~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
.+++++||+||||++....+. .. .....+.+++.+++++|+++|++++|+||++.
T Consensus 36 ~~kaviFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~L~~~G~~l~ivTn~~~ 115 (211)
T 2b82_A 36 PPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFWEKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSP 115 (211)
T ss_dssp CCCEEEECCBTTTEECHHHHHHHHHHHCTTSSGGGGCHHHHHHHHTTGGGGCEECHHHHHHHHHHHHHTCEEEEEECSCC
T ss_pred CCCEEEEcCCCCCCcCcHHHHHHHHHhhHHHHHHhhhHHHHHHHHHhHHhcCCCcHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 589999999999998532110 00 00123567999999999999999999999986
Q ss_pred hhHHHHHHHH
Q 034147 76 PDIAKTFLHK 85 (103)
Q Consensus 76 ~~i~~~~l~~ 85 (103)
.. +...++.
T Consensus 116 ~~-~~~~l~~ 124 (211)
T 2b82_A 116 TK-TETVSKT 124 (211)
T ss_dssp CS-SCCHHHH
T ss_pred HH-HHHHHHH
Confidence 54 2444444
No 100
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=99.15 E-value=5.7e-11 Score=79.96 Aligned_cols=72 Identities=14% Similarity=0.030 Sum_probs=56.2
Q ss_pred CCceEEEeCCCCcccccccc----------cc-------cCCCcccChhHHHHHHHHHHCCCeEEEEeCCCch---hHHH
Q 034147 21 LPRLVVFDLDYTLWPFYCEC----------CY-------EDEIPYLYPHAKGILEALKEKGIHVAVASRSPAP---DIAK 80 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~----------~~-------~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~---~i~~ 80 (103)
.+++++||+||||++...++ +. ......++||+.++++.|+++|++++++||++.. ..+.
T Consensus 57 ~~~avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~ 136 (262)
T 3ocu_A 57 KKKAVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTI 136 (262)
T ss_dssp CEEEEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHH
T ss_pred CCeEEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHH
Confidence 46799999999999864321 10 1234679999999999999999999999988753 3378
Q ss_pred HHHHHcCCCCcc
Q 034147 81 TFLHKLGIHSMF 92 (103)
Q Consensus 81 ~~l~~~~l~~~~ 92 (103)
..++++|+..++
T Consensus 137 ~~L~~lGi~~~~ 148 (262)
T 3ocu_A 137 DDMKRLGFNGVE 148 (262)
T ss_dssp HHHHHHTCSCCS
T ss_pred HHHHHcCcCccc
Confidence 899999997644
No 101
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.14 E-value=1.4e-10 Score=74.96 Aligned_cols=77 Identities=22% Similarity=0.138 Sum_probs=60.9
Q ss_pred CCceEEEeCCCCccccccccccc--------------CCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYE--------------DEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~--------------~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
..+++++|+||||+.....-... .-....+||+.++|+++++. ++++|+|++.... ++..++.+
T Consensus 27 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~-a~~vl~~l 104 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKY-ADPVADLL 104 (195)
T ss_dssp TCCEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHH-HHHHHHHH
T ss_pred CCeEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHH-HHHHHHHh
Confidence 46789999999999853210000 01245789999999999998 9999999999888 79999999
Q ss_pred CCCCccccCeeeecc
Q 034147 87 GIHSMFVPMVRLSCC 101 (103)
Q Consensus 87 ~l~~~~~~~~i~~~~ 101 (103)
+...+| ..+++++
T Consensus 105 d~~~~f--~~~l~rd 117 (195)
T 2hhl_A 105 DRWGVF--RARLFRE 117 (195)
T ss_dssp CCSSCE--EEEECGG
T ss_pred CCcccE--EEEEEcc
Confidence 998888 6777664
No 102
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=99.14 E-value=2.9e-11 Score=80.75 Aligned_cols=57 Identities=23% Similarity=0.219 Sum_probs=45.5
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChh-HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPH-AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g-~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l 88 (103)
+|+++||+||||++. . ..+.+. +.++|++++++|++++++|||+... +...++.+++
T Consensus 3 ~kli~~DlDGTLl~~------~---~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~ 60 (271)
T 1rlm_A 3 VKVIVTDMDGTFLND------A---KTYNQPRFMAQYQELKKRGIKFVVASGNQYYQ-LISFFPELKD 60 (271)
T ss_dssp CCEEEECCCCCCSCT------T---SCCCHHHHHHHHHHHHHHTCEEEEECSSCHHH-HGGGCTTTTT
T ss_pred ccEEEEeCCCCCCCC------C---CcCCHHHHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHHHhcCC
Confidence 689999999999973 1 234466 4899999999999999999999877 4666666554
No 103
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=99.14 E-value=1.2e-10 Score=78.96 Aligned_cols=58 Identities=28% Similarity=0.360 Sum_probs=48.1
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeC---CCchhHHHHHHHHcCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASR---SPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~---~~~~~i~~~~l~~~~l~ 89 (103)
.+++++||+||||++. ..++|++.+.+++|+++|++++++|| ++... ....++.+++.
T Consensus 20 ~~k~i~~D~DGTL~~~----------~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~-~~~~~~~~g~~ 80 (306)
T 2oyc_A 20 RAQGVLFDCDGVLWNG----------ERAVPGAPELLERLARAGKAALFVSNNSRRARPE-LALRFARLGFG 80 (306)
T ss_dssp HCSEEEECSBTTTEET----------TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHH-HHHHHHHTTCC
T ss_pred hCCEEEECCCCcEecC----------CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHH-HHHHHHhcCCC
Confidence 4789999999999972 34678999999999999999999996 55555 36677888875
No 104
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=99.14 E-value=5.7e-11 Score=76.48 Aligned_cols=51 Identities=16% Similarity=0.209 Sum_probs=43.7
Q ss_pred cccChhHHHHHHHHHHC-CCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeec
Q 034147 47 PYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~-G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~ 100 (103)
..++|++.++|+.|+++ |++++++||++... +...++.+++..+| +.++++
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~-~~~~l~~~~l~~~f--~~~~~~ 143 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEAS-GRHKLKLPGIDHYF--PFGAFA 143 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSCHHH-HHHHHHTTTCSTTC--SCEECT
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHH-HHHHHHHCCchhhc--Ccceec
Confidence 45789999999999999 99999999999877 58899999999888 555544
No 105
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=99.13 E-value=1.9e-10 Score=75.41 Aligned_cols=60 Identities=23% Similarity=0.228 Sum_probs=44.9
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCC---chhHHHHHHHHcCCCC
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP---APDIAKTFLHKLGIHS 90 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~---~~~i~~~~l~~~~l~~ 90 (103)
..+++++||+||||++. ...++++.++++.++++|++++++|++. ... ....++.+|+..
T Consensus 5 ~~ik~i~fDlDGTLld~----------~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~-~~~~l~~~g~~~ 67 (259)
T 2ho4_A 5 RALKAVLVDLNGTLHIE----------DAAVPGAQEALKRLRATSVMVRFVTNTTKETKKD-LLERLKKLEFEI 67 (259)
T ss_dssp -CCCEEEEESSSSSCC-------------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHH-HHHHHHHTTCCC
T ss_pred hhCCEEEEeCcCcEEeC----------CEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHH-HHHHHHHcCCCc
Confidence 45899999999999983 2345788999999999999999999544 344 355666777643
No 106
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=99.13 E-value=3.9e-11 Score=77.70 Aligned_cols=50 Identities=16% Similarity=0.068 Sum_probs=40.5
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHH------HHcCCCCccccCeeeecc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFL------HKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l------~~~~l~~~~~~~~i~~~~ 101 (103)
.++||+.++|+.|+++ ++++|+||++... +...+ +.+++..+| +.+++++
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~-~~~~~~~l~~~~~~~l~~~f--d~i~~~~ 167 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIH-WKWVCKNAFPYRTFKVEDYF--EKTYLSY 167 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHH-HHHHHHHTSCBTTBCHHHHC--SEEEEHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHH-HHHHHhhhhhhccCCHHHhC--CEEEeec
Confidence 3679999999999998 9999999999776 46444 667877788 7777654
No 107
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=99.12 E-value=5e-11 Score=76.72 Aligned_cols=51 Identities=33% Similarity=0.490 Sum_probs=45.0
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.|+++ ++++++|+++... +...++.+++..+| +.+++++
T Consensus 99 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~-~~~~l~~~~~~~~f--~~~~~~~ 149 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGK-YHVGMITDSDTEQ-AMAFLDALGIKDLF--DSITTSE 149 (234)
T ss_dssp CCBCTTHHHHHHHHTTT-SEEEEEESSCHHH-HHHHHHHTTCGGGC--SEEEEHH
T ss_pred CCcCcCHHHHHHHHHhC-CcEEEEECCCHHH-HHHHHHHcCcHHHc--ceeEecc
Confidence 45789999999999999 9999999999877 58999999999988 7877754
No 108
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=99.12 E-value=5.3e-12 Score=80.15 Aligned_cols=52 Identities=19% Similarity=0.151 Sum_probs=41.1
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH-cCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK-LGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~-~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++|++|+++|++++++||++... +...+++ +++..+| +.+++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~~~~~~~l~~~f--~~~~~~~ 142 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLH-TTFWPEEYPEIRDAA--DHIYLSQ 142 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCT-TSCCGGGCHHHHHHC--SEEEEHH
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHH-HHHHHHhccChhhhe--eeEEEec
Confidence 4678999999999999999999999988766 3555555 6666777 7777653
No 109
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=99.11 E-value=1e-10 Score=77.47 Aligned_cols=57 Identities=26% Similarity=0.341 Sum_probs=47.4
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+|+++||+||||+ .. ..+ +.+.++|++|+++|++++++||++... +...++.+++..
T Consensus 2 ikli~~DlDGTLl-~~---------~~~-~~~~~~l~~l~~~g~~~~i~Tgr~~~~-~~~~~~~~~~~~ 58 (249)
T 2zos_A 2 IRLIFLDIDKTLI-PG---------YEP-DPAKPIIEELKDMGFEIIFNSSKTRAE-QEYYRKELEVET 58 (249)
T ss_dssp EEEEEECCSTTTC-TT---------SCS-GGGHHHHHHHHHTTEEEEEBCSSCHHH-HHHHHHHHTCCS
T ss_pred ccEEEEeCCCCcc-CC---------CCc-HHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCCc
Confidence 5899999999999 31 112 348999999999999999999999888 588899988753
No 110
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=99.11 E-value=1.5e-10 Score=72.63 Aligned_cols=51 Identities=25% Similarity=0.336 Sum_probs=43.8
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.++++|++++++|++.... .. .++.+++..+| +.+++++
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~-~~-~~~~~~~~~~f--~~~~~~~ 134 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNA-FT-ILKDLGVESYF--TEILTSQ 134 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHH-HH-HHHHHTCGGGE--EEEECGG
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHH-HH-HHHHcCchhhe--eeEEecC
Confidence 4578999999999999999999999999777 57 88999998888 7776654
No 111
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=99.11 E-value=1.4e-10 Score=73.23 Aligned_cols=67 Identities=22% Similarity=0.142 Sum_probs=47.9
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccCh-hHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHH--HcCCC
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYP-HAKGILEALKEKGIHVAVASRSPAPDIAKTFLH--KLGIH 89 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~-g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~--~~~l~ 89 (103)
+.+|+++||+||||++....+...++....+. .-...|++|+++|++++|+||+ .. ++..++ .+++.
T Consensus 7 ~~ikliv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~~L~~Lk~~Gi~~~I~Tg~--~~-~~~~l~~l~lgi~ 76 (168)
T 3ewi_A 7 KEIKLLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAIGISLLKKSGIEVRLISER--AC-SKQTLSALKLDCK 76 (168)
T ss_dssp CCCCEEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHHHHHHHHHTTCEEEEECSS--CC-CHHHHHTTCCCCC
T ss_pred hcCcEEEEeCccceECCcEEEcCCCCEEEEEecCcHHHHHHHHHCCCEEEEEeCc--HH-HHHHHHHhCCCcE
Confidence 46899999999999986544333333332221 1124799999999999999999 45 578888 66664
No 112
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=99.11 E-value=2e-10 Score=73.70 Aligned_cols=50 Identities=18% Similarity=0.287 Sum_probs=43.8
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCC---chhHHHHHHHHcCCCCccccCeeeecc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSP---APDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~---~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
++|++.++++.|+++|++++++|++. ... +...++.+++..+| +.+++++
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~-~~~~l~~~~l~~~f--~~~~~~~ 152 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSY-TRLLLERFGLMEFI--DKTFFAD 152 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHH-HHHHHHHTTCGGGC--SEEEEHH
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhH-HHHHHHhCCcHHHh--hhheecc
Confidence 57899999999999999999999998 777 58889999999888 7777653
No 113
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=99.10 E-value=5.9e-11 Score=75.18 Aligned_cols=45 Identities=27% Similarity=0.268 Sum_probs=38.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..++|++.++++.++++|++++++||++... +...++.+++..+|
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~-~~~~~~~~~~~~~~ 119 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIA-VNKIKEKLGLDYAF 119 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHH-HHHHHHHHTCSEEE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHH-HHHHHHHcCCCeEE
Confidence 3567999999999999999999999998777 58888999987655
No 114
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=99.10 E-value=5.5e-11 Score=77.73 Aligned_cols=49 Identities=14% Similarity=-0.011 Sum_probs=38.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++||+.++|++|+++|++++|+||++... ++..++ ++.. + +.+++++
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~-~~~~l~--~l~~-~--~~v~~~~ 124 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFF-VYPLLE--GIVE-K--DRIYCNH 124 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHH-HHHHHT--TTSC-G--GGEEEEE
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHH-HHHHHh--cCCC-C--CeEEeee
Confidence 4689999999999999999999999999776 577777 6644 2 4555543
No 115
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=99.09 E-value=2.5e-10 Score=72.73 Aligned_cols=50 Identities=22% Similarity=0.365 Sum_probs=42.2
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.+++.|++++++|++ .. +...++++++..+| +.+++++
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~-~~~~l~~~~l~~~f--~~~~~~~ 139 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KN-GPFLLERMNLTGYF--DAIADPA 139 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TT-HHHHHHHTTCGGGC--SEECCTT
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HH-HHHHHHHcChHHHc--ceEeccc
Confidence 457899999999999999999999998 44 47788999998888 7777664
No 116
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=99.09 E-value=6.1e-11 Score=80.37 Aligned_cols=58 Identities=21% Similarity=0.213 Sum_probs=46.9
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChh-HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPH-AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g-~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l 88 (103)
++|+++||+||||++.. ..+.+. ..++|++++++|++++++||++... +...++.++.
T Consensus 36 ~iKli~fDlDGTLld~~---------~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~-~~~~~~~l~~ 94 (304)
T 3l7y_A 36 SVKVIATDMDGTFLNSK---------GSYDHNRFQRILKQLQERDIRFVVASSNPYRQ-LREHFPDCHE 94 (304)
T ss_dssp CCSEEEECCCCCCSCTT---------SCCCHHHHHHHHHHHHHTTCEEEEECSSCHHH-HHTTCTTTGG
T ss_pred eeEEEEEeCCCCCCCCC---------CccCHHHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHhCC
Confidence 47999999999999831 234566 7899999999999999999999877 4766666554
No 117
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=99.09 E-value=3.3e-10 Score=72.32 Aligned_cols=77 Identities=22% Similarity=0.113 Sum_probs=60.4
Q ss_pred CCceEEEeCCCCccccccccccc--------------CCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYE--------------DEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~--------------~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
..+++++|+|+||+.....-... ......+||+.++|+++++. ++++|+|++.... ++..++.+
T Consensus 14 ~k~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~-a~~vl~~l 91 (181)
T 2ght_A 14 DKICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKY-ADPVADLL 91 (181)
T ss_dssp TSCEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHH-HHHHHHHH
T ss_pred CCeEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHH-HHHHHHHH
Confidence 46789999999999753210000 01246799999999999998 9999999999888 79999999
Q ss_pred CCCCccccCeeeecc
Q 034147 87 GIHSMFVPMVRLSCC 101 (103)
Q Consensus 87 ~l~~~~~~~~i~~~~ 101 (103)
+...+| ..+++++
T Consensus 92 d~~~~f--~~~~~rd 104 (181)
T 2ght_A 92 DKWGAF--RARLFRE 104 (181)
T ss_dssp CTTCCE--EEEECGG
T ss_pred CCCCcE--EEEEecc
Confidence 998887 6666654
No 118
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=99.07 E-value=2.7e-11 Score=76.25 Aligned_cols=44 Identities=32% Similarity=0.422 Sum_probs=38.0
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..++|++.++++.|+++|++++++|+++... ++.. +++++..++
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~-~~~~~~~~~ 121 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEV-LEPF-KELGDEFMA 121 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTT-SGGG-TTTSSEEEE
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHH-HHHH-HHcCchhhe
Confidence 4688999999999999999999999988777 4777 888887663
No 119
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=99.05 E-value=3.1e-10 Score=74.71 Aligned_cols=53 Identities=9% Similarity=0.095 Sum_probs=41.6
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.++++|++++++|+++... +...++.+++..+|. +.+++++
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~-~~~~l~~~~~~~~~~-~~~~~~~ 154 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREM-MDIVAKEAALQGYKP-DFLVTPD 154 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHH-HHHHHHHHHHTTCCC-SCCBCGG
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHH-HHHHHHHcCCcccCh-HheecCC
Confidence 3567999999999999999999999999777 588888887766531 4555544
No 120
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=99.05 E-value=6.2e-10 Score=73.56 Aligned_cols=59 Identities=22% Similarity=0.264 Sum_probs=46.5
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH----cCCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK----LGIHS 90 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~----~~l~~ 90 (103)
++++++||+||||++. ....+++.+.++.++++|++++++||+.... .....+. +|+..
T Consensus 4 ~~k~v~fDlDGTL~~~----------~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~-~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 4 DYQGYLIDLDGTIYLG----------KEPIPAGKRFVERLQEKDLPFLFVTNNTTKS-PETVAQRLANEFDIHV 66 (264)
T ss_dssp SCCEEEECCBTTTEET----------TEECHHHHHHHHHHHHTTCCEEEEECCCSSC-HHHHHHHHHHHSCCCC
T ss_pred cCCEEEEeCCCeEEeC----------CEECcCHHHHHHHHHHCCCeEEEEeCCCCCC-HHHHHHHHHHhcCCCC
Confidence 4789999999999973 2345889999999999999999999988655 3444443 77753
No 121
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=99.04 E-value=4.5e-10 Score=74.37 Aligned_cols=58 Identities=19% Similarity=0.356 Sum_probs=45.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l 88 (103)
++|+++||+||||++. . ...+.+...+.|++++++|++++++||++...+ . .++.+++
T Consensus 11 miKli~~DlDGTLl~~-----~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~-~-~~~~l~~ 68 (268)
T 3r4c_A 11 MIKVLLLDVDGTLLSF-----E---THKVSQSSIDALKKVHDSGIKIVIATGRAASDL-H-EIDAVPY 68 (268)
T ss_dssp CCCEEEECSBTTTBCT-----T---TCSCCHHHHHHHHHHHHTTCEEEEECSSCTTCC-G-GGTTSCC
T ss_pred ceEEEEEeCCCCCcCC-----C---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHh-H-HHHhcCC
Confidence 5899999999999972 1 123568899999999999999999999997663 3 3455554
No 122
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=99.04 E-value=2.2e-10 Score=73.00 Aligned_cols=45 Identities=16% Similarity=0.239 Sum_probs=40.4
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
...++||+.++++.|+++ ++++|+||++... ++..++++|+..+|
T Consensus 67 ~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~-~~~~l~~~gl~~~f 111 (206)
T 1rku_A 67 TLKPLEGAVEFVDWLRER-FQVVILSDTFYEF-SQPLMRQLGFPTLL 111 (206)
T ss_dssp TCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHH-HHHHHHHTTCCCEE
T ss_pred hcCCCccHHHHHHHHHhc-CcEEEEECChHHH-HHHHHHHcCCccee
Confidence 346799999999999999 9999999999777 69999999998877
No 123
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=99.03 E-value=2.1e-10 Score=75.63 Aligned_cols=59 Identities=22% Similarity=0.263 Sum_probs=44.8
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
+++++||+||||++.. .......+.+.+.++|++|+++| +++++|||+... +...++.+
T Consensus 1 ikli~~DlDGTLl~~~----~~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~-~~~~~~~l 59 (239)
T 1u02_A 1 MSLIFLDYDGTLVPII----MNPEESYADAGLLSLISDLKERF-DTYIVTGRSPEE-ISRFLPLD 59 (239)
T ss_dssp -CEEEEECBTTTBCCC----SCGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHH-HHHHSCSS
T ss_pred CeEEEEecCCCCcCCC----CCcccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHH-HHHHhccc
Confidence 4789999999999731 01112346688999999999999 999999999877 46665544
No 124
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=99.02 E-value=1.2e-10 Score=77.21 Aligned_cols=55 Identities=27% Similarity=0.362 Sum_probs=45.1
Q ss_pred ceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcC
Q 034147 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 23 ~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
|+++||+||||++.. . ..+.+...+++++++++|++++++||++ .. +...++.++
T Consensus 3 kli~~DlDGTLl~~~------~--~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~-~~~~~~~l~ 57 (261)
T 2rbk_A 3 KALFFDIDGTLVSFE------T--HRIPSSTIEALEAAHAKGLKIFIATGRP-KA-IINNLSELQ 57 (261)
T ss_dssp CEEEECSBTTTBCTT------T--SSCCHHHHHHHHHHHHTTCEEEEECSSC-GG-GCCSCHHHH
T ss_pred cEEEEeCCCCCcCCC------C--CcCCHHHHHHHHHHHHCCCEEEEECCCh-HH-HHHHHHHhC
Confidence 789999999999731 1 1256789999999999999999999999 87 466667766
No 125
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=99.02 E-value=4e-10 Score=73.06 Aligned_cols=49 Identities=16% Similarity=0.122 Sum_probs=40.6
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.|+++ ++++++||++... +...++.+++. | +.+++++
T Consensus 115 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~-~~~~l~~~~~~--f--~~~~~~~ 163 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAE-YIIGPLSNGNTSL-LLDMAKNAGIP--W--DVIIGSD 163 (254)
T ss_dssp CCBCTTHHHHHHHHHHH-SEEEECSSSCHHH-HHHHHHHHTCC--C--SCCCCHH
T ss_pred CcCCcCHHHHHHHHHhC-CeEEEEeCCCHHH-HHHHHHhCCCC--e--eEEEEcC
Confidence 35789999999999997 9999999999877 58889999985 5 6665543
No 126
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.00 E-value=1.4e-10 Score=82.24 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=38.6
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCC--CchhHHHHHHHHc--CCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRS--PAPDIAKTFLHKL--GIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~--~~~~i~~~~l~~~--~l~~~~~~~~i~~~~ 101 (103)
..++||+.++|++|+++|++++|+||+ .... ....+... ++..+| +.+++++
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~-~~~~~~~~~~~l~~~f--d~i~~~~ 154 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRA-ERDGLAQLMCELKMHF--DFLIESC 154 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCST-THHHHHHHHHHHHTTS--SEEEEHH
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccc-hhhHHHHHhhhhhhhe--eEEEecc
Confidence 357899999999999999999999998 2222 13333433 677788 8888764
No 127
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=99.00 E-value=7.2e-10 Score=72.50 Aligned_cols=50 Identities=8% Similarity=0.099 Sum_probs=42.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeec
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~ 100 (103)
..++|++.++++.|+ +|++++++|+++... +...++.+++..+| +.++++
T Consensus 111 ~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~-~~~~l~~~~l~~~f--~~i~~~ 160 (251)
T 2pke_A 111 VEVIAGVREAVAAIA-ADYAVVLITKGDLFH-QEQKIEQSGLSDLF--PRIEVV 160 (251)
T ss_dssp CCBCTTHHHHHHHHH-TTSEEEEEEESCHHH-HHHHHHHHSGGGTC--CCEEEE
T ss_pred CCcCccHHHHHHHHH-CCCEEEEEeCCCHHH-HHHHHHHcCcHHhC--ceeeee
Confidence 356799999999999 899999999999777 58899999998888 676653
No 128
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=99.00 E-value=4.1e-10 Score=75.09 Aligned_cols=53 Identities=23% Similarity=0.118 Sum_probs=44.0
Q ss_pred CCcccChhHHHHHHHHHHC-CCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 45 EIPYLYPHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 45 ~~~~~~~g~~~~l~~l~~~-G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
....++|++.++++.|++. |++++++|++.... +...++.+++. .| +.+++++
T Consensus 111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~-~~~~l~~~~l~-~f--~~i~~~~ 164 (275)
T 2qlt_A 111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDM-AKKWFDILKIK-RP--EYFITAN 164 (275)
T ss_dssp TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHH-HHHHHHHHTCC-CC--SSEECGG
T ss_pred cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHH-HHHHHHHcCCC-cc--CEEEEcc
Confidence 3456789999999999999 99999999999877 58899999986 35 6666654
No 129
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=98.99 E-value=4.8e-10 Score=72.99 Aligned_cols=49 Identities=16% Similarity=0.137 Sum_probs=40.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.|++. ++++++|+++... +...++.+++. | +.+++++
T Consensus 119 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~-~~~~l~~~g~~--f--~~~~~~~ 167 (254)
T 3umc_A 119 LRPWPDTLAGMHALKAD-YWLAALSNGNTAL-MLDVARHAGLP--W--DMLLCAD 167 (254)
T ss_dssp CEECTTHHHHHHHHTTT-SEEEECCSSCHHH-HHHHHHHHTCC--C--SEECCHH
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHH-HHHHHHHcCCC--c--ceEEeec
Confidence 35789999999999986 9999999999877 58899999985 6 7776654
No 130
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=98.99 E-value=4.5e-10 Score=77.70 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=40.8
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeec
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~ 100 (103)
+++|++.++++.|+++|+.+.|||+++... ++.+.+..+...-+..+.|++.
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~-v~~~a~~~~~~ygIp~e~ViG~ 194 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEEL-VRMVAADPRYGYNAKPENVIGV 194 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHTCGGGSCCCCGGGEEEE
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHHhhcccccCCCHHHeEee
Confidence 689999999999999999999999999777 6888887533222333566654
No 131
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=98.99 E-value=8.4e-10 Score=72.69 Aligned_cols=47 Identities=28% Similarity=0.349 Sum_probs=39.7
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchh
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPD 77 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~ 77 (103)
.+++++||+||||++. . ..+.+.+.++|++|+++ ++++++|||+...
T Consensus 5 ~~kli~~DlDGTLl~~------~---~~i~~~~~~al~~l~~~-i~v~iaTGR~~~~ 51 (246)
T 2amy_A 5 GPALCLFDVDGTLTAP------R---QKITKEMDDFLQKLRQK-IKIGVVGGSDFEK 51 (246)
T ss_dssp CSEEEEEESBTTTBCT------T---SCCCHHHHHHHHHHTTT-SEEEEECSSCHHH
T ss_pred CceEEEEECCCCcCCC------C---cccCHHHHHHHHHHHhC-CeEEEEcCCCHHH
Confidence 5789999999999973 1 23558899999999999 9999999998654
No 132
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=98.97 E-value=2.3e-09 Score=70.27 Aligned_cols=62 Identities=16% Similarity=0.133 Sum_probs=48.0
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe---CCCchhHHHHHHHHcCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS---RSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T---~~~~~~i~~~~l~~~~l~ 89 (103)
.+++++||+||||++.. .....+.++..+.++.++++|++++++| +++... ....+..+|+.
T Consensus 11 ~~k~i~fDlDGTLl~s~------~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~-~~~~l~~~g~~ 75 (271)
T 2x4d_A 11 GVRGVLLDISGVLYDSG------AGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAE-LVGQLQRLGFD 75 (271)
T ss_dssp TCCEEEECCBTTTEECC------TTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHH-HHHHHHHTTCC
T ss_pred cCCEEEEeCCCeEEecC------CCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHH-HHHHHHHCCCC
Confidence 47999999999999731 0012356788999999999999999999 777666 36677777764
No 133
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=98.97 E-value=5e-10 Score=71.91 Aligned_cols=46 Identities=22% Similarity=0.418 Sum_probs=38.3
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeecc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSCC 101 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~~ 101 (103)
..++|++.++++.|+++ ++++++||++.. ++.+++..+| +.+++++
T Consensus 104 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~------l~~~~l~~~f--~~~~~~~ 149 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKT-FTLGVITNGNAD------VRRLGLADYF--AFALCAE 149 (230)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEESSCCC------GGGSTTGGGC--SEEEEHH
T ss_pred CccCcCHHHHHHHHHhC-CeEEEEECCchh------hhhcCcHHHe--eeeEEcc
Confidence 45889999999999998 999999998854 4678888888 7777654
No 134
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=98.95 E-value=1.3e-09 Score=72.62 Aligned_cols=52 Identities=27% Similarity=0.368 Sum_probs=41.6
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHH
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFL 83 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l 83 (103)
.+++++||+||||++. . ..+.+...+.|++|+++ ++++++|||+...+ ...+
T Consensus 12 ~~kli~~DlDGTLl~~------~---~~is~~~~~al~~l~~~-i~v~iaTGR~~~~~-~~~l 63 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPA------R---QKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKI-AEQL 63 (262)
T ss_dssp -CEEEEEESBTTTBST------T---SCCCHHHHHHHHHHTTT-SEEEEECSSCHHHH-HHHH
T ss_pred CeEEEEEeCccCCCCC------C---CcCCHHHHHHHHHHHhC-CEEEEEcCCCHHHH-HHHH
Confidence 4799999999999973 1 23558899999999999 99999999987663 4444
No 135
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.95 E-value=1.1e-09 Score=72.57 Aligned_cols=52 Identities=27% Similarity=0.333 Sum_probs=42.7
Q ss_pred eEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 24 LVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 24 ~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+++||+||||++. . .+.+.+.++|++++++|++++++||++...+ . .+++..
T Consensus 2 li~~DlDGTLl~~------~----~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~-~----~l~~~~ 53 (259)
T 3zx4_A 2 IVFTDLDGTLLDE------R----GELGPAREALERLRALGVPVVPVTAKTRKEV-E----ALGLEP 53 (259)
T ss_dssp EEEECCCCCCSCS------S----SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHH-H----HTTCCS
T ss_pred EEEEeCCCCCcCC------C----cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHH-H----HcCCCC
Confidence 6899999999973 1 3557889999999999999999999997763 4 666643
No 136
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=98.93 E-value=4e-09 Score=68.02 Aligned_cols=57 Identities=19% Similarity=0.303 Sum_probs=43.3
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe---CCCchhHHHHHHHHcCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS---RSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T---~~~~~~i~~~~l~~~~l~ 89 (103)
+|+++||+||||++.. ...+...++++.+++.|+++.++| +++...+ ...+..+|+.
T Consensus 3 ~k~i~fDlDGTLl~~~----------~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~-~~~~~~~g~~ 62 (250)
T 2c4n_A 3 IKNVICDIDGVLMHDN----------VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDL-ANRFATAGVD 62 (250)
T ss_dssp CCEEEEECBTTTEETT----------EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHH-HHHHHHTTCC
T ss_pred ccEEEEcCcceEEeCC----------EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHH-HHHHHHcCCC
Confidence 6899999999999831 233455889999999999999999 6665563 5556666653
No 137
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=98.90 E-value=6.6e-09 Score=69.65 Aligned_cols=58 Identities=12% Similarity=0.096 Sum_probs=45.4
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHH--------HHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILE--------ALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~--------~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.+++++||+||||+++. +.+...+.+. .+++.|++++++||++... +...++.+++..
T Consensus 21 ~~kliifDlDGTLlds~-----------i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~-~~~~~~~~g~~~ 86 (289)
T 3gyg_A 21 PQYIVFCDFDETYFPHT-----------IDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIES-ILDKMGRGKFRY 86 (289)
T ss_dssp CSEEEEEETBTTTBCSS-----------CCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHH-HHHHHHHTTCCB
T ss_pred CCeEEEEECCCCCcCCC-----------CCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHH-HHHHHHhhccCC
Confidence 57899999999999831 3345555555 4577899999999999888 588899888753
No 138
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=98.87 E-value=4.3e-09 Score=70.18 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=28.7
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
.++||+.++|++ |++++|+||++... ++..++++
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~-~~~~l~~~ 158 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKA-QKLLFGYV 158 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHH-HHHHHHSB
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHH-HHHHHHhh
Confidence 567888888877 89999999999887 58888877
No 139
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=98.83 E-value=5.2e-09 Score=73.75 Aligned_cols=52 Identities=15% Similarity=0.099 Sum_probs=42.9
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeec
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~ 100 (103)
+++|++.++++.|+++|+++.|||++.... ++.+.+++|+..-+..+.|++.
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~-v~~ia~~lg~~y~ip~~~Vig~ 272 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDI-VRAFATDTNNNYKMKEEKVLGL 272 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHCTTSSCCCCGGGEEEE
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHH-HHHHHHHhCcccCCCcceEEEe
Confidence 479999999999999999999999999887 6999999887544444555543
No 140
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=98.78 E-value=3.5e-09 Score=69.88 Aligned_cols=55 Identities=20% Similarity=0.210 Sum_probs=43.2
Q ss_pred ceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 23 ~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
.++++|+||||++. . ...+...+++++++ +|++++++|||+... +...++.+++.
T Consensus 4 ~li~~DlDGTLl~~------~----~~~~~~~~~l~~~~-~gi~v~iaTGR~~~~-~~~~~~~l~l~ 58 (244)
T 1s2o_A 4 LLLISDLDNTWVGD------Q----QALEHLQEYLGDRR-GNFYLAYATGRSYHS-ARELQKQVGLM 58 (244)
T ss_dssp EEEEECTBTTTBSC------H----HHHHHHHHHHHTTG-GGEEEEEECSSCHHH-HHHHHHHHTCC
T ss_pred eEEEEeCCCCCcCC------H----HHHHHHHHHHHHhc-CCCEEEEEcCCCHHH-HHHHHHHcCCC
Confidence 38999999999973 1 11256777888766 589999999999888 58888888764
No 141
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=98.75 E-value=4.8e-09 Score=71.99 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=41.5
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~ 93 (103)
...++||+.++++.|+++|++++++||+.... ++..++++|+..+|.
T Consensus 176 ~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~-~~~~~~~lgl~~~~~ 222 (335)
T 3n28_A 176 TLPLMPELPELVATLHAFGWKVAIASGGFTYF-SDYLKEQLSLDYAQS 222 (335)
T ss_dssp TCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHH-HHHHHHHHTCSEEEE
T ss_pred hCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHH-HHHHHHHcCCCeEEe
Confidence 34688999999999999999999999999777 699999999987763
No 142
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=98.71 E-value=6.3e-08 Score=65.31 Aligned_cols=74 Identities=16% Similarity=0.229 Sum_probs=53.3
Q ss_pred CceEEEeCCCCccccccc----ccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchh--HHHHHHHH--------cC
Q 034147 22 PRLVVFDLDYTLWPFYCE----CCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPD--IAKTFLHK--------LG 87 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~----~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~--i~~~~l~~--------~~ 87 (103)
++.+++|.|||+.+.... |. ......++||+.++|+.|+++|++++++||++... .+...+++ +|
T Consensus 159 ~~~i~iD~dgtl~~~~~~~~~~~~-~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~ 237 (301)
T 1ltq_A 159 PKAVIFDVDGTLAKMNGRGPYDLE-KCDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAG 237 (301)
T ss_dssp CEEEEEETBTTTBCCSSCCTTCGG-GGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTC
T ss_pred cceEEEeCCCCcccccCCCchhhh-hccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccC
Confidence 477889999998763211 11 11234689999999999999999999999998542 02556777 88
Q ss_pred CCCccccCeeeec
Q 034147 88 IHSMFVPMVRLSC 100 (103)
Q Consensus 88 l~~~~~~~~i~~~ 100 (103)
+ +| +.++++
T Consensus 238 ~--~~--~~~~~~ 246 (301)
T 1ltq_A 238 V--PL--VMQCQR 246 (301)
T ss_dssp C--CC--SEEEEC
T ss_pred C--Cc--hheeec
Confidence 8 35 666654
No 143
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=98.63 E-value=4.1e-08 Score=66.07 Aligned_cols=69 Identities=17% Similarity=0.123 Sum_probs=57.0
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeee
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRL 98 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~ 98 (103)
..+++++|+|+++... ......++||+.++|+.|+++|++++++||++... ++..++.+|+..+| +.++
T Consensus 142 g~~~i~~~~d~~~~~~------~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~l~~~gl~~~f--~~i~ 210 (287)
T 3a1c_A 142 AKTAVIVARNGRVEGI------IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS-AEAISRELNLDLVI--AEVL 210 (287)
T ss_dssp TCEEEEEEETTEEEEE------EEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCSEEE--CSCC
T ss_pred CCeEEEEEECCEEEEE------EEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHH-HHHHHHHhCCceee--eecC
Confidence 4578999999998752 12235689999999999999999999999999887 69999999998887 5443
No 144
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=98.62 E-value=1.4e-08 Score=64.98 Aligned_cols=49 Identities=20% Similarity=0.199 Sum_probs=36.9
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeeec
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLSC 100 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~~ 100 (103)
..++|++.++++.++. +++++|+++... ....++++++..+|. +.++++
T Consensus 86 ~~~~~~~~~~l~~l~~---~~~i~s~~~~~~-~~~~l~~~~l~~~~~-~~~~~~ 134 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT---PRCICSNSSSHR-LDMMLTKVGLKPYFA-PHIYSA 134 (229)
T ss_dssp CCBCTTHHHHHHHCCS---CEEEEESSCHHH-HHHHHHHTTCGGGTT-TCEEEH
T ss_pred CccCcCHHHHHHHhCC---CEEEEECCChhH-HHHHHHhCChHHhcc-ceEEec
Confidence 3567888888887764 899999999877 588899999877662 334443
No 145
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=98.61 E-value=7.9e-08 Score=62.50 Aligned_cols=69 Identities=16% Similarity=-0.007 Sum_probs=54.1
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC-cc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS-MF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~-~~ 92 (103)
.+.++++|+|+||+...... ..+-.....||+.++|+++. +++.++|.|++.... ++..++.++... +|
T Consensus 33 ~~~tLVLDLDeTLvh~~~~~-~~~~~v~~RPgl~eFL~~l~-~~yeivI~Tas~~~y-a~~vl~~LDp~~~~f 102 (204)
T 3qle_A 33 RPLTLVITLEDFLVHSEWSQ-KHGWRTAKRPGADYFLGYLS-QYYEIVLFSSNYMMY-SDKIAEKLDPIHAFV 102 (204)
T ss_dssp CSEEEEEECBTTTEEEEEET-TTEEEEEECTTHHHHHHHHT-TTEEEEEECSSCHHH-HHHHHHHTSTTCSSE
T ss_pred CCeEEEEeccccEEeeeccc-cCceeEEeCCCHHHHHHHHH-hCCEEEEEcCCcHHH-HHHHHHHhCCCCCeE
Confidence 35789999999999743211 11123567899999999998 579999999999888 799999998763 66
No 146
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=98.01 E-value=5.8e-09 Score=69.65 Aligned_cols=48 Identities=23% Similarity=0.337 Sum_probs=42.5
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeee
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRL 98 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~ 98 (103)
.++||+.++|++|+++|++++++||++... ++..++++|+.++| ..++
T Consensus 136 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~-~~~~~~~~gl~~~f--~~~~ 183 (263)
T 2yj3_A 136 VPRPNLKDYLEKLKNEGLKIIILSGDKEDK-VKELSKELNIQEYY--SNLS 183 (263)
Confidence 478999999999999999999999999888 69999999998887 5443
No 147
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=98.53 E-value=1.6e-07 Score=65.92 Aligned_cols=77 Identities=14% Similarity=0.058 Sum_probs=57.3
Q ss_pred CCceEEEeCCCCccccccc-----cc--------------------------ccCCCcccChhHHHHHHHHHHCCCeEEE
Q 034147 21 LPRLVVFDLDYTLWPFYCE-----CC--------------------------YEDEIPYLYPHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~-----~~--------------------------~~~~~~~~~~g~~~~l~~l~~~G~~v~i 69 (103)
.++.++||+||||+..... |. ...-.....||+.++|+++. .++.++|
T Consensus 17 ~k~~LVlDLD~TLvhS~~~~~~~~w~~~~~~~~~~~~~dv~~f~~~~~~~~~~~~~~v~~RPg~~eFL~~l~-~~yeivI 95 (372)
T 3ef0_A 17 KRLSLIVDLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKIS-ELYELHI 95 (372)
T ss_dssp TCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHH-TTEEEEE
T ss_pred CCCEEEEcCCCCcccccCcCccchhhccCCCCchhhhhhhhceeeeeccCCceEEEEEEECcCHHHHHHHHh-cCcEEEE
Confidence 4678999999999986211 00 01112345799999999999 5799999
Q ss_pred EeCCCchhHHHHHHHHcCCCC-ccccCeeeec
Q 034147 70 ASRSPAPDIAKTFLHKLGIHS-MFVPMVRLSC 100 (103)
Q Consensus 70 ~T~~~~~~i~~~~l~~~~l~~-~~~~~~i~~~ 100 (103)
+|++.... +...++.++... +|. ..+++.
T Consensus 96 ~Tas~~~y-A~~vl~~LDp~~~~f~-~ri~sr 125 (372)
T 3ef0_A 96 YTMGTKAY-AKEVAKIIDPTGKLFQ-DRVLSR 125 (372)
T ss_dssp ECSSCHHH-HHHHHHHHCTTSCSSS-SCEECT
T ss_pred EeCCcHHH-HHHHHHHhccCCceee-eEEEEe
Confidence 99999888 899999999877 562 256643
No 148
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=98.45 E-value=3.6e-07 Score=61.70 Aligned_cols=44 Identities=16% Similarity=0.168 Sum_probs=39.3
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
..++.||+.++++.|+++|++++++|+..... ++..++++|+..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~-i~~i~~~~g~~~ 182 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDV-LEEVIRQAGVYH 182 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHH-HHHHHHHTTCCC
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHH-HHHHHHHcCCCc
Confidence 35688999999999999999999999998777 699999999754
No 149
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=98.44 E-value=8.3e-07 Score=61.24 Aligned_cols=68 Identities=22% Similarity=0.274 Sum_probs=53.5
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~ 91 (103)
...+++++|+||||+.... ..........||+.++|+++.+ .+.++|.|++.... +...++.++....
T Consensus 138 ~~k~tLVLDLDeTLvh~~~--~~~~~~~~~RP~l~eFL~~l~~-~yeivIfTas~~~y-a~~vld~Ld~~~~ 205 (320)
T 3shq_A 138 EGKKLLVLDIDYTLFDHRS--PAETGTELMRPYLHEFLTSAYE-DYDIVIWSATSMRW-IEEKMRLLGVASN 205 (320)
T ss_dssp TTCEEEEECCBTTTBCSSS--CCSSHHHHBCTTHHHHHHHHHH-HEEEEEECSSCHHH-HHHHHHHTTCTTC
T ss_pred CCCcEEEEeccccEEcccc--cCCCcceEeCCCHHHHHHHHHh-CCEEEEEcCCcHHH-HHHHHHHhCCCCC
Confidence 3468899999999997532 1122234577999999999996 59999999999888 7999999876543
No 150
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=98.39 E-value=3.7e-07 Score=64.35 Aligned_cols=53 Identities=21% Similarity=0.300 Sum_probs=47.2
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccC--eeeecc
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPM--VRLSCC 101 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~--~i~~~~ 101 (103)
...++||+.++|+.|+++|++++|+||++... +...++++|+..+| + .+++++
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~-~~~~L~~lgL~~~F--d~~~Ivs~d 267 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTE-TVVPFENLGLLPYF--EADFIATAS 267 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCGGGS--CGGGEECHH
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHH-HHHHHHHcCChHhc--CCCEEEecc
Confidence 34688999999999999999999999999888 69999999999999 6 787764
No 151
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=98.16 E-value=4.9e-06 Score=55.22 Aligned_cols=51 Identities=12% Similarity=0.176 Sum_probs=44.0
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc---CCCCccccCeeeec
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL---GIHSMFVPMVRLSC 100 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~---~l~~~~~~~~i~~~ 100 (103)
..++||+.++|+.|+++|++++|+||++... ++..++++ ++..+| +.++++
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~-~~~~l~~~~~~~l~~~f--d~i~~~ 182 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEA-QKLLFGHSTEGDILELV--DGHFDT 182 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHTBTTBCCGGGC--SEEECG
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHH-HHHHHHhhcccChHhhc--cEEEec
Confidence 4688999999999999999999999999877 58888855 588889 888775
No 152
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=97.84 E-value=8.8e-07 Score=60.68 Aligned_cols=40 Identities=8% Similarity=-0.231 Sum_probs=32.2
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
++++++||+||||++.+ .. +.+.+++..|+.++++||++.
T Consensus 20 ~~kli~fDlDGTLld~~--------------~~-~~l~~~~~~g~~~~~~tGR~~ 59 (332)
T 1y8a_A 20 QGHMFFTDWEGPWILTD--------------FA-LELCMAVFNNARFFSNLSEYD 59 (332)
T ss_dssp CCCEEEECSBTTTBCCC--------------HH-HHHHHHHHCCHHHHHHHHHHH
T ss_pred CceEEEEECcCCCcCcc--------------HH-HHHHHHHHCCCEEEEEcCCCc
Confidence 47899999999999731 11 677788888989999998876
No 153
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=97.63 E-value=0.00018 Score=51.52 Aligned_cols=76 Identities=14% Similarity=0.051 Sum_probs=55.2
Q ss_pred CCceEEEeCCCCcccccccc----------cc---------------------cCCCcccChhHHHHHHHHHHCCCeEEE
Q 034147 21 LPRLVVFDLDYTLWPFYCEC----------CY---------------------EDEIPYLYPHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~----------~~---------------------~~~~~~~~~g~~~~l~~l~~~G~~v~i 69 (103)
....+++|+|.||+.....- +. ..-.....||+.++|+++.+ .+.++|
T Consensus 25 ~Kl~LVLDLDeTLiHs~~~~~~~~~~~~~~~~~~~~~~dv~~F~l~~~~~~~~~~~~V~~RPgl~eFL~~ls~-~yEivI 103 (442)
T 3ef1_A 25 KRLSLIVXLDQTIIHATVDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCYYIKFRPGLAQFLQKISE-LYELHI 103 (442)
T ss_dssp TCEEEEECCBTTTEEEECCTHHHHHHTCTTSTTTGGGTTCEEEEEEETTTTEEEEEEEEECTTHHHHHHHHTT-TEEEEE
T ss_pred CCeEEEEeeccceeccccccccchhccCCCCcchhhhccccceeeeeccCCceeEEEEEeCCCHHHHHHHHhC-CcEEEE
Confidence 45668999999999753210 00 01123457999999999995 699999
Q ss_pred EeCCCchhHHHHHHHHcCCCC-ccccCeeee
Q 034147 70 ASRSPAPDIAKTFLHKLGIHS-MFVPMVRLS 99 (103)
Q Consensus 70 ~T~~~~~~i~~~~l~~~~l~~-~~~~~~i~~ 99 (103)
.|.+.... |...++.++... +|. ..+|+
T Consensus 104 fTas~~~Y-A~~Vl~~LDp~~~~f~-~Rl~s 132 (442)
T 3ef1_A 104 YTMGTKAY-AKEVAKIIDPTGKLFQ-DRVLS 132 (442)
T ss_dssp ECSSCHHH-HHHHHHHHCTTSTTTT-TCEEC
T ss_pred EcCCCHHH-HHHHHHHhccCCcccc-ceEEE
Confidence 99999888 899999998766 452 33553
No 154
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=97.22 E-value=0.00067 Score=50.63 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=53.2
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..+.+++..|+++.-. ..-..++.|++.+.+++|+++|++++++||.+... +....+++|+..++
T Consensus 436 g~~~l~va~~~~~~G~------i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~-a~~ia~~lgi~~~~ 500 (645)
T 3j08_A 436 AKTAVIVARNGRVEGI------IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS-AEAISRELNLDLVI 500 (645)
T ss_dssp TCCCEEEEETTEEEEE------EEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCSEEE
T ss_pred CCeEEEEEECCEEEEE------EEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHcCCCEEE
Confidence 3566888889988642 12234578999999999999999999999999888 79999999997655
No 155
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=97.03 E-value=0.00079 Score=51.04 Aligned_cols=65 Identities=12% Similarity=0.144 Sum_probs=53.4
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..+++++..||++.-. ..-..++.|++.+.+++|+++|++++++||.+... +....+.+|+..++
T Consensus 533 G~~vl~va~d~~~~G~------i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~-a~~ia~~lgi~~v~ 597 (736)
T 3rfu_A 533 GASVMFMAVDGKTVAL------LVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRT-AEAVAGTLGIKKVV 597 (736)
T ss_dssp TCEEEEEEETTEEEEE------EEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHH-HHHHHHHHTCCCEE
T ss_pred CCeEEEEEECCEEEEE------EEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHH-HHHHHHHcCCCEEE
Confidence 4677889999998742 11123577899999999999999999999999888 79999999997655
No 156
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=96.96 E-value=0.00019 Score=47.50 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=14.4
Q ss_pred CCceEEEeCCCCcccc
Q 034147 21 LPRLVVFDLDYTLWPF 36 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~ 36 (103)
.+++++||+||||++.
T Consensus 9 ~ikaviFDlDGTL~ds 24 (261)
T 1yns_A 9 EVTVILLDIEGTTTPI 24 (261)
T ss_dssp TCCEEEECCBTTTBCH
T ss_pred CCCEEEEecCCCccch
Confidence 4899999999999984
No 157
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=96.93 E-value=0.0019 Score=48.76 Aligned_cols=65 Identities=17% Similarity=0.133 Sum_probs=53.3
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..+.+++..||++.-. ..-..++.|++.+.+++|++.|++++++||.+... +....+.+|+...+
T Consensus 514 g~~~~~va~~~~~~G~------i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~-a~~ia~~lgi~~~~ 578 (723)
T 3j09_A 514 AKTAVIVARNGRVEGI------IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS-AEAISRELNLDLVI 578 (723)
T ss_dssp TCEEEEEEETTEEEEE------EEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTCSEEE
T ss_pred CCeEEEEEECCEEEEE------EeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHH-HHHHHHHcCCcEEE
Confidence 4577888889988742 12234578999999999999999999999999888 79999999997655
No 158
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=96.56 E-value=0.029 Score=33.11 Aligned_cols=84 Identities=14% Similarity=0.097 Sum_probs=55.2
Q ss_pred CcHHHhhHHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHH
Q 034147 2 GDLEKVKNEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKT 81 (103)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~ 81 (103)
++++..++...+.+.......+.+++|+-++-.- ...-.....++.+.++++|..+.++.-++ . +..
T Consensus 28 ~~a~~~~~~l~~~~~~~~~~~~~vvlDls~v~~i----------Dssgl~~L~~~~~~~~~~g~~l~l~~~~~--~-v~~ 94 (130)
T 2kln_A 28 ANAEDFRRRALTVVDQDPGQVEWFVLNAESNVEV----------DLTALDALDQLRTELLRRGIVFAMARVKQ--D-LRE 94 (130)
T ss_dssp TTHHHHHHHHHHHTTSSSSCCEEEEEECSCCSSS----------BCSTTTHHHHHHHHHHTTTEEEEEECCSS--H-HHH
T ss_pred chHHHHHHHHHHHHhcCCCCceEEEEECCCCChh----------hHHHHHHHHHHHHHHHHCCCEEEEEcCCH--H-HHH
Confidence 3456666666666654322467899999887542 11122457788899999999998775544 4 488
Q ss_pred HHHHcCCCCccccCeee
Q 034147 82 FLHKLGIHSMFVPMVRL 98 (103)
Q Consensus 82 ~l~~~~l~~~~~~~~i~ 98 (103)
.++..|+...+....++
T Consensus 95 ~l~~~gl~~~~~~~~i~ 111 (130)
T 2kln_A 95 SLRAASLLDKIGEDHIF 111 (130)
T ss_dssp HHHHCTTHHHHCTTEEE
T ss_pred HHHHcCChhhcCcceeE
Confidence 89999987655333444
No 159
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=96.36 E-value=0.007 Score=44.54 Aligned_cols=39 Identities=21% Similarity=0.140 Sum_probs=34.2
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc-C
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL-G 87 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~-~ 87 (103)
....|++..+|+++++.| +++++||++... +...++.+ |
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~y-v~~~m~yllg 284 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKY-TDKIMTYLFD 284 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHH-HHHHHHHHTC
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHH-HHHHHHHhcC
Confidence 345578999999999999 999999999988 69999887 6
No 160
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=96.27 E-value=0.0019 Score=43.12 Aligned_cols=17 Identities=29% Similarity=0.020 Sum_probs=14.8
Q ss_pred CceEEEeCCCCcccccc
Q 034147 22 PRLVVFDLDYTLWPFYC 38 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~ 38 (103)
+++++||+||||+++..
T Consensus 32 i~~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 32 VTAVIFDKTGTLTKGKP 48 (287)
T ss_dssp CCEEEEECCCCCBCSCC
T ss_pred CCEEEEeCCCCCcCCCE
Confidence 67899999999999654
No 161
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=95.33 E-value=0.036 Score=40.10 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=40.9
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc---------CCCCccccCeeeecc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL---------GIHSMFVPMVRLSCC 101 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~---------~l~~~~~~~~i~~~~ 101 (103)
..|....+|++|++.|.++.++||++... +...+..+ +|.++| |.|++..
T Consensus 187 k~~~l~~~L~~lr~~GKklFLiTNS~~~y-~~~~M~y~~~~~~~~g~dWrdlF--DvVIv~A 245 (470)
T 4g63_A 187 REKEVVEGLKHFIRYGKKIFILTNSEYSY-SKLLLDYALSPFLDKGEHWQGLF--EFVITLA 245 (470)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEECSSCHHH-HHHHHHHHTGGGSCTTCCGGGGC--SEEEESC
T ss_pred CCHhHHHHHHHHHHcCCeEEEeeCCCchH-HHHHHHhhcccCCCCCCChhhhc--CEEEECC
Confidence 45788999999999999999999999888 68887763 466688 8777653
No 162
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=95.33 E-value=0.025 Score=44.34 Aligned_cols=42 Identities=17% Similarity=0.151 Sum_probs=38.4
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
.++.|++.+.+++|++.|+++.++||++... +....+.+|+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~t-A~~ia~~lgi~ 644 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPIT-AKAIAASVGII 644 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHH-HHHHHHHcCCC
Confidence 4688999999999999999999999999888 79999999985
No 163
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=95.29 E-value=0.03 Score=43.67 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=39.4
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~ 91 (103)
.++.|++.+.+++|++.|+++.++||..... +....+++|+...
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~t-a~~ia~~lgi~~~ 645 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGT-AIAICRRIGIFGE 645 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHTSSCT
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHH-HHHHHHHcCcCCC
Confidence 3578999999999999999999999999887 7999999999653
No 164
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=95.27 E-value=0.007 Score=42.60 Aligned_cols=19 Identities=16% Similarity=0.114 Sum_probs=15.2
Q ss_pred CceEEEeCCCCcccccccc
Q 034147 22 PRLVVFDLDYTLWPFYCEC 40 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~ 40 (103)
+|.|+||+|||+++-+.++
T Consensus 1 ~~~~~fdvdgv~~~~~~~~ 19 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCF 19 (384)
T ss_dssp CCEEEECSBTTTBCSHHHH
T ss_pred CceEEEecCceeechhhhc
Confidence 4679999999999865553
No 165
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=95.26 E-value=0.029 Score=44.01 Aligned_cols=42 Identities=17% Similarity=0.167 Sum_probs=38.5
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
.++.|++.+.+++|++.|+++.++||.+... +....+.+|+.
T Consensus 598 Dplr~~~~~aI~~l~~aGI~v~miTGD~~~t-A~~ia~~lgi~ 639 (1028)
T 2zxe_A 598 DPPRAAVPDAVGKCRSAGIKVIMVTGDHPIT-AKAIAKGVGII 639 (1028)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHH-HHHHHHHHTSS
T ss_pred CCCChhHHHHHHHHHHcCCEEEEECCCCHHH-HHHHHHHcCCC
Confidence 3678999999999999999999999999888 79999999986
No 166
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=94.30 E-value=0.23 Score=29.52 Aligned_cols=59 Identities=17% Similarity=0.065 Sum_probs=41.1
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..+.+++|+-++-.- ...-......+.+.++++|..+.++.-+ +. +...++..|+...+
T Consensus 63 ~~~~vvlDls~v~~i----------Dssgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~ 121 (143)
T 3llo_A 63 NIHTVILDFTQVNFM----------DSVGVKTLAGIVKEYGDVGIYVYLAGCS--AQ-VVNDLTSNRFFENP 121 (143)
T ss_dssp CCSEEEEECTTCCCC----------CHHHHHHHHHHHHHHHTTTCEEEEESCC--HH-HHHHHHHTTTTSSG
T ss_pred CceEEEEECCCCccc----------cHHHHHHHHHHHHHHHHCCCEEEEEeCC--HH-HHHHHHhCCCeecc
Confidence 467899999887442 1112234566778889999999987433 45 48889999988765
No 167
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=94.11 E-value=0.067 Score=41.66 Aligned_cols=44 Identities=11% Similarity=0.107 Sum_probs=39.7
Q ss_pred CcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 46 IPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
..++.|++.+.+++|++.|+++.++||..... +....+++|+..
T Consensus 533 ~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~T-A~aIA~~lGI~~ 576 (920)
T 1mhs_A 533 MDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGI-ARETSRQLGLGT 576 (920)
T ss_dssp CCCCCHHHHHHHHHHHHHTCEEEEEESSCHHH-HHHHHHHHTSSC
T ss_pred eccccccHHHHHHHHhhcCceEEEEcCCCHHH-HHHHHHHcCCCc
Confidence 45688999999999999999999999999887 799999999863
No 168
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=94.06 E-value=0.11 Score=30.20 Aligned_cols=65 Identities=14% Similarity=0.087 Sum_probs=41.9
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeeee
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRLS 99 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~~ 99 (103)
..+.+++|+-++-.- ......-..++.+++++ |..+.++.-+ +. +...++..|+...+..+.++.
T Consensus 45 ~~~~vilDl~~v~~i----------Dssgl~~L~~~~~~~~~-g~~l~l~~~~--~~-v~~~l~~~gl~~~~~~~~i~~ 109 (118)
T 3ny7_A 45 GKRIVILKWDAVPVL----------DAGGLDAFQRFVKRLPE-GCELRVCNVE--FQ-PLRTMARAGIQPIPGRLAFFP 109 (118)
T ss_dssp TCSEEEEEEEECCCB----------CHHHHHHHHHHHHHCCT-TCEEEEECCC--HH-HHHHHHHTTCCCBTTTEEEES
T ss_pred CCcEEEEEcCCCCee----------cHHHHHHHHHHHHHHHC-CCEEEEecCC--HH-HHHHHHHcCChhhcChhhhcC
Confidence 467899999776432 11112334566777888 9998877433 45 488899999987664334543
No 169
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=94.06 E-value=0.058 Score=41.77 Aligned_cols=43 Identities=12% Similarity=0.104 Sum_probs=38.6
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++.|++.+.+++|++.|+++.++||..... +....+++|+..
T Consensus 487 Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~t-A~~iA~~lGi~~ 529 (885)
T 3b8c_A 487 DPPRHDSAETIRRALNLGVNVKMITGDQLAI-GKETGRRLGMGT 529 (885)
T ss_dssp CCCCHHHHHHHHHHHHTTCCCEEEESSCHHH-HTHHHHTTTCTT
T ss_pred cccchhHHHHHHHHHHcCCcEEEEcCCChHH-HHHHHHHhCCcc
Confidence 4678999999999999999999999999877 789999999853
No 170
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=93.53 E-value=0.31 Score=28.50 Aligned_cols=66 Identities=14% Similarity=0.241 Sum_probs=42.9
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccccCeee
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVPMVRL 98 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~~~i~ 98 (103)
...+.+++|+-++-.- ...-..-..++.++++++|..+.++.-+ +. +...++..|+...+..+.++
T Consensus 47 ~~~~~vvlDls~v~~i----------Dssgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~~~~~i~ 112 (130)
T 4dgh_A 47 ETPQILILRLKWVPFM----------DITGIQTLEEMIQSFHKRGIKVLISGAN--SR-VSQKLVKAGIVKLVGEQNVY 112 (130)
T ss_dssp SCCSEEEEECTTCCCC----------CHHHHHHHHHHHHHHHTTTCEEEEECCC--HH-HHHHHHHTTHHHHHCGGGEE
T ss_pred cCCCEEEEECCCCCcc----------cHHHHHHHHHHHHHHHHCCCEEEEEcCC--HH-HHHHHHHcCChhhcCccccc
Confidence 3567899999887542 1112234566778889999999877433 45 47888988876555323344
No 171
>4dgf_A Sulfate transporter sulfate transporter family PR; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.60A {Wolinella succinogenes} PDB: 3oir_A*
Probab=91.23 E-value=0.42 Score=28.17 Aligned_cols=60 Identities=10% Similarity=0.097 Sum_probs=39.8
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
...+.+++|+-++=.- ...-.....++.+.++++|..+.++.-+ +. +...++..|+...+
T Consensus 50 ~~~~~vvlDls~v~~i----------Dssgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~ 109 (135)
T 4dgf_A 50 ETPKVFILRMRRVPVI----------DATGMHALWEFQESCEKRGTILLLSGVS--DR-LYGALNRFGFIEAL 109 (135)
T ss_dssp SCCSEEEEECTTCSCB----------CHHHHHHHHHHHHHHHHHTCEEEEESCC--HH-HHHHHHHHTHHHHH
T ss_pred CCCcEEEEEcCCCCcc----------CHHHHHHHHHHHHHHHHCCCEEEEEcCC--HH-HHHHHHHcCChhhc
Confidence 4467788898776432 1112234566778889999999977433 44 37788888876555
No 172
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=91.19 E-value=1.3 Score=25.60 Aligned_cols=59 Identities=12% Similarity=0.057 Sum_probs=40.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..+.+++|+.++=.- ...-..-...+.+.++++|.++.++.-+ +. +...++..|+...|
T Consensus 51 ~~~~vvlDls~V~~i----------DSsGl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~ 109 (125)
T 2ka5_A 51 GYNKIFLVLSDVESI----------DSFSLGVIVNILKSISSSGGFFALVSPN--EK-VERVLSLTNLDRIV 109 (125)
T ss_dssp TCCEEEEECTTCSCC----------CHHHHHHHHHHHHHHHHHTCEEEEECCC--HH-HHHHHHHTTSTTTS
T ss_pred CCCEEEEECCCCCEE----------cHHHHHHHHHHHHHHHHcCCEEEEEeCC--HH-HHHHHHHcCCCceE
Confidence 467799999888442 1111223456778888999999887433 45 48889999998766
No 173
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=89.67 E-value=0.25 Score=36.44 Aligned_cols=17 Identities=35% Similarity=0.538 Sum_probs=14.8
Q ss_pred CCCceEEEeCCCCcccc
Q 034147 20 NLPRLVVFDLDYTLWPF 36 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~ 36 (103)
++++++-||||+||...
T Consensus 63 ~~I~~iGFDmDyTLa~Y 79 (555)
T 2jc9_A 63 EKIKCFGFDMDYTLAVY 79 (555)
T ss_dssp GGCCEEEECTBTTTBCB
T ss_pred cCCCEEEECCccccccc
Confidence 46899999999999963
No 174
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=89.51 E-value=1.2 Score=24.96 Aligned_cols=73 Identities=16% Similarity=0.254 Sum_probs=45.0
Q ss_pred HHhhHHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHH
Q 034147 5 EKVKNEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLH 84 (103)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~ 84 (103)
+..++...+.+... ..+.+++|+.|+=.- ......-...+.++++++|.++.++.-+ +. +...++
T Consensus 28 ~~l~~~l~~~~~~~--~~~~vvlDls~v~~i----------Dssgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~ 92 (116)
T 1th8_B 28 EELREQVTDVLENR--AIRHIVLNLGQLTFM----------DSSGLGVILGRYKQIKNVGGQMVVCAVS--PA-VKRLFD 92 (116)
T ss_dssp HHHHHHHHHHHHSS--CCCEEEEEEEEEEEE----------CHHHHHHHHHHHHHHHHTTCCEEEESCC--HH-HHHHHH
T ss_pred HHHHHHHHHHHhcC--CCcEEEEECCCCcEE----------ccHHHHHHHHHHHHHHHhCCeEEEEeCC--HH-HHHHHH
Confidence 34444444444321 256789999887432 1111123455678888999998876443 45 488899
Q ss_pred HcCCCCcc
Q 034147 85 KLGIHSMF 92 (103)
Q Consensus 85 ~~~l~~~~ 92 (103)
..|+...|
T Consensus 93 ~~gl~~~~ 100 (116)
T 1th8_B 93 MSGLFKII 100 (116)
T ss_dssp HHTGGGTS
T ss_pred HhCCceeE
Confidence 99987765
No 175
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=89.01 E-value=1.8 Score=23.87 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=38.6
Q ss_pred ceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 23 ~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+.+++|+-++=.- ...-..-...+.++++++|.++.++.-+ +. +...++..|+...|
T Consensus 45 ~~vvlDls~v~~i----------Dssgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~ 101 (110)
T 1sbo_A 45 KKIVLDLSSVSYM----------DSAGLGTLVVILKDAKINGKEFILSSLK--ES-ISRILKLTHLDKIF 101 (110)
T ss_dssp SEEEEECTTCCCB----------CHHHHHHHHHHHHHHHHTTCEEEEESCC--HH-HHHHHHHTTCGGGS
T ss_pred cEEEEECCCCcEE----------ccHHHHHHHHHHHHHHHcCCEEEEEeCC--HH-HHHHHHHhCcccee
Confidence 6689999887432 1111123455677788899998876433 45 48889999998776
No 176
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=88.82 E-value=1.5 Score=25.12 Aligned_cols=59 Identities=22% Similarity=0.160 Sum_probs=40.1
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH-CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~-~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..+.+++|+-++=+-. ..-..-...+.+++++ +|.++.++.-+ +. +...++..|+...|
T Consensus 47 ~~~~vvlDls~v~~iD----------SsGl~~L~~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~ 106 (121)
T 3t6o_A 47 QPRKVLIDLEGVEFFG----------SSFIELLVRGWKRIKEDQQGVFALCSVS--PY-CVEVLQVTHIDEVW 106 (121)
T ss_dssp SSCEEEEECTTCCEEC----------HHHHHHHHHHHHHHTTSTTCEEEEESCC--HH-HHHHHTTCSGGGGS
T ss_pred CCCeEEEECCCCCEEc----------HHHHHHHHHHHHHHHHhcCCEEEEEeCC--HH-HHHHHHHhCcccee
Confidence 4678999999975431 1111224456677888 89999877433 45 48889999988776
No 177
>3zxn_A RSBS, anti-sigma-factor antagonist (STAS) domain protei; transcription, gene regulation; 1.90A {Moorella thermoacetica} PDB: 2vy9_A 3ztb_A*
Probab=87.86 E-value=2.7 Score=24.40 Aligned_cols=71 Identities=15% Similarity=0.145 Sum_probs=46.7
Q ss_pred HHHhhHHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHH
Q 034147 4 LEKVKNEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFL 83 (103)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l 83 (103)
++.+++..++.+.. ...+.+++|+-|+=+-. ...........+.++..|.+++++.-+ +.+ ...+
T Consensus 27 a~~l~~~ll~~i~~--~~~~~vIlDlsgV~~iD----------s~g~~~L~~~~~~~~l~G~~~~l~Gi~--p~v-a~~l 91 (123)
T 3zxn_A 27 VIQFKEELLHNITG--VAGKGLVIDISALEVVD----------EFVTRVLIEISRLAELLGLPFVLTGIK--PAV-AITL 91 (123)
T ss_dssp HHHHHHHHHHHHTS--SCCSEEEEECTTCSSCC----------HHHHHHHHHHHHHHHHHTCCEEEECCC--HHH-HHHH
T ss_pred HHHHHHHHHHHHHh--cCCCEEEEEcCCCCccc----------HHHHHHHHHHHHHHHHCCCEEEEEcCC--HHH-HHHH
Confidence 45566666666653 34678999999985531 111133566778888899998766433 443 7778
Q ss_pred HHcCCC
Q 034147 84 HKLGIH 89 (103)
Q Consensus 84 ~~~~l~ 89 (103)
..+|+.
T Consensus 92 ~~~G~~ 97 (123)
T 3zxn_A 92 TEMGLD 97 (123)
T ss_dssp HHTTCC
T ss_pred HHhCCC
Confidence 889885
No 178
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=87.74 E-value=1.6 Score=24.69 Aligned_cols=56 Identities=9% Similarity=0.090 Sum_probs=37.9
Q ss_pred eEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 24 LVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 24 ~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.+++|+-++=.-. ..-..-...+.++++++|.++.++.-+ +. +...++..|+...|
T Consensus 44 ~vvlDls~v~~iD----------ssgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~gl~~~~ 99 (117)
T 4hyl_A 44 KMILDLREVSYMS----------SAGLRVLLSLYRHTSNQQGALVLVGVS--EE-IRDTMEITGFWNFF 99 (117)
T ss_dssp EEEEEEEEEEEEC----------HHHHHHHHHHHHHHHHTTCEEEEECCC--HH-HHHHHHHHTCGGGC
T ss_pred eEEEECCCCcEEc----------HHHHHHHHHHHHHHHHcCCEEEEEeCC--HH-HHHHHHHhCcccee
Confidence 6899998874321 111123455667888899998877433 45 48889999998776
No 179
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=87.34 E-value=0.63 Score=31.40 Aligned_cols=39 Identities=21% Similarity=0.227 Sum_probs=31.9
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCC
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l 88 (103)
.+.+++.++++.|++ |++++++|+..... +....+.+++
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~-~~~~~~~~~~ 141 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQY-LRRTASMIGV 141 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHH-HHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEE-Ecccchhhhh
Confidence 567999999999999 99999999887555 4666666665
No 180
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=86.34 E-value=5 Score=26.86 Aligned_cols=57 Identities=7% Similarity=0.068 Sum_probs=45.6
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.+.++.=+-|+.+.. +.+.+.+-+..|++.|+++++++|+. +.+ ...++++++...|
T Consensus 36 ~k~iVIKiGGs~l~~------------~~~~l~~dIa~L~~~G~~vVlVhgGg-~~i-~~~l~~lg~~~~~ 92 (279)
T 3l86_A 36 KDIIVIKIGGVASQQ------------LSGDFLSQIKNWQDAGKQLVIVHGGG-FAI-NKLMEENQVPVKK 92 (279)
T ss_dssp CCEEEEEECTTGGGS------------CCHHHHHHHHHHHHTTCEEEEEECCH-HHH-HHHHHHTTCCCCE
T ss_pred CceEEEEEChHHHHh------------HHHHHHHHHHHHHhCCCcEEEEECCH-HHH-HHHHHHcCCCCcc
Confidence 367899999998851 24667788888999999999999986 553 8889999987655
No 181
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=85.71 E-value=0.77 Score=29.71 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=23.5
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
..++|++.++++.|+ +|+++ ++||++.
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~ 155 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDA 155 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCS
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCc
Confidence 457899999999999 89998 8998875
No 182
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=85.35 E-value=3.9 Score=23.85 Aligned_cols=66 Identities=12% Similarity=0.027 Sum_probs=38.8
Q ss_pred HHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHc
Q 034147 9 NEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
.++++.+......++++++|++-.=. ...++++++++. ..+++++|+...... .......
T Consensus 71 ~~al~~l~~~~~~~dliilD~~l~~~-----------------~g~~~~~~lr~~~~~~~ii~ls~~~~~~~-~~~~~~~ 132 (157)
T 3hzh_A 71 EEAVIKYKNHYPNIDIVTLXITMPKM-----------------DGITCLSNIMEFDKNARVIMISALGKEQL-VKDCLIK 132 (157)
T ss_dssp HHHHHHHHHHGGGCCEEEECSSCSSS-----------------CHHHHHHHHHHHCTTCCEEEEESCCCHHH-HHHHHHT
T ss_pred HHHHHHHHhcCCCCCEEEEeccCCCc-----------------cHHHHHHHHHhhCCCCcEEEEeccCcHHH-HHHHHHc
Confidence 34444444432257888888752211 235667777653 488999998876653 4445566
Q ss_pred CCCCcc
Q 034147 87 GIHSMF 92 (103)
Q Consensus 87 ~l~~~~ 92 (103)
|...++
T Consensus 133 g~~~~l 138 (157)
T 3hzh_A 133 GAKTFI 138 (157)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 765544
No 183
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=85.19 E-value=1.4 Score=29.62 Aligned_cols=41 Identities=17% Similarity=0.185 Sum_probs=32.0
Q ss_pred cChhHHHHHHHHH-HC----------CCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 49 LYPHAKGILEALK-EK----------GIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 49 ~~~g~~~~l~~l~-~~----------G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+.+...+.+.++. +. |++++++||++... ....++.+|++.
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~-l~~~~~~~gld~ 95 (335)
T 3n28_A 44 LTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSE-HETILKALELDY 95 (335)
T ss_dssp CCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHH-HHHHHHHHTCEE
T ss_pred CCHHHHHHHHHHhcccccchheeecccceEEEecCCchHH-HHHHHHHcCCCE
Confidence 3455666676665 34 89999999999998 499999999876
No 184
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=84.80 E-value=0.028 Score=36.09 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=22.6
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCch
Q 034147 48 YLYPHAKGILEALKEKGIHVAVASRSPAP 76 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T~~~~~ 76 (103)
.+++++.++++.++ +|+++ ++|+.+..
T Consensus 122 ~~~~~~~~~l~~l~-~~~~~-i~t~~~~~ 148 (259)
T 2ho4_A 122 FHYQLLNQAFRLLL-DGAPL-IAIHKARY 148 (259)
T ss_dssp CBHHHHHHHHHHHH-TTCCE-EESCCCSE
T ss_pred CCHHHHHHHHHHHH-CCCEE-EEECCCCc
Confidence 36789999999999 89999 89987643
No 185
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=84.77 E-value=1.2 Score=25.97 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=33.9
Q ss_pred HHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchh
Q 034147 9 NEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPD 77 (103)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~ 77 (103)
+++++.+.. ..++++++|+. .+ -..| .+++++++++++|++++|+.....
T Consensus 43 ~eAl~~~~~--~~~DlvllDi~---mP-------------~~~G-~el~~~lr~~~ipvI~lTa~~~~~ 92 (123)
T 2lpm_A 43 QEALDIARK--GQFDIAIIDVN---LD-------------GEPS-YPVADILAERNVPFIFATGYGSKG 92 (123)
T ss_dssp HHHHHHHHH--CCSSEEEECSS---SS-------------SCCS-HHHHHHHHHTCCSSCCBCTTCTTS
T ss_pred HHHHHHHHh--CCCCEEEEecC---CC-------------CCCH-HHHHHHHHcCCCCEEEEecCccHH
Confidence 455666554 35788888872 11 1235 468889999999999999876443
No 186
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=83.44 E-value=4.4 Score=22.95 Aligned_cols=66 Identities=20% Similarity=0.205 Sum_probs=39.2
Q ss_pred HHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHc
Q 034147 9 NEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
.++++.+......++++++|++-. + ....++++++++. ..+++++|+...... ....-..
T Consensus 37 ~~a~~~~~~~~~~~dlvi~d~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~ 98 (143)
T 3jte_A 37 TEGLRIFTENCNSIDVVITDMKMP--K---------------LSGMDILREIKKITPHMAVIILTGHGDLDN-AILAMKE 98 (143)
T ss_dssp HHHHHHHHHTTTTCCEEEEESCCS--S---------------SCHHHHHHHHHHHCTTCEEEEEECTTCHHH-HHHHHHT
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCC--C---------------CcHHHHHHHHHHhCCCCeEEEEECCCCHHH-HHHHHHh
Confidence 344455543334688899887532 1 1235666666653 588999998876553 4444556
Q ss_pred CCCCcc
Q 034147 87 GIHSMF 92 (103)
Q Consensus 87 ~l~~~~ 92 (103)
|...++
T Consensus 99 g~~~~l 104 (143)
T 3jte_A 99 GAFEYL 104 (143)
T ss_dssp TCSEEE
T ss_pred CcceeE
Confidence 665544
No 187
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=83.28 E-value=1.1 Score=28.68 Aligned_cols=27 Identities=15% Similarity=0.162 Sum_probs=22.7
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
..++|++.++++.|+ +|+++ |+||++.
T Consensus 125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~ 151 (264)
T 1yv9_A 125 ELSYEKVVLATLAIQ-KGALF-IGTNPDK 151 (264)
T ss_dssp TCCHHHHHHHHHHHH-TTCEE-EESCCCS
T ss_pred CcCHHHHHHHHHHHh-CCCEE-EEECCCC
Confidence 457899999999997 88997 8888765
No 188
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=83.08 E-value=4.4 Score=22.65 Aligned_cols=72 Identities=10% Similarity=0.115 Sum_probs=43.5
Q ss_pred HhhHHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH
Q 034147 6 KVKNEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~ 85 (103)
..++...+.+.. ...+.+++|+.++=.- ...-..-...+.++++++|.++.++.-+ +. +...++.
T Consensus 28 ~l~~~l~~~~~~--~~~~~vvlDls~v~~i----------Dssgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~ 92 (117)
T 1h4x_A 28 QIRAKISTAIFQ--GAVTTIIWNFERLSFM----------DSSGVGLVLGRMRELEAVAGRTILLNPS--PT-MRKVFQF 92 (117)
T ss_dssp HHHHHHHHHHHH--TSCSEEEEEEEEEEEE----------CTHHHHHHHHHHHHHHTTTCEEEEESCC--HH-HHHHHHH
T ss_pred HHHHHHHHHHhc--CCCCEEEEECCCCcEe----------chHHHHHHHHHHHHHHHcCCEEEEEeCC--HH-HHHHHHH
Confidence 344444444421 1356689999887432 0111123455667788899998876433 45 4888999
Q ss_pred cCCCCcc
Q 034147 86 LGIHSMF 92 (103)
Q Consensus 86 ~~l~~~~ 92 (103)
.++...|
T Consensus 93 ~gl~~~~ 99 (117)
T 1h4x_A 93 SGLGPWM 99 (117)
T ss_dssp TTCGGGE
T ss_pred hCCceEE
Confidence 9987654
No 189
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=82.78 E-value=0.27 Score=32.30 Aligned_cols=44 Identities=9% Similarity=0.175 Sum_probs=34.7
Q ss_pred ccChhHHHHHHHHHHC-CCeEEEEeCC---------------------CchhHHHHHHHHcCCCCcc
Q 034147 48 YLYPHAKGILEALKEK-GIHVAVASRS---------------------PAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~-G~~v~i~T~~---------------------~~~~i~~~~l~~~~l~~~~ 92 (103)
.+++++.++++.++++ |+++++.|+. .... +...++++++..++
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~~~~ 187 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLA-IEKICEEYGVSVNI 187 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHH-HHHHHHHHTEEEEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHH-HHHHHHHcCCCEEE
Confidence 4568999999999988 9999999977 4455 47778888876555
No 190
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=82.27 E-value=4.4 Score=25.08 Aligned_cols=64 Identities=9% Similarity=0.122 Sum_probs=45.3
Q ss_pred HHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCC-eEEEEeCCCchhHHHHHHHHcC
Q 034147 9 NEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~-~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
++...++....+.-.+|++|..|--+++ ++..+.|+.+...|. .++++=|++... ...+.++.+
T Consensus 62 ~Eg~~il~~i~~~~~vI~LD~~Gk~~sS--------------~~fA~~l~~~~~~g~~~i~FvIGG~~Gl-~~~v~~rA~ 126 (163)
T 4fak_A 62 KEGQRILAKIKPQSTVITLEIQGKMLSS--------------EGLAQELNQRMTQGQSDFVFVIGGSNGL-HKDVLQRSN 126 (163)
T ss_dssp HHHHHHHHTCCTTSEEEEEEEEEEECCH--------------HHHHHHHHHHHHTTCCEEEEEECBTTBC-CHHHHHHCS
T ss_pred HHHHHHHHhCCCCCEEEEEcCCCCcCCH--------------HHHHHHHHHHHhcCCcceEEEEECCCcc-CHHHHHhcC
Confidence 3444566665566678999999998863 567888888888885 688888877554 455555543
No 191
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=81.73 E-value=2.8 Score=25.95 Aligned_cols=29 Identities=7% Similarity=0.126 Sum_probs=25.0
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+.+.++++.++++|.+++.+|+.+...+
T Consensus 126 t~~~i~~~~~ak~~g~~vI~IT~~~~s~L 154 (199)
T 1x92_A 126 SANVIQAIQAAHDREMLVVALTGRDGGGM 154 (199)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECTTCHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCCCcH
Confidence 36789999999999999999999876554
No 192
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=80.50 E-value=5.7 Score=26.29 Aligned_cols=69 Identities=22% Similarity=0.243 Sum_probs=47.4
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+++-.++... .+.++.=+-|+.+.. ......+.+-+..+++.|++++|++|+. +. +...++.+++.
T Consensus 11 ~~~pyi~~~~--~~~iViKlGGs~l~~----------~~~~~~~~~~i~~l~~~G~~vVlVhGgG-~~-i~~~~~~~~~~ 76 (282)
T 2bty_A 11 EALPYIKEFY--GKTFVIKFGGSAMKQ----------ENAKKAFIQDIILLKYTGIKPIIVHGGG-PA-ISQMMKDLGIE 76 (282)
T ss_dssp HHHHHHHHHT--TCEEEEEECSHHHHS----------HHHHHHHHHHHHHHHHTTCEEEEEECCS-HH-HHHHHHHHTCC
T ss_pred HHHHHHHHhc--CCeEEEEECchhhCC----------hhHHHHHHHHHHHHHHCCCcEEEEECCc-HH-HHHHHHHcCCC
Confidence 3444555544 356888999998851 1123456667778888899999999976 55 48888888876
Q ss_pred Ccc
Q 034147 90 SMF 92 (103)
Q Consensus 90 ~~~ 92 (103)
..|
T Consensus 77 ~~~ 79 (282)
T 2bty_A 77 PVF 79 (282)
T ss_dssp CCB
T ss_pred ccc
Confidence 533
No 193
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=79.74 E-value=2.9 Score=25.71 Aligned_cols=28 Identities=14% Similarity=0.253 Sum_probs=24.1
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++|.+++.+|+++...+
T Consensus 130 ~~~~~~~~~ak~~g~~vI~IT~~~~s~L 157 (198)
T 2xbl_A 130 PNILAAFREAKAKGMTCVGFTGNRGGEM 157 (198)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCCTH
T ss_pred HHHHHHHHHHHHCCCeEEEEECCCCCcH
Confidence 6789999999999999999998775553
No 194
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=79.68 E-value=3 Score=25.48 Aligned_cols=28 Identities=14% Similarity=0.182 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++|.+++.+|+.....+
T Consensus 101 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l 128 (187)
T 3sho_A 101 RDTVAALAGAAERGVPTMALTDSSVSPP 128 (187)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCcc
Confidence 6789999999999999999998876554
No 195
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=79.35 E-value=2.8 Score=25.51 Aligned_cols=29 Identities=10% Similarity=0.249 Sum_probs=24.8
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+.+.++++.++++|.+++.+|+.....+
T Consensus 109 t~~~~~~~~~ak~~g~~vi~IT~~~~s~l 137 (183)
T 2xhz_A 109 SSEITALIPVLKRLHVPLICITGRPESSM 137 (183)
T ss_dssp CHHHHHHHHHHHTTTCCEEEEESCTTSHH
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCChh
Confidence 36789999999999999999998876554
No 196
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=79.03 E-value=3.7 Score=25.06 Aligned_cols=28 Identities=18% Similarity=0.020 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++|.+++.+|+.....+
T Consensus 93 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l 120 (186)
T 1m3s_A 93 KSLIHTAAKAKSLHGIVAALTINPESSI 120 (186)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCch
Confidence 6788999999999999999999875553
No 197
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=78.52 E-value=7.3 Score=22.33 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=35.2
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH----CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~----~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..++++++|++-- + ..-.++++++++ .+.+++++|+...... .......|...++
T Consensus 58 ~~~dliilD~~l~--~---------------~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~-~~~~~~~g~~~~l 116 (152)
T 3heb_A 58 GRAQLVLLDLNLP--D---------------MTGIDILKLVKENPHTRRSPVVILTTTDDQRE-IQRCYDLGANVYI 116 (152)
T ss_dssp TCBEEEEECSBCS--S---------------SBHHHHHHHHHHSTTTTTSCEEEEESCCCHHH-HHHHHHTTCSEEE
T ss_pred CCCCEEEEeCCCC--C---------------CcHHHHHHHHHhcccccCCCEEEEecCCCHHH-HHHHHHCCCcEEE
Confidence 4578888887421 1 123677888877 4578999998886653 4445566765543
No 198
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=78.25 E-value=7.2 Score=22.09 Aligned_cols=63 Identities=14% Similarity=0.214 Sum_probs=38.7
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH----CCCeEEEEeCCCchhHHHHHHHH
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~----~G~~v~i~T~~~~~~i~~~~l~~ 85 (103)
++++.+.. ..++++++|++-. + ....++++++++ .+.+++++|+...... ....-.
T Consensus 42 ~a~~~l~~--~~~dlii~D~~l~--~---------------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~-~~~~~~ 101 (144)
T 3kht_A 42 KALYQVQQ--AKYDLIILDIGLP--I---------------ANGFEVMSAVRKPGANQHTPIVILTDNVSDDR-AKQCMA 101 (144)
T ss_dssp HHHHHHTT--CCCSEEEECTTCG--G---------------GCHHHHHHHHHSSSTTTTCCEEEEETTCCHHH-HHHHHH
T ss_pred HHHHHhhc--CCCCEEEEeCCCC--C---------------CCHHHHHHHHHhcccccCCCEEEEeCCCCHHH-HHHHHH
Confidence 34444433 3478888887522 1 124678888876 4588999998876553 444455
Q ss_pred cCCCCcc
Q 034147 86 LGIHSMF 92 (103)
Q Consensus 86 ~~l~~~~ 92 (103)
.|...++
T Consensus 102 ~ga~~~l 108 (144)
T 3kht_A 102 AGASSVV 108 (144)
T ss_dssp TTCSEEE
T ss_pred cCCCEEE
Confidence 6765544
No 199
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=77.81 E-value=6.9 Score=26.16 Aligned_cols=68 Identities=25% Similarity=0.301 Sum_probs=46.2
Q ss_pred HHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 11 ALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 11 ~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
++-.++... .+.++.=+-|+.+.. ......+.+-+..+++.|++++|++|+. +. +...++.+++..
T Consensus 16 a~pyi~~~~--~k~iViKlGGs~l~~----------~~~~~~~~~~i~~l~~~G~~vViVhGgG-~~-i~~~~~~~~~~~ 81 (299)
T 2ap9_A 16 ALPWLKQLH--GKVVVVKYGGNAMTD----------DTLRRAFAADMAFLRNCGIHPVVVHGGG-PQ-ITAMLRRLGIEG 81 (299)
T ss_dssp HHHHHHHHT--TCEEEEEECTHHHHS----------HHHHHHHHHHHHHHHTTTCEEEEEECCS-HH-HHHHHHHHTCCC
T ss_pred HHHHHHHhC--CCeEEEEECchhhCC----------chHHHHHHHHHHHHHHCCCcEEEEECCc-HH-HHHHHHHcCCcc
Confidence 344444432 356888999998851 1122356677778888899999999976 55 488888888765
Q ss_pred cc
Q 034147 91 MF 92 (103)
Q Consensus 91 ~~ 92 (103)
.|
T Consensus 82 ~~ 83 (299)
T 2ap9_A 82 DF 83 (299)
T ss_dssp CC
T ss_pred cc
Confidence 33
No 200
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=77.81 E-value=3.3 Score=25.86 Aligned_cols=29 Identities=10% Similarity=0.148 Sum_probs=24.8
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+.+.++++.++++|.+++.+|+.....+
T Consensus 102 t~~~i~~~~~ak~~g~~vI~IT~~~~s~L 130 (200)
T 1vim_A 102 TTSVVNISKKAKDIGSKLVAVTGKRDSSL 130 (200)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEESCTTSHH
T ss_pred cHHHHHHHHHHHHCCCeEEEEECCCCChH
Confidence 36789999999999999999999876553
No 201
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=77.69 E-value=11 Score=25.25 Aligned_cols=68 Identities=24% Similarity=0.243 Sum_probs=46.5
Q ss_pred HHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 11 ALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 11 ~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
++-.++... .+.++.=+-|..+.. ......+.+-+..|++.|++++|++|+. +. +...++++++..
T Consensus 17 a~pyi~~~~--~k~iVIKlGGs~l~~----------~~~~~~~~~~i~~l~~~G~~vVlVhGgG-~~-i~~~~~~~g~~~ 82 (300)
T 2buf_A 17 ALPYIRRFV--GKTLVIKYGGNAMES----------EELKAGFARDVVLMKAVGINPVVVHGGG-PQ-IGDLLKRLSIES 82 (300)
T ss_dssp HHHHHHHHT--TCEEEEEECCTTTTS----------SHHHHHHHHHHHHHHHTTCEEEEEECCC-HH-HHHHHHHTTCCC
T ss_pred HhHHHHHhc--CCeEEEEECchhhCC----------chHHHHHHHHHHHHHHCCCeEEEEECCc-HH-HHHHHHHcCCCc
Confidence 344444432 356888888988751 1123446666778888999999999986 55 478899999875
Q ss_pred cc
Q 034147 91 MF 92 (103)
Q Consensus 91 ~~ 92 (103)
-|
T Consensus 83 ~~ 84 (300)
T 2buf_A 83 HF 84 (300)
T ss_dssp CB
T ss_pred cc
Confidence 44
No 202
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=77.45 E-value=3.6 Score=25.33 Aligned_cols=28 Identities=7% Similarity=0.057 Sum_probs=24.3
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchh
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPD 77 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~ 77 (103)
.+.+.++++.++++|.+++.+|+.....
T Consensus 122 t~~~i~~~~~ak~~g~~vI~IT~~~~s~ 149 (196)
T 2yva_A 122 SRDIVKAVEAAVTRDMTIVALTGYDGGE 149 (196)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECTTCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCCch
Confidence 3678999999999999999999987555
No 203
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=77.31 E-value=3.8 Score=24.92 Aligned_cols=29 Identities=38% Similarity=0.480 Sum_probs=24.1
Q ss_pred cccChhH-HHHHHHHHHCCCeEEEEeCCCc
Q 034147 47 PYLYPHA-KGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 47 ~~~~~g~-~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
+.+.+.. .++++.+++.|+++.+.||+..
T Consensus 14 Pll~~~~~~~l~~~~~~~g~~~~l~TNG~l 43 (182)
T 3can_A 14 PLLHPEFLIDILKRCGQQGIHRAVDTTLLA 43 (182)
T ss_dssp GGGSHHHHHHHHHHHHHTTCCEEEECTTCC
T ss_pred ccCCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence 4456776 6999999999999999998873
No 204
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=76.98 E-value=1.9 Score=28.53 Aligned_cols=28 Identities=11% Similarity=0.233 Sum_probs=24.0
Q ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCc
Q 034147 47 PYLYPHAKGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 47 ~~~~~g~~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
..++|++.++++.|+++|+ ++++||.+.
T Consensus 155 ~~~~~~~~~~l~~l~~~g~-~~i~tn~~~ 182 (306)
T 2oyc_A 155 HFSFAKLREACAHLRDPEC-LLVATDRDP 182 (306)
T ss_dssp TCCHHHHHHHHHHHTSTTS-EEEESCCCC
T ss_pred CCCHHHHHHHHHHHHcCCC-EEEEEcCCc
Confidence 4567999999999999998 889998774
No 205
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=76.97 E-value=7.8 Score=21.82 Aligned_cols=62 Identities=21% Similarity=0.234 Sum_probs=37.5
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcC
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
++++.+.. ..++++++|+ +-+ ....++++.+++. +.+++++|+...... .......|
T Consensus 39 ~a~~~l~~--~~~dlvi~d~---~~~---------------~~g~~~~~~l~~~~~~~pii~ls~~~~~~~-~~~~~~~g 97 (142)
T 2qxy_A 39 EAFTFLRR--EKIDLVFVDV---FEG---------------EESLNLIRRIREEFPDTKVAVLSAYVDKDL-IINSVKAG 97 (142)
T ss_dssp HHHHHHTT--SCCSEEEEEC---TTT---------------HHHHHHHHHHHHHCTTCEEEEEESCCCHHH-HHHHHHHT
T ss_pred HHHHHHhc--cCCCEEEEeC---CCC---------------CcHHHHHHHHHHHCCCCCEEEEECCCCHHH-HHHHHHCC
Confidence 34444443 3478888887 221 1235677777654 589999998876553 44455667
Q ss_pred CCCcc
Q 034147 88 IHSMF 92 (103)
Q Consensus 88 l~~~~ 92 (103)
...++
T Consensus 98 ~~~~l 102 (142)
T 2qxy_A 98 AVDYI 102 (142)
T ss_dssp CSCEE
T ss_pred cceeE
Confidence 66554
No 206
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=76.85 E-value=2.6 Score=25.72 Aligned_cols=28 Identities=18% Similarity=0.084 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++|.+++.+|+++...+
T Consensus 124 ~~~~~~~~~ak~~g~~vi~iT~~~~s~L 151 (188)
T 1tk9_A 124 PNVLEALKKAKELNMLCLGLSGKGGGMM 151 (188)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEGGGTTH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCcch
Confidence 6789999999999999999998765553
No 207
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=75.74 E-value=8.5 Score=21.64 Aligned_cols=39 Identities=18% Similarity=0.324 Sum_probs=26.2
Q ss_pred HHHHHHHHHH----CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 53 AKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 53 ~~~~l~~l~~----~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
-.++++++++ .+.+++++|+...... ....-..|...++
T Consensus 66 g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l 108 (140)
T 3lua_A 66 GLEVLSAIRNNSRTANTPVIIATKSDNPGY-RHAALKFKVSDYI 108 (140)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEESCCCHHH-HHHHHHSCCSEEE
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCHHH-HHHHHHcCCCEEE
Confidence 3567777776 4689999998876553 4445566765544
No 208
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=75.74 E-value=6.1 Score=26.42 Aligned_cols=67 Identities=21% Similarity=0.273 Sum_probs=46.0
Q ss_pred HHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 11 ALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 11 ~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
++-.++... .+.++.-+-|..+.. ......+.+-+..+++.|++++|++|+. +. +...++.+++..
T Consensus 27 a~pyi~~~~--~k~iVIKlGGs~l~~----------~~~~~~~~~~i~~l~~~G~~vViVhGgG-~~-i~~~~~~~~~~~ 92 (298)
T 2rd5_A 27 SLPFIQKFR--GKTIVVKYGGAAMTS----------PELKSSVVSDLVLLACVGLRPILVHGGG-PD-INRYLKQLNIPA 92 (298)
T ss_dssp THHHHHHTT--TCEEEEEECTHHHHC----------HHHHHHHHHHHHHHHHTTCEEEEEECCH-HH-HHHHHHHTTCCC
T ss_pred HHHHHHHhc--CCEEEEEECchhhCC----------hhHHHHHHHHHHHHHHCCCCEEEEECCc-HH-HHHHHHHcCCCc
Confidence 344555443 456888999998751 1122446667777888999999999966 55 488889988765
Q ss_pred c
Q 034147 91 M 91 (103)
Q Consensus 91 ~ 91 (103)
-
T Consensus 93 ~ 93 (298)
T 2rd5_A 93 E 93 (298)
T ss_dssp C
T ss_pred c
Confidence 3
No 209
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=75.51 E-value=8.3 Score=21.39 Aligned_cols=55 Identities=22% Similarity=0.277 Sum_probs=34.3
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..++++++|++-- + .. -.++++++++. +.+++++|+...... ....-..|...++
T Consensus 54 ~~~dlvi~d~~~~--~--------------~~-g~~~~~~l~~~~~~~~~pii~ls~~~~~~~-~~~~~~~g~~~~l 112 (140)
T 1k68_A 54 SRPDLILLXLNLP--K--------------KD-GREVLAEIKSDPTLKRIPVVVLSTSINEDD-IFHSYDLHVNCYI 112 (140)
T ss_dssp CCCSEEEECSSCS--S--------------SC-HHHHHHHHHHSTTGGGSCEEEEESCCCHHH-HHHHHHTTCSEEE
T ss_pred CCCcEEEEecCCC--c--------------cc-HHHHHHHHHcCcccccccEEEEecCCcHHH-HHHHHHhchhhee
Confidence 3578888887521 1 12 35778888773 578999998876552 3344456665544
No 210
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=74.89 E-value=12 Score=23.01 Aligned_cols=54 Identities=6% Similarity=0.060 Sum_probs=32.9
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH------CCCeEEEEeCCC-chhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE------KGIHVAVASRSP-APDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~------~G~~v~i~T~~~-~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++|+.=- + .. -.++++++++ ...+++++|+.. .... .......|...|+
T Consensus 119 ~~dlillD~~lp--~--------------~~-G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~-~~~~~~~Ga~~~l 179 (206)
T 3mm4_A 119 PFDYIFMDCQMP--E--------------MD-GYEATREIRKVEKSYGVRTPIIAVSGHDPGSEE-ARETIQAGMDAFL 179 (206)
T ss_dssp SCSEEEEESCCS--S--------------SC-HHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHH-HHHHHHHTCSEEE
T ss_pred CCCEEEEcCCCC--C--------------CC-HHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHH-HHHHHhCCCCEEE
Confidence 578899887421 0 12 3566777765 468999999876 4332 3334456665544
No 211
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=74.43 E-value=5.2 Score=25.88 Aligned_cols=39 Identities=15% Similarity=0.288 Sum_probs=27.7
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCccc
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFV 93 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~ 93 (103)
.++++++++.+.+++++|+..... .....-+.|..+|+.
T Consensus 64 ~~~~~~lr~~~~pvi~lt~~~~~~-~~~~a~~~Ga~dyl~ 102 (259)
T 3luf_A 64 GEAVKVLLERGLPVVILTADISED-KREAWLEAGVLDYVM 102 (259)
T ss_dssp SHHHHHHHHTTCCEEEEECC-CHH-HHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCCEEEEEccCCHH-HHHHHHHCCCcEEEe
Confidence 467788888889999999888666 354555677766653
No 212
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=74.40 E-value=11 Score=23.39 Aligned_cols=62 Identities=10% Similarity=0.139 Sum_probs=41.6
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCC-CeEEEEeCCCchhHHHHHHHHc
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKG-IHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G-~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
+...++....+...+|++|..|..+++ +...+.|+.+...| -.++++=|++... ...+.++.
T Consensus 59 E~~~il~~i~~~~~vI~LD~~Gk~~sS--------------~~fA~~l~~~~~~G~~~i~FvIGGa~Gl-~~~v~~rA 121 (167)
T 1to0_A 59 EGDRILSKISPDAHVIALAIEGKMKTS--------------EELADTIDKLATYGKSKVTFVIGGSLGL-SDTVMKRA 121 (167)
T ss_dssp HHHHHHTTSCTTSEEEEEEEEEEECCH--------------HHHHHHHHHHHTTTCCEEEEEECCSSCC-CHHHHHHC
T ss_pred HHHHHHhhcCCCCEEEEEcCCCCcCCH--------------HHHHHHHHHHHhcCCceEEEEEECCCCC-CHHHHHhh
Confidence 444455554444448999999998863 56788888888787 5677777777554 45555554
No 213
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=73.97 E-value=9.8 Score=21.52 Aligned_cols=54 Identities=17% Similarity=0.303 Sum_probs=34.8
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH----CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~----~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++|++-. + .. ..++++.+++ .+.+++++|+...... ....-..|..+++
T Consensus 52 ~~dlii~d~~l~--~--------------~~-g~~~~~~l~~~~~~~~~pii~ls~~~~~~~-~~~~~~~g~~~~l 109 (147)
T 2zay_A 52 HPHLIITEANMP--K--------------IS-GMDLFNSLKKNPQTASIPVIALSGRATAKE-EAQLLDMGFIDFI 109 (147)
T ss_dssp CCSEEEEESCCS--S--------------SC-HHHHHHHHHTSTTTTTSCEEEEESSCCHHH-HHHHHHHTCSEEE
T ss_pred CCCEEEEcCCCC--C--------------CC-HHHHHHHHHcCcccCCCCEEEEeCCCCHHH-HHHHHhCCCCEEE
Confidence 478888887532 1 12 3577888876 4688999998876553 4444556766554
No 214
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=73.77 E-value=9.7 Score=21.37 Aligned_cols=55 Identities=13% Similarity=0.202 Sum_probs=34.1
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH------CCCeEEEEeCCCchhHHHHHHHHcC-CCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE------KGIHVAVASRSPAPDIAKTFLHKLG-IHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~------~G~~v~i~T~~~~~~i~~~~l~~~~-l~~~~ 92 (103)
..++++++|++-- + ..-.++++++++ ...+++++|+...... .......| ...++
T Consensus 59 ~~~dlvi~D~~l~--~---------------~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~-~~~~~~~g~~~~~l 120 (146)
T 3ilh_A 59 RWPSIICIDINMP--G---------------INGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRD-QAKAEASDWVDYYV 120 (146)
T ss_dssp CCCSEEEEESSCS--S---------------SCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHH-HHHHHHCSSCCEEE
T ss_pred CCCCEEEEcCCCC--C---------------CCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHH-HHHHHhcCCcceee
Confidence 4578889887522 1 123567777766 4688999998876553 44445555 55443
No 215
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=73.46 E-value=7.6 Score=22.78 Aligned_cols=38 Identities=11% Similarity=0.213 Sum_probs=27.2
Q ss_pred HHHHHHHHH----CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~----~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ..+|++++|+..... ......+.|..+|.
T Consensus 73 ~el~~~ir~~~~~~~ipvI~lTa~~~~~-~~~~~~~~Ga~~yl 114 (134)
T 3to5_A 73 IDLLKNIRADEELKHLPVLMITAEAKRE-QIIEAAQAGVNGYI 114 (134)
T ss_dssp HHHHHHHHHSTTTTTCCEEEEESSCCHH-HHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCCCCCCeEEEEECCCCHH-HHHHHHHCCCCEEE
Confidence 577888875 358899999888666 35555667877665
No 216
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=73.17 E-value=3.7 Score=24.88 Aligned_cols=26 Identities=4% Similarity=-0.079 Sum_probs=22.9
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCch
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAP 76 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~ 76 (103)
+.+.++++.++++|.+++.+|+....
T Consensus 96 ~~~~~~~~~ak~~g~~vi~IT~~~~s 121 (180)
T 1jeo_A 96 ESVLTVAKKAKNINNNIIAIVCECGN 121 (180)
T ss_dssp HHHHHHHHHHHTTCSCEEEEESSCCG
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCh
Confidence 67899999999999999999987654
No 217
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=72.97 E-value=3.6 Score=26.69 Aligned_cols=26 Identities=12% Similarity=0.206 Sum_probs=20.4
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchh
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPD 77 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~ 77 (103)
+...++++.|+++|++ +|+||++...
T Consensus 148 ~~~~~l~~~L~~~g~~-~i~tn~~~~~ 173 (284)
T 2hx1_A 148 HDLNKTVNLLRKRTIP-AIVANTDNTY 173 (284)
T ss_dssp HHHHHHHHHHHHCCCC-EEEECCCSEE
T ss_pred ccHHHHHHHHhcCCCe-EEEECCCccc
Confidence 3566677789999999 9999987543
No 218
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=72.62 E-value=7.3 Score=26.49 Aligned_cols=67 Identities=22% Similarity=0.259 Sum_probs=45.7
Q ss_pred HHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCc
Q 034147 12 LEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (103)
Q Consensus 12 ~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~ 91 (103)
+-.++... .+.++.-+-|..+.. ......+.+-+..|++.|++++|++|+. +. +...++++++...
T Consensus 41 ~pyi~~~~--~k~iVIKlGGs~l~~----------~~~~~~l~~~i~~l~~~G~~vVlVhGgG-~~-i~~~~~~~g~~~~ 106 (321)
T 2v5h_A 41 LPYLQQFA--GRTVVVKYGGAAMKQ----------EELKEAVMRDIVFLACVGMRPVVVHGGG-PE-INAWLGRVGIEPQ 106 (321)
T ss_dssp HHHHHHTT--TCEEEEEECTHHHHS----------HHHHHHHHHHHHHHHHTTCEEEEEECCH-HH-HHHHHHHTTCCCC
T ss_pred HHHHHHhC--CCeEEEEECchhhCC----------chHHHHHHHHHHHHHHCCCEEEEEECCH-HH-HHHHHHHcCCCcc
Confidence 33444432 356888899988751 1122345666677888999999999986 55 4888899988754
Q ss_pred c
Q 034147 92 F 92 (103)
Q Consensus 92 ~ 92 (103)
|
T Consensus 107 ~ 107 (321)
T 2v5h_A 107 F 107 (321)
T ss_dssp B
T ss_pred c
Confidence 4
No 219
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=72.57 E-value=10 Score=21.01 Aligned_cols=40 Identities=13% Similarity=0.184 Sum_probs=26.2
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC----CCeEEEEeCCCchh
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPD 77 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----G~~v~i~T~~~~~~ 77 (103)
.++++++|++-. + ..-.++++++++. +.+++++|+.....
T Consensus 47 ~~dlvi~d~~l~--~---------------~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~ 90 (133)
T 3nhm_A 47 PPDVLISDVNMD--G---------------MDGYALCGHFRSEPTLKHIPVIFVSGYAPRT 90 (133)
T ss_dssp CCSEEEECSSCS--S---------------SCHHHHHHHHHHSTTTTTCCEEEEESCCC--
T ss_pred CCCEEEEeCCCC--C---------------CCHHHHHHHHHhCCccCCCCEEEEeCCCcHh
Confidence 477888887421 1 1246788888875 68899999877544
No 220
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=71.65 E-value=11 Score=21.05 Aligned_cols=54 Identities=22% Similarity=0.259 Sum_probs=34.2
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH----CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~----~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++|++-- + ....++++++++ .+.+++++|+...... ....-..|...++
T Consensus 54 ~~dlii~d~~l~--~---------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 111 (143)
T 3cnb_A 54 KPDVVMLDLMMV--G---------------MDGFSICHRIKSTPATANIIVIAMTGALTDDN-VSRIVALGAETCF 111 (143)
T ss_dssp CCSEEEEETTCT--T---------------SCHHHHHHHHHTSTTTTTSEEEEEESSCCHHH-HHHHHHTTCSEEE
T ss_pred CCCEEEEecccC--C---------------CcHHHHHHHHHhCccccCCcEEEEeCCCCHHH-HHHHHhcCCcEEE
Confidence 478888887432 1 123577888876 4588999998876552 4444566765544
No 221
>2eel_A Cell death activator CIDE-A; CIDE-N domain, cell death- inducing DFFA-like effector A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.55 E-value=5 Score=22.46 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=22.5
Q ss_pred cHHHhhHHHHHHhhccCCCCceEEEeCCCCcccc
Q 034147 3 DLEKVKNEALEIIGQFENLPRLVVFDLDYTLWPF 36 (103)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~fD~DGTL~~~ 36 (103)
.++.+.+.+.+.++.... .-.++++-|||.++.
T Consensus 29 sL~EL~~K~~~~l~l~~~-~~~lvLeeDGT~Vdd 61 (91)
T 2eel_A 29 SLQELISKTLDALVIATG-LVTLVLEEDGTVVDT 61 (91)
T ss_dssp SHHHHHHHHHHHTTCSSS-CEEEEETTTCCBCCC
T ss_pred CHHHHHHHHHHHhcCCCC-CcEEEEeeCCcEEec
Confidence 356666666666666432 445888999999973
No 222
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=71.40 E-value=4.2 Score=25.53 Aligned_cols=29 Identities=7% Similarity=0.087 Sum_probs=24.4
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+.+.++++.++++|.+++.+|+.+...+
T Consensus 127 t~~~~~~~~~ak~~g~~vi~iT~~~~s~l 155 (201)
T 3trj_A 127 SENILSAVEEAHDLEMKVIALTGGSGGAL 155 (201)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETTCCGG
T ss_pred CHHHHHHHHHHHHCCCcEEEEECCCCCHH
Confidence 36789999999999999999998765553
No 223
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=71.29 E-value=12 Score=21.50 Aligned_cols=64 Identities=17% Similarity=0.182 Sum_probs=38.6
Q ss_pred HHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC----CCeEEEEeCCCchhHHHHHHH
Q 034147 9 NEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLH 84 (103)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~ 84 (103)
.++++.+.. ..++++++|++-- + ..-.++++.+++. ..+++++|+...... ....-
T Consensus 41 ~~al~~l~~--~~~dlii~D~~l~--~---------------~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~-~~~~~ 100 (154)
T 3gt7_A 41 REAVRFLSL--TRPDLIISDVLMP--E---------------MDGYALCRWLKGQPDLRTIPVILLTILSDPRD-VVRSL 100 (154)
T ss_dssp HHHHHHHTT--CCCSEEEEESCCS--S---------------SCHHHHHHHHHHSTTTTTSCEEEEECCCSHHH-HHHHH
T ss_pred HHHHHHHHh--CCCCEEEEeCCCC--C---------------CCHHHHHHHHHhCCCcCCCCEEEEECCCChHH-HHHHH
Confidence 344454443 3478888887521 1 1235777788763 578999998776553 44445
Q ss_pred HcCCCCcc
Q 034147 85 KLGIHSMF 92 (103)
Q Consensus 85 ~~~l~~~~ 92 (103)
..|..+++
T Consensus 101 ~~g~~~~l 108 (154)
T 3gt7_A 101 ECGADDFI 108 (154)
T ss_dssp HHCCSEEE
T ss_pred HCCCCEEE
Confidence 56765544
No 224
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=71.29 E-value=3.2 Score=26.13 Aligned_cols=27 Identities=19% Similarity=0.267 Sum_probs=23.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchh
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPD 77 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~ 77 (103)
+.+.++++.++++|.+++.+|+.+...
T Consensus 145 ~~~i~~~~~ak~~G~~vIaIT~~~~s~ 171 (212)
T 2i2w_A 145 ANVIKAIAAAREKGMKVITLTGKDGGK 171 (212)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEETTCGG
T ss_pred HHHHHHHHHHHHCCCeEEEEECCCCCc
Confidence 678999999999999999999876444
No 225
>1f2r_I Inhibitor of caspase-activated DNAse; alpha-beta roll, protein-protein complex, DNA binding protein; NMR {Mus musculus} SCOP: d.15.2.1
Probab=71.24 E-value=12 Score=21.29 Aligned_cols=35 Identities=23% Similarity=0.233 Sum_probs=23.6
Q ss_pred cHHHhhHHHHHHhhccCC-CCceEEEeCCCCccccc
Q 034147 3 DLEKVKNEALEIIGQFEN-LPRLVVFDLDYTLWPFY 37 (103)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~fD~DGTL~~~~ 37 (103)
.++.+.+.+.+.++.... ..-.++++-|||.++.+
T Consensus 38 SL~EL~~K~~~~l~l~~~~~~~~lvLeeDGT~VddE 73 (100)
T 1f2r_I 38 SLEELRSKACELLAIDKSLTPITLVLAEDGTIVDDD 73 (100)
T ss_dssp SHHHHHHHHHHHHCCCGGGCSCEEEESSSCCBCCSS
T ss_pred CHHHHHHHHHHHhccCCCCCceEEEEeeCCcEEech
Confidence 356667667777666543 23457889999999743
No 226
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=71.14 E-value=11 Score=20.78 Aligned_cols=63 Identities=24% Similarity=0.307 Sum_probs=38.8
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHH
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~ 85 (103)
++++.+.. ..++++++|+.=- + .+| .++++++++. +.+++++|+...... ....-+
T Consensus 37 ~al~~l~~--~~~dlvllD~~~p--~--------------~~g-~~~~~~l~~~~~~~~~pii~~s~~~~~~~-~~~~~~ 96 (122)
T 3gl9_A 37 IALEKLSE--FTPDLIVLXIMMP--V--------------MDG-FTVLKKLQEKEEWKRIPVIVLTAKGGEED-ESLALS 96 (122)
T ss_dssp HHHHHHTT--BCCSEEEECSCCS--S--------------SCH-HHHHHHHHTSTTTTTSCEEEEESCCSHHH-HHHHHH
T ss_pred HHHHHHHh--cCCCEEEEeccCC--C--------------CcH-HHHHHHHHhcccccCCCEEEEecCCchHH-HHHHHh
Confidence 34444433 3478888887411 1 123 5788888764 588999998876653 445566
Q ss_pred cCCCCcc
Q 034147 86 LGIHSMF 92 (103)
Q Consensus 86 ~~l~~~~ 92 (103)
.|..+|+
T Consensus 97 ~Ga~~~l 103 (122)
T 3gl9_A 97 LGARKVM 103 (122)
T ss_dssp TTCSEEE
T ss_pred cChhhhc
Confidence 7766554
No 227
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=71.01 E-value=8.9 Score=23.11 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHCCC-eEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~-~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
|...++.++++++|+ .++.+|..+... .+.+.++.++.
T Consensus 53 p~l~~~~~~~~~~gv~~vv~Is~d~~~~-~~~~~~~~~~~ 91 (167)
T 2wfc_A 53 PGYVEQAAAIHGKGVDIIACMAVNDSFV-MDAWGKAHGAD 91 (167)
T ss_dssp HHHHHTHHHHHHTTCCEEEEEESSCHHH-HHHHHHHTTCT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCHHH-HHHHHHhcCCC
Confidence 445556677888899 888888777666 58888888875
No 228
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=70.58 E-value=13 Score=21.70 Aligned_cols=38 Identities=18% Similarity=0.290 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+...++.++++++|+.++.+|..+... .+.+++.+++.
T Consensus 56 ~~l~~~~~~~~~~~~~vv~vs~d~~~~-~~~~~~~~~~~ 93 (163)
T 3gkn_A 56 LDFNALLPEFDKAGAKILGVSRDSVKS-HDNFCAKQGFA 93 (163)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCHHH-HHHHHHHHCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHhCCC
Confidence 556677778888899999999877777 48888888764
No 229
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=70.14 E-value=12 Score=20.95 Aligned_cols=55 Identities=20% Similarity=0.329 Sum_probs=33.4
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..++++++|++-- + ..-.++++++++. +.+++++|+...... .....+.|...++
T Consensus 58 ~~~dlii~D~~l~--~---------------~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l 116 (143)
T 2qvg_A 58 IHPKLILLDINIP--K---------------MNGIEFLKELRDDSSFTDIEVFVLTAAYTSKD-KLAFESLNIRGHL 116 (143)
T ss_dssp CCCSEEEEETTCT--T---------------SCHHHHHHHHTTSGGGTTCEEEEEESCCCHHH-HHHHTTTTCCEEE
T ss_pred CCCCEEEEecCCC--C---------------CCHHHHHHHHHcCccccCCcEEEEeCCCCHHH-HHHHHhcCCCeEE
Confidence 3578888887421 1 1235777887763 588999998775542 3334455554443
No 230
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=69.88 E-value=4.1 Score=25.25 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++|.+++.+|+.....+
T Consensus 106 ~~~~~~~~~ak~~g~~vi~IT~~~~s~l 133 (201)
T 3fxa_A 106 GELLNLIPACKTKGSTLIGVTENPDSVI 133 (201)
T ss_dssp HHHHTTHHHHHHHTCEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHcCCeEEEEECCCCChh
Confidence 6788899999999999999998876654
No 231
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=69.74 E-value=13 Score=21.18 Aligned_cols=63 Identities=14% Similarity=0.245 Sum_probs=38.1
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcC
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
++++.+.. ..++++++|++-- + ....++++++++. ..+++++|+...... ....-..|
T Consensus 57 ~al~~l~~--~~~dlii~D~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~g 116 (150)
T 4e7p_A 57 EAIQLLEK--ESVDIAILDVEMP--V---------------KTGLEVLEWIRSEKLETKVVVVTTFKRAGY-FERAVKAG 116 (150)
T ss_dssp HHHHHHTT--SCCSEEEECSSCS--S---------------SCHHHHHHHHHHTTCSCEEEEEESCCCHHH-HHHHHHTT
T ss_pred HHHHHhhc--cCCCEEEEeCCCC--C---------------CcHHHHHHHHHHhCCCCeEEEEeCCCCHHH-HHHHHHCC
Confidence 44444443 3478888887532 1 1235677777764 578999998876553 44455667
Q ss_pred CCCcc
Q 034147 88 IHSMF 92 (103)
Q Consensus 88 l~~~~ 92 (103)
...++
T Consensus 117 ~~~~l 121 (150)
T 4e7p_A 117 VDAYV 121 (150)
T ss_dssp CSEEE
T ss_pred CcEEE
Confidence 65544
No 232
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=69.52 E-value=11 Score=23.38 Aligned_cols=54 Identities=15% Similarity=0.122 Sum_probs=37.3
Q ss_pred HHHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCch
Q 034147 9 NEALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAP 76 (103)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~ 76 (103)
++...++....+...+|++|..|..+++ +...+.|+.++..|-.++++=|++..
T Consensus 53 ~E~~~il~~i~~~~~vI~LD~~Gk~~sS--------------~~fA~~l~~~~~~G~~i~FvIGGa~G 106 (163)
T 1o6d_A 53 KETEDLTNRILPGSFVMVMDKRGEEVSS--------------EEFADFLKDLEMKGKDITILIGGPYG 106 (163)
T ss_dssp HHHHHHHTTCCTTCEEEEEEEEEEECCH--------------HHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred HHHHHHHHhcCCCCEEEEEcCCCCcCCH--------------HHHHHHHHHHHhcCCeEEEEEECCCC
Confidence 3444455555444448999999998863 56778888887777667777777643
No 233
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=69.17 E-value=13 Score=20.86 Aligned_cols=55 Identities=20% Similarity=0.346 Sum_probs=34.2
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
..++++++|++-- + .. -.++++++++. +.+++++|+...... ....-..|...++
T Consensus 61 ~~~dlvi~D~~l~--~--------------~~-g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~-~~~~~~~g~~~~l 119 (149)
T 1k66_A 61 PRPAVILLDLNLP--G--------------TD-GREVLQEIKQDEVLKKIPVVIMTTSSNPKD-IEICYSYSISSYI 119 (149)
T ss_dssp CCCSEEEECSCCS--S--------------SC-HHHHHHHHTTSTTGGGSCEEEEESCCCHHH-HHHHHHTTCSEEE
T ss_pred CCCcEEEEECCCC--C--------------CC-HHHHHHHHHhCcccCCCeEEEEeCCCCHHH-HHHHHHCCCCEEE
Confidence 3578888887421 1 12 35778888763 578999998776552 3444456665544
No 234
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=69.10 E-value=8 Score=23.68 Aligned_cols=59 Identities=19% Similarity=0.235 Sum_probs=39.9
Q ss_pred HHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 12 LEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 12 ~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
..++....+. .++++|..|..+++ +...+.|+.+...|-.++++=|++... .....++.
T Consensus 58 ~~il~~i~~~-~vi~Ld~~Gk~~sS--------------~~fA~~l~~~~~~g~~i~FvIGG~~Gl-~~~v~~rA 116 (155)
T 1ns5_A 58 EQMLAAAGKN-RIVTLDIPGKPWDT--------------PQLAAELERWKLDGRDVSLLIGGPEGL-SPACKAAA 116 (155)
T ss_dssp HHHHHHHTTS-EEEEEEEEEECCCH--------------HHHHHHHHHHHHHCSCEEEEECBTTBC-CHHHHHHC
T ss_pred HHHHHhcCCC-cEEEEcCCCCcCCH--------------HHHHHHHHHHHhcCCeEEEEEECCCCC-CHHHHHhh
Confidence 3344443344 58999999998863 567888888887776677777777554 35555544
No 235
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=68.76 E-value=9 Score=24.28 Aligned_cols=29 Identities=10% Similarity=0.221 Sum_probs=24.8
Q ss_pred ChhHHHHHHHHHH--CCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKE--KGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~--~G~~v~i~T~~~~~~i 78 (103)
.+.+.++++.+++ +|.+++.+|+.....+
T Consensus 119 t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~L 149 (220)
T 3etn_A 119 TREIVELTQLAHNLNPGLKFIVITGNPDSPL 149 (220)
T ss_dssp CHHHHHHHHHHHHHCTTCEEEEEESCTTSHH
T ss_pred CHHHHHHHHHHHhcCCCCeEEEEECCCCChh
Confidence 3678999999999 9999999998876654
No 236
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=68.67 E-value=9.7 Score=22.56 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=28.3
Q ss_pred hhHHHHHHHHHHCCCe-EEEEeCCCchhHHHHHHHHcCC
Q 034147 51 PHAKGILEALKEKGIH-VAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~-v~i~T~~~~~~i~~~~l~~~~l 88 (103)
|...++.++++++|+. ++.+|..+... .+.+.+++++
T Consensus 57 ~~l~~~~~~~~~~~v~~vv~Is~d~~~~-~~~~~~~~~~ 94 (162)
T 1tp9_A 57 PGFIEKAGELKSKGVTEILCISVNDPFV-MKAWAKSYPE 94 (162)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHH-HHHHHHTCTT
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCHHH-HHHHHHhcCC
Confidence 4555667777888999 88888777666 4788888887
No 237
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=67.87 E-value=6.7 Score=26.11 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=33.7
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
..||-...=+.|.+.|+|.+|+|-.+... +...++.-|+..
T Consensus 76 a~PGP~~ARE~l~~~~iP~IvI~D~p~~K-~kd~l~~~g~GY 116 (283)
T 1qv9_A 76 AAPGPSKAREMLADSEYPAVIIGDAPGLK-VKDEMEEQGLGY 116 (283)
T ss_dssp TSHHHHHHHHHHHTSSSCEEEEEEGGGGG-GHHHHHHTTCEE
T ss_pred CCCCchHHHHHHHhCCCCEEEEcCCcchh-hHHHHHhcCCcE
Confidence 45787777788899999999999888777 578889888753
No 238
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=67.78 E-value=15 Score=22.83 Aligned_cols=38 Identities=21% Similarity=0.132 Sum_probs=30.9
Q ss_pred hhHHHHHHHHHHCCC-eEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~-~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
++..+...+++++|+ .++.+|..+... ...+.+..++.
T Consensus 69 ~~f~~~~~ef~~~g~d~VigIS~D~~~~-~~~f~~~~~l~ 107 (176)
T 4f82_A 69 PGYVEHAEQLRAAGIDEIWCVSVNDAFV-MGAWGRDLHTA 107 (176)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESSCHHH-HHHHHHHTTCT
T ss_pred HHHHHHHHHHHhCCCCEEEEEeCCCHHH-HHHHHHHhCCC
Confidence 566778889999999 888899887676 48888888875
No 239
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=67.50 E-value=4.3 Score=25.22 Aligned_cols=25 Identities=4% Similarity=-0.072 Sum_probs=21.7
Q ss_pred hhHHHHHHHHHHCCCeEEEEeC-CCc
Q 034147 51 PHAKGILEALKEKGIHVAVASR-SPA 75 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~-~~~ 75 (103)
+...++..+++++|++++.+|| ...
T Consensus 91 ~~~ie~A~~ake~G~~vIaITs~~~~ 116 (170)
T 3jx9_A 91 SDLLASLARYDAWHTPYSIITLGDVT 116 (170)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESSCCC
T ss_pred HHHHHHHHHHHHCCCcEEEEeCcchh
Confidence 5689999999999999999999 443
No 240
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=66.50 E-value=20 Score=24.07 Aligned_cols=37 Identities=16% Similarity=0.351 Sum_probs=28.2
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcC
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
.+.+.++++.+++.|+.+.+.||+..+.. ...+...|
T Consensus 156 ~~~l~~ll~~~~~~g~~i~l~TNG~~~e~-l~~L~~~g 192 (342)
T 2yx0_A 156 YPYMGDLVEEFHKRGFTTFIVTNGTIPER-LEEMIKED 192 (342)
T ss_dssp STTHHHHHHHHHHTTCEEEEEECSCCHHH-HHHHHHTT
T ss_pred hhhHHHHHHHHHHCCCcEEEEcCCCcHHH-HHHHHhcC
Confidence 45789999999999999999998886553 33455443
No 241
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=66.38 E-value=8 Score=25.97 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=25.1
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.|.+.++++.++++|.+++.+|+++...+
T Consensus 153 T~~vi~al~~Ak~~Ga~~IaIT~~~~S~L 181 (306)
T 1nri_A 153 TPYVIAGLQYAKSLGALTISIASNPKSEM 181 (306)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEESSTTCHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCCChH
Confidence 37789999999999999999999886664
No 242
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=66.24 E-value=2.4 Score=26.24 Aligned_cols=23 Identities=9% Similarity=0.145 Sum_probs=20.1
Q ss_pred CcccChhHHHHHHHHHHCCCeEE
Q 034147 46 IPYLYPHAKGILEALKEKGIHVA 68 (103)
Q Consensus 46 ~~~~~~g~~~~l~~l~~~G~~v~ 68 (103)
...+++++.++++.+++.|++++
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~~~ 107 (250)
T 2c4n_A 85 KKAYVVGEGALIHELYKAGFTIT 107 (250)
T ss_dssp CEEEEECCTHHHHHHHHTTCEEC
T ss_pred CEEEEEcCHHHHHHHHHcCCccc
Confidence 34577899999999999999998
No 243
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=66.14 E-value=9.3 Score=23.58 Aligned_cols=38 Identities=16% Similarity=0.160 Sum_probs=29.4
Q ss_pred hhHHHHHHHHHHCCCe-EEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGIH-VAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~-v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
|...+..++++++|+. ++.+|..+... .+.+.++.++.
T Consensus 78 p~l~~~~~~~~~~gv~~vv~Is~d~~~~-~~~f~~~~~~~ 116 (184)
T 3uma_A 78 PGYLENRDAILARGVDDIAVVAVNDLHV-MGAWATHSGGM 116 (184)
T ss_dssp HHHHHTHHHHHTTTCCEEEEEESSCHHH-HHHHHHHHTCT
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCCHHH-HHHHHHHhCCC
Confidence 4455666778889998 88888877666 58888998876
No 244
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=66.07 E-value=16 Score=20.82 Aligned_cols=38 Identities=3% Similarity=0.019 Sum_probs=24.7
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. +.+++++|+...... ....-..|..+++
T Consensus 67 ~~~~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l 106 (153)
T 3cz5_A 67 IEATRHIRQWDGAARILIFTMHQGSAF-ALKAFEAGASGYV 106 (153)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCCeEEEEECCCCHHH-HHHHHHCCCcEEE
Confidence 5677777764 578999998776552 4444556765544
No 245
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=65.42 E-value=13 Score=22.48 Aligned_cols=38 Identities=18% Similarity=0.195 Sum_probs=30.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+...++.++++++|+.++.+|..+... ...+++.+++.
T Consensus 72 ~~l~~l~~~~~~~~~~vv~Vs~D~~~~-~~~~~~~~~~~ 109 (179)
T 3ixr_A 72 LEFNLLLPQFEQINATVLGVSRDSVKS-HDSFCAKQGFT 109 (179)
T ss_dssp HHHHHHHHHHHTTTEEEEEEESCCHHH-HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHcCCc
Confidence 556777788888899999899877777 58888888764
No 246
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=65.24 E-value=13 Score=20.57 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=26.3
Q ss_pred HHHHHHHHHH----CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 53 AKGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 53 ~~~~l~~l~~----~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
-.++++++++ ...+++++|+...... ....-+.|..+|+
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~s~~~~~~~-~~~~~~~g~~~~l 108 (129)
T 3h1g_A 66 GLDLVKKVRSDSRFKEIPIIMITAEGGKAE-VITALKAGVNNYI 108 (129)
T ss_dssp HHHHHHHHHTSTTCTTCCEEEEESCCSHHH-HHHHHHHTCCEEE
T ss_pred HHHHHHHHHhcCCCCCCeEEEEeCCCChHH-HHHHHHcCccEEE
Confidence 3678888876 3578999998876652 4445566766554
No 247
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=63.69 E-value=19 Score=23.37 Aligned_cols=66 Identities=12% Similarity=0.017 Sum_probs=38.2
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+..+.+++-+=|+.+... ............+.+.+..+++.|++++|++|+.... ....++++++.
T Consensus 10 ~~~~~iViKiGGs~l~~~---~~~~~~~~~i~~~a~~I~~l~~~G~~vViV~GgG~~~-~~~~~~~~g~~ 75 (255)
T 2jjx_A 10 RPYKRVLIKLSGGALADQ---TGNSFNSKRLEHIANEILSIVDLGIEVSIVIGGGNIF-RGHLAEEWGID 75 (255)
T ss_dssp CBCSEEEEEECGGGTSCS---SSCSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTC-CHHHHHHTTCC
T ss_pred ccCCEEEEEECHHHhCCC---CCCCCCHHHHHHHHHHHHHHHHCCCeEEEEECchHHH-hhhHHHHcCCC
Confidence 456778889989887521 0001112233455666667777899999999884321 12225566654
No 248
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=63.61 E-value=10 Score=25.61 Aligned_cols=40 Identities=10% Similarity=0.142 Sum_probs=29.4
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCc
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~ 91 (103)
...+.+-+..|++.|++++|++|+. .. +...++++++...
T Consensus 32 ~~~~a~~I~~l~~~G~~vVlVhGgg-~~-~~~~~~~~~~~~~ 71 (316)
T 2e9y_A 32 VKRASSIIADVLADGWRSVITHGNG-PQ-VGYLSEAFEALPP 71 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCH-HH-HHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCc-HH-HhHHHHHcCCCCC
Confidence 3455667777888899999998887 44 4777888876543
No 249
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=62.94 E-value=13 Score=24.61 Aligned_cols=36 Identities=22% Similarity=0.414 Sum_probs=28.1
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCC
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l 88 (103)
.++.+.++++.+++.|+.+.+.||+.... .++.++.
T Consensus 141 l~~~l~~li~~~~~~g~~~~l~TNG~~~~----~l~~L~~ 176 (311)
T 2z2u_A 141 LYPYLDELIKIFHKNGFTTFVVSNGILTD----VIEKIEP 176 (311)
T ss_dssp GSTTHHHHHHHHHHTTCEEEEEECSCCHH----HHHHCCC
T ss_pred chhhHHHHHHHHHHCCCcEEEECCCCCHH----HHHhCCC
Confidence 35679999999999999999999988532 3555554
No 250
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=62.86 E-value=17 Score=20.11 Aligned_cols=38 Identities=5% Similarity=0.004 Sum_probs=23.4
Q ss_pred HHHHHHHHH-CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~-~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ .+.+++++|+...... ....-..|...++
T Consensus 71 ~~~~~~l~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l 109 (140)
T 3cg0_A 71 VETAARLAAGCNLPIIFITSSQDVET-FQRAKRVNPFGYL 109 (140)
T ss_dssp HHHHHHHHHHSCCCEEEEECCCCHHH-HHHHHTTCCSEEE
T ss_pred HHHHHHHHhCCCCCEEEEecCCCHHH-HHHHHhcCCCEEE
Confidence 355555554 4789999998876552 4344456655443
No 251
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=62.75 E-value=14 Score=25.05 Aligned_cols=28 Identities=14% Similarity=0.197 Sum_probs=24.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.+.++.++++|.+++.+|+.....+
T Consensus 88 ~e~l~a~~~ak~~Ga~~iaIT~~~~S~L 115 (329)
T 3eua_A 88 PETVKAAAFARGKGALTIAMTFKPESPL 115 (329)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCChH
Confidence 6789999999999999999998886664
No 252
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=62.39 E-value=12 Score=24.32 Aligned_cols=64 Identities=6% Similarity=-0.125 Sum_probs=36.7
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
.+.++.-+=|+.+.... ...........+.+-+..+++.|++++|++|+.... ....++++++.
T Consensus 7 ~k~iViKlGGs~l~~~~---~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgG~~~-~g~~~~~lg~~ 70 (252)
T 1z9d_A 7 YQRILIKLSGEALAGEK---GVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLW-RGEPAADAGMD 70 (252)
T ss_dssp CSEEEEEECGGGGTCSS---SSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTC-CHHHHHHHTCC
T ss_pred CCEEEEEEchHHccCCC---CCCCCHHHHHHHHHHHHHHHhCCCEEEEEECCChHh-ccchHHHcCCC
Confidence 46688899999885200 000011233445666777778899999999764222 12214555654
No 253
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=61.89 E-value=16 Score=20.41 Aligned_cols=24 Identities=17% Similarity=0.389 Sum_probs=17.5
Q ss_pred HHHHHHHHHH----CCCeEEEEeCCCch
Q 034147 53 AKGILEALKE----KGIHVAVASRSPAP 76 (103)
Q Consensus 53 ~~~~l~~l~~----~G~~v~i~T~~~~~ 76 (103)
-.++++++++ ...+++++|+....
T Consensus 65 g~~~~~~l~~~~~~~~~~ii~~s~~~~~ 92 (140)
T 3grc_A 65 GVSLIRALRRDSRTRDLAIVVVSANARE 92 (140)
T ss_dssp HHHHHHHHHTSGGGTTCEEEEECTTHHH
T ss_pred HHHHHHHHHhCcccCCCCEEEEecCCCh
Confidence 3677777776 36899999987643
No 254
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=61.82 E-value=18 Score=20.02 Aligned_cols=38 Identities=16% Similarity=0.089 Sum_probs=23.5
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. +.+++++|+...... ....-..|...++
T Consensus 68 ~~~~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l 107 (140)
T 2qr3_A 68 LFWLHEIKRQYRDLPVVLFTAYADIDL-AVRGIKEGASDFV 107 (140)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEGGGHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHHhhCcCCCEEEEECCCCHHH-HHHHHHcCchhee
Confidence 4667777653 588999997765542 3344456665543
No 255
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=61.73 E-value=7.1 Score=25.00 Aligned_cols=24 Identities=8% Similarity=0.025 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
+.+.++++.++++|.+++.+|+..
T Consensus 122 ~~~i~~~~~Ak~~G~~vI~IT~~~ 145 (243)
T 3cvj_A 122 TVPVEMAIESRNIGAKVIAMTSMK 145 (243)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCc
Confidence 678999999999999999999874
No 256
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=61.73 E-value=19 Score=20.16 Aligned_cols=63 Identities=16% Similarity=0.209 Sum_probs=37.4
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHH
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~ 85 (103)
++++.+.. ..++++++|+.-- + .. -.++++++++. ..+++++|+...... ....-.
T Consensus 39 ~al~~~~~--~~~dlvl~D~~lp--~--------------~~-g~~~~~~lr~~~~~~~~pii~~t~~~~~~~-~~~~~~ 98 (136)
T 3t6k_A 39 EALQQIYK--NLPDALICDVLLP--G--------------ID-GYTLCKRVRQHPLTKTLPILMLTAQGDISA-KIAGFE 98 (136)
T ss_dssp HHHHHHHH--SCCSEEEEESCCS--S--------------SC-HHHHHHHHHHSGGGTTCCEEEEECTTCHHH-HHHHHH
T ss_pred HHHHHHHh--CCCCEEEEeCCCC--C--------------CC-HHHHHHHHHcCCCcCCccEEEEecCCCHHH-HHHHHh
Confidence 34444433 3478888887421 1 12 35677777763 578999998876552 444455
Q ss_pred cCCCCcc
Q 034147 86 LGIHSMF 92 (103)
Q Consensus 86 ~~l~~~~ 92 (103)
.|..+|+
T Consensus 99 ~ga~~~l 105 (136)
T 3t6k_A 99 AGANDYL 105 (136)
T ss_dssp HTCSEEE
T ss_pred cCcceEE
Confidence 6765544
No 257
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=61.68 E-value=7.1 Score=24.08 Aligned_cols=39 Identities=15% Similarity=-0.175 Sum_probs=29.6
Q ss_pred EEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCC
Q 034147 26 VFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS 73 (103)
Q Consensus 26 ~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~ 73 (103)
+-|=||||+-. ...+..|+.-.++.+++.+.++.++.-.
T Consensus 71 V~DSDgTLI~~---------~g~lsGGT~lT~~~a~~~~KP~l~i~l~ 109 (158)
T 3imk_A 71 VLDSDGTLIIS---------HGILKGGSALTEFFAEQYKKPCLHIDLD 109 (158)
T ss_dssp HHTSSEEEEEE---------SSSCCHHHHHHHHHHHHTTCCEEEEETT
T ss_pred hhhcCeEEEEe---------cCCCCCchHHHHHHHHHhCCCEEEEecc
Confidence 55889999852 1345678888889999999888888744
No 258
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=61.54 E-value=18 Score=19.84 Aligned_cols=63 Identities=22% Similarity=0.343 Sum_probs=36.3
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcC
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
++++.+.. ..++++++|++-.=. . -.++++++++. ..+++++|+...... ....-..|
T Consensus 42 ~a~~~l~~--~~~dlvi~d~~l~~~----------------~-g~~~~~~l~~~~~~~~ii~~t~~~~~~~-~~~~~~~g 101 (130)
T 3eod_A 42 DALELLGG--FTPDLMICDIAMPRM----------------N-GLKLLEHIRNRGDQTPVLVISATENMAD-IAKALRLG 101 (130)
T ss_dssp HHHHHHTT--CCCSEEEECCC----------------------CHHHHHHHHHTTCCCCEEEEECCCCHHH-HHHHHHHC
T ss_pred HHHHHHhc--CCCCEEEEecCCCCC----------------C-HHHHHHHHHhcCCCCCEEEEEcCCCHHH-HHHHHHcC
Confidence 34444432 347888888752211 1 24666777664 478999998886653 44445667
Q ss_pred CCCcc
Q 034147 88 IHSMF 92 (103)
Q Consensus 88 l~~~~ 92 (103)
..+++
T Consensus 102 ~~~~l 106 (130)
T 3eod_A 102 VEDVL 106 (130)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 66554
No 259
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=61.52 E-value=14 Score=25.44 Aligned_cols=29 Identities=17% Similarity=0.075 Sum_probs=24.9
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+.+.++++.++++|.+++.+|+.....+
T Consensus 120 T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~L 148 (375)
T 2zj3_A 120 TADTLMGLRYCKERGALTVGITNTVGSSI 148 (375)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTTCHH
T ss_pred CHHHHHHHHHHHHcCCcEEEEECCCCChH
Confidence 37889999999999999999999876654
No 260
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=61.32 E-value=23 Score=22.34 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHCCC-eEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~-~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
|...++.++++++|+ .++.+|..+... .+.+.++.++.
T Consensus 55 ~~l~~~~~~~~~~~~~~vv~is~d~~~~-~~~~~~~~~~~ 93 (241)
T 1nm3_A 55 PRYNELAPVFKKYGVDDILVVSVNDTFV-MNAWKEDEKSE 93 (241)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESSCHHH-HHHHHHHTTCT
T ss_pred HHHHHHHHHHHHCCCCEEEEEEcCCHHH-HHHHHHhcCCC
Confidence 555666777788899 888888777666 57888888764
No 261
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=61.20 E-value=14 Score=25.32 Aligned_cols=29 Identities=14% Similarity=0.029 Sum_probs=24.9
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+.+.++++.++++|.+++.+|+.....+
T Consensus 110 T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~L 138 (367)
T 2poc_A 110 TADSILALQYCLERGALTVGIVNSVGSSM 138 (367)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSTTSHH
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCChH
Confidence 37889999999999999999999876654
No 262
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=60.69 E-value=20 Score=20.14 Aligned_cols=38 Identities=11% Similarity=0.205 Sum_probs=23.3
Q ss_pred HHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCc
Q 034147 53 AKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (103)
Q Consensus 53 ~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~ 91 (103)
..++++++++. ..+++++|+...... ....-+.|..+|
T Consensus 82 g~~~~~~l~~~~~~~~ii~lt~~~~~~~-~~~~~~~ga~~~ 121 (146)
T 4dad_A 82 ELAAIEKLSRLHPGLTCLLVTTDASSQT-LLDAMRAGVRDV 121 (146)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESCCCHHH-HHHHHTTTEEEE
T ss_pred HHHHHHHHHHhCCCCcEEEEeCCCCHHH-HHHHHHhCCcee
Confidence 35677777664 588999998775552 333344554444
No 263
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=60.60 E-value=18 Score=20.05 Aligned_cols=42 Identities=14% Similarity=0.080 Sum_probs=28.6
Q ss_pred eEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 24 LVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 24 ~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
.++|=-||+..-. . .......+...+.++.|.+.|+++.+|.
T Consensus 38 ~vff~~dgV~~~~-----~-~~~~~~~~~~~~~l~~l~~~gv~v~~C~ 79 (117)
T 1jx7_A 38 RLFLMSDAVTAGL-----R-GQKPGEGYNIQQMLEILTAQNVPVKLCK 79 (117)
T ss_dssp EEEECGGGGGGGB-----S-CCCCSSSCCHHHHHHHHHHTTCCEEEEH
T ss_pred EEEEEchHHHHHh-----c-CCCCCcCCCHHHHHHHHHHCCCEEEEeH
Confidence 4777889997642 1 1111112567889999999999999884
No 264
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=60.27 E-value=13 Score=25.21 Aligned_cols=28 Identities=7% Similarity=0.000 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++|.+++.+|+.....+
T Consensus 114 ~e~l~a~~~ak~~Ga~vIaIT~~~~S~L 141 (342)
T 1j5x_A 114 TEVLLANDVLKKRNHRTIGITIEEESRL 141 (342)
T ss_dssp HHHHHHHHHHHHTTEEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCHH
Confidence 6789999999999999999998876654
No 265
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=60.05 E-value=20 Score=19.86 Aligned_cols=54 Identities=19% Similarity=0.209 Sum_probs=34.2
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++|++-. + ..-.++++++++. ..+++++|+...... ....-..|...++
T Consensus 51 ~~dlvi~d~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 106 (137)
T 3hdg_A 51 APDVIITDIRMP--K---------------LGGLEMLDRIKAGGAKPYVIVISAFSEMKY-FIKAIELGVHLFL 106 (137)
T ss_dssp CCSEEEECSSCS--S---------------SCHHHHHHHHHHTTCCCEEEECCCCCCHHH-HHHHHHHCCSEEC
T ss_pred CCCEEEEeCCCC--C---------------CCHHHHHHHHHhcCCCCcEEEEecCcChHH-HHHHHhCCcceeE
Confidence 477888887521 1 1235777777765 478888998876553 4445566766554
No 266
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=59.77 E-value=18 Score=20.08 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=24.8
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|...++
T Consensus 74 ~~~~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l 113 (137)
T 2pln_A 74 LSFVSRIKEKHSSIVVLVSSDNPTSEE-EVHAFEQGADDYI 113 (137)
T ss_dssp HHHHHHHHHHSTTSEEEEEESSCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCccEEEEeCCCCHHH-HHHHHHcCCceee
Confidence 5677777664 789999998876553 4444456665544
No 267
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=59.71 E-value=15 Score=25.03 Aligned_cols=28 Identities=11% Similarity=0.196 Sum_probs=24.7
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.+.++.++++|.+++.+|+.....+
T Consensus 105 ~e~l~a~~~ak~~Ga~~iaIT~~~~S~L 132 (344)
T 3fj1_A 105 PDIVAMTRNAGRDGALCVALTNDAASPL 132 (344)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHCCCcEEEEECCCCChH
Confidence 6889999999999999999998876664
No 268
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=59.28 E-value=16 Score=22.26 Aligned_cols=38 Identities=26% Similarity=0.172 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHCCCeEE-EEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGIHVA-VASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~-i~T~~~~~~i~~~~l~~~~l~ 89 (103)
|...+..++++++|+.++ ++|..+... .+.+.++.++.
T Consensus 65 p~l~~~~~~~~~~gv~vv~~iS~D~~~~-~~~f~~~~~~~ 103 (173)
T 3mng_A 65 PGFVEQAEALKAKGVQVVACLSVNDAFV-TGEWGRAHKAE 103 (173)
T ss_dssp HHHHHTHHHHHTTTCCEEEEEESSCHHH-HHHHHHHTTCT
T ss_pred HHHHHHHHHHHhCCCEEEEEEcCCCHHH-HHHHHHHhCCC
Confidence 445556677788999887 488777666 58888888875
No 269
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=58.78 E-value=18 Score=23.28 Aligned_cols=36 Identities=17% Similarity=0.267 Sum_probs=27.5
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-+....+ +.++..+|.+.
T Consensus 184 ~~~v~~~~~~G~~v~~wTvn~~~~~-~~~l~~~Gvdg 219 (248)
T 1zcc_A 184 PGIIEASRKAGLEIMVYYGGDDMAV-HREIATSDVDY 219 (248)
T ss_dssp HHHHHHHHHHTCEEEEECCCCCHHH-HHHHHHSSCSE
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHH-HHHHHHcCCCE
Confidence 5788999999999999997776663 55356677643
No 270
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=58.46 E-value=24 Score=22.73 Aligned_cols=50 Identities=14% Similarity=0.016 Sum_probs=31.1
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
.+.++.=+=|+.+.... ...........+.+-+..+++.|++++|++|+.
T Consensus 8 ~k~iViKlGGs~l~~~~---~~~~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG 57 (247)
T 2a1f_A 8 YKRILLKLSGEALQGED---GLGIDPAILDRMAVEIKELVEMGVEVSVVLGGG 57 (247)
T ss_dssp CSEEEEEECGGGGCCTT---SSSCCHHHHHHHHHHHHHHHTTTCEEEEEECCT
T ss_pred ccEEEEEEChhhhCCCC---CCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 46788899999885200 000011223445566677778899999999763
No 271
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=58.27 E-value=16 Score=24.86 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=24.0
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++|.+++.+|+.....+
T Consensus 116 ~e~~~a~~~ak~~Ga~vi~IT~~~~S~L 143 (355)
T 2a3n_A 116 KESVAIAEWCKAQGIRVVAITKNADSPL 143 (355)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHHCCCeEEEEECCCCChh
Confidence 6789999999999999999998875553
No 272
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=58.16 E-value=23 Score=20.07 Aligned_cols=38 Identities=21% Similarity=0.253 Sum_probs=24.2
Q ss_pred HHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. +.+++++|+...... ....-+.|..+|+
T Consensus 77 ~~l~~~l~~~~~~~~~piiils~~~~~~~-~~~~~~~ga~~~l 118 (149)
T 1i3c_A 77 REVLAEIKQNPDLKRIPVVVLTTSHNEDD-VIASYELHVNCYL 118 (149)
T ss_dssp HHHHHHHHHCTTTTTSCEEEEESCCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhCcCcCCCeEEEEECCCChHH-HHHHHHcCCcEEE
Confidence 5778888764 578999998775442 3333455665544
No 273
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=58.13 E-value=24 Score=20.11 Aligned_cols=63 Identities=13% Similarity=0.182 Sum_probs=36.6
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcC
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
++++.+.. ..++++++|++-- + ..-.++++++++. ..+++++|+...... ....-..|
T Consensus 49 ~a~~~l~~--~~~dlvi~D~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g 108 (153)
T 3hv2_A 49 QALQLLAS--REVDLVISAAHLP--Q---------------MDGPTLLARIHQQYPSTTRILLTGDPDLKL-IAKAINEG 108 (153)
T ss_dssp HHHHHHHH--SCCSEEEEESCCS--S---------------SCHHHHHHHHHHHCTTSEEEEECCCCCHHH-HHHHHHTT
T ss_pred HHHHHHHc--CCCCEEEEeCCCC--c---------------CcHHHHHHHHHhHCCCCeEEEEECCCCHHH-HHHHHhCC
Confidence 34444433 3478888888532 1 1235666666653 589999998876553 33344455
Q ss_pred -CCCcc
Q 034147 88 -IHSMF 92 (103)
Q Consensus 88 -l~~~~ 92 (103)
..+++
T Consensus 109 ~~~~~l 114 (153)
T 3hv2_A 109 EIYRYL 114 (153)
T ss_dssp CCSEEE
T ss_pred CcceEE
Confidence 55544
No 274
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=57.64 E-value=14 Score=25.33 Aligned_cols=28 Identities=14% Similarity=0.163 Sum_probs=24.6
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++|.+++.+|+.....+
T Consensus 103 ~e~l~a~~~ak~~Ga~~iaIT~~~~S~L 130 (347)
T 3fkj_A 103 AETVAAARVAREKGAATIGLVYQPDTPL 130 (347)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESSTTCHH
T ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCChH
Confidence 6789999999999999999998886664
No 275
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=57.34 E-value=18 Score=21.74 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHCCCe-EEEEeCCCchhHHHHHHHHcCC
Q 034147 51 PHAKGILEALKEKGIH-VAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~-v~i~T~~~~~~i~~~~l~~~~l 88 (103)
|...+..++++++|+. ++.+|..+... .+.+.++.++
T Consensus 65 p~l~~~~~~~~~~g~~~vv~Is~d~~~~-~~~~~~~~~~ 102 (171)
T 2pwj_A 65 PPYKHNIDKFKAKGVDSVICVAINDPYT-VNAWAEKIQA 102 (171)
T ss_dssp HHHHHTHHHHHHTTCSEEEEEESSCHHH-HHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCHHH-HHHHHHHhCC
Confidence 5556667778888999 88888777666 5888888886
No 276
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=57.26 E-value=5 Score=29.02 Aligned_cols=17 Identities=29% Similarity=0.452 Sum_probs=14.9
Q ss_pred CCCceEEEeCCCCcccc
Q 034147 20 NLPRLVVFDLDYTLWPF 36 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~ 36 (103)
+.++++-||+|.||...
T Consensus 15 ~~i~~iGFDmDyTLa~Y 31 (470)
T 4g63_A 15 RKIKLIGLDMDHTLIRY 31 (470)
T ss_dssp TSCCEEEECTBTTTBEE
T ss_pred ccCCEEEECCccchhcc
Confidence 56899999999999963
No 277
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=57.04 E-value=22 Score=19.50 Aligned_cols=39 Identities=13% Similarity=0.153 Sum_probs=23.2
Q ss_pred HHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 53 AKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 53 ~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
-.++++++++. ..+++++|+...... ....-..|..+++
T Consensus 61 g~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 101 (134)
T 3f6c_A 61 GIQVLETLRKRQYSGIIIIVSAKNDHFY-GKHCADAGANGFV 101 (134)
T ss_dssp HHHHHHHHHHTTCCSEEEEEECC---CT-HHHHHHTTCSEEE
T ss_pred hHHHHHHHHhcCCCCeEEEEeCCCChHH-HHHHHHhCCCEEE
Confidence 35677777764 478999998775542 3344566765544
No 278
>1ibx_B Chimera of IGG binding protein G and DNA fragmentation factor 45; DFF40, DFF45, protein-protein complex, CIDE, CIDE domain complex; HET: DNA; NMR {Streptococcus SP} SCOP: d.15.2.1
Probab=56.75 E-value=20 Score=21.71 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=23.5
Q ss_pred cHHHhhHHHHHHhhccCC-CCceEEEeCCCCccc
Q 034147 3 DLEKVKNEALEIIGQFEN-LPRLVVFDLDYTLWP 35 (103)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~-~~~~~~fD~DGTL~~ 35 (103)
.++.++..+.+.++.... ..-.++++-|||.++
T Consensus 83 SL~EL~~K~~~kL~l~~~~~~~~LvLeeDGTeVd 116 (145)
T 1ibx_B 83 CLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVD 116 (145)
T ss_dssp SHHHHHHHHHHHHTCSCTTSCCEEEETTTCCBCS
T ss_pred CHHHHHHHHHHHhcCCCCccccEEEEeeCCcEEe
Confidence 456677777777776543 344588899999996
No 279
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=56.17 E-value=13 Score=25.82 Aligned_cols=24 Identities=17% Similarity=0.139 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
+...+.|+++.++|++|+++|...
T Consensus 271 ~~~~~~l~~a~~~Gi~VV~~Src~ 294 (358)
T 2him_A 271 KAFLQELQEASDRGIVVVNLTQCM 294 (358)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC
Confidence 578889999999999999999533
No 280
>2j07_A Deoxyribodipyrimidine photo-lyase; flavoprotein, nucleotide-binding, DNA repair; HET: FAD HDF; 1.95A {Thermus thermophilus} SCOP: a.99.1.1 c.28.1.1 PDB: 1iqu_A* 1iqr_A* 2j08_A* 2j09_A*
Probab=56.13 E-value=9.9 Score=26.80 Aligned_cols=43 Identities=14% Similarity=0.238 Sum_probs=33.7
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+..++.++=+.|++.|+++.+..+.+... ...+++.++....+
T Consensus 50 l~~sL~~l~~~L~~~g~~l~~~~g~~~~~-l~~l~~~~~~~~v~ 92 (420)
T 2j07_A 50 FLENVRALREAYRARGGALWVLEGLPWEK-VPEAARRLKAKAVY 92 (420)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHcCCCEEE
Confidence 44666777788999999999999988777 48888888875543
No 281
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=55.71 E-value=20 Score=20.92 Aligned_cols=38 Identities=18% Similarity=0.163 Sum_probs=27.9
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+...++.++++++|+.++.+|..+... ...+++.+++.
T Consensus 50 ~~l~~~~~~~~~~~v~vv~vs~d~~~~-~~~~~~~~~~~ 87 (161)
T 3drn_A 50 SAFRDNWDLLKDYDVVVIGVSSDDINS-HKRFKEKYKLP 87 (161)
T ss_dssp HHHHHTHHHHHTTCEEEEEEESCCHHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCHHH-HHHHHHHhCCC
Confidence 445556677777888888888777666 48888887764
No 282
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=55.70 E-value=21 Score=22.70 Aligned_cols=63 Identities=8% Similarity=-0.076 Sum_probs=37.8
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHH-HHHcCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTF-LHKLGIH 89 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~-l~~~~l~ 89 (103)
.+.++.=+=|..+.... .............+-+..+++.|++++|++|+.. . +... ++++++.
T Consensus 7 ~~~iViK~GGs~l~~~~---~~~~~~~~~~~~~~~i~~l~~~g~~vviV~GgG~-~-~~g~~~~~~~~~ 70 (239)
T 1ybd_A 7 YKRVLLKLSGESLMGSD---PFGINHDTIVQTVGEIAEVVKMGVQVGIVVGGGN-I-FRGVSAQAGSMD 70 (239)
T ss_dssp CSEEEEEECGGGGGTTS---SSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCHH-H-HHHHHHHHTTSC
T ss_pred CCEEEEEEchHHhCCCC---CCCCCHHHHHHHHHHHHHHHHCCCeEEEEECCcH-H-HhchhHHHcCCC
Confidence 46688899998885210 0000112234556667777888999999998742 2 2333 4566654
No 283
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=55.50 E-value=13 Score=25.43 Aligned_cols=27 Identities=19% Similarity=0.118 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchh
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPD 77 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~ 77 (103)
+...+.|+++.++|++|+++|......
T Consensus 257 ~~~~~~l~~a~~~Gi~VV~~Sr~~~G~ 283 (327)
T 1o7j_A 257 VRGIAGMRKALEKGVVVMRSTRTGNGI 283 (327)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSBSC
T ss_pred HHHHHHHHHHHHCCceEEEECCCCCCC
Confidence 778889999999999999888654433
No 284
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=55.34 E-value=16 Score=23.89 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
..+.+-+..+++.|++++|+.|+. .. +...++++++.
T Consensus 15 ~~~~~~i~~l~~~G~~vViVhGgg-~~-~~~~~~~~~~~ 51 (269)
T 2egx_A 15 EAVAKDAASLWKEGVKLLLVHGGS-AE-TNKVAEALGHP 51 (269)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCH-HH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCeEEEEECCh-HH-HHHHHHHcCCc
Confidence 455666677888899999999887 45 37778888876
No 285
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=55.26 E-value=23 Score=22.35 Aligned_cols=35 Identities=14% Similarity=0.313 Sum_probs=26.6
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-++...+ + .+..+|.+.
T Consensus 176 ~~~v~~~~~~G~~v~~wtvn~~~~~-~-~l~~~Gvdg 210 (224)
T 1vd6_A 176 EEAVAGWRKRGLFVVAWTVNEEGEA-R-RLLALGLDG 210 (224)
T ss_dssp HHHHHHHHHTTCEEEEECCCCHHHH-H-HHHHTTCSE
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHH-H-HHHhcCCCE
Confidence 6789999999999999997775552 4 456677543
No 286
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=55.23 E-value=21 Score=23.04 Aligned_cols=35 Identities=14% Similarity=0.365 Sum_probs=27.1
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-+....+ +. +..+|.+.
T Consensus 194 ~~~v~~~~~~G~~V~~WTvn~~~~~-~~-l~~~GVDg 228 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWAAHTPSQI-TK-ALDLGVKV 228 (250)
T ss_dssp HHHHHHHHHTTCEEEEECCCSHHHH-HH-HHHHTCSE
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHH-HH-HHHcCCCE
Confidence 5789999999999999998876653 44 55677644
No 287
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=55.18 E-value=24 Score=19.22 Aligned_cols=49 Identities=16% Similarity=0.185 Sum_probs=29.9
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC----CCeEEEEeCCCchh
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK----GIHVAVASRSPAPD 77 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~----G~~v~i~T~~~~~~ 77 (103)
++++.+.. ..++++++|++-. + ....++++++++. ..+++++|+.....
T Consensus 38 ~a~~~l~~--~~~dlii~D~~l~--~---------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 90 (127)
T 3i42_A 38 DALHAMST--RGYDAVFIDLNLP--D---------------TSGLALVKQLRALPMEKTSKFVAVSGFAKND 90 (127)
T ss_dssp HHHHHHHH--SCCSEEEEESBCS--S---------------SBHHHHHHHHHHSCCSSCCEEEEEECC-CTT
T ss_pred HHHHHHHh--cCCCEEEEeCCCC--C---------------CCHHHHHHHHHhhhccCCCCEEEEECCcchh
Confidence 34444443 3478888887422 1 1236778888764 57899999776544
No 288
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=54.90 E-value=12 Score=23.02 Aligned_cols=22 Identities=14% Similarity=0.305 Sum_probs=19.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeC
Q 034147 51 PHAKGILEALKEKGIHVAVASR 72 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~ 72 (103)
|...++++.+++.|+++..|+.
T Consensus 102 ~~l~eli~~a~~~Gvk~~aC~~ 123 (160)
T 3pnx_A 102 PKLSDLLSGARKKEVKFYACQL 123 (160)
T ss_dssp CCHHHHHHHHHHTTCEEEEEHH
T ss_pred CCHHHHHHHHHHCCCEEEEehh
Confidence 5578999999999999999863
No 289
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=54.79 E-value=12 Score=20.80 Aligned_cols=38 Identities=8% Similarity=0.086 Sum_probs=24.1
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+++
T Consensus 75 ~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 114 (135)
T 3snk_A 75 KPGIVEARALWATVPLIAVSDELTSEQ-TRVLVRMNASDWL 114 (135)
T ss_dssp STTHHHHHGGGTTCCEEEEESCCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhhCCCCcEEEEeCCCCHHH-HHHHHHcCcHhhc
Confidence 3455566654 489999998876653 4445566765554
No 290
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=54.51 E-value=13 Score=24.93 Aligned_cols=59 Identities=15% Similarity=0.119 Sum_probs=36.8
Q ss_pred eEEEeCCCCcccccccccccCCCc----ccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 24 LVVFDLDYTLWPFYCECCYEDEIP----YLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 24 ~~~fD~DGTL~~~~~~~~~~~~~~----~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++.=+-|..+.. ..... .....+.+-+..|++.|++++|++|+. .. +...++++++..
T Consensus 4 ~iVIKlGGs~l~~------~~~~~~~~~~~~~~~a~~I~~l~~~G~~vVlVhGgg-~~-~~~~l~~~~~~~ 66 (310)
T 2we5_A 4 KMVVALGGNAILS------NDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNG-PQ-VGNLLLQQQAAD 66 (310)
T ss_dssp EEEEECCGGGGCC------SSCSHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCH-HH-HHHHHHHHHHTC
T ss_pred EEEEEEChHHhcC------CCCChHHHHHHHHHHHHHHHHHHHCCCeEEEEECCc-HH-HhHHHHHcCCCC
Confidence 4666777776641 00000 223445666777788899999999777 45 477777776543
No 291
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=54.44 E-value=38 Score=21.60 Aligned_cols=35 Identities=20% Similarity=0.316 Sum_probs=26.7
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-+....+ + .+..+|.+.
T Consensus 197 ~~~v~~~~~~G~~v~~wTvn~~~~~-~-~l~~~Gvdg 231 (247)
T 2otd_A 197 KARVMQLKDAGLRILVYTVNKPQHA-A-ELLRWGVDC 231 (247)
T ss_dssp HHHHHHHHHTTCEEEEECCCCHHHH-H-HHHHHTCSE
T ss_pred HHHHHHHHHCCCEEEEEccCCHHHH-H-HHHHcCCCE
Confidence 6789999999999999997776553 4 455677643
No 292
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=54.15 E-value=33 Score=21.84 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHCCC---eEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 52 HAKGILEALKEKGI---HVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 52 g~~~~l~~l~~~G~---~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.+..+++.+++.++ .++|+|+++... .....+.+|++-
T Consensus 14 ~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~-~~~~A~~~gIp~ 54 (216)
T 2ywr_A 14 NLQAIIDAIESGKVNASIELVISDNPKAY-AIERCKKHNVEC 54 (216)
T ss_dssp HHHHHHHHHHTTSSCEEEEEEEESCTTCH-HHHHHHHHTCCE
T ss_pred HHHHHHHHHHhCCCCCeEEEEEeCCCChH-HHHHHHHcCCCE
Confidence 35667777776654 356777766555 466677777753
No 293
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=54.11 E-value=28 Score=22.48 Aligned_cols=50 Identities=12% Similarity=-0.047 Sum_probs=31.4
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS 73 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~ 73 (103)
.++-+++-+=|..+.... ...-.........+.+..+++.|++++|++|+
T Consensus 8 ~~~riViKlGGs~l~~~~---~~~~~~~~i~~la~~i~~l~~~G~~vviV~gG 57 (243)
T 3ek6_A 8 SYRRILLKLSGEALMGDG---DYGIDPKVINRLAHEVIEAQQAGAQVALVIGG 57 (243)
T ss_dssp SCSEEEEEECGGGGTTTS---SSSCCHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred cCcEEEEEEchhhccCCC---CCCCCHHHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 456788899888775210 00001122344556777788889999999974
No 294
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=54.04 E-value=14 Score=25.30 Aligned_cols=26 Identities=12% Similarity=0.132 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCch
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAP 76 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~ 76 (103)
+...+.|+++.++|++|+++|.....
T Consensus 258 ~~~~~~l~~a~~~Gi~VV~~Sr~~~G 283 (332)
T 2wlt_A 258 AGFLKAMQEASQMGVVIVRSSRVGSG 283 (332)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCC
Confidence 77888999999999999998854433
No 295
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=54.02 E-value=26 Score=19.42 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=26.2
Q ss_pred HHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 53 AKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 53 ~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
-.++++++++. ..+++++|+...... ....-..|..+++
T Consensus 67 g~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~ga~~~l 107 (136)
T 3kto_A 67 GIELLETLVKRGFHLPTIVMASSSDIPT-AVRAMRASAADFI 107 (136)
T ss_dssp HHHHHHHHHHTTCCCCEEEEESSCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHcChHHhe
Confidence 36778888875 578999998886653 4444566765544
No 296
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=53.93 E-value=14 Score=25.26 Aligned_cols=25 Identities=32% Similarity=0.432 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCc
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
+...+.|+++.++|++|+++|....
T Consensus 255 ~~~~~~l~~a~~~gi~VV~~Sr~~~ 279 (330)
T 1wsa_A 255 PLTQNALEKAAKSGVVVARSSRVGS 279 (330)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 7788899999999999999985443
No 297
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=53.58 E-value=14 Score=24.58 Aligned_cols=25 Identities=12% Similarity=-0.003 Sum_probs=22.5
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
.+.+.++++.++++|.+++.+|+..
T Consensus 92 T~e~~~a~~~ak~~g~~~iaIT~~~ 116 (302)
T 1tzb_A 92 TIETLYTVEYAKRRRIPAVAITTGG 116 (302)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEESST
T ss_pred CHHHHHHHHHHHHCCCeEEEECCCc
Confidence 3788999999999999999999887
No 298
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=53.57 E-value=73 Score=25.42 Aligned_cols=60 Identities=12% Similarity=0.259 Sum_probs=36.5
Q ss_pred HHHHHHhhccCC---CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 9 NEALEIIGQFEN---LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 9 ~~~~~~~~~~~~---~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
++.+++.....+ ..+++.+|.|.+=-..+.++ .-....||...+++++|+++|.++++.-
T Consensus 448 ~ev~~va~~~re~gIPlDvi~lD~~y~~~~~~~dF---twD~~rFPdp~~mv~~Lh~~G~k~vl~V 510 (1020)
T 2xvl_A 448 DEIIQNLKEYRDRKIPIDNIVLDWSYWPEDAWGSH---DFDKQFFPDPKALVDKVHAMNAQIMISV 510 (1020)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECSCCSCTTCTTSC---CCCTTTCSCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcceEEEeccccccCcccce---EEChhhCCCHHHHHHHHHHCCCEEEEEE
Confidence 344444443322 25788999987521111111 1123467889999999999999988743
No 299
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=53.47 E-value=14 Score=21.44 Aligned_cols=39 Identities=8% Similarity=0.027 Sum_probs=28.7
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCC-chhHHHHHHHHcCCC
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSP-APDIAKTFLHKLGIH 89 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~-~~~i~~~~l~~~~l~ 89 (103)
-+.+.++++++.++|.+.++++.+. .+. +....++.|+.
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~~G~~~~e-~~~~a~~~Gir 107 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFNPGTENEE-LEEILSENGIE 107 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEECTTCCCHH-HHHHHHHTTCE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCChHH-HHHHHHHcCCe
Confidence 3456778899999999887787655 345 47778888874
No 300
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A
Probab=53.13 E-value=13 Score=20.37 Aligned_cols=56 Identities=14% Similarity=0.109 Sum_probs=31.6
Q ss_pred CCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCC
Q 034147 20 NLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 20 ~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l 88 (103)
..++.+++|+-++=+- ...-..-..++.++++++|..+.++.-+ +. +...++..|+
T Consensus 42 ~~~~~vvlDls~v~~i----------Dssgl~~L~~~~~~~~~~g~~l~l~~~~--~~-v~~~l~~~g~ 97 (99)
T 3oiz_A 42 EALDRVVIDVSRAHIW----------DISSVQALDMAVLKFRREGAEVRIVGMN--EA-SETMVDRLAI 97 (99)
T ss_dssp SCCSEEEEEEEEEEEC----------SHHHHHHHHHHHHHHHHTTCEEEEESHH--HH-HTTCC-----
T ss_pred CCCCEEEEECCCCCcc----------CHHHHHHHHHHHHHHHhCCCEEEEEcCC--HH-HHHHHHHhcC
Confidence 3567799999876432 1111233566778899999999877432 33 2445555554
No 301
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=52.95 E-value=29 Score=20.12 Aligned_cols=37 Identities=22% Similarity=0.170 Sum_probs=26.1
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
|...++.++++++| .++.+|..+... ...+.+.+++.
T Consensus 56 ~~l~~~~~~~~~~~-~vv~is~d~~~~-~~~~~~~~~~~ 92 (159)
T 2a4v_A 56 SGFRDNYQELKEYA-AVFGLSADSVTS-QKKFQSKQNLP 92 (159)
T ss_dssp HHHHHHHHHHTTTC-EEEEEESCCHHH-HHHHHHHHTCS
T ss_pred HHHHHHHHHHHhCC-cEEEEeCCCHHH-HHHHHHHhCCC
Confidence 44555666677778 887788777666 47788888764
No 302
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=52.79 E-value=26 Score=22.58 Aligned_cols=35 Identities=14% Similarity=0.103 Sum_probs=26.8
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-+....+ + .+..+|.+.
T Consensus 200 ~~~v~~~~~~G~~v~~WTvn~~~~~-~-~l~~~GVdg 234 (252)
T 3qvq_A 200 VQQVSDIKAAGYKVLAFTINDESLA-L-KLYNQGLDA 234 (252)
T ss_dssp HHHHHHHHHTTCEEEEECCCCHHHH-H-HHHHTTCCE
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHH-H-HHHHcCCCE
Confidence 5788999999999999998776652 4 455677643
No 303
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=52.71 E-value=30 Score=19.65 Aligned_cols=38 Identities=3% Similarity=0.017 Sum_probs=23.9
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++.+++. +.+++++|+...... ....-..|...++
T Consensus 63 ~~~~~~l~~~~~~~pii~ls~~~~~~~-~~~~~~~g~~~~l 102 (155)
T 1qkk_A 63 LALFRKILALDPDLPMILVTGHGDIPM-AVQAIQDGAYDFI 102 (155)
T ss_dssp HHHHHHHHHHCTTSCEEEEECGGGHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHHhhCCCCCEEEEECCCChHH-HHHHHhcCCCeEE
Confidence 4666776653 588999998775542 3344456665544
No 304
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=52.56 E-value=15 Score=25.04 Aligned_cols=25 Identities=24% Similarity=0.291 Sum_probs=20.9
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCc
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPA 75 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~ 75 (103)
+...+.|+++.++|++|+++|....
T Consensus 251 ~~~~~~l~~a~~~gi~VV~~Sr~~~ 275 (326)
T 1nns_A 251 KSVFDTLATAAKTGTAVVRSSRVPT 275 (326)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCC
Confidence 7788899999999999999985443
No 305
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=52.51 E-value=26 Score=19.49 Aligned_cols=38 Identities=3% Similarity=-0.067 Sum_probs=24.5
Q ss_pred HHHHHHHHH---CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE---KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~---~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ...+++++|+...... ....-+.|...|+
T Consensus 68 ~~~~~~lr~~~~~~~~ii~lt~~~~~~~-~~~~~~~ga~~~l 108 (133)
T 2r25_B 68 LLSTKMIRRDLGYTSPIVALTAFADDSN-IKECLESGMNGFL 108 (133)
T ss_dssp HHHHHHHHHHSCCCSCEEEEESCCSHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhhcCCCCCEEEEECCCCHHH-HHHHHHcCCCEEE
Confidence 467777775 2478999998876552 3444556765554
No 306
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=52.45 E-value=30 Score=19.58 Aligned_cols=63 Identities=21% Similarity=0.285 Sum_probs=37.8
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcC
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
++++.+.. ..++++++|++-- + ..-.++++++++. ..+++++|+...... ....-..|
T Consensus 52 ~a~~~l~~--~~~dlii~d~~l~--~---------------~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g 111 (152)
T 3eul_A 52 AALELIKA--HLPDVALLDYRMP--G---------------MDGAQVAAAVRSYELPTRVLLISAHDEPAI-VYQALQQG 111 (152)
T ss_dssp HHHHHHHH--HCCSEEEEETTCS--S---------------SCHHHHHHHHHHTTCSCEEEEEESCCCHHH-HHHHHHTT
T ss_pred HHHHHHHh--cCCCEEEEeCCCC--C---------------CCHHHHHHHHHhcCCCCeEEEEEccCCHHH-HHHHHHcC
Confidence 34444433 2478888887531 1 1235677777764 478999998886653 44445667
Q ss_pred CCCcc
Q 034147 88 IHSMF 92 (103)
Q Consensus 88 l~~~~ 92 (103)
..+++
T Consensus 112 ~~~~l 116 (152)
T 3eul_A 112 AAGFL 116 (152)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 65544
No 307
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=52.40 E-value=21 Score=23.15 Aligned_cols=62 Identities=6% Similarity=-0.035 Sum_probs=38.4
Q ss_pred CceEEEeCCCCcccccccccccCCCcccC-hhHHHHHHHHHHCCCeEE-EEeCCCchhHHHHHHHHcCCCCcc
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLY-PHAKGILEALKEKGIHVA-VASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~-~g~~~~l~~l~~~G~~v~-i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
++.++.=+-|..+.. .... ..+. +....+.+.++. |++++ |++|+. .. ....++++++...|
T Consensus 3 ~k~iViKiGG~~l~~-----~~~~-~~l~~~~l~~l~~~i~~-G~~vv~lVhGGG-~~-~~~~~~~~gi~~~~ 66 (249)
T 3ll5_A 3 FTMMILKIGGSVITD-----KSAY-RTARTYAIRSIVKVLSG-IEDLVCVVHGGG-SF-GHIKAMEFGLPGPK 66 (249)
T ss_dssp -CCEEEEECHHHHBC-----TTST-TCBCHHHHHHHHHHHHT-CTTEEEEEECCG-GG-THHHHHHHTCSEEC
T ss_pred ceEEEEEECccEEec-----Cccc-ccchHHHHHHHHHHHhc-CCceEEEEECcc-HH-HHHHHHHhCCCcCC
Confidence 345677777776641 1111 1122 235566777776 99998 999885 44 37778899987654
No 308
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=52.24 E-value=28 Score=21.57 Aligned_cols=25 Identities=20% Similarity=0.348 Sum_probs=20.9
Q ss_pred Chh-HHHHHHHHHHCCCeEEEEeCCC
Q 034147 50 YPH-AKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 50 ~~g-~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
.+. +.++++.+++.|+++.+.||+.
T Consensus 83 ~~~~l~~l~~~~~~~~~~i~i~Tng~ 108 (245)
T 3c8f_A 83 QAEFVRDWFRACKKEGIHTCLDTNGF 108 (245)
T ss_dssp GHHHHHHHHHHHHTTTCCEEEEECCC
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 355 5899999999999999999873
No 309
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=51.88 E-value=33 Score=22.87 Aligned_cols=49 Identities=12% Similarity=0.047 Sum_probs=32.1
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRS 73 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~ 73 (103)
..+.+++-+=|.++... ...-.......+.+-+..+++.|++++|++|+
T Consensus 49 ~~krIViKlGGs~L~~~----~~~ld~~~i~~la~~I~~l~~~G~~vviV~Gg 97 (281)
T 3nwy_A 49 GYSRVLLKLGGEMFGGG----QVGLDPDVVAQVARQIADVVRGGVQIAVVIGG 97 (281)
T ss_dssp CCSEEEEEECGGGGGTT----SSSCCHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCcEEEEEEchhhccCC----CCCCCHHHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 35778999988888521 10111122344567778888899999999964
No 310
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=51.71 E-value=60 Score=24.43 Aligned_cols=45 Identities=11% Similarity=0.256 Sum_probs=30.8
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
.+++.+|+|-+ +.+.++. -....+|...+++++|+++|.++++.-
T Consensus 194 ~dvi~lD~dy~--~~~~~ft---~d~~~FPdp~~mv~~Lh~~G~k~v~~i 238 (666)
T 3nsx_A 194 IDMIYMDIDYM--QDFKDFT---VNEKNFPDFPEFVKEMKDQELRLIPII 238 (666)
T ss_dssp CCEEEECGGGS--STTCTTC---CCTTTCTTHHHHHHHHHTTTCEEEEEE
T ss_pred cceEEEecHHH--Hhhcccc---cChhhCCCHHHHHHHHHHcCceEEeee
Confidence 58889998753 2111111 112467899999999999999988754
No 311
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=51.53 E-value=20 Score=24.49 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHCC-CeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKG-IHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G-~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++| .+++.+|+.....+
T Consensus 113 ~e~l~a~~~ak~~G~a~viaIT~~~~S~L 141 (368)
T 1moq_A 113 ADTLAGLRLSKELGYLGSLAICNVPGSSL 141 (368)
T ss_dssp HHHHHHHHHHTTTTCSEEEEEESSTTCHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEECCCCChH
Confidence 67899999999999 99999998876654
No 312
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=51.50 E-value=32 Score=20.80 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=28.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+.+.++++.+.|..++++..+-... +..++.+.|+.
T Consensus 61 l~~~v~kI~~~g~nVVl~~k~I~d~-a~~~l~k~gI~ 96 (159)
T 1ass_A 61 FKQMVEKIKKSGANVVLCQKGIDDV-AQHYLAKEGIY 96 (159)
T ss_dssp HHHHHHHHHHTTCSEEEESSCBCHH-HHHHHHHTTCE
T ss_pred HHHHhhhhhhCCCeEEEECCccCHH-HHHHHHHCCCE
Confidence 4668888999999988887777665 78899888864
No 313
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=51.47 E-value=63 Score=23.46 Aligned_cols=25 Identities=12% Similarity=0.251 Sum_probs=21.3
Q ss_pred cCh-hHHHHHHHHHHCCCeEEEEeCC
Q 034147 49 LYP-HAKGILEALKEKGIHVAVASRS 73 (103)
Q Consensus 49 ~~~-g~~~~l~~l~~~G~~v~i~T~~ 73 (103)
-|| |+..+.++++++|.+++|-+..
T Consensus 91 kFP~Glk~Lad~ih~~GlKfGIw~~p 116 (479)
T 3lrk_A 91 KFPNGMGHVADHLHNNSFLFGMYSSA 116 (479)
T ss_dssp TCTTCHHHHHHHHHHTTCEEEEEEES
T ss_pred hcCCCHHHHHHHHHHCCCeeEEEecC
Confidence 444 5999999999999999998844
No 314
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=51.29 E-value=19 Score=24.59 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=24.8
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+.+.+.++.++++|.+++.+|+.....+
T Consensus 95 T~e~l~a~~~ak~~ga~~iaIT~~~~S~L 123 (352)
T 3g68_A 95 SYSTYNAMKLAEDKGCKIASMAGCKNALI 123 (352)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESSTTCGG
T ss_pred CHHHHHHHHHHHHCCCCEEEEeCCCCChH
Confidence 36789999999999999999998776554
No 315
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=50.82 E-value=26 Score=19.05 Aligned_cols=38 Identities=13% Similarity=0.248 Sum_probs=24.8
Q ss_pred HHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-+.|...++
T Consensus 67 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 108 (129)
T 1p6q_A 67 LGLLQAVRANPATKKAAFIILTAQGDRAL-VQKAAALGANNVL 108 (129)
T ss_dssp HHHHHHHTTCTTSTTCEEEECCSCCCHHH-HHHHHHHTCSCEE
T ss_pred HHHHHHHhcCccccCCCEEEEeCCCCHHH-HHHHHHcCCCEEE
Confidence 5678888763 578999998776552 3334456765554
No 316
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=50.72 E-value=57 Score=25.03 Aligned_cols=24 Identities=29% Similarity=0.653 Sum_probs=20.5
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEe
Q 034147 48 YLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
..+|...+++++|+++|.++++..
T Consensus 323 ~~FPdp~~mv~~Lh~~G~k~~l~i 346 (773)
T 2f2h_A 323 LTFPDPEGMIRRLKAKGLKICVWI 346 (773)
T ss_dssp TTCSCHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCCHHHHHHHHHHCCCEEEEEe
Confidence 356778999999999999998865
No 317
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=50.53 E-value=34 Score=21.59 Aligned_cols=37 Identities=16% Similarity=0.365 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHH---HHHHcCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKT---FLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~---~l~~~~l~ 89 (103)
..+.+.+..+++.|++++|++|+.. . +.. .++.+++.
T Consensus 21 ~~~~~~i~~l~~~g~~vvlV~ggG~-~-~~~~~~~~~~~g~~ 60 (226)
T 2j4j_A 21 IVLRQSIKELADNGFRVGIVTGGGS-T-ARRYIKLAREIGIG 60 (226)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCHH-H-HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhCCCeEEEEECcch-H-hchhHHHHHHhCCC
Confidence 4556667777778999999998742 2 344 36777664
No 318
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=50.52 E-value=20 Score=24.74 Aligned_cols=28 Identities=14% Similarity=0.111 Sum_probs=24.4
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+.+.+.++.++++|.+++.+|+.....+
T Consensus 111 ~e~l~a~~~ak~~Ga~~IaIT~~~~S~L 138 (366)
T 3knz_A 111 LSTLAAMERARNVGHITASMAGVAPATI 138 (366)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSSSCGG
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCChh
Confidence 6889999999999999999998776554
No 319
>1d4b_A CIDE B, human cell death-inducing effector B; alpha/beta roll, apoptosis; NMR {Homo sapiens} SCOP: d.15.2.1
Probab=49.68 E-value=12 Score=22.02 Aligned_cols=31 Identities=19% Similarity=0.021 Sum_probs=20.5
Q ss_pred HHHhhHHHHHHhhccCCCCceEEEeCCCCcccc
Q 034147 4 LEKVKNEALEIIGQFENLPRLVVFDLDYTLWPF 36 (103)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~fD~DGTL~~~ 36 (103)
++.+...+.+.++. . ..-.++++-|||.++.
T Consensus 56 L~EL~~K~~~~l~l-~-~~~~lvLeeDGT~Vdd 86 (122)
T 1d4b_A 56 RQELLAKALETLLL-N-GVLTLVLEEDGTAVDS 86 (122)
T ss_dssp SSTHHHHHHHHHSC-C-SSCEEEETTTTEEECS
T ss_pred HHHHHHHHHHHhcc-C-CCcEEEEEeCCcEEec
Confidence 34555556666666 2 3345888999999974
No 320
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=49.42 E-value=31 Score=18.95 Aligned_cols=39 Identities=10% Similarity=0.269 Sum_probs=25.9
Q ss_pred HHHHHHHHHHC---CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 53 AKGILEALKEK---GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 53 ~~~~l~~l~~~---G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
-.++++++++. ..+++++|+...... ....-..|...++
T Consensus 67 g~~~~~~l~~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 108 (136)
T 3hdv_A 67 GLDLIRTIRASERAALSIIVVSGDTDVEE-AVDVMHLGVVDFL 108 (136)
T ss_dssp HHHHHHHHHTSTTTTCEEEEEESSCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCChHH-HHHHHhCCcceEE
Confidence 35778888765 478999998876553 4445566765544
No 321
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=49.38 E-value=30 Score=21.72 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHH---HHHHcCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKT---FLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~---~l~~~~l~ 89 (103)
..+.+.+..+++ |++++|++|+. +. +.. .+++++++
T Consensus 20 ~~~~~~i~~l~~-g~~vvlV~ggG-~~-~~~~~~~~~~~g~~ 58 (219)
T 2ij9_A 20 REFAKTIESVAQ-QNQVFVVVGGG-KL-AREYIKSARELGAS 58 (219)
T ss_dssp HHHHHHHHHHHH-HSEEEEEECCH-HH-HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcC-CCEEEEEECcc-hH-hcchHHHHHHcCCC
Confidence 455666667777 99999999874 34 355 56777764
No 322
>2xry_A Deoxyribodipyrimidine photolyase; DNA damage, DNA repair; HET: FAD; 1.50A {Methanosarcina mazei} PDB: 2xrz_A*
Probab=49.28 E-value=15 Score=26.30 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=33.4
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+..++.++=+.|++.|+++.+..+.+... ...++++++....+
T Consensus 90 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~-l~~l~~~~~~~~V~ 132 (482)
T 2xry_A 90 MLKGLQELEVSLSRKKIPSFFLRGDPGEK-ISRFVKDYNAGTLV 132 (482)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCHHHH-HHHHHHHcCCCEEE
Confidence 44666777788999999999999988777 48888888875543
No 323
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=49.28 E-value=42 Score=20.38 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=24.6
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+++
T Consensus 59 ~~~~~~lr~~~~~~~ii~lt~~~~~~~-~~~~~~~ga~~~l 98 (220)
T 1p2f_A 59 YEICRMIKETRPETWVILLTLLSDDES-VLKGFEAGADDYV 98 (220)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCCSHHH-HHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCCHHH-HHHHHHcCCCEEE
Confidence 4677777753 689999998776552 3334456665544
No 324
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=48.90 E-value=23 Score=24.06 Aligned_cols=29 Identities=14% Similarity=0.129 Sum_probs=24.6
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
.+.+.+.++.++++|.+++.+|+.....+
T Consensus 103 T~e~~~a~~~ak~~g~~~i~IT~~~~S~l 131 (334)
T 3hba_A 103 SPDILAQARMAKNAGAFCVALVNDETAPI 131 (334)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEESCTTSGG
T ss_pred CHHHHHHHHHHHHcCCcEEEEeCCCCChH
Confidence 36789999999999999999998775554
No 325
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=48.89 E-value=30 Score=18.64 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=24.1
Q ss_pred HHHHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ...+++++|+...... ....-..|...++
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 102 (124)
T 1srr_A 63 IEILKRMKVIDENIRVIIMTAYGELDM-IQESKELGALTHF 102 (124)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSCCHHH-HHHHHHHTCCCEE
T ss_pred HHHHHHHHHhCCCCCEEEEEccCchHH-HHHHHhcChHhhc
Confidence 466777765 3689999998775542 3334456665554
No 326
>1owl_A Photolyase, deoxyribodipyrimidine photolyase; DNA repair, flavin enzyme, photoreactivating enzyme; HET: FAD; 1.80A {Synechococcus elongatus} SCOP: a.99.1.1 c.28.1.1 PDB: 1owm_A* 1own_A* 1owo_A* 1owp_A* 1qnf_A* 1tez_A*
Probab=48.74 E-value=12 Score=26.79 Aligned_cols=43 Identities=9% Similarity=0.196 Sum_probs=33.4
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+..++.++=+.|++.|+++.+..+.+... ...+++.+++...+
T Consensus 55 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~-l~~l~~~~~~~~v~ 97 (484)
T 1owl_A 55 LQGCLQELQQRYQQAGSRLLLLQGDPQHL-IPQLAQQLQAEAVY 97 (484)
T ss_dssp HHHHHHHHHHHHHHHTSCEEEEESCHHHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHcCCCEEE
Confidence 44566667778899999999999988777 48888888875543
No 327
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=48.70 E-value=39 Score=22.88 Aligned_cols=71 Identities=15% Similarity=0.188 Sum_probs=49.3
Q ss_pred HHHHHHhhccCC--CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 9 NEALEIIGQFEN--LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 9 ~~~~~~~~~~~~--~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
.+++..++.... ..+.++.=+-|.+.. . ..+.+.+-+..+++.|++++|+-|.. +. ....++++
T Consensus 33 re~~~yi~~f~~~~~~~~iViK~GGsv~~------~------~~~~~~~dI~~l~~~G~~~VvVHGgG-~~-i~~~l~~~ 98 (307)
T 3zzh_A 33 REVEQYLKYFTSVSQQQFAVIKVGGAIIS------D------NLHELASCLAFLYHVGLYPIVLHGTG-PQ-VNGRLEAQ 98 (307)
T ss_dssp HHHHHHHHHHHCCCCSCCEEEEECHHHHH------H------SHHHHHHHHHHHHHBTCCEEEEECCH-HH-HHHHHHHT
T ss_pred hhHHHHHHHHhCCCCCCEEEEEEChHHhh------c------hHHHHHHHHHHHHHCCCCEEEEECCC-HH-HHHHHHHc
Confidence 345555554443 246678888888764 1 13566677778888999999988876 56 48899999
Q ss_pred CCCCccc
Q 034147 87 GIHSMFV 93 (103)
Q Consensus 87 ~l~~~~~ 93 (103)
|+..-|.
T Consensus 99 gi~~~~~ 105 (307)
T 3zzh_A 99 GIEPDYI 105 (307)
T ss_dssp TCCCCEE
T ss_pred CCCcccc
Confidence 9976554
No 328
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=48.67 E-value=67 Score=25.21 Aligned_cols=45 Identities=16% Similarity=0.174 Sum_probs=30.4
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
.+++.+|+|=. +...++.- ....+|+..+++++|+++|.++++.-
T Consensus 349 ~Dvi~lDidy~--~~~~dFt~---D~~~FPdp~~mv~~Lh~~G~k~vl~i 393 (898)
T 3lpp_A 349 FDTQVTDIDYM--EDKKDFTY---DQVAFNGLPQFVQDLHDHGQKYVIIL 393 (898)
T ss_dssp CCEEEECGGGS--STTCTTCC---CTTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred ceeeEeccccc--cCCCcceE---ChhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 47888898732 11111111 12467899999999999999998765
No 329
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=48.64 E-value=23 Score=21.70 Aligned_cols=44 Identities=25% Similarity=0.244 Sum_probs=30.0
Q ss_pred cCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 43 EDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 43 ~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++.....|-+..+..+|+++|+.+.|+.+.. +..+++--+-+.
T Consensus 15 CPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npA----AlkLlevaDPe~ 58 (157)
T 1kjn_A 15 CPESPVQIPLAIYTSHKLKKKGFRVTVTANPA----ALRLVQVADPEG 58 (157)
T ss_dssp CSCSTTHHHHHHHHHHHHHHTTCEEEEEECHH----HHHHHHHHSTTC
T ss_pred CCCCcchhhHHHHHHHHHHhcCCeeEEecCHH----HHhheeccCCCc
Confidence 34444455778889999999999999776533 455566554443
No 330
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=48.37 E-value=18 Score=24.71 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=20.8
Q ss_pred hhHHHHHHHHH-HCCCeEEEEeCCCc
Q 034147 51 PHAKGILEALK-EKGIHVAVASRSPA 75 (103)
Q Consensus 51 ~g~~~~l~~l~-~~G~~v~i~T~~~~ 75 (103)
+...+.|+++. ++|++|+++|....
T Consensus 255 ~~~~~~l~~a~~~~gi~VV~~Sr~~~ 280 (331)
T 1agx_A 255 NYLVPEVRKLHDEQGLQIVRSSRVAQ 280 (331)
T ss_dssp TTHHHHHHHHHHTTCCEEEEEESSCS
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCC
Confidence 77899999998 99999999885443
No 331
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=47.87 E-value=27 Score=26.35 Aligned_cols=39 Identities=8% Similarity=0.152 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCC-----chhHHHHHHHHcCCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSP-----APDIAKTFLHKLGIHS 90 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~-----~~~i~~~~l~~~~l~~ 90 (103)
.++.+++++.+++|+.+.+..+.. .+. +-..++.+|+..
T Consensus 347 ~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~-~~~~~~~~Gv~g 390 (641)
T 3a24_A 347 IDLKELVDYAASKNVGIILWAGYHAFERDMEN-VCRHYAEMGVKG 390 (641)
T ss_dssp CCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHH-HHHHHHHHTCCE
T ss_pred CCHHHHHHHHHhcCCEEEEEeeCcchHHHHHH-HHHHHHHcCCCE
Confidence 459999999999999999998554 233 345667777754
No 332
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=47.43 E-value=33 Score=18.61 Aligned_cols=38 Identities=16% Similarity=0.112 Sum_probs=24.4
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. +.+++++|+...... ....-+.|...|+
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~ga~~~l 102 (126)
T 1dbw_A 63 VELLRNLGDLKINIPSIVITGHGDVPM-AVEAMKAGAVDFI 102 (126)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTTCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCHHH-HHHHHHhCHHHhe
Confidence 4677777764 578999998776542 3334455665544
No 333
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=47.34 E-value=32 Score=18.39 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=24.4
Q ss_pred HHHHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ .+.+++++|+...... ....-+.|..+++
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 102 (120)
T 1tmy_A 63 IDAIKEIMKIDPNAKIIVCSAMGQQAM-VIEAIKAGAKDFI 102 (120)
T ss_dssp HHHHHHHHHHCTTCCEEEEECTTCHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHHhhCCCCeEEEEeCCCCHHH-HHHHHHhCcceeE
Confidence 467777765 3578999998876552 3444456665544
No 334
>3q3v_A Phosphoglycerate kinase; structural genomics, center for structural genomics of infec diseases, csgid, PGK; HET: PGE; 2.15A {Campylobacter jejuni subsp} SCOP: c.86.1.0
Probab=47.28 E-value=20 Score=25.47 Aligned_cols=25 Identities=24% Similarity=0.240 Sum_probs=20.7
Q ss_pred ChhHHHHHHHHHHCCCeEEEEe--CCC
Q 034147 50 YPHAKGILEALKEKGIHVAVAS--RSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T--~~~ 74 (103)
...+...|++|.++|.+++++| ||+
T Consensus 42 I~aalpTI~~ll~~GakVil~SHlGRP 68 (403)
T 3q3v_A 42 IRSAIPTIRYCLDNGCSVILASHLGRP 68 (403)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCCCC
Confidence 3567889999999999999999 544
No 335
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=47.07 E-value=25 Score=22.55 Aligned_cols=35 Identities=11% Similarity=0.147 Sum_probs=26.4
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-+....+ +. +..+|.+.
T Consensus 186 ~~~v~~~~~~G~~v~~WTVn~~~~~-~~-l~~~GVdg 220 (238)
T 3no3_A 186 PDWVKDCKVLGMTSNVWTVDDPKLM-EE-MIDMGVDF 220 (238)
T ss_dssp TTHHHHHHHTTCEEEEECCCSHHHH-HH-HHHHTCSE
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHH-HH-HHHcCCCE
Confidence 3588999999999999998876653 44 55677643
No 336
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=47.01 E-value=38 Score=20.44 Aligned_cols=35 Identities=17% Similarity=0.150 Sum_probs=26.4
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
+...++.++++++|+.++.+|..+... ...+++++
T Consensus 51 ~~l~~~~~~~~~~~v~vv~Is~d~~~~-~~~~~~~~ 85 (186)
T 1n8j_A 51 GDVADHYEELQKLGVDVYSVSTDTHFT-HKAWHSSS 85 (186)
T ss_dssp HHHHHHHHHHHHTTEEEEEEESSCHHH-HHHHHHHC
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHH-HHHHHHHc
Confidence 556667777788899999999777666 47777777
No 337
>1np7_A DNA photolyase; protein with FAD cofactor; HET: DNA FAD; 1.90A {Synechocystis SP} SCOP: a.99.1.1 c.28.1.1
Probab=46.98 E-value=11 Score=26.95 Aligned_cols=43 Identities=14% Similarity=0.309 Sum_probs=32.8
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+..++.++=+.|++.|+++.+..+.+... ...+++.++....+
T Consensus 63 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~-l~~l~~~~~~~~V~ 105 (489)
T 1np7_A 63 LQQSVQNLAESLQKVGNKLLVTTGLPEQV-IPQIAKQINAKTIY 105 (489)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCcEEEEECCHHHH-HHHHHHHcCCCEEE
Confidence 34556666678899999999999988776 48888888875433
No 338
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=46.78 E-value=35 Score=18.77 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=24.2
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-+.|...++
T Consensus 65 ~~~~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~ga~~~l 104 (133)
T 3b2n_A 65 LEVLAEIRKKHLNIKVIIVTTFKRPGY-FEKAVVNDVDAYV 104 (133)
T ss_dssp HHHHHHHHHTTCSCEEEEEESCCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCCCCcEEEEecCCCHHH-HHHHHHcCCcEEE
Confidence 5677787764 588999998776543 3333446665543
No 339
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=46.59 E-value=22 Score=24.47 Aligned_cols=28 Identities=11% Similarity=0.173 Sum_probs=24.6
Q ss_pred hhHHHHHHHHHHCC-CeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKG-IHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G-~~v~i~T~~~~~~i 78 (103)
+.+.+.++.++++| .+++.+|+.....+
T Consensus 115 ~e~l~al~~ak~~G~a~~iaIT~~~~S~L 143 (372)
T 3tbf_A 115 ADTLESLRKSKKQNYVGSMCICNVPNSSL 143 (372)
T ss_dssp HHHHHHHHHHTTTTEEEEEEEESSSSSHH
T ss_pred HHHHHHHHHHHHcCCceEEEEcCCCCChH
Confidence 78899999999999 99999998886664
No 340
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=46.53 E-value=24 Score=24.23 Aligned_cols=24 Identities=38% Similarity=0.562 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
+...+.|+++.++|++|+++|...
T Consensus 261 ~~~~~~l~~a~~~Gi~VV~~Src~ 284 (334)
T 3nxk_A 261 KNQKDVLKELLKKGLKVVVSSRVV 284 (334)
T ss_dssp HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred HHHHHHHHHHHHCCCEEEEeCCCC
Confidence 678889999999999999998544
No 341
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=46.03 E-value=49 Score=21.43 Aligned_cols=64 Identities=8% Similarity=-0.080 Sum_probs=35.4
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.+.++.-+-|..+.... ...........+.+-+..++ .|++++|++|+.... ....++++++..
T Consensus 24 ~k~iVIKiGGs~l~~~~---~~~~~~~~i~~~a~~i~~l~-~g~~vVlVhGgG~~~-~~~~~~~~g~~~ 87 (256)
T 2va1_A 24 KQRIVIKISGACLKQND---SSIIDFIKINDLAEQIEKIS-KKYIVSIVLGGGNIW-RGSIAKELDMDR 87 (256)
T ss_dssp CSEEEEEECGGGGCSST---TCSSCHHHHHHHHHHHHHHT-TTSEEEEEECCTTTC-CHHHHHHTTCCH
T ss_pred cCEEEEEechhhccCCC---CCCCCHHHHHHHHHHHHHHh-CCCEEEEEECCcHHh-ccchHHHcCCCC
Confidence 45688899998885210 00001112234445555566 899999999755332 122256677653
No 342
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=45.99 E-value=29 Score=24.93 Aligned_cols=71 Identities=20% Similarity=0.208 Sum_probs=49.5
Q ss_pred HHHHHHhhccCC--CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 9 NEALEIIGQFEN--LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 9 ~~~~~~~~~~~~--~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
.+++..++.... ..+.++.=+.|++.+. ..+.+.+-+..+++.|++++|+=|.. +. ....++++
T Consensus 43 re~~pyi~~f~~~~~~~~iViK~GGsv~~~------------~l~~~a~dI~~l~~~G~~~VvVHGgG-~~-i~~~l~~~ 108 (460)
T 3s6g_A 43 KEIREYLHRFSGIDQERFAVIKVGGAVIQD------------DLPGLASALAFLQTVGLTPVVVHGGG-PQ-LDAALEAA 108 (460)
T ss_dssp HHHHHHHHHTSSSCGGGSEEEEECHHHHHH------------CHHHHHHHHHHHHHHTCCCEEEECCH-HH-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCEEEEEEChHHhhh------------HHHHHHHHHHHHHHCCCcEEEEECCC-hH-HHHHHHHc
Confidence 445556665543 2367888999997741 12566777777888999988888775 56 48889999
Q ss_pred CCCCccc
Q 034147 87 GIHSMFV 93 (103)
Q Consensus 87 ~l~~~~~ 93 (103)
++..-|.
T Consensus 109 gi~~~f~ 115 (460)
T 3s6g_A 109 DIPTERV 115 (460)
T ss_dssp SCCCCCC
T ss_pred CCCcccc
Confidence 9876553
No 343
>1php_A 3-phosphoglycerate kinase; HET: ADP; 1.65A {Geobacillus stearothermophilus} SCOP: c.86.1.1 PDB: 3b2b_A* 3uwd_A*
Probab=45.86 E-value=18 Score=25.64 Aligned_cols=25 Identities=32% Similarity=0.329 Sum_probs=20.8
Q ss_pred ChhHHHHHHHHHHCCCeEEEEe--CCC
Q 034147 50 YPHAKGILEALKEKGIHVAVAS--RSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T--~~~ 74 (103)
...+...|++|-++|.+++++| ||+
T Consensus 37 I~aalpTI~~ll~~gakvil~SHlGRP 63 (394)
T 1php_A 37 IRAALPTIRYLIEHGAKVILASHLGRP 63 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCCCC
Confidence 3567889999999999999999 554
No 344
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=45.62 E-value=18 Score=25.59 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=21.1
Q ss_pred ChhHHHHHHHHHHCCCeEEEEe--CCC
Q 034147 50 YPHAKGILEALKEKGIHVAVAS--RSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T--~~~ 74 (103)
...+...|++|-++|.+++++| ||+
T Consensus 37 I~aalpTI~~ll~~gakvil~SHlGRP 63 (387)
T 1zmr_A 37 IRASLPTIELALKQGAKVMVTSHLGRP 63 (387)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEccCCCC
Confidence 3567889999999999999999 555
No 345
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=45.59 E-value=40 Score=20.75 Aligned_cols=36 Identities=11% Similarity=0.194 Sum_probs=28.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+.+.++++.+.|..++++..+-... +..++.+.|+.
T Consensus 67 l~~~v~kI~~~g~nVVl~~k~I~d~-a~~~l~k~gI~ 102 (178)
T 1gml_A 67 IHQLCEDIIQLKPDVVITEKGISDL-AQHYLMRANVT 102 (178)
T ss_dssp HHHHHHHHHTTCCSEEEESSCBCHH-HHHHHHHTTCE
T ss_pred HHHHHHHHhhcCCcEEEECCcccHH-HHHHHHHCCCE
Confidence 4667788899999988887777665 89999988874
No 346
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=45.59 E-value=33 Score=24.23 Aligned_cols=23 Identities=13% Similarity=0.442 Sum_probs=20.3
Q ss_pred cCh-hHHHHHHHHHHCCCeEEEEe
Q 034147 49 LYP-HAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 49 ~~~-g~~~~l~~l~~~G~~v~i~T 71 (103)
.|| |+..+.++++++|.+++|-+
T Consensus 81 kFP~Gl~~l~~~ih~~Glk~Giw~ 104 (404)
T 3hg3_A 81 RFPHGIRQLANYVHSKGLKLGIYA 104 (404)
T ss_dssp TSTTHHHHHHHHHHHTTCEEEEEE
T ss_pred hcCCCHHHHHHHHHHCCCeeEEEe
Confidence 445 69999999999999999987
No 347
>2pfu_A Biopolymer transport EXBD protein; TONB system, proton motive force, periplasmic domain; NMR {Escherichia coli}
Probab=45.54 E-value=13 Score=20.22 Aligned_cols=12 Identities=8% Similarity=0.263 Sum_probs=8.8
Q ss_pred ceEEEeCCCCcc
Q 034147 23 RLVVFDLDYTLW 34 (103)
Q Consensus 23 ~~~~fD~DGTL~ 34 (103)
-.+..|-||.++
T Consensus 22 i~i~I~~dg~i~ 33 (99)
T 2pfu_A 22 VYLSVKADNSMF 33 (99)
T ss_dssp CEEEEETTTEEE
T ss_pred EEEEEeCCCCEE
Confidence 346778899876
No 348
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=45.50 E-value=38 Score=21.80 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=26.7
Q ss_pred HHHHHHHHHCCCeEEEEeC----CCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASR----SPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~----~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|- +....+ +. +..+|.+.
T Consensus 202 ~~~v~~~~~~G~~v~~wTv~~~~n~~~~~-~~-l~~~Gvdg 240 (258)
T 2o55_A 202 KEQVCTAHEKGLSVTVWMPWIFDDSEEDW-KK-CLELQVDL 240 (258)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCCCHHHH-HH-HHHHTCSE
T ss_pred HHHHHHHHHCCCEEEEeeCCCCCCCHHHH-HH-HHHcCCCE
Confidence 6788999999999999998 776552 44 55667643
No 349
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=45.44 E-value=46 Score=21.47 Aligned_cols=55 Identities=9% Similarity=0.031 Sum_probs=35.0
Q ss_pred eEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCC-CeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 24 LVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKG-IHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 24 ~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G-~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++.-+-|+.+.. ......+.+.+..+++.| .+++|+++.. .. +...++.++...
T Consensus 4 ~~ViK~GGs~l~~----------~~~~~~~~~~i~~l~~~g~~~vVvV~Ggg-~~-~~~ll~~~g~~~ 59 (258)
T 1gs5_A 4 PLIIKLGGVLLDS----------EEALERLFSALVNYRESHQRPLVIVHGGG-CV-VDELMKGLNLPV 59 (258)
T ss_dssp CEEEEECGGGGGC----------HHHHHHHHHHHHHHHTTCCSCEEEEECCH-HH-HHHHHHHHTCCC
T ss_pred cEEEEEChhHhCC----------hHHHHHHHHHHHHHHHcCCCeEEEEeCCc-HH-HHHHHHHcCCCc
Confidence 3677788887751 112334455555555554 4689999888 45 488888888754
No 350
>1v6s_A Phosphoglycerate kinase; riken structu genomics/proteomics initiative, RSGI, structural genomics, transferase; 1.50A {Thermus thermophilus} SCOP: c.86.1.1 PDB: 2ie8_A
Probab=45.27 E-value=18 Score=25.53 Aligned_cols=25 Identities=20% Similarity=0.206 Sum_probs=20.8
Q ss_pred ChhHHHHHHHHHHCCCeEEEEe--CCC
Q 034147 50 YPHAKGILEALKEKGIHVAVAS--RSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T--~~~ 74 (103)
...+...|++|-++|.+++++| ||+
T Consensus 35 I~aalpTI~~ll~~gakvil~SHlGRP 61 (390)
T 1v6s_A 35 ILESLPTLRHLLAGGASLVLLSHLGRP 61 (390)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCC
Confidence 3567889999999999999999 544
No 351
>1vpe_A Phosphoglycerate kinase; transferase, hyperthermostability, crystal, AMP-PNP, 3-PGA; HET: ANP 3PG; 2.00A {Thermotoga maritima} SCOP: c.86.1.1
Probab=45.18 E-value=18 Score=25.59 Aligned_cols=25 Identities=24% Similarity=0.235 Sum_probs=20.8
Q ss_pred ChhHHHHHHHHHHCCCeEEEEe--CCC
Q 034147 50 YPHAKGILEALKEKGIHVAVAS--RSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T--~~~ 74 (103)
...+...|++|-++|.+++++| |++
T Consensus 36 I~a~lpTI~~ll~~gakvil~SHlGRP 62 (398)
T 1vpe_A 36 IRAALPTIKYALEQGAKVILLSHLGRP 62 (398)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEccCCCC
Confidence 3567889999999999999999 554
No 352
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=45.17 E-value=50 Score=20.04 Aligned_cols=40 Identities=15% Similarity=0.158 Sum_probs=26.5
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchh
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPD 77 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~ 77 (103)
.++++++|++-- + .+| .++++++++. +.+++++|+.....
T Consensus 46 ~~dlvllD~~l~--~--------------~~g-~~~~~~lr~~~~~~~ii~ls~~~~~~ 87 (225)
T 1kgs_A 46 PFDVVILDIMLP--V--------------HDG-WEILKSMRESGVNTPVLMLTALSDVE 87 (225)
T ss_dssp CCSEEEEESCCS--S--------------SCH-HHHHHHHHHTTCCCCEEEEESSCHHH
T ss_pred CCCEEEEeCCCC--C--------------CCH-HHHHHHHHhcCCCCCEEEEeCCCCHH
Confidence 478888887421 1 123 5677788764 58899999877543
No 353
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=45.03 E-value=93 Score=24.35 Aligned_cols=58 Identities=12% Similarity=0.159 Sum_probs=35.3
Q ss_pred HHHHHHhhccCC---CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 9 NEALEIIGQFEN---LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 9 ~~~~~~~~~~~~---~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
+++++++..... ..+++.+|+|=. +...++.- ....+|+..+++++|+++|.++++.-
T Consensus 305 ~ev~~vv~~~r~~~IP~Dvi~lDidy~--~~~~dFt~---D~~~FPdp~~mv~~Lh~~G~k~v~~i 365 (875)
T 3l4y_A 305 DNMREVVERNRAAQLPYDVQHADIDYM--DERRDFTY---DSVDFKGFPEFVNELHNNGQKLVIIV 365 (875)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECGGGS--BTTBTTCC---CTTTTTTHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCceEEEccchh--cCCCceee---ChhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 344444443332 248889998732 11111111 12367889999999999999998753
No 354
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=44.54 E-value=21 Score=25.54 Aligned_cols=22 Identities=23% Similarity=0.299 Sum_probs=19.7
Q ss_pred hhHHHHHHHHHHCCCeEEEEeC
Q 034147 51 PHAKGILEALKEKGIHVAVASR 72 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~ 72 (103)
+...+.|+++.++|++|+++|.
T Consensus 344 ~~~~~~l~~a~~~Gi~VV~~Sq 365 (438)
T 1zq1_A 344 NDIIPSIERAVEEGVAVCMTSQ 365 (438)
T ss_dssp GGGHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHHCCCEEEEeCC
Confidence 7788999999999999999994
No 355
>4fey_A Phosphoglycerate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: ADP; 2.30A {Francisella tularensis subsp} PDB: 4ehj_A
Probab=44.52 E-value=22 Score=25.14 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEe--CCC
Q 034147 51 PHAKGILEALKEKGIHVAVAS--RSP 74 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T--~~~ 74 (103)
..+...|++|.++|.+++++| ||+
T Consensus 41 ~a~lpTI~~ll~~gakVil~SHlGRP 66 (395)
T 4fey_A 41 EAAIPTIQYILDQGGAVILMSHLGRP 66 (395)
T ss_dssp HHTHHHHHHHHHHTCEEEEECCCSCC
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCC
Confidence 456778999999999999999 555
No 356
>2j4d_A Cryptochrome 3, cryptochrome DASH; DNA-binding protein, flavoprotein, FAD, mitochondrion, plastid, chromophore, chloroplast; HET: FAD MHF; 1.9A {Arabidopsis thaliana} PDB: 2vtb_A* 2ijg_X* 2vtb_B*
Probab=44.49 E-value=14 Score=26.85 Aligned_cols=43 Identities=16% Similarity=0.355 Sum_probs=33.3
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
++.++.++=+.|++.|+++.+..+.+... ...+++++++...+
T Consensus 98 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~-l~~l~~~~~~~~V~ 140 (525)
T 2j4d_A 98 LMECLVDLRKNLMKRGLNLLIRSGKPEEI-LPSLAKDFGARTVF 140 (525)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHH-HHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHHHHcCCCEEE
Confidence 34556666678899999999999988777 48888888876543
No 357
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=44.23 E-value=37 Score=18.31 Aligned_cols=63 Identities=13% Similarity=0.224 Sum_probs=36.9
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH-CCCeEEEEeCCCchhHHHHHHHHcCC
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~-~G~~v~i~T~~~~~~i~~~~l~~~~l 88 (103)
++++.+.. ..++++++|+.-- + .. -.++++++++ .+.+++++|+...... ....-..|.
T Consensus 37 ~al~~~~~--~~~dlii~D~~~p--~--------------~~-g~~~~~~lr~~~~~~ii~~t~~~~~~~-~~~~~~~ga 96 (120)
T 3f6p_A 37 EAVEMVEE--LQPDLILLDIMLP--N--------------KD-GVEVCREVRKKYDMPIIMLTAKDSEID-KVIGLEIGA 96 (120)
T ss_dssp HHHHHHHT--TCCSEEEEETTST--T--------------TH-HHHHHHHHHTTCCSCEEEEEESSCHHH-HHHHHHTTC
T ss_pred HHHHHHhh--CCCCEEEEeCCCC--C--------------CC-HHHHHHHHHhcCCCCEEEEECCCChHH-HHHHHhCCc
Confidence 34444443 3478888887421 1 12 3567777765 3578999998776552 444456676
Q ss_pred CCcc
Q 034147 89 HSMF 92 (103)
Q Consensus 89 ~~~~ 92 (103)
.+|+
T Consensus 97 ~~~l 100 (120)
T 3f6p_A 97 DDYV 100 (120)
T ss_dssp CEEE
T ss_pred ceeE
Confidence 5554
No 358
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=44.16 E-value=32 Score=22.91 Aligned_cols=35 Identities=14% Similarity=0.299 Sum_probs=26.9
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|=+....+ +. +..+|.+.
T Consensus 258 ~~~v~~~~~~Gl~V~~WTVn~~~~~-~~-l~~~GVDg 292 (313)
T 3l12_A 258 PELVAEAHDLGLIVLTWTVNEPEDI-RR-MATTGVDG 292 (313)
T ss_dssp HHHHHHHHHTTCEEEEBCCCSHHHH-HH-HHHHTCSE
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHH-HH-HHHcCCCE
Confidence 6789999999999999997775553 44 55677643
No 359
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=43.73 E-value=40 Score=20.62 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHCCCe-EEEEeCCCchhHHHHHHHHcCC
Q 034147 51 PHAKGILEALKEKGIH-VAVASRSPAPDIAKTFLHKLGI 88 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~-v~i~T~~~~~~i~~~~l~~~~l 88 (103)
++..+...+++++|+. ++.+|..+... -..+.+..++
T Consensus 63 ~~f~~~~~ef~~~gv~~VigIS~D~~~~-~~~w~~~~~~ 100 (171)
T 2xhf_A 63 PEYLSLYDKFKEEGYHTIACIAVNDPFV-MAAWGKTVDP 100 (171)
T ss_dssp HHHHHTHHHHHHTTCCEEEEEESSCHHH-HHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCHHH-HHHHHHhcCC
Confidence 5667788889999996 88888888666 3777787776
No 360
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=43.43 E-value=24 Score=19.00 Aligned_cols=38 Identities=16% Similarity=0.110 Sum_probs=20.3
Q ss_pred HHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-+.|..+++
T Consensus 61 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 102 (124)
T 1mb3_A 61 LEVTKWLKEDDDLAHIPVVAVTAFAMKGD-EERIREGGCEAYI 102 (124)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEC------C-HHHHHHHTCSEEE
T ss_pred HHHHHHHHcCccccCCcEEEEECCCCHHH-HHHHHhCCCCEEE
Confidence 4678888763 578999997664442 3333455665544
No 361
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=43.29 E-value=20 Score=25.51 Aligned_cols=25 Identities=20% Similarity=0.183 Sum_probs=20.8
Q ss_pred ChhHHHHHHHHHHCCCeEEEEe--CCC
Q 034147 50 YPHAKGILEALKEKGIHVAVAS--RSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T--~~~ 74 (103)
...+...|++|-++|.+++++| ||+
T Consensus 36 I~aalpTI~~ll~~Gakvil~SHlGRP 62 (415)
T 16pk_A 36 IRSALPTLKKVLTEGGSCVLMSHLGRP 62 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCCCC
Confidence 3567889999999999999999 544
No 362
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=43.04 E-value=53 Score=23.66 Aligned_cols=58 Identities=16% Similarity=0.179 Sum_probs=42.4
Q ss_pred ceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcccc
Q 034147 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMFVP 94 (103)
Q Consensus 23 ~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~~~ 94 (103)
+.++.=+.|.+.. . ..+.+.+-+..|++.|++++|+-|.. +. ....++++|+...|..
T Consensus 49 ~~iVIK~GGsv~~------~------~l~~la~dI~~l~~~G~~~VvVHGgG-~~-i~~~l~~~gi~~~f~~ 106 (464)
T 4ab7_A 49 QFAVIKVGGAIIS------D------NLHELASCLAFLYHVGLYPIVLHGTG-PQ-VNGRLEAQGIEPDYID 106 (464)
T ss_dssp CCEEEEECHHHHH------H------CHHHHHHHHHHHHHTTCCCEEEECCC-HH-HHHHHHHTTCCCCEET
T ss_pred ceEEEEECHHHhh------c------hHHHHHHHHHHHHHCCCeEEEEECCc-HH-HHHHHHHcCCCccccC
Confidence 5577778887663 1 12456667778888999999999887 56 4889999999765543
No 363
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=42.93 E-value=45 Score=18.84 Aligned_cols=49 Identities=22% Similarity=0.263 Sum_probs=29.3
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchh
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPD 77 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~ 77 (103)
++++.+.. ..++++++|++-. + .+ -.++++.+++. ..+++++|+.....
T Consensus 42 ~a~~~l~~--~~~dlvi~d~~l~--~--------------~~-g~~~~~~l~~~~~~~~ii~ls~~~~~~ 92 (154)
T 2rjn_A 42 DALEALKG--TSVQLVISDMRMP--E--------------MG-GEVFLEQVAKSYPDIERVVISGYADAQ 92 (154)
T ss_dssp HHHHHHTT--SCCSEEEEESSCS--S--------------SC-HHHHHHHHHHHCTTSEEEEEECGGGHH
T ss_pred HHHHHHhc--CCCCEEEEecCCC--C--------------CC-HHHHHHHHHHhCCCCcEEEEecCCCHH
Confidence 34444443 2478888887421 1 12 24667777653 58999999877544
No 364
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=42.91 E-value=28 Score=23.71 Aligned_cols=61 Identities=23% Similarity=0.403 Sum_probs=36.9
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCe----EEEEeCCC---chhHHHHHHHHcCCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIH----VAVASRSP---APDIAKTFLHKLGIHS 90 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~----v~i~T~~~---~~~i~~~~l~~~~l~~ 90 (103)
+.+++||+|. +-+ .......+.|....+-+.+++.|+. |+|--... ... +--.|+.+|.++
T Consensus 74 PGAv~~Dld~-~~d------~~~~~ph~LP~~~~f~~~l~~lGI~~d~~VVvYD~~~~~~AaR-~wW~Lr~~Gh~~ 141 (327)
T 3utn_X 74 PNSIFFDIDA-ISD------KKSPYPHMFPTKKVFDDAMSNLGVQKDDILVVYDRVGNFSSPR-CAWTLGVMGHPK 141 (327)
T ss_dssp TTCEECCTTT-SSC------TTSSSTTCCCCHHHHHHHHHHTTCCTTCEEEEECSSSSSSHHH-HHHHHHHTTCSE
T ss_pred CCCeeeChHH-hcC------CCCCCCCCCcCHHHHHHHHHHcCCCCCCEEEEEeCCCCcHHHH-HHHHHHHcCCCc
Confidence 5667888874 333 2334456778888888889988865 55544322 122 234567777654
No 365
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=42.59 E-value=22 Score=24.45 Aligned_cols=23 Identities=17% Similarity=0.315 Sum_probs=20.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRS 73 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~ 73 (103)
+...+.|+++.++|++++++|..
T Consensus 261 ~~~~~~l~~a~~~Gi~VV~~Sr~ 283 (337)
T 4pga_A 261 SRVVPALQQLRKNGTQIIRSSHV 283 (337)
T ss_dssp TTTHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHHHHCCCEEEEeccC
Confidence 57889999999999999999866
No 366
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=42.47 E-value=43 Score=18.56 Aligned_cols=38 Identities=3% Similarity=-0.088 Sum_probs=24.1
Q ss_pred HHHHHHHHHC-CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~-G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+|+
T Consensus 64 ~~l~~~l~~~~~~~ii~ls~~~~~~~-~~~~~~~ga~~~l 102 (136)
T 2qzj_A 64 WTLCKKIRNVTTCPIVYMTYINEDQS-ILNALNSGGDDYL 102 (136)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCCHHH-HHHHHHTTCCEEE
T ss_pred HHHHHHHccCCCCCEEEEEcCCCHHH-HHHHHHcCCcEEE
Confidence 5677888764 578999998775542 3334455665544
No 367
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=42.44 E-value=45 Score=18.77 Aligned_cols=38 Identities=18% Similarity=0.114 Sum_probs=20.1
Q ss_pred HHHHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ .+.+++++|+...... ....-..|...++
T Consensus 66 ~~~~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~g~~~~l 105 (154)
T 2qsj_A 66 IDGLVRLKRFDPSNAVALISGETDHEL-IRAALEAGADGFI 105 (154)
T ss_dssp HHHHHHHHHHCTTSEEEEC-----CHH-HHHHHHTTCCBBC
T ss_pred HHHHHHHHHhCCCCeEEEEeCCCCHHH-HHHHHHccCCEEE
Confidence 456666665 3589999998775552 3444556766554
No 368
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=42.11 E-value=40 Score=24.82 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHHCC-CeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEKG-IHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~G-~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++| .+++.+|+.....+
T Consensus 353 ~e~l~a~~~ak~~G~a~~IaIT~~~~S~L 381 (608)
T 2bpl_A 353 ADTLAGLRLSKELGYLGSLAICNVPGSSL 381 (608)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESSTTCHH
T ss_pred HHHHHHHHHHHHcCCCeEEEEECCCCCHH
Confidence 78899999999999 99999999876664
No 369
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=41.84 E-value=22 Score=25.46 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=19.7
Q ss_pred hhHHHHHHHHHHCCCeEEEEeC
Q 034147 51 PHAKGILEALKEKGIHVAVASR 72 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~ 72 (103)
+...+.|+++.++|++|+++|.
T Consensus 341 ~~~~~~l~~a~~~Gi~VV~~Sq 362 (435)
T 2d6f_A 341 DTLIPVIGEAHDMGVPVAMTSQ 362 (435)
T ss_dssp GGGHHHHHHHHHTTCCEEEEET
T ss_pred HHHHHHHHHHHhCCCEEEEeCC
Confidence 7788899999999999999994
No 370
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=41.76 E-value=15 Score=20.59 Aligned_cols=48 Identities=29% Similarity=0.398 Sum_probs=25.2
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH----CCCeEEEEeCCCch
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE----KGIHVAVASRSPAP 76 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~----~G~~v~i~T~~~~~ 76 (103)
++++.+.. ..++++++|++-. + ..-.++++++++ .+.+++++|+....
T Consensus 37 ~a~~~~~~--~~~dlvi~D~~l~--~---------------~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~ 88 (140)
T 3n53_A 37 EALEQIDH--HHPDLVILDMDII--G---------------ENSPNLCLKLKRSKGLKNVPLILLFSSEHK 88 (140)
T ss_dssp HHHHHHHH--HCCSEEEEETTC-----------------------CHHHHHHTSTTCTTCCEEEEECC---
T ss_pred HHHHHHhc--CCCCEEEEeCCCC--C---------------CcHHHHHHHHHcCcccCCCCEEEEecCCCH
Confidence 34444433 2478888887521 1 112456666665 45889999987643
No 371
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=41.69 E-value=65 Score=20.38 Aligned_cols=37 Identities=11% Similarity=0.174 Sum_probs=23.9
Q ss_pred HHHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 55 GILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 55 ~~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
++++++++ ...+++++|+..... .....-..|..+++
T Consensus 190 ~l~~~ir~~~~~~piI~lt~~~~~~-~~~~~~~~G~~~~l 228 (254)
T 2ayx_A 190 RLTQRIRQLGLTLPVIGVTANALAE-EKQRCLESGMDSCL 228 (254)
T ss_dssp HHHHHHHHHHCCSCEEEEESSTTSH-HHHHHHHCCCEEEE
T ss_pred HHHHHHHhcCCCCcEEEEECCCCHH-HHHHHHHcCCceEE
Confidence 45555554 368999999887655 35555667766554
No 372
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=41.62 E-value=33 Score=22.10 Aligned_cols=59 Identities=17% Similarity=0.050 Sum_probs=36.6
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHH---HHHHcCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKT---FLHKLGIH 89 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~---~l~~~~l~ 89 (103)
.+.++.-+=|..+.. .. ........+.+.+..+++ |++++|++|+. .. +.. .+++++++
T Consensus 19 ~k~iViKlGGs~l~~-----~~-~~~~~i~~~~~~i~~l~~-g~~vViV~GgG-~~-~~~~~~~~~~~gl~ 80 (244)
T 2brx_A 19 HMRIVFDIGGSVLVP-----EN-PDIDFIKEIAYQLTKVSE-DHEVAVVVGGG-KL-ARKYIEVAEKFNSS 80 (244)
T ss_dssp CCEEEEEECHHHHCS-----SS-CCHHHHHHHHHHHHHHHH-HSEEEEEECCH-HH-HHHHHHHHHTTTCC
T ss_pred ccEEEEEechhhcCC-----CC-CCHHHHHHHHHHHHHHhC-CCeEEEEECcc-HH-HhchHHHHHHcCCC
Confidence 456888888887752 11 111223445666777777 99999999875 23 344 45667664
No 373
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=41.45 E-value=54 Score=19.38 Aligned_cols=38 Identities=11% Similarity=0.089 Sum_probs=24.9
Q ss_pred HHHHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ .+.+++++|+...... ....-..|..+|+
T Consensus 67 ~~~~~~l~~~~~~~~ii~lt~~~~~~~-~~~a~~~Ga~~~l 106 (184)
T 3rqi_A 67 LSLIAPLCDLQPDARILVLTGYASIAT-AVQAVKDGADNYL 106 (184)
T ss_dssp HHHHHHHHHHCTTCEEEEEESSCCHHH-HHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCHHH-HHHHHHhCHHHhe
Confidence 456666665 3589999998886653 4444566766554
No 374
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=41.44 E-value=21 Score=22.61 Aligned_cols=54 Identities=11% Similarity=0.091 Sum_probs=32.5
Q ss_pred ccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 17 QFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 17 ~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
|..++.-+++.|+=.-+++....+ .......+.+.+..+++..++.|++++.+.
T Consensus 2 M~~~~tALlvID~Q~~f~~~~~~~-~~~~~~~~i~~i~~Ll~~ar~~g~pVi~t~ 55 (211)
T 3oqp_A 2 MTTPRRALIVIDVQNEYVTGDLPI-EYPDVQSSLANIARAMDAARAAGVPVVIVQ 55 (211)
T ss_dssp CCCCCEEEEEECCBGGGTTSSSCC-CBSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCCCEEEEEEcCCHhhcCCcccc-CCcCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 444445667889876666421000 001122345677889999999999988765
No 375
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=41.42 E-value=1e+02 Score=23.82 Aligned_cols=24 Identities=13% Similarity=0.436 Sum_probs=20.5
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEe
Q 034147 48 YLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
..+|...+++++|+++|.++++.-
T Consensus 319 ~~FPdp~~mv~~Lh~~G~k~vl~i 342 (817)
T 4ba0_A 319 ENFPTPLDMMADFKQQGVKTVLIT 342 (817)
T ss_dssp TTCSCHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEe
Confidence 457788999999999999998764
No 376
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=40.53 E-value=56 Score=19.26 Aligned_cols=15 Identities=27% Similarity=0.654 Sum_probs=12.1
Q ss_pred CCceEEEeCCCCccc
Q 034147 21 LPRLVVFDLDYTLWP 35 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~ 35 (103)
-|.+++||-||.++.
T Consensus 104 ~Pt~~~~d~~G~~~~ 118 (164)
T 1sen_A 104 IPRILFLDPSGKVHP 118 (164)
T ss_dssp SSEEEEECTTSCBCT
T ss_pred CCeEEEECCCCCEEE
Confidence 356788999999885
No 377
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=40.46 E-value=51 Score=20.15 Aligned_cols=33 Identities=12% Similarity=0.183 Sum_probs=25.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcC
Q 034147 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
+..+++..++.|..+-++|+.+.+- .++++.||
T Consensus 122 ve~L~e~~~~~G~~v~ivs~~~eeG--~ql~~~fG 154 (166)
T 3ir9_A 122 VDEFSELADKSNAKVVFVSTDFDEG--SQLMNAFG 154 (166)
T ss_dssp HHHHHHHHHHTTCEEEEECSCSHHH--HHHHHTST
T ss_pred HHHHHHHHHhcCCEEEEECCCChhH--HHHHHcCC
Confidence 5578899999999999999998543 45557665
No 378
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=40.39 E-value=45 Score=18.20 Aligned_cols=38 Identities=11% Similarity=0.107 Sum_probs=23.4
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+++
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 102 (136)
T 1mvo_A 63 IEVCKQLRQQKLMFPILMLTAKDEEFD-KVLGLELGADDYM 102 (136)
T ss_dssp HHHHHHHHHTTCCCCEEEEECTTCCCC-HHHHHHTTCCEEE
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHhCCCCEEE
Confidence 4677777764 578888887665442 3334456665544
No 379
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=40.31 E-value=66 Score=20.07 Aligned_cols=54 Identities=17% Similarity=0.166 Sum_probs=33.0
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++|+.-- + ..-.++++++++. ..+++++|+...... ....-..|..+|+
T Consensus 67 ~~dlvllD~~lp--~---------------~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~-~~~~~~~Ga~~yl 122 (250)
T 3r0j_A 67 RPDAVILDVXMP--G---------------MDGFGVLRRLRADGIDAPALFLTARDSLQD-KIAGLTLGGDDYV 122 (250)
T ss_dssp CCSEEEEESCCS--S---------------SCHHHHHHHHHHTTCCCCEEEEECSTTHHH-HHHHHTSTTCEEE
T ss_pred CCCEEEEeCCCC--C---------------CCHHHHHHHHHhcCCCCCEEEEECCCCHHH-HHHHHHcCCcEEE
Confidence 478888887411 1 1236788888875 478999998875542 3333445555443
No 380
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=40.29 E-value=46 Score=18.24 Aligned_cols=38 Identities=13% Similarity=0.235 Sum_probs=24.0
Q ss_pred HHHHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ .+.+++++|+...... ....-+.|..+++
T Consensus 63 ~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~ga~~~l 102 (132)
T 3crn_A 63 TELLEKAHKLRPGMKKIMVTGYASLEN-SVFSLNAGADAYI 102 (132)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhhCCCCcEEEEeccccHHH-HHHHHhccchhhc
Confidence 466777765 3589999998875552 3334456665554
No 381
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=40.26 E-value=27 Score=25.13 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=50.8
Q ss_pred hHHHHHHhhccCC--CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH
Q 034147 8 KNEALEIIGQFEN--LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 8 ~~~~~~~~~~~~~--~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~ 85 (103)
..+++..++.... ..+.++.=+.|++.+. ..+.+.+-+..+++.|++++|+=|.. +. ....+++
T Consensus 45 ~re~~pyi~~f~~~~~~~~iViK~GG~v~~~------------~l~~va~dI~~l~~~G~~~VvVHGgg-~~-i~~~l~~ 110 (467)
T 3s6k_A 45 AKEISQYLKRFSQLDAKRFAVVKVGGAVLRD------------DLEALTSSLSFLQEVGLTPIVLHGAG-PQ-LDAELSA 110 (467)
T ss_dssp HHHHHHHHHSSSSSCSTTSCCCCCCHHHHTT------------CCHHHHHHHHHHHTTSCCCCCCCCCC-HH-HHHHHHT
T ss_pred HHHHHHHHHHHhCCCCCcEEEEEEChHHhhh------------HHHHHHHHHHHHHHCCCcEEEEECCC-hH-HHHHHHH
Confidence 3455666666553 2356778888886641 13677888888999999988888776 56 4888999
Q ss_pred cCCCCccc
Q 034147 86 LGIHSMFV 93 (103)
Q Consensus 86 ~~l~~~~~ 93 (103)
+|+..-|.
T Consensus 111 ~gi~~~f~ 118 (467)
T 3s6k_A 111 AGIEKQTV 118 (467)
T ss_dssp TSCCCCCC
T ss_pred cCCCcccc
Confidence 99876553
No 382
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=40.03 E-value=24 Score=24.28 Aligned_cols=28 Identities=18% Similarity=0.298 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHC-CCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEK-GIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~-G~~v~i~T~~~~~~i 78 (103)
+.+.++++.++++ |.+++.+|+.....+
T Consensus 111 ~e~l~a~~~ak~~~Ga~vIaIT~~~~S~L 139 (373)
T 2aml_A 111 TSTISALERVKKEASVPVVALTSDVTSEI 139 (373)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEESCTTSGG
T ss_pred HHHHHHHHHHHHhCCCcEEEEECCCCChH
Confidence 6789999999999 999999998775554
No 383
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=39.97 E-value=23 Score=23.48 Aligned_cols=64 Identities=8% Similarity=-0.099 Sum_probs=30.4
Q ss_pred ceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCC-eEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGI-HVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 23 ~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~-~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+.++.-+=|..+.... ............+.+-|..+++.|+ +++|++|+.. . ....++.+++..
T Consensus 24 ~~iVIKlGGs~l~~~~--~~~~~~~~~l~~la~~Ia~l~~~G~~~vViVhGgG~-~-~~~~l~~~~~~~ 88 (286)
T 3d40_A 24 DFLAIKVGGSLFSRKD--EPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGA-F-GHGAIRDHDSTH 88 (286)
T ss_dssp SEEEEEECGGGTBCTT--STTCBCHHHHHHHHHHHHHHHHHTTTSEEEEECCCC-C-------------
T ss_pred CEEEEEeCchHhCCCc--ccccchHHHHHHHHHHHHHHHHcCCCeEEEEECCHH-H-HHHHHHHcCCCc
Confidence 4688888888775210 0000111123445556667777798 6999998774 4 366666666544
No 384
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=39.96 E-value=43 Score=22.97 Aligned_cols=21 Identities=5% Similarity=0.126 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHHCCCeEEEEe
Q 034147 51 PHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T 71 (103)
.|+..+..+++++|.+++|-+
T Consensus 83 ~G~k~ladyih~~Glk~Giy~ 103 (400)
T 4do4_A 83 HGIPFLADYVHSLGLKLGIYA 103 (400)
T ss_dssp TCHHHHHHHHHHTTCEEEEEE
T ss_pred cccHHHHHHHHHCCceEEEec
Confidence 469999999999999999987
No 385
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=39.86 E-value=78 Score=24.94 Aligned_cols=57 Identities=12% Similarity=0.199 Sum_probs=35.4
Q ss_pred HHHHHHhhccCC---CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 9 NEALEIIGQFEN---LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 9 ~~~~~~~~~~~~---~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
++++++.....+ ..+++.+|+|-+ +...++. ..+-||...+++++|+++|.+++++-
T Consensus 306 ~ev~~vv~~~r~~~IPlDvi~~Didym--~~~~~FT----~d~~FPdp~~mv~~Lh~~G~k~v~ii 365 (908)
T 3top_A 306 SEIASLYDEMVAAQIPYDVQYSDIDYM--ERQLDFT----LSPKFAGFPALINRMKADGMRVILIL 365 (908)
T ss_dssp HHHHHHHHHHHHHTCCCCEEEECGGGS--STTCTTC----CCGGGTTHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeeeEEeecccc--ccccccc----cCCCCCCHHHHHHHHHHCCCEEEEEe
Confidence 344444443332 358889998753 1111111 11157899999999999999988654
No 386
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=39.72 E-value=18 Score=21.41 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHCC-CeEEEEeC
Q 034147 51 PHAKGILEALKEKG-IHVAVASR 72 (103)
Q Consensus 51 ~g~~~~l~~l~~~G-~~v~i~T~ 72 (103)
+...++++.+++.| +++.+|+.
T Consensus 85 ~~~~~ll~~~~~~G~v~~~aC~~ 107 (144)
T 2qs7_A 85 PMWHQLVQQAKEIGEVKVFACST 107 (144)
T ss_dssp CCHHHHHHHHHHHSEEEEEEEHH
T ss_pred CCHHHHHHHHHHCCCeEEEEeHH
Confidence 46789999999999 99999863
No 387
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=39.44 E-value=52 Score=19.69 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=23.2
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. +.+++++|+......... .-..|..+|+
T Consensus 64 ~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~-a~~~Ga~~~l 103 (208)
T 1yio_A 64 IELQEQLTAISDGIPIVFITAHGDIPMTVR-AMKAGAIEFL 103 (208)
T ss_dssp HHHHHHHHHTTCCCCEEEEESCTTSCCCHH-HHHTTEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCHHHHHH-HHHCCCcEEE
Confidence 5777787764 588999997764332233 3345654443
No 388
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=39.38 E-value=24 Score=24.53 Aligned_cols=19 Identities=11% Similarity=0.303 Sum_probs=16.5
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+..++++++++++|++|++
T Consensus 77 ~df~~lv~~aH~~Gi~Vil 95 (496)
T 4gqr_A 77 DEFRNMVTRCNNVGVRIYV 95 (496)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 4578899999999999976
No 389
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=39.24 E-value=51 Score=18.47 Aligned_cols=38 Identities=21% Similarity=0.285 Sum_probs=24.0
Q ss_pred HHHHHHHHH------CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE------KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~------~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ...+++++|+..... ........|..+|+
T Consensus 74 ~~~~~~lr~~~~~~~~~~pii~~s~~~~~~-~~~~~~~~Ga~~~l 117 (143)
T 3m6m_D 74 LDMLKQLRVMQASGMRYTPVVVLSADVTPE-AIRACEQAGARAFL 117 (143)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEEEESCCCHH-HHHHHHHTTCSEEE
T ss_pred HHHHHHHHhchhccCCCCeEEEEeCCCCHH-HHHHHHHcChhhee
Confidence 456666653 236899999877665 34455667766554
No 390
>1jg5_A GTP cyclohydrolase I feedback regulatory protein; alpha/beta structure, beta sheet, protein binding; 2.60A {Rattus norvegicus} SCOP: d.205.1.1 PDB: 1is8_K* 1is7_K* 1wpl_K*
Probab=39.17 E-value=26 Score=19.03 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=18.6
Q ss_pred HHHHHHHHHHCCCeEEEEeCCC
Q 034147 53 AKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
-.-+|++|...|+++.-.||-.
T Consensus 52 Pr~VLnKLE~~G~rVvsmtGvg 73 (83)
T 1jg5_A 52 PRIVLDKLECRGFRVLSMTGVG 73 (83)
T ss_dssp HHHHHHHHHHTTCEEEEEEEET
T ss_pred hHHHHHHHhccCeEEEEEecCC
Confidence 4678999999999999888654
No 391
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=39.00 E-value=51 Score=20.06 Aligned_cols=38 Identities=24% Similarity=0.360 Sum_probs=24.4
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+|+
T Consensus 56 ~~~~~~lr~~~~~~~ii~lt~~~~~~~-~~~~~~~Ga~~~l 95 (223)
T 2hqr_A 56 LSFVSRIKEKHSSIVVLVSSDNPTSEE-EVHAFEQGADDYI 95 (223)
T ss_dssp HHHHHHHHHHCTTSEEEEEESSCCHHH-HHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCCHHH-HHHHHHcCCCEEE
Confidence 4667777653 689999998876553 3334456665544
No 392
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=38.94 E-value=37 Score=23.40 Aligned_cols=33 Identities=9% Similarity=-0.060 Sum_probs=26.5
Q ss_pred hhHHHHHHHHHHC--CCeEEEEeCCCchhHHHHHHH
Q 034147 51 PHAKGILEALKEK--GIHVAVASRSPAPDIAKTFLH 84 (103)
Q Consensus 51 ~g~~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~ 84 (103)
+.+.++++.++++ |.+++.+|+.....+ ....+
T Consensus 117 ~e~l~a~~~ak~~~~ga~~iaIT~~~~S~L-a~~ad 151 (384)
T 3c3j_A 117 PESVAAVELANQFVPECYHLPITCNEAGAL-YQNAI 151 (384)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEESCTTSHH-HHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCCCHH-Hhhhc
Confidence 6788999999998 999999998876664 54444
No 393
>1wn8_A Kalata B3/B6, oantr protein; helix, plant protein; NMR {Synthetic} SCOP: j.113.1.1
Probab=38.89 E-value=18 Score=14.92 Aligned_cols=15 Identities=20% Similarity=0.344 Sum_probs=10.5
Q ss_pred HHHHHHHHHCCCeEE
Q 034147 54 KGILEALKEKGIHVA 68 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~ 68 (103)
.-++++++-+|.+++
T Consensus 10 ~~flkemqlkglpvc 24 (26)
T 1wn8_A 10 TMFLKEMQLKGLPXX 24 (26)
T ss_dssp HHHHHHHHHTTCC--
T ss_pred HHHHHHHHhcCCCCC
Confidence 447888998998875
No 394
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=38.35 E-value=38 Score=21.80 Aligned_cols=50 Identities=12% Similarity=-0.017 Sum_probs=31.3
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
++.++.=+=|+.+.... ...-.......+.+-+..+++.|++++|++|+.
T Consensus 7 ~k~iViKiGGs~l~~~~---~~~~~~~~i~~~a~~I~~l~~~G~~vvlV~gGG 56 (240)
T 4a7w_A 7 NKRVLVKFSGEALAGDN---QFGIDIHVLDHIAKEIKSLVENDIEVGIVIGGG 56 (240)
T ss_dssp CCEEEEEECGGGGGTTS---SSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred CCEEEEEECHHHcCCCC---CCCCCHHHHHHHHHHHHHHHHCCCcEEEEECCc
Confidence 56688888888775200 000011122345567777888999999999884
No 395
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=38.19 E-value=73 Score=20.16 Aligned_cols=36 Identities=22% Similarity=0.113 Sum_probs=17.5
Q ss_pred HHHHHHHHHHCC--C-eEEEEeCCCchhHHHHHHHHcCCC
Q 034147 53 AKGILEALKEKG--I-HVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 53 ~~~~l~~l~~~G--~-~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
...+++.+++.. + .++|+|+++... .....+++|++
T Consensus 14 l~ali~~~~~~~~~~~i~~Vis~~~~~~-~~~~A~~~gIp 52 (212)
T 1jkx_A 14 LQAIIDACKTNKIKGTVRAVFSNKADAF-GLERARQAGIA 52 (212)
T ss_dssp HHHHHHHHHTTSSSSEEEEEEESCTTCH-HHHHHHHTTCE
T ss_pred HHHHHHHHHcCCCCceEEEEEeCCCchH-HHHHHHHcCCc
Confidence 444555555432 2 345555555444 34555555554
No 396
>3ec4_A Putative acetyltransferase from the GNAT family; YP_497011.1, joint center for structural genomics; 1.80A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=38.19 E-value=72 Score=19.86 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=26.0
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+..+++.++++|.++.+.+...... +..+.+++|+..
T Consensus 179 l~~~~~~a~~~g~~i~l~v~~~N~~-a~~~Y~k~GF~~ 215 (228)
T 3ec4_A 179 IRKVIAGMAARGEVPYLHSYASNAS-AIRLYESLGFRA 215 (228)
T ss_dssp HHHHHHHHHHTTCEEEEEEETTCHH-HHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCeEEEEEeCCCHH-HHHHHHHCCCEE
Confidence 3456677788887776666554455 578899999864
No 397
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=38.02 E-value=31 Score=19.23 Aligned_cols=15 Identities=27% Similarity=0.368 Sum_probs=11.8
Q ss_pred CCceEEEeCCCCccc
Q 034147 21 LPRLVVFDLDYTLWP 35 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~ 35 (103)
-+.+++||-||.++.
T Consensus 92 ~Pt~~~~d~~G~~~~ 106 (133)
T 3fk8_A 92 IPAVVVVNSDGKVRY 106 (133)
T ss_dssp SSEEEEECTTSCEEE
T ss_pred cceEEEECCCCCEEE
Confidence 467788899998875
No 398
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=37.88 E-value=73 Score=20.13 Aligned_cols=37 Identities=11% Similarity=0.142 Sum_probs=20.4
Q ss_pred HHHHHHHHHHC--CCe-EEEEeCCCchhHHHHHHHHcCCCC
Q 034147 53 AKGILEALKEK--GIH-VAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 53 ~~~~l~~l~~~--G~~-v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+..+++.+++. ++. ++|+|+++... +....+.+|++-
T Consensus 17 ~~~~l~~l~~~~l~~~I~~Vit~~~~~~-v~~~A~~~gIp~ 56 (212)
T 3av3_A 17 FQAIVDAAKRGDLPARVALLVCDRPGAK-VIERAARENVPA 56 (212)
T ss_dssp HHHHHHHHHTTCCCEEEEEEEESSTTCH-HHHHHHHTTCCE
T ss_pred HHHHHHHHHhCCCCCeEEEEEeCCCCcH-HHHHHHHcCCCE
Confidence 45566666654 233 35666655445 355666666653
No 399
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=37.75 E-value=60 Score=20.08 Aligned_cols=34 Identities=15% Similarity=0.296 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~ 85 (103)
.-..++++.+++.|+.+.|.|+-.... .+..+-.
T Consensus 39 ~al~~m~~~a~~~Gi~l~i~sgyRs~~-~Q~~Ly~ 72 (179)
T 2vo9_A 39 DKTRNVIKKMAKEGIYLCVAQGYRSTA-EQNALYA 72 (179)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECCCCHH-HHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEEEECCHH-HHHHHHH
Confidence 445567778888999999988766555 3444433
No 400
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=37.70 E-value=68 Score=22.43 Aligned_cols=51 Identities=18% Similarity=0.085 Sum_probs=31.1
Q ss_pred eEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH
Q 034147 24 LVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 24 ~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~ 85 (103)
.++.=+-|+.+.. ......+.+.+..+++.|++++++.|..... ....++.
T Consensus 3 ~iViK~GGssl~~----------~~~i~~v~~~i~~l~~~g~~~vvV~sa~g~~-~~~ll~~ 53 (421)
T 3ab4_A 3 LVVQKYGGSSLES----------AERIRNVAERIVATKKAGNDVVVVCSAMGDT-TDELLEL 53 (421)
T ss_dssp EEEEEECSGGGSS----------HHHHHHHHHHHHHHHHTTCEEEEEECCSTTH-HHHHHHH
T ss_pred eEEEEEChhHhCC----------HHHHHHHHHHHHHHHhCCCCEEEEEcCCHHH-HHHHHHH
Confidence 4666777777641 1233456666777778899888777644344 3555544
No 401
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=37.57 E-value=59 Score=18.69 Aligned_cols=71 Identities=13% Similarity=0.133 Sum_probs=43.7
Q ss_pred HHHhhHHHHHHhhccCC--CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHH
Q 034147 4 LEKVKNEALEIIGQFEN--LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKT 81 (103)
Q Consensus 4 ~~~~~~~~~~~~~~~~~--~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~ 81 (103)
++.+.++..+.+...+. .-.-+++|+...- + . ....++++.|++.|..++=+++...+.. +.
T Consensus 27 ~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~-~----------~----~dl~~L~~~l~~~gl~~vGV~g~~~~~~-~~ 90 (120)
T 3ghf_A 27 PEVIRQALEDKIAQAPAFLKHAPVVINVSGLE-S----------P----VNWPELHKIVTSTGLRIIGVSGCKDASL-KV 90 (120)
T ss_dssp HHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC-S----------S----CCHHHHHHHHHTTTCEEEEEESCCCHHH-HH
T ss_pred HHHHHHHHHHHHHhChHhhCCCcEEEEccccC-C----------h----HHHHHHHHHHHHcCCEEEEEeCCCcHHH-HH
Confidence 34455555555554432 1234777775331 1 0 2467888999999988877777665543 66
Q ss_pred HHHHcCCCC
Q 034147 82 FLHKLGIHS 90 (103)
Q Consensus 82 ~l~~~~l~~ 90 (103)
.....|+..
T Consensus 91 ~a~~~GLp~ 99 (120)
T 3ghf_A 91 EIDRMGLPL 99 (120)
T ss_dssp HHHHHTCCE
T ss_pred HHHHCCCCc
Confidence 778888753
No 402
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=37.49 E-value=29 Score=22.34 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=26.6
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-+....+ + .+..+|.+.
T Consensus 201 ~~~v~~~~~~G~~v~~wTvn~~~~~-~-~l~~~Gvdg 235 (252)
T 2pz0_A 201 PELVEGCKKNGVKLFPWTVDRKEDM-E-RMIKAGVDG 235 (252)
T ss_dssp HHHHHHHHHTTCEECCBCCCSHHHH-H-HHHHHTCSE
T ss_pred HHHHHHHHHCCCEEEEECCCCHHHH-H-HHHHcCCCE
Confidence 6789999999999999997775552 4 455667643
No 403
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=37.35 E-value=51 Score=17.90 Aligned_cols=38 Identities=16% Similarity=0.212 Sum_probs=23.0
Q ss_pred HHHHHHHHH---CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE---KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~---~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ...+++++|+...... ....-..|..+|+
T Consensus 64 ~~~~~~l~~~~~~~~~ii~ls~~~~~~~-~~~~~~~ga~~~l 104 (130)
T 1dz3_A 64 LAVLERIRAGFEHQPNVIMLTAFGQEDV-TKKAVELGASYFI 104 (130)
T ss_dssp HHHHHHHHHHCSSCCEEEEEEETTCHHH-HHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCCCcEEEEecCCCHHH-HHHHHHcCCCEEE
Confidence 467777765 3467888887765542 3334455655543
No 404
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=37.25 E-value=48 Score=17.59 Aligned_cols=38 Identities=8% Similarity=0.099 Sum_probs=24.2
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+++
T Consensus 60 ~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 99 (121)
T 2pl1_A 60 LSLIRRWRSNDVSLPILVLTARESWQD-KVEVLSAGADDYV 99 (121)
T ss_dssp HHHHHHHHHTTCCSCEEEEESCCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEecCCCHHH-HHHHHHcCccceE
Confidence 4677777764 578999998776552 3344455665544
No 405
>2pw9_A Putative formate dehydrogenase accessory protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Desulfotalea psychrophila LSV54} SCOP: c.97.1.5
Probab=37.24 E-value=44 Score=22.22 Aligned_cols=36 Identities=14% Similarity=0.244 Sum_probs=26.9
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
..|++++....|+++.+.-+.+... +-...+++|+.
T Consensus 204 S~EmV~Kaa~aGIpvlvS~SApTsl-AV~lA~~~giT 239 (268)
T 2pw9_A 204 TSDMVLKCARIGIPIIMSRTSPSSL-GLALAKRSGAT 239 (268)
T ss_dssp CHHHHHHHHHHTCCEEEESSCBCHH-HHHHHHHHTCE
T ss_pred hHHHHHHHHHcCCCEEEEcccccHH-HHHHHHHcCCE
Confidence 3678888888888888777777665 77778888764
No 406
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=37.19 E-value=62 Score=18.81 Aligned_cols=54 Identities=17% Similarity=0.277 Sum_probs=32.0
Q ss_pred HHhhHHHHHHhhccCCCCc-eEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhH
Q 034147 5 EKVKNEALEIIGQFENLPR-LVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDI 78 (103)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i 78 (103)
+...+...+.+......-. +++.|+ ||+.+. +..+.+ +.+.++-++||=+.+.+
T Consensus 45 ~~~~~~i~~~i~~~d~~~GVLiL~Dm-GSp~n~----------------a~~l~~---~~~~~v~vI~gvnlpml 99 (130)
T 3gx1_A 45 KAMYEKLKQTVVKLNPVKGVLILSDM-GSLTSF----------------GNILTE---ELGIRTKTVTMVSTPVV 99 (130)
T ss_dssp HHHHHHHHHHHHTSCCTTCEEEEECS-GGGGTH----------------HHHHHH---HHCCCEEEECSCCHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEeC-CCHHHH----------------HHHHHH---hcCCCEEEEeCCCHHHH
Confidence 4555666666665544333 456699 998751 222222 22567888898887764
No 407
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=37.08 E-value=59 Score=20.22 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++.+.++++++.|+.++|..+- +-...+++|+...+
T Consensus 129 ~e~~~~i~~l~~~G~~vvVG~~~-----~~~~A~~~Gl~~vl 165 (196)
T 2q5c_A 129 DEITTLISKVKTENIKIVVSGKT-----VTDEAIKQGLYGET 165 (196)
T ss_dssp GGHHHHHHHHHHTTCCEEEECHH-----HHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCeEEECCHH-----HHHHHHHcCCcEEE
Confidence 56889999999999999876322 35557888886543
No 408
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=36.83 E-value=57 Score=18.32 Aligned_cols=38 Identities=3% Similarity=0.004 Sum_probs=22.3
Q ss_pred HHHHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcC-CCCcc
Q 034147 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLG-IHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~-l~~~~ 92 (103)
.++++++++ ...+++++|+...... ....-..| ...++
T Consensus 64 ~~~~~~l~~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~~l 104 (151)
T 3kcn_A 64 TEVIQKARLISPNSVYLMLTGNQDLTT-AMEAVNEGQVFRFL 104 (151)
T ss_dssp HHHHHHHHHHCSSCEEEEEECGGGHHH-HHHHHHHTCCSEEE
T ss_pred HHHHHHHHhcCCCcEEEEEECCCCHHH-HHHHHHcCCeeEEE
Confidence 566666665 3578999998775542 33333445 54443
No 409
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=36.71 E-value=25 Score=24.75 Aligned_cols=68 Identities=16% Similarity=0.109 Sum_probs=45.3
Q ss_pred HHHHHhhccCCCCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 10 EALEIIGQFENLPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 10 ~~~~~~~~~~~~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+++..++... .+.++.=+-|..+.. .. ...+.+-+..+++.|++++|++|+. .. +...++.+++.
T Consensus 33 ~~~~yi~~~~--~~~iViK~GG~~l~~-------~~----~~~~~~~i~~l~~~g~~vvlVhggg-~~-~~~~~~~~~~~ 97 (456)
T 3d2m_A 33 EAAPYIRQMR--GTTLVAGIDGRLLEG-------GT----LNKLAADIGLLSQLGIRLVLIHGAY-HF-LDRLAAAQGRT 97 (456)
T ss_dssp HHHHHHHHHT--TCEEEEEECGGGGTS-------TH----HHHHHHHHHHHHHTTCEEEEEECCH-HH-HHTTTTTTTCC
T ss_pred HhHHHHHHhc--CCEEEEEEChHHhcC-------ch----HHHHHHHHHHHHHCCCeEEEEeCCc-HH-HHHHHHHCCCC
Confidence 4455555443 345888888888751 11 3456667778888999999999876 44 36667777776
Q ss_pred Ccc
Q 034147 90 SMF 92 (103)
Q Consensus 90 ~~~ 92 (103)
..+
T Consensus 98 ~~~ 100 (456)
T 3d2m_A 98 PHY 100 (456)
T ss_dssp CCC
T ss_pred CEe
Confidence 433
No 410
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=36.62 E-value=55 Score=18.11 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=24.3
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+|+
T Consensus 64 ~~l~~~l~~~~~~~~ii~ls~~~~~~~-~~~~~~~ga~~~l 103 (137)
T 3cfy_A 64 EDVLDWINQNDIPTSVIIATAHGSVDL-AVNLIQKGAEDFL 103 (137)
T ss_dssp HHHHHHHHHTTCCCEEEEEESSCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCCCEEEEEecCcHHH-HHHHHHCCccEEE
Confidence 5677788764 578999998775542 3334455665544
No 411
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=36.62 E-value=39 Score=23.56 Aligned_cols=28 Identities=7% Similarity=0.166 Sum_probs=24.2
Q ss_pred hhHHHHHHHHHHC--CCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEK--GIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~--G~~v~i~T~~~~~~i 78 (103)
+.+.+.++.++++ |.+++.+|+.....+
T Consensus 122 ~e~l~al~~ak~~~~Ga~~iaIT~~~~S~L 151 (393)
T 3odp_A 122 PESTAAVTLAEKIVDDISHLIITCNSEGKL 151 (393)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHhhcCCCcEEEEECCCCCHH
Confidence 6788899999998 999999999886664
No 412
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=36.43 E-value=52 Score=17.71 Aligned_cols=38 Identities=8% Similarity=0.150 Sum_probs=24.4
Q ss_pred HHHHHHHHH----CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE----KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~----~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ...+++++|+...... ....-+.|...++
T Consensus 65 ~~l~~~l~~~~~~~~~~ii~~s~~~~~~~-~~~~~~~ga~~~l 106 (128)
T 1jbe_A 65 LELLKTIRAXXAMSALPVLMVTAEAKKEN-IIAAAQAGASGYV 106 (128)
T ss_dssp HHHHHHHHC--CCTTCCEEEEESSCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHhhcccCCCcEEEEecCccHHH-HHHHHHhCcCcee
Confidence 567888876 3578999998776552 3334456665544
No 413
>1qpg_A PGK, 3-phosphoglycerate kinase; phosphotransferase (carboxyl acceptor), acetylation, glycolysis; HET: MAP 3PG; 2.40A {Saccharomyces cerevisiae} SCOP: c.86.1.1 PDB: 3pgk_A*
Probab=36.43 E-value=27 Score=24.88 Aligned_cols=25 Identities=24% Similarity=0.186 Sum_probs=20.6
Q ss_pred ChhHHHHHHHHHHCCCe-EEEEe--CCC
Q 034147 50 YPHAKGILEALKEKGIH-VAVAS--RSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~-v~i~T--~~~ 74 (103)
...+...|++|-++|.+ ++++| ||+
T Consensus 39 I~aalpTIk~ll~~gak~Vil~SHlGRP 66 (415)
T 1qpg_A 39 IVAALPTIKYVLEHHPRYVVLASHLGQP 66 (415)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecCCCC
Confidence 35678899999999999 99999 555
No 414
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=36.36 E-value=87 Score=20.27 Aligned_cols=22 Identities=32% Similarity=0.353 Sum_probs=19.0
Q ss_pred hhHHHHHHHHHHCCCeEEEEeC
Q 034147 51 PHAKGILEALKEKGIHVAVASR 72 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~ 72 (103)
.++..-+..|++.|+.+-++|-
T Consensus 35 ~E~~~p~~~l~~aG~~V~~aSp 56 (247)
T 3n7t_A 35 SEALHPFNELTAAGFEVDVASE 56 (247)
T ss_dssp HHHHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHHCCCEEEEEeC
Confidence 5677788999999999999993
No 415
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=36.30 E-value=30 Score=22.37 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=26.8
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-+....+ + .+..+|.+.
T Consensus 226 ~~~v~~~~~~Gl~v~~wTvn~~~~~-~-~l~~~Gvdg 260 (272)
T 3ch0_A 226 KKDIDAAHKLGMRVIPWTVNTKEEI-E-TLISLGVDG 260 (272)
T ss_dssp HHHHHHHHHTTCEECCBCCCSHHHH-H-HHHHHTCSE
T ss_pred HHHHHHHHHcCCEEEEeccCCHHHH-H-HHHHcCCCE
Confidence 6789999999999999997776653 4 455667643
No 416
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=36.03 E-value=44 Score=23.59 Aligned_cols=34 Identities=12% Similarity=0.241 Sum_probs=27.0
Q ss_pred hhHHHHHHHHHH-CCC-----eEEEEeCCCchhHHHHHHHH
Q 034147 51 PHAKGILEALKE-KGI-----HVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 51 ~g~~~~l~~l~~-~G~-----~v~i~T~~~~~~i~~~~l~~ 85 (103)
+.+.++++.+++ .|+ ++.+.|++..+.+ ..+++.
T Consensus 186 d~v~~~i~~lk~~~Gl~~s~r~itlsTnG~~p~i-~~L~~~ 225 (404)
T 3rfa_A 186 NNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPAL-DKLGDM 225 (404)
T ss_dssp HHHHHHHHHHHSTTTTCCCGGGEEEEESCCHHHH-HHHHHH
T ss_pred HHHHHHHHHHHhhcCcCcCCCceEEECCCcHHHH-HHHHHh
Confidence 568889999998 488 8999999887663 666665
No 417
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=35.95 E-value=52 Score=17.56 Aligned_cols=38 Identities=11% Similarity=0.090 Sum_probs=23.3
Q ss_pred HHHHHHHHH-CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~-~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ...+++++|+...... ....-+.|..+++
T Consensus 63 ~~~~~~l~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 101 (123)
T 1xhf_A 63 LLLARELREQANVALMFLTGRDNEVD-KILGLEIGADDYI 101 (123)
T ss_dssp HHHHHHHHHHCCCEEEEEESCCSHHH-HHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCcEEEEECCCChHH-HHHHHhcCcceEE
Confidence 456666654 4688999998775542 3334455665544
No 418
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=35.90 E-value=60 Score=21.41 Aligned_cols=40 Identities=8% Similarity=0.012 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHCCC---eEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 51 PHAKGILEALKEKGI---HVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~---~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
+.+....+.++++|+ +++|||+..+..-+...+++.+.+.
T Consensus 128 ENa~~s~~ll~~~g~~~~~iiLVTs~~Hm~RA~~~f~~~~~~~ 170 (266)
T 3ca8_A 128 ENARFSIALLNQAVERVHTAIVVQDPTMQRRTMATFRRMTGDN 170 (266)
T ss_dssp HHHHHHHHHHHTCSSCCSCEEEECCTTTHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhcCCCCCeEEEECChhHHHHHHHHHHHhCCCC
Confidence 556666777788776 7999998886554666777776643
No 419
>2wq7_A RE11660P; lyase-DNA complex, DNA repair, DNA lesion, lyase; HET: TDY Z FAD; 2.00A {Drosophila melanogaster} PDB: 2wb2_A* 2wq6_A* 3cvu_A* 3cvv_A* 3cvy_A* 3cvw_A* 3cvx_A*
Probab=35.88 E-value=17 Score=26.57 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=32.6
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
++.++.++=+.|++.|+++.+..+.+... ...+++.+++...+
T Consensus 87 l~~sL~~L~~~L~~~G~~L~v~~g~~~~~-l~~l~~~~~~~~v~ 129 (543)
T 2wq7_A 87 LQQTLEDLDNQLRKLNSRLFVVRGKPAEV-FPRIFKSWRVEMLT 129 (543)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEESCHHHH-HHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHHcCCCEEE
Confidence 34556666678899999999999988776 48888888875433
No 420
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=35.67 E-value=1.2e+02 Score=22.81 Aligned_cols=59 Identities=17% Similarity=0.431 Sum_probs=36.1
Q ss_pred hHHHHHHhhccCC-C--CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 8 KNEALEIIGQFEN-L--PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 8 ~~~~~~~~~~~~~-~--~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
.++.+++.....+ . .+++.+|+|=+ +.+.++.- ....+|...+++++|+++|.++++.-
T Consensus 189 ~~ev~~v~~~~~~~~IP~dvi~lD~~y~--~~~~dft~---d~~~FPdp~~mv~~Lh~~G~k~~l~i 250 (693)
T 2g3m_A 189 QDKVVELVDIMQKEGFRVAGVFLDIHYM--DSYKLFTW---HPYRFPEPKKLIDELHKRNVKLITIV 250 (693)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECGGGS--BTTBTTCC---CTTTCSCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcceEEEeccee--cCCccceE---ChhhCCCHHHHHHHHHHCCCEEEEEe
Confidence 3444454444332 2 37788897643 21111111 12457888999999999999998875
No 421
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=35.45 E-value=84 Score=20.18 Aligned_cols=36 Identities=17% Similarity=0.147 Sum_probs=16.9
Q ss_pred HHHHHHHHHHC--CC-eEEEEeCCCchhHHHHHHHHcCCC
Q 034147 53 AKGILEALKEK--GI-HVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 53 ~~~~l~~l~~~--G~-~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+..+++.+++. ++ .++|+|+++... +....+.+|++
T Consensus 36 ~~~~l~~l~~~~~~~~I~~Vvt~~~~~~-~~~~A~~~gIp 74 (229)
T 3auf_A 36 LQAILDGCREGRIPGRVAVVISDRADAY-GLERARRAGVD 74 (229)
T ss_dssp HHHHHHHHHTTSSSEEEEEEEESSTTCH-HHHHHHHTTCE
T ss_pred HHHHHHHHHhCCCCCeEEEEEcCCCchH-HHHHHHHcCCC
Confidence 44455555543 22 234555544444 24445555554
No 422
>2wzb_A Phosphoglycerate kinase 1; hereditary hemolytic anemia, transferase, phosphoprotein, KI glycolysis, nucleotide-binding; HET: ADP 3PG; 1.47A {Homo sapiens} PDB: 2wzc_A* 2x13_A* 2x15_A* 2xe6_A* 2xe7_A* 2xe8_A* 2ybe_A* 3c3b_A* 2zgv_A* 3c3a_A* 3c39_A* 3c3c_A* 2wzd_A* 2x14_A* 2y3i_A* 1vjd_A* 1vjc_A* 1kf0_A* 1hdi_A* 2p9t_A* ...
Probab=35.01 E-value=27 Score=24.88 Aligned_cols=25 Identities=20% Similarity=0.220 Sum_probs=20.7
Q ss_pred ChhHHHHHHHHHHCCCe-EEEEe--CCC
Q 034147 50 YPHAKGILEALKEKGIH-VAVAS--RSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~-v~i~T--~~~ 74 (103)
...+...|++|-++|.+ ++++| ||+
T Consensus 39 I~aalpTIk~ll~~gak~Vil~SHlGRP 66 (416)
T 2wzb_A 39 IKAAVPSIKFCLDNGAKSVVLMSHLGRP 66 (416)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCSCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecCCCC
Confidence 35678899999999999 99999 555
No 423
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=34.88 E-value=35 Score=21.26 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=30.3
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
.-+++.|+=.-+.+. ........+.+..+++..++.|++++.+.
T Consensus 15 ~ALlvID~Q~~f~~~------~~~~~~~i~~i~~l~~~ar~~g~pVi~t~ 58 (199)
T 2b34_A 15 SALFVCDLQEKFASN------IKYFPEIITTSRRLIDAARILSIPTIVTE 58 (199)
T ss_dssp EEEEEECCBGGGTTS------STTHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEEeCHhHHhhh------cCCHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence 345677987776641 12223456777889999999999988765
No 424
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=34.53 E-value=22 Score=23.41 Aligned_cols=39 Identities=8% Similarity=-0.124 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHCC------CeEEEEeCCCchhHHHHHHHHcCCCCc
Q 034147 51 PHAKGILEALKEKG------IHVAVASRSPAPDIAKTFLHKLGIHSM 91 (103)
Q Consensus 51 ~g~~~~l~~l~~~G------~~v~i~T~~~~~~i~~~~l~~~~l~~~ 91 (103)
....+-|..+.+.| ++++|++|+.. . ....++++|+...
T Consensus 33 ~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~-~-~~~~~~~lgi~~~ 77 (266)
T 3k4o_A 33 ERIAMEIKNALDYYKNQNKEIKLILVHGGGA-F-GHPVAKKYLKIED 77 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEEECCHH-H-HHHHHGGGEEECS
T ss_pred HHHHHHHHHHHhccccccCCCCEEEEeCchH-H-HHHHHHHcCCCcc
Confidence 33444555666667 99999999863 3 4777888887654
No 425
>3o65_A Putative ataxin-3-like protein; papain-like fold, hydrolase-protein complex; 2.70A {Homo sapiens} PDB: 2aga_A 1yzb_A 2jri_A 2dos_A
Probab=34.41 E-value=42 Score=21.29 Aligned_cols=32 Identities=19% Similarity=0.181 Sum_probs=23.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHH
Q 034147 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLH 84 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~ 84 (103)
...+|.+|++.|+.+.+|.|.-+.--++..+.
T Consensus 149 L~~fL~ql~~eg~siFvV~g~lP~~~ad~~~~ 180 (191)
T 3o65_A 149 LANFLARLQQQAYSVFVVKGDLPDCEADQLLQ 180 (191)
T ss_dssp HHHHHGGGGSTTEEEEEEESCCCCCHHHHHHC
T ss_pred HHHHHHHHHHCCCEEEEEcCCCCCCCHHHHHH
Confidence 47788889999999999997765443555544
No 426
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=34.15 E-value=76 Score=20.94 Aligned_cols=37 Identities=16% Similarity=0.092 Sum_probs=24.0
Q ss_pred cChhHHHHHHHHHHCCCeEE-EEeCCCc-hhHHHHHHHHc
Q 034147 49 LYPHAKGILEALKEKGIHVA-VASRSPA-PDIAKTFLHKL 86 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~-i~T~~~~-~~i~~~~l~~~ 86 (103)
+.+...++.+.+++.|+..+ +++..+. +. .....+.-
T Consensus 133 p~ee~~~~~~~~~~~gl~~i~liaP~t~~er-i~~i~~~~ 171 (267)
T 3vnd_A 133 PVEESAPFSKAAKAHGIAPIFIAPPNADADT-LKMVSEQG 171 (267)
T ss_dssp CGGGCHHHHHHHHHTTCEEECEECTTCCHHH-HHHHHHHC
T ss_pred CHhhHHHHHHHHHHcCCeEEEEECCCCCHHH-HHHHHHhC
Confidence 44667889999999998754 6664443 44 35555543
No 427
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=34.11 E-value=50 Score=21.35 Aligned_cols=22 Identities=14% Similarity=0.261 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHCCCeEEEEeC
Q 034147 51 PHAKGILEALKEKGIHVAVASR 72 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~ 72 (103)
.++...+..|++.|+.+-++|-
T Consensus 29 ~E~~~p~~~l~~aG~~V~iaS~ 50 (244)
T 3kkl_A 29 VEILRSFDTFEKHGFEVDFVSE 50 (244)
T ss_dssp HHHHHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHHHHHCCCEEEEEeC
Confidence 5677788999999999999993
No 428
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=33.89 E-value=63 Score=17.96 Aligned_cols=38 Identities=11% Similarity=0.065 Sum_probs=19.7
Q ss_pred HHHHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ .+.+++++|+......... .-..|..+|+
T Consensus 65 ~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~-~~~~ga~~~l 104 (141)
T 3cu5_A 65 IELVDNILKLYPDCSVIFMSGYSDKEYLKA-AIKFRAIRYV 104 (141)
T ss_dssp HHHHHHHHHHCTTCEEEEECCSTTTCCC-------CCCEEE
T ss_pred HHHHHHHHhhCCCCcEEEEeCCCcHHHHHH-HHhCCccEEE
Confidence 467777765 3588999997664332122 2344554443
No 429
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=33.85 E-value=75 Score=18.82 Aligned_cols=36 Identities=14% Similarity=0.203 Sum_probs=23.5
Q ss_pred HHHHHHH--CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 56 ILEALKE--KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 56 ~l~~l~~--~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+++.+++ ...+++++|+...... ....-..|..+|+
T Consensus 69 l~~~~~~~~~~~~ii~lt~~~~~~~-~~~a~~~ga~~~l 106 (196)
T 1qo0_D 69 IAALLAAGTPRTTLVALVEYESPAV-LSQIIELECHGVI 106 (196)
T ss_dssp HHHHHHHSCTTCEEEEEECCCSHHH-HHHHHHHTCSEEE
T ss_pred HHHHHhccCCCCCEEEEEcCCChHH-HHHHHHcCCCeeE
Confidence 5666665 3689999998876553 4444556766554
No 430
>3r8s_F 50S ribosomal protein L5; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3j19_F* 3oat_F* 3ofc_F* 3ofz_F* 3ofr_F 3r8t_F 3i1n_F 1vs8_F 1vs6_F 1vt2_F 3i1p_F 3i1r_F 3i1t_F 3i20_F 3i22_F 3iyx_F 3iyy_F 3izt_G* 3izu_G* 3kcr_F ...
Probab=33.56 E-value=46 Score=20.79 Aligned_cols=27 Identities=7% Similarity=0.405 Sum_probs=20.8
Q ss_pred CCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 63 KGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 63 ~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
.|..+.|+|+.....-+..++..+|++
T Consensus 149 ~GmdI~ivtta~td~ea~~LL~~~g~P 175 (177)
T 3r8s_F 149 RGLDITITTTAKSDEEGRALLAAFDFP 175 (177)
T ss_dssp CCCBCEEEESCSSHHHHHHHHHHTCCC
T ss_pred cceeEEEEeCcCCHHHHHHHHHHcCCC
Confidence 588888888766544489999999984
No 431
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=33.51 E-value=64 Score=17.92 Aligned_cols=36 Identities=31% Similarity=0.524 Sum_probs=22.5
Q ss_pred HHHHHHHHHCCCeEE-EEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVA-VASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~-i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
..+++.+++.|+..+ +.+...... +..+.+++|+..
T Consensus 108 ~~~~~~a~~~g~~~i~l~v~~~N~~-a~~~Y~k~GF~~ 144 (153)
T 1z4e_A 108 CWAIERAKERGCHLIQLTTDKQRPD-ALRFYEQLGFKA 144 (153)
T ss_dssp HHHHHHHHHTTEEEEEEEEETTCTT-HHHHHHHHTCEE
T ss_pred HHHHHHHHHcCCCEEEEEEccCChH-HHHHHHHcCCce
Confidence 445567778887644 334333334 577889999854
No 432
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=33.30 E-value=49 Score=22.24 Aligned_cols=35 Identities=9% Similarity=0.231 Sum_probs=24.0
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
..+.+-+..|++.|++++|++|+.. . +...+..++
T Consensus 31 ~~~a~~I~~l~~~G~~vVlVhGgg~-~-i~~~l~~~~ 65 (314)
T 1e19_A 31 RKTARQIAEIIARGYEVVITHGNGP-Q-VGSLLLHMD 65 (314)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCHH-H-HHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEeCChH-H-HhHHHHhcc
Confidence 4556677778888999999998873 3 244455443
No 433
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=33.24 E-value=77 Score=18.75 Aligned_cols=42 Identities=17% Similarity=0.184 Sum_probs=22.2
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE 62 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~ 62 (103)
.|.+++||-||.++.-.............+..+.++|+.+++
T Consensus 101 ~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~ 142 (151)
T 3ph9_A 101 VPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKK 142 (151)
T ss_dssp SSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHH
T ss_pred CCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHH
Confidence 366788899999886211100111111233456777776664
No 434
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=33.12 E-value=61 Score=20.05 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=31.7
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
+.-+++.|+=.-+.+... .......+.+.+..+++..++.|++++.+.
T Consensus 12 ~~ALlvID~Q~~f~~~~~---~~~~~~~~i~~i~~l~~~ar~~g~pVi~~~ 59 (198)
T 3mcw_A 12 KPLLLLIDMQQAVDDPSW---GPRNHPQAEQACAGLLQAWRARGLPLIHIR 59 (198)
T ss_dssp CCEEEEECCBGGGGSGGG---CCBSCTTHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCEEEEEeCchhhcCCCc---cccChHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 345678898766665211 011223455778889999999999988776
No 435
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=33.12 E-value=28 Score=21.40 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=18.2
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRS 73 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~ 73 (103)
....++|..|+++|+.++.++-.
T Consensus 163 ~al~~ii~~l~~~Gy~~v~l~~~ 185 (195)
T 2cc0_A 163 AAIPRIAQTLAGKGLCSGMISPQ 185 (195)
T ss_dssp HHHHHHHHHHHHTTEEECEECTT
T ss_pred HHHHHHHHHHHHCCCEEEEeCcc
Confidence 34567899999999999888743
No 436
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=33.03 E-value=35 Score=23.92 Aligned_cols=19 Identities=11% Similarity=0.254 Sum_probs=16.4
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+..++++++++++|++|++
T Consensus 65 ~dfk~Lv~~aH~~Gi~Vil 83 (448)
T 1g94_A 65 AQFIDMVNRCSAAGVDIYV 83 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 4678899999999999875
No 437
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=32.94 E-value=37 Score=22.29 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=26.4
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
.++++.++++|+++.+.|-+....+ + .+..+|.+.
T Consensus 231 ~~~v~~~~~~G~~v~~wTvn~~~~~-~-~l~~~GVdg 265 (287)
T 2oog_A 231 EQNTHHLKDLGFIVHPYTVNEKADM-L-RLNKYGVDG 265 (287)
T ss_dssp HHHHHHHHHTTCEECCBCCCSHHHH-H-HHHHHTCSE
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHH-H-HHHHcCCCE
Confidence 5788999999999999997775552 4 455667643
No 438
>1u3d_A Cryptochrome 1 apoprotein; photolyase, AMPPNP, signaling protein; HET: FAD ANP NDS; 2.45A {Arabidopsis thaliana} SCOP: a.99.1.1 c.28.1.1 PDB: 1u3c_A*
Probab=32.87 E-value=53 Score=23.63 Aligned_cols=43 Identities=12% Similarity=0.181 Sum_probs=31.1
Q ss_pred cChhHHHHHHHHHHCCCeEEEEeC-CCchhHHHHHHHHcCCCCcc
Q 034147 49 LYPHAKGILEALKEKGIHVAVASR-SPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T~-~~~~~i~~~~l~~~~l~~~~ 92 (103)
++.++.++=+.|++.|+++.+..+ .+... ...+++++++...+
T Consensus 63 l~~sL~~L~~~L~~~G~~L~v~~~g~~~~~-l~~l~~~~~~~~V~ 106 (509)
T 1u3d_A 63 LKNSLAQLDSSLRSLGTCLITKRSTDSVAS-LLDVVKSTGASQIF 106 (509)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSCHHHH-HHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEeCCCHHHH-HHHHHHHcCCCEEE
Confidence 345566666778999999999984 55455 48888888875543
No 439
>3fy4_A 6-4 photolyase; DNA repair, clock cryptochrome; HET: MES FAD; 2.70A {Arabidopsis thaliana}
Probab=32.85 E-value=15 Score=26.90 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
....++=+.|++.|.++.|..|.+... ...+++.+++...+
T Consensus 68 ~sL~~L~~~L~~~G~~L~v~~G~~~~v-l~~L~~~~~~~~V~ 108 (537)
T 3fy4_A 68 ESLKDLDSSLKKLGSRLLVFKGEPGEV-LVRCLQEWKVKRLC 108 (537)
T ss_dssp HHHHHHHHHHHHTTCCCEEEESCHHHH-HHHHHTTSCEEEEE
T ss_pred HHHHHHHHHHHHcCCceEEEECCHHHH-HHHHHHHcCCCEEE
Confidence 445555667888999999999988666 47778877775544
No 440
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=32.48 E-value=58 Score=17.14 Aligned_cols=38 Identities=11% Similarity=0.136 Sum_probs=23.2
Q ss_pred HHHHHHHHH-CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~-~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ...+++++|+...... ....-+.|..+++
T Consensus 61 ~~~~~~l~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 99 (120)
T 2a9o_A 61 LEVAKTIRKTSSVPILMLSAKDSEFD-KVIGLELGADDYV 99 (120)
T ss_dssp HHHHHHHHHHCCCCEEEEESCCSHHH-HHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCCEEEEecCCchHH-HHHHHhCCHhheE
Confidence 355666653 5688999998776552 3334456665544
No 441
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=32.46 E-value=78 Score=19.06 Aligned_cols=47 Identities=21% Similarity=0.269 Sum_probs=29.5
Q ss_pred ceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 23 ~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
-+++.|+=.-+++... ..........+.+..+++..++.|.+++.+.
T Consensus 5 aLlvID~Q~~f~~~g~--l~~~~~~~~v~~i~~l~~~ar~~g~pVi~t~ 51 (180)
T 1im5_A 5 ALIVVDMQRDFMPGGA--LPVPEGDKIIPKVNEYIRKFKEKGALIVATR 51 (180)
T ss_dssp EEEEECCBGGGSTTSS--SCCTTGGGGHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEcCCCccCCCCc--ccCCCHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 3566787555542100 0012223466788899999999999988776
No 442
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=32.45 E-value=41 Score=21.61 Aligned_cols=51 Identities=16% Similarity=0.023 Sum_probs=27.3
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH-CCCeEEEEeC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE-KGIHVAVASR 72 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~-~G~~v~i~T~ 72 (103)
.++.+++++|++.+.............-...+.+.|+++.+ ..++.+++++
T Consensus 3 ~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~ 54 (240)
T 3rst_A 3 SKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKV 54 (240)
T ss_dssp CEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEE
T ss_pred CeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 46788899999997310000000001122456677777764 4577777763
No 443
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=32.43 E-value=66 Score=17.70 Aligned_cols=39 Identities=13% Similarity=0.231 Sum_probs=23.0
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+..........+...|..+|+
T Consensus 60 ~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l 100 (139)
T 2jk1_A 60 VDFLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQFL 100 (139)
T ss_dssp HHHHHHHHHHCTTSEEEEEESCTTCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHhCCCCcEEEEeCCCChHHHHHHHHhhchhhhc
Confidence 4677777653 47888898776433234444444554443
No 444
>3i0z_A Putative tagatose-6-phosphate ketose/aldose isome; NP_344614.1, putative putative tagatose-6-phosphate ketose/A isomerase; HET: MSE; 1.70A {Streptococcus pneumoniae TIGR4}
Probab=32.36 E-value=50 Score=22.96 Aligned_cols=28 Identities=7% Similarity=0.121 Sum_probs=24.1
Q ss_pred hhHHHHHHHHHHC--CCeEEEEeCCCchhH
Q 034147 51 PHAKGILEALKEK--GIHVAVASRSPAPDI 78 (103)
Q Consensus 51 ~g~~~~l~~l~~~--G~~v~i~T~~~~~~i 78 (103)
+.+.+.++.++++ |.+++.+|+.....+
T Consensus 123 ~e~~~al~~ak~~~~g~~~i~IT~~~~s~l 152 (389)
T 3i0z_A 123 PESLATVDLAKSLVDELYQVTITCAADGKL 152 (389)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEESCTTSHH
T ss_pred HHHHHHHHHHHhhcCCCcEEEEECCCCCHH
Confidence 6788999999998 999999998876664
No 445
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=32.23 E-value=81 Score=19.99 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=21.2
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHH
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHK 85 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~ 85 (103)
..+.++|.++|..++++.+++... .+...+.
T Consensus 40 ~~la~~l~~~G~~v~i~~~r~~~~-~~~~~~~ 70 (267)
T 4iiu_A 40 RAIARQLAADGFNIGVHYHRDAAG-AQETLNA 70 (267)
T ss_dssp HHHHHHHHHTTCEEEEEESSCHHH-HHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCchHH-HHHHHHH
Confidence 456688888999998887777554 3444443
No 446
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=32.22 E-value=54 Score=20.13 Aligned_cols=46 Identities=22% Similarity=0.249 Sum_probs=30.5
Q ss_pred ceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 23 RLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 23 ~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
-+++.|+=.-+++... .........+.+..+++..++.|.+++.+.
T Consensus 21 ALlvID~Q~~f~~~~~---~~~~~~~~i~~i~~ll~~ar~~g~pVi~t~ 66 (199)
T 1j2r_A 21 ALVVIDLQEGILPFAG---GPHTADEVVNRAGKLAAKFRASGQPVFLVR 66 (199)
T ss_dssp EEEEECCSTTTGGGCC---BSSCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEecchhhhCCCc---ccccHHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 4577799877765210 011222455777888999999999988776
No 447
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=32.16 E-value=59 Score=21.46 Aligned_cols=38 Identities=21% Similarity=0.441 Sum_probs=26.2
Q ss_pred ChhHHHHHHHHHHCCCeEEEEe-CCCchhHHHHHHHHcCCC
Q 034147 50 YPHAKGILEALKEKGIHVAVAS-RSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T-~~~~~~i~~~~l~~~~l~ 89 (103)
.+.+.+.++.|++.|+++++== |..... -..+..+.++
T Consensus 162 ~~~~~~~l~~Lr~~G~~ialDDFGtG~ss--l~~L~~l~~d 200 (294)
T 2r6o_A 162 TDEVRTCLDALRARGVRLALDDFGTGYSS--LSYLSQLPFH 200 (294)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEETSSCBC--HHHHHHSCCC
T ss_pred hHHHHHHHHHHHHCCCEEEEECCCCCchh--HHHHHhCCCC
Confidence 3568889999999999999754 333334 2346666653
No 448
>1dnp_A DNA photolyase; DNA repair, electron transfer, excitation energy transfer, carbon-carbon, lyase (carbon-carbon); HET: DNA FAD MHF; 2.30A {Escherichia coli} SCOP: a.99.1.1 c.28.1.1
Probab=31.97 E-value=17 Score=25.99 Aligned_cols=43 Identities=21% Similarity=0.270 Sum_probs=31.3
Q ss_pred cChhHHHHHHHHHHCCCeEEEE----eCCCchhHHHHHHHHcCCCCcc
Q 034147 49 LYPHAKGILEALKEKGIHVAVA----SRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~----T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+..++.++=+.|++.|+++.+. .|.+... ...++++++....+
T Consensus 54 l~~sL~~L~~~L~~~G~~L~v~~~~~~g~~~~~-l~~l~~~~~~~~v~ 100 (471)
T 1dnp_A 54 INAQLNGLQIALAEKGIPLLFREVDDFVASVEI-VKQVCAENSVTHLF 100 (471)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSHHHHHHH-HHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHCCCeEEEEEccCCCCHHHH-HHHHHHHcCCCEEE
Confidence 4466666777889999999999 6666565 47778888875543
No 449
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=31.86 E-value=53 Score=20.87 Aligned_cols=24 Identities=21% Similarity=0.278 Sum_probs=21.0
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchh
Q 034147 54 KGILEALKEKGIHVAVASRSPAPD 77 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~ 77 (103)
.++++.++++|+++.+.|-+....
T Consensus 188 ~~~v~~~~~~G~~v~~wTvn~~~~ 211 (234)
T 1o1z_A 188 VEVLRSFRKKGIVIFVWTLNDPEI 211 (234)
T ss_dssp HHHHHHHHHTTCEEEEESCCCHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCCHHH
Confidence 689999999999999999777555
No 450
>2pd2_A Hypothetical protein ST0148; structural genomics, NPPSFA, national project on protein STR and functional analyses; 2.06A {Sulfolobus tokodaii}
Probab=31.45 E-value=32 Score=18.85 Aligned_cols=21 Identities=29% Similarity=0.409 Sum_probs=17.7
Q ss_pred HHHHHHHHHHCCCeEEEEeCC
Q 034147 53 AKGILEALKEKGIHVAVASRS 73 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~ 73 (103)
..+.++.|.+.|+++.+|.+.
T Consensus 50 ~~~~i~~l~~~gV~~~~C~~s 70 (108)
T 2pd2_A 50 TRSIIEDLIKKNILIVGCENS 70 (108)
T ss_dssp THHHHHHHHHTTCEEEEEHHH
T ss_pred HHHHHHHHHHCcCEEEecHHH
Confidence 678899999999999998643
No 451
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=31.43 E-value=48 Score=21.92 Aligned_cols=18 Identities=28% Similarity=0.200 Sum_probs=9.5
Q ss_pred HHHHHHHHHCCCeEEEEe
Q 034147 54 KGILEALKEKGIHVAVAS 71 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T 71 (103)
.++++.+++.|+++++.|
T Consensus 240 ~~~~~~~~~~g~~i~igS 257 (283)
T 3dcp_A 240 KKIVTLASELQIPFVYGS 257 (283)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 445555555555555444
No 452
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=31.24 E-value=53 Score=20.07 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=17.2
Q ss_pred cChhHHHHHHHHHHCCCeEE-EEe
Q 034147 49 LYPHAKGILEALKEKGIHVA-VAS 71 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~-i~T 71 (103)
..+.+.+++++..++|.+++ ||+
T Consensus 86 ~~~~~~~~l~~~~~~~k~iaaIC~ 109 (177)
T 4hcj_A 86 DDWRTQGLAKLFLDNQKIVAGIGS 109 (177)
T ss_dssp TCHHHHHHHHHHHHTTCEEEEETT
T ss_pred hCHHHHHHHHHHHHhCCEEEEecc
Confidence 34678899999999988774 443
No 453
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=31.15 E-value=57 Score=20.19 Aligned_cols=22 Identities=9% Similarity=0.120 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHCCCeEEEEeCC
Q 034147 52 HAKGILEALKEKGIHVAVASRS 73 (103)
Q Consensus 52 g~~~~l~~l~~~G~~v~i~T~~ 73 (103)
.+.+++..+++...+++++||-
T Consensus 114 ~~~~ll~~l~~~~~~~vlVsNE 135 (180)
T 1c9k_A 114 EIQILIAACQRCPAKVVLVTNE 135 (180)
T ss_dssp HHHHHHHHHHHCCSEEEEECCC
T ss_pred HHHHHHHHHHccCCCEEEEEcc
Confidence 4567889999999999999953
No 454
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=31.12 E-value=43 Score=20.94 Aligned_cols=20 Identities=15% Similarity=0.209 Sum_probs=14.2
Q ss_pred hHHHHHHHHHHCCCeEEEEe
Q 034147 52 HAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 52 g~~~~l~~l~~~G~~v~i~T 71 (103)
...+.++.+++.|++++++.
T Consensus 72 ~~~~~~~~~~~~~ipvV~~~ 91 (276)
T 3ksm_A 72 DLTPSVAQYRARNIPVLVVD 91 (276)
T ss_dssp TTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHCCCcEEEEe
Confidence 34567777888788877765
No 455
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=31.10 E-value=43 Score=19.96 Aligned_cols=23 Identities=9% Similarity=0.052 Sum_probs=19.3
Q ss_pred cChhHHHHHHHHHHCCCeEEEEe
Q 034147 49 LYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
......++++.++++|.+++++|
T Consensus 115 ~~~~l~~~i~~~~~~~~~vil~~ 137 (216)
T 3rjt_A 115 YRDTLRHLVATTKPRVREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHGGGSSEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCeEEEEC
Confidence 34567789999999999999998
No 456
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=31.07 E-value=53 Score=20.74 Aligned_cols=24 Identities=29% Similarity=0.448 Sum_probs=18.4
Q ss_pred ccChhHHHHHHHHHHCCCeEEEEe
Q 034147 48 YLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 48 ~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
+.++...++++.|.+.|++|++.-
T Consensus 101 QFfk~~ve~~~~L~~~gk~VI~~G 124 (195)
T 1w4r_A 101 QFFPDIVEFCEAMANAGKTVIVAA 124 (195)
T ss_dssp GGCTTHHHHHHHHHHTTCEEEEEE
T ss_pred hhhHHHHHHHHHHHHCCCeEEEEe
Confidence 444678999999999998776543
No 457
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=31.05 E-value=77 Score=18.05 Aligned_cols=46 Identities=15% Similarity=-0.075 Sum_probs=27.9
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHH-HCCCeEEEEe
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALK-EKGIHVAVAS 71 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~-~~G~~v~i~T 71 (103)
.++-++|=-||+..-. .............+.++.|. +.|+++.+|.
T Consensus 33 ~v~~vff~~dGV~~~~-----~~~~p~~~~~~l~~~~~~L~~~~gv~l~vC~ 79 (130)
T 2hy5_A 33 EIFRVFFYHDGVNNST-----RLTTPPQDDRHIVNRWAELAEQYELDMVVCV 79 (130)
T ss_dssp EEEEEEECGGGGGGGB-----SCCCCCTTSCCHHHHHHHHHHHHTCCEEEEH
T ss_pred eeCEEEEechHHHHHh-----cCCCCCcccCCHHHHHHHHHHHcCCeEEEeH
Confidence 4546888999997642 11111111234666778884 4489998886
No 458
>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein STR and functional analyses; 1.70A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 2d4o_A
Probab=30.99 E-value=87 Score=18.67 Aligned_cols=36 Identities=14% Similarity=0.235 Sum_probs=28.0
Q ss_pred HHHHHHHHHCC-CeEEEEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKG-IHVAVASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G-~~v~i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
..+.+.+++.| .++.+.|-..-.. +..+.+++|+..
T Consensus 81 ~~a~~~a~~~G~~rv~L~~~~~N~~-a~~fye~~Gf~~ 117 (141)
T 2d4p_A 81 RAVVKSAYDAGVYEVALHLDPERKE-LEEALKAEGFAL 117 (141)
T ss_dssp HHHHHHHHHTTCSEEEECCCTTCHH-HHHHHHHTTCCC
T ss_pred HHHHHHHHHCCCCEEEEEecccCHH-HHHHHHHCCCEe
Confidence 44667888889 6788888777666 799999999754
No 459
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=30.99 E-value=89 Score=18.77 Aligned_cols=38 Identities=24% Similarity=0.165 Sum_probs=25.0
Q ss_pred HHHHHHHHHC--CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK--GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~--G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+|+
T Consensus 67 ~~~~~~lr~~~~~~~ii~ls~~~~~~~-~~~~~~~Ga~~~l 106 (215)
T 1a04_A 67 LETLDKLREKSLSGRIVVFSVSNHEED-VVTALKRGADGYL 106 (215)
T ss_dssp HHHHHHHHHSCCCSEEEEEECCCCHHH-HHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCCcEEEEECCCCHHH-HHHHHHcCCcEEE
Confidence 5778888775 478999998776553 3334456665544
No 460
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=30.96 E-value=51 Score=19.23 Aligned_cols=37 Identities=19% Similarity=0.070 Sum_probs=22.1
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHH
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKE 62 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~ 62 (103)
.+..+++|-||++...+ ........+...++++.+++
T Consensus 129 ~p~~~liD~~G~i~~~~-----~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 129 ARAVFVLDADNKVVYKE-----IVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp CCEEEEECTTCBEEEEE-----ECSBTTSCCCHHHHHHHHHT
T ss_pred eeEEEEECCCCeEEEEE-----EcCCcccCCCHHHHHHHHhc
Confidence 35668889999988531 11112223456777777764
No 461
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=30.95 E-value=1.2e+02 Score=20.12 Aligned_cols=24 Identities=17% Similarity=0.589 Sum_probs=20.3
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 51 PHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
+-..+++++++++|+++.+.|-+.
T Consensus 215 ~~~~~~V~~ah~~G~~V~vWTv~t 238 (292)
T 3mz2_A 215 PEVREVIDMLHERGVMCMISTAPS 238 (292)
T ss_dssp HHHHHHHHHHHHTTBCEEEECTTT
T ss_pred ccCHHHHHHHHHCCCEEEEEeCCC
Confidence 446789999999999999999554
No 462
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=30.90 E-value=39 Score=23.98 Aligned_cols=19 Identities=16% Similarity=0.340 Sum_probs=16.5
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+..++++++++++|++|++
T Consensus 80 ~dfk~Lv~~aH~~Gi~Vil 98 (549)
T 4aie_A 80 ADMDELISKAKEHHIKIVM 98 (549)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 4678899999999999875
No 463
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=30.87 E-value=39 Score=23.86 Aligned_cols=19 Identities=26% Similarity=0.405 Sum_probs=16.5
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+...+++++++++|++|++
T Consensus 83 ~df~~Lv~~aH~~Gi~Vil 101 (485)
T 1wpc_A 83 SQLQAAVTSLKNNGIQVYG 101 (485)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 4678899999999999875
No 464
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=30.80 E-value=44 Score=20.82 Aligned_cols=20 Identities=15% Similarity=0.345 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHCCCeEEEEe
Q 034147 52 HAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 52 g~~~~l~~l~~~G~~v~i~T 71 (103)
.+.+.++.|++.|+++++==
T Consensus 129 ~~~~~l~~Lr~~G~~ialDD 148 (235)
T 3kzp_A 129 FILNKIKVIHGLGYHIAIDD 148 (235)
T ss_dssp HHHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 57889999999999999753
No 465
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=30.79 E-value=72 Score=17.67 Aligned_cols=36 Identities=8% Similarity=0.170 Sum_probs=23.2
Q ss_pred HHHHHHHHHCCCeEE-EEeCCCchhHHHHHHHHcCCCC
Q 034147 54 KGILEALKEKGIHVA-VASRSPAPDIAKTFLHKLGIHS 90 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~-i~T~~~~~~i~~~~l~~~~l~~ 90 (103)
..+++.++++|+..+ +.+...... +..+.+++|+..
T Consensus 97 ~~~~~~~~~~g~~~i~l~~~~~n~~-a~~~y~~~GF~~ 133 (162)
T 3lod_A 97 AALEAKARQRDCHTLRLETGIHQHA-AIALYTRNGYQT 133 (162)
T ss_dssp HHHHHHHHTTTCCEEEEEEETTCHH-HHHHHHHTTCEE
T ss_pred HHHHHHHHHCCCcEEEEEecCCCHH-HHHHHHHcCCEE
Confidence 456677777887644 444333344 578889999864
No 466
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=30.73 E-value=50 Score=19.08 Aligned_cols=44 Identities=14% Similarity=0.019 Sum_probs=27.9
Q ss_pred EEEeCCCCcccccccccccCC--CcccChhHHHHHHHHHHCCCeEEEEeC
Q 034147 25 VVFDLDYTLWPFYCECCYEDE--IPYLYPHAKGILEALKEKGIHVAVASR 72 (103)
Q Consensus 25 ~~fD~DGTL~~~~~~~~~~~~--~~~~~~g~~~~l~~l~~~G~~v~i~T~ 72 (103)
++|=.||+..-.. .... ...-.+...++++.+++.|.++.+|..
T Consensus 51 vFf~~dGV~~l~k----~~~~~i~~~~~~~~~~ll~~~~~~Gv~v~vC~~ 96 (134)
T 3mc3_A 51 VFFMIXGPXLLDX----XWQEEERXXGGNPFIHFFDMAXENGVXMYVCVQ 96 (134)
T ss_dssp EEECTTGGGGGBH----HHHHHHHHHCCCHHHHHHHHHHHTTCEEEEEHH
T ss_pred EEEEeCcHHHHhh----cchhhcccCCCCCHHHHHHHHHHcCCcEEEcHh
Confidence 7778899875311 0000 001123478899999999999998853
No 467
>1x52_A Pelota homolog, CGI-17; ERF1_3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.79.3.2
Probab=30.66 E-value=81 Score=18.22 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=23.8
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcC
Q 034147 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLG 87 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~ 87 (103)
..++++..++.|.++.++|+...+- .+ ++.+|
T Consensus 76 ~~el~e~~~~~G~~V~ivs~~~~~G--~q-L~~~g 107 (124)
T 1x52_A 76 YVRLVDSVKENAGTVRIFSSLHVSG--EQ-LSQLT 107 (124)
T ss_dssp HHHHHHHHHHTTCEEEEECSSSHHH--HH-HHTTT
T ss_pred HHHHHHHHHHcCCEEEEECCCCccH--HH-HhcCC
Confidence 5567888999999999999988543 33 35543
No 468
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=30.65 E-value=40 Score=23.81 Aligned_cols=19 Identities=11% Similarity=0.240 Sum_probs=16.4
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+..++++++++++|++|++
T Consensus 79 ~df~~lv~~aH~~Gi~Vil 97 (483)
T 3bh4_A 79 SELQDAIGSLHSRNVQVYG 97 (483)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 4678899999999999875
No 469
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=30.62 E-value=19 Score=19.51 Aligned_cols=24 Identities=13% Similarity=0.267 Sum_probs=17.6
Q ss_pred HHHHHHHHH----CCCeEEEEeCCCchh
Q 034147 54 KGILEALKE----KGIHVAVASRSPAPD 77 (103)
Q Consensus 54 ~~~l~~l~~----~G~~v~i~T~~~~~~ 77 (103)
.++++++++ .+.+++++|+.....
T Consensus 62 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~ 89 (127)
T 2jba_A 62 IQFIKHLRRESMTRDIPVVMLTARGEEE 89 (127)
T ss_dssp HHHHHHHHTSTTTTTSCEEEEEETTHHH
T ss_pred HHHHHHHHhCcccCCCCEEEEeCCCCHH
Confidence 578888876 358899999877443
No 470
>1iq4_A 50S ribosomal protein L5; rRNA-binding, RNP motif, RNA binding PROT; 1.80A {Geobacillus stearothermophilus} SCOP: d.77.1.1
Probab=30.61 E-value=62 Score=20.21 Aligned_cols=28 Identities=18% Similarity=0.456 Sum_probs=21.5
Q ss_pred HCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 62 EKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 62 ~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
-.|..+.|+|++....-+..++..+|++
T Consensus 149 i~GmdI~ivtta~td~ea~~LL~~~g~P 176 (179)
T 1iq4_A 149 VRGMDIVIVTTANTDEEARELLALLGMP 176 (179)
T ss_dssp CCCEEEEEEESCSSHHHHHHHHHHHTCC
T ss_pred ccCceEEEEeeeCCHHHHHHHHHHcCCc
Confidence 4588899998776544478899999974
No 471
>1jei_A Emerin; membrane protein; NMR {Synthetic} SCOP: a.140.1.1 PDB: 2odc_I 2odg_C
Probab=30.59 E-value=18 Score=18.09 Aligned_cols=32 Identities=9% Similarity=-0.007 Sum_probs=26.1
Q ss_pred HHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 54 KGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 54 ~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
.++..+|.+.|++.+-+|++.+.- -+..+.++
T Consensus 9 ~eLr~~L~~~G~~~GPIt~sTRkl-YeKKL~~l 40 (53)
T 1jei_A 9 TELTTLLRRYNIPHGPVVGSTRRL-YEKKIFEY 40 (53)
T ss_dssp HHHHHHHSSSCCSCCCCCSGGGHH-HHHHHHHT
T ss_pred HHHHHHHHHhCCCCCCCCcccHHH-HHHHHHHH
Confidence 678889999999999999999776 46666654
No 472
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=30.57 E-value=40 Score=23.78 Aligned_cols=19 Identities=21% Similarity=0.251 Sum_probs=16.4
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+..++++++++++|++|++
T Consensus 81 ~df~~lv~~aH~~Gi~Vil 99 (480)
T 1ud2_A 81 AQLERAIGSLKSNDINVYG 99 (480)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 4678899999999999875
No 473
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=30.52 E-value=1e+02 Score=19.33 Aligned_cols=38 Identities=16% Similarity=0.288 Sum_probs=24.5
Q ss_pred HHHHHHHHHC-CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~-G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++. ..+++++|+...... ....-..|..+|+
T Consensus 97 ~~l~~~lr~~~~~~iI~lt~~~~~~~-~~~a~~~Ga~~yl 135 (249)
T 3q9s_A 97 GDVVQRLRKNSALPIIVLTARDTVEE-KVRLLGLGADDYL 135 (249)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCSHHH-HHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCCCEEEEECCCCHHH-HHHHHHCCCcEEE
Confidence 5677777653 588999998876553 3334455665554
No 474
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=30.48 E-value=51 Score=20.08 Aligned_cols=25 Identities=8% Similarity=0.117 Sum_probs=20.2
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
.....++++.+++.|.+++++|-.+
T Consensus 99 ~~~l~~~i~~~~~~~~~vil~~~~p 123 (240)
T 3mil_A 99 IDNIRQMVSLMKSYHIRPIIIGPGL 123 (240)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCC
Confidence 3567789999999999999998543
No 475
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=30.47 E-value=95 Score=20.54 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=22.4
Q ss_pred cChhHHHHHHHHHHCCCe-EEEEeCCCc-hhHHHHHHHH
Q 034147 49 LYPHAKGILEALKEKGIH-VAVASRSPA-PDIAKTFLHK 85 (103)
Q Consensus 49 ~~~g~~~~l~~l~~~G~~-v~i~T~~~~-~~i~~~~l~~ 85 (103)
+.+...++.+.+++.|+. +.+++..+. +. .....+.
T Consensus 135 p~ee~~~~~~~~~~~gl~~I~lvap~t~~er-i~~i~~~ 172 (271)
T 3nav_A 135 PTNESQPFVAAAEKFGIQPIFIAPPTASDET-LRAVAQL 172 (271)
T ss_dssp CGGGCHHHHHHHHHTTCEEEEEECTTCCHHH-HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCeEEEEECCCCCHHH-HHHHHHH
Confidence 445678888999999976 446665443 34 2444443
No 476
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=30.42 E-value=71 Score=17.58 Aligned_cols=23 Identities=26% Similarity=0.315 Sum_probs=16.8
Q ss_pred HHHHHHHHHC----CCeEEEEeCCCch
Q 034147 54 KGILEALKEK----GIHVAVASRSPAP 76 (103)
Q Consensus 54 ~~~l~~l~~~----G~~v~i~T~~~~~ 76 (103)
.++++++++. ..+++++|+....
T Consensus 63 ~~~~~~l~~~~~~~~~~ii~ls~~~~~ 89 (138)
T 3c3m_A 63 WETLERIKTDPATRDIPVLMLTAKPLT 89 (138)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEESSCCC
T ss_pred HHHHHHHHcCcccCCCCEEEEECCCCh
Confidence 5777888763 5789999987643
No 477
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=30.35 E-value=65 Score=16.98 Aligned_cols=38 Identities=16% Similarity=0.176 Sum_probs=23.7
Q ss_pred HHHHHHHHH-CCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKE-KGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~-~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++++++ ...+++++|+...... ....-+.|..+++
T Consensus 61 ~~~~~~l~~~~~~~ii~~s~~~~~~~-~~~~~~~g~~~~l 99 (121)
T 1zh2_A 61 IEFIRDLRQWSAVPVIVLSARSEESD-KIAALDAGADDYL 99 (121)
T ss_dssp HHHHHHHHTTCCCCEEEEESCCSHHH-HHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCCcEEEEECCCCHHH-HHHHHhcCCCeEE
Confidence 466777764 3578899998776552 3334456665544
No 478
>3oz7_A Phosphoglycerate kinase; transferase, ATP binding, glycolysi malaria parasite; 2.70A {Plasmodium falciparum} SCOP: c.86.1.1 PDB: 1ltk_A* 3oza_A
Probab=30.32 E-value=24 Score=25.19 Aligned_cols=24 Identities=21% Similarity=0.357 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHHCCCe-EEEEe--CCC
Q 034147 51 PHAKGILEALKEKGIH-VAVAS--RSP 74 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~-v~i~T--~~~ 74 (103)
..+...|++|.++|.+ ++++| ||+
T Consensus 43 ~aalpTI~~ll~~gak~Vil~SHlGRP 69 (417)
T 3oz7_A 43 TATLPTINHLKKEGASKIILISHCGRP 69 (417)
T ss_dssp HTTHHHHHHHHHHTCSEEEEECCCSCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEecCCCC
Confidence 4567899999999999 99999 454
No 479
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=30.26 E-value=66 Score=17.04 Aligned_cols=36 Identities=14% Similarity=0.059 Sum_probs=20.0
Q ss_pred HHHHHHHHHC----CCeEEEEeCCCchhHHHHHHHHcCCCCc
Q 034147 54 KGILEALKEK----GIHVAVASRSPAPDIAKTFLHKLGIHSM 91 (103)
Q Consensus 54 ~~~l~~l~~~----G~~v~i~T~~~~~~i~~~~l~~~~l~~~ 91 (103)
.++++++++. +.+++++ +...... .....+.|...+
T Consensus 66 ~~~~~~l~~~~~~~~~~ii~~-~~~~~~~-~~~~~~~g~~~~ 105 (127)
T 2gkg_A 66 YLICGKLKKDDDLKNVPIVII-GNPDGFA-QHRKLKAHADEY 105 (127)
T ss_dssp HHHHHHHHHSTTTTTSCEEEE-ECGGGHH-HHHHSTTCCSEE
T ss_pred HHHHHHHhcCccccCCCEEEE-ecCCchh-HHHHHHhCcchh
Confidence 5677777764 5778877 5443332 333334454443
No 480
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=30.14 E-value=42 Score=23.40 Aligned_cols=19 Identities=32% Similarity=0.576 Sum_probs=16.6
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+...+++++++++|++|++
T Consensus 70 ~df~~lv~~aH~~Gi~Vil 88 (441)
T 1lwj_A 70 REFKEMIEAFHDSGIKVVL 88 (441)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 5678899999999999875
No 481
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.14 E-value=58 Score=18.90 Aligned_cols=42 Identities=12% Similarity=0.253 Sum_probs=24.3
Q ss_pred hhHHHHHHHHHHCCC--eEEEEeCCC---chhH--HHHHHHHcCCCCcc
Q 034147 51 PHAKGILEALKEKGI--HVAVASRSP---APDI--AKTFLHKLGIHSMF 92 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~--~v~i~T~~~---~~~i--~~~~l~~~~l~~~~ 92 (103)
+.+.++++.|++.|. ..+++-|.. .... ....++..|.+.+|
T Consensus 69 ~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~ 117 (137)
T 1ccw_A 69 IDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVY 117 (137)
T ss_dssp HHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEEC
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEE
Confidence 456777888887764 223444543 1110 14568888987666
No 482
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=30.13 E-value=81 Score=21.94 Aligned_cols=23 Identities=17% Similarity=0.505 Sum_probs=20.1
Q ss_pred Ch-hHHHHHHHHHHCCCeEEEEeC
Q 034147 50 YP-HAKGILEALKEKGIHVAVASR 72 (103)
Q Consensus 50 ~~-g~~~~l~~l~~~G~~v~i~T~ 72 (103)
|| |+..+.++++++|.+++|-+.
T Consensus 72 FP~Gl~~l~~~i~~~Glk~Giw~~ 95 (397)
T 3a5v_A 72 FPRGIKPLVDDIHNLGLKAGIYSS 95 (397)
T ss_dssp CTTCHHHHHHHHHHTTCEEEEEEE
T ss_pred CCcCHHHHHHHHHHcCCEEEEEec
Confidence 44 599999999999999999873
No 483
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=30.08 E-value=76 Score=17.74 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=23.0
Q ss_pred CCceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHC
Q 034147 21 LPRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEK 63 (103)
Q Consensus 21 ~~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~ 63 (103)
.+.++++|-||.++.. .......+.+.++|+++.+.
T Consensus 109 ~P~~~lid~~G~i~~~-------~~g~~~~~~l~~~l~~~~~~ 144 (152)
T 2lja_A 109 IPRFILLDRDGKIISA-------NMTRPSDPKTAEKFNELLGL 144 (152)
T ss_dssp SCCEEEECTTSCEEES-------SCCCTTCHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCeEEEc-------cCCCCCHHHHHHHHHHHhcc
Confidence 4678899999998852 11122335677777776543
No 484
>1mji_A 50S ribosomal protein L5; ribosomal protein - 5S rRNA complex, ribosome; 2.50A {Thermus thermophilus} SCOP: d.77.1.1 PDB: 2hgj_G 2hgq_G 2hgu_G 2j01_G 2j03_G 2jl6_G 2jl8_G 2v47_G 2v49_G 2wdi_G 2wdj_G 2wdl_G 2wdn_G 2wh2_G 2wh4_G 2wrj_G 2wrl_G 2wro_G 2wrr_G 2x9s_G ...
Probab=30.06 E-value=64 Score=20.20 Aligned_cols=28 Identities=25% Similarity=0.485 Sum_probs=21.5
Q ss_pred HCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 62 EKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 62 ~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
-.|..+.|+|++....-+..++..+|++
T Consensus 152 i~GmdItivtta~td~ea~~LL~~~g~P 179 (182)
T 1mji_A 152 LRGMDIAVVTTAETDEEARALLELLGFP 179 (182)
T ss_dssp SCCEEEEEEESCSSHHHHHHHHHHHTCC
T ss_pred ccCceEEEEeccCCHHHHHHHHHHcCCc
Confidence 4588899998776544478899999974
No 485
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=30.02 E-value=41 Score=23.65 Aligned_cols=19 Identities=32% Similarity=0.489 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+..++++++++++|++|++
T Consensus 98 ~df~~lv~~~H~~Gi~Vil 116 (478)
T 2guy_A 98 DDLKALSSALHERGMYLMV 116 (478)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 5678899999999999975
No 486
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=30.01 E-value=1.1e+02 Score=20.26 Aligned_cols=37 Identities=11% Similarity=0.255 Sum_probs=27.3
Q ss_pred HHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 53 AKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 53 ~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+.++++.+++.+++++++-......+++.+.+..|..
T Consensus 226 l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~ 262 (291)
T 1pq4_A 226 LKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAG 262 (291)
T ss_dssp HHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCe
Confidence 5668888999999998887665555467766777753
No 487
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=29.99 E-value=84 Score=21.43 Aligned_cols=23 Identities=22% Similarity=0.537 Sum_probs=20.1
Q ss_pred Ch-hHHHHHHHHHHCCCeEEEEeC
Q 034147 50 YP-HAKGILEALKEKGIHVAVASR 72 (103)
Q Consensus 50 ~~-g~~~~l~~l~~~G~~v~i~T~ 72 (103)
|| |+..+.++++++|.+++|-+.
T Consensus 72 FP~Gl~~l~~~ih~~Glk~Giw~~ 95 (362)
T 1uas_A 72 FPSGIKALADYVHAKGLKLGIYSD 95 (362)
T ss_dssp CTTCHHHHHHHHHHTTCEEEEEEE
T ss_pred cCccHHHHHHHHHHCCCEeEEEee
Confidence 44 599999999999999999874
No 488
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=29.89 E-value=58 Score=22.51 Aligned_cols=49 Identities=8% Similarity=-0.013 Sum_probs=29.8
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEeCCC
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVASRSP 74 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T~~~ 74 (103)
.+.++.-+=|.++... .............+.+..+++.|++++|++|+.
T Consensus 4 ~k~iVIKiGGs~l~~~----~~~~~~~~l~~la~~Ia~l~~~G~~vVlV~gGg 52 (367)
T 2j5v_A 4 SQTLVVKLGTSVLTGG----SRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGA 52 (367)
T ss_dssp CCEEEEEECHHHHTTT----SSSCCHHHHHHHHHHHHHHHHTTCEEEEEECCH
T ss_pred CCEEEEEECcHHhcCC----CCCcCHHHHHHHHHHHHHHHhCCCcEEEEEcCH
Confidence 3456777777766421 001111233455667777888899999998875
No 489
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=29.82 E-value=65 Score=20.10 Aligned_cols=46 Identities=9% Similarity=0.041 Sum_probs=30.8
Q ss_pred CceEEEeCCCCcccccccccccCCCcccChhHHHHHHHHHHCCCeEEEEe
Q 034147 22 PRLVVFDLDYTLWPFYCECCYEDEIPYLYPHAKGILEALKEKGIHVAVAS 71 (103)
Q Consensus 22 ~~~~~fD~DGTL~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~G~~v~i~T 71 (103)
.-+++.|+=.-+.+.. .........+.+..+++..++.|++++.+.
T Consensus 13 tALlvID~Q~~f~~~~----~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~ 58 (208)
T 1yac_A 13 AAVLLVDHQAGLLSLV----RDIEPDKFKNNVLALGDLAKYFNLPTILTT 58 (208)
T ss_dssp EEEEEECCBTTGGGGC----CSSCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eEEEEEcCchhhhccc----ccccHHHHHHHHHHHHHHHHHcCCcEEEEE
Confidence 3467779988777521 111112355777888899999999988776
No 490
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=29.57 E-value=42 Score=23.70 Aligned_cols=19 Identities=26% Similarity=0.436 Sum_probs=16.2
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
....+++++++++|++|++
T Consensus 103 ~df~~Lv~~aH~~Gi~Vil 121 (488)
T 2wc7_A 103 EAFKELLDAAHQRNIKVVL 121 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 4578899999999999874
No 491
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=29.57 E-value=1e+02 Score=18.97 Aligned_cols=38 Identities=8% Similarity=0.128 Sum_probs=22.7
Q ss_pred HHHHHHHHHC-CCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 54 KGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 54 ~~~l~~l~~~-G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
.++++.+++. +.+++++|+...... ....-..|..+|+
T Consensus 65 ~~~~~~lr~~~~~~ii~lt~~~~~~~-~~~~~~~Ga~~~l 103 (238)
T 2gwr_A 65 IDVCRVLRADSGVPIVMLTAKTDTVD-VVLGLESGADDYI 103 (238)
T ss_dssp HHHHHHHHTTCCCCEEEEEETTCCSC-HHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCCCcEEEEeCCCCHHH-HHHHHHCCCCEEE
Confidence 4677777754 688999987664432 2233445655543
No 492
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=29.56 E-value=71 Score=19.61 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=27.4
Q ss_pred hhHHHHHHHH-HHCCCe-EEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEAL-KEKGIH-VAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l-~~~G~~-v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
++..+...++ +++|+. ++.+|..+... -..+.+..++.
T Consensus 65 ~~f~~~~~~f~~~~g~~~V~gvS~D~~~~-~~~~~~~~~~~ 104 (182)
T 1xiy_A 65 PGYEEEYDYFIKENNFDDIYCITNNDIYV-LKSWFKSMDIK 104 (182)
T ss_dssp HHHHHTHHHHHTTSCCSEEEEEESSCHHH-HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCCHHH-HHHHHHHcCCC
Confidence 3455667778 889995 88788887666 36777777763
No 493
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=29.46 E-value=73 Score=19.98 Aligned_cols=35 Identities=6% Similarity=-0.000 Sum_probs=25.4
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
|...++.++++++|+.++.+|..+... ...+++.+
T Consensus 77 p~l~~l~~~~~~~~v~vv~Is~D~~~~-~~~~~~~~ 111 (221)
T 2c0d_A 77 IEFNKHIKDFENKNVELLGISVDSVYS-HLAWKNMP 111 (221)
T ss_dssp HHHHHTHHHHHHTTEEEEEEESSCHHH-HHHHHHSC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHH-HHHHHHHh
Confidence 455566677777899999998866556 47777766
No 494
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=29.46 E-value=81 Score=20.23 Aligned_cols=37 Identities=22% Similarity=0.443 Sum_probs=26.8
Q ss_pred hhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCCCcc
Q 034147 51 PHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIHSMF 92 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~~~~ 92 (103)
+.+.+.++++++.|+.++|..+- +-...+++|+...+
T Consensus 141 ee~~~~i~~l~~~G~~vVVG~~~-----~~~~A~~~Gl~~vl 177 (225)
T 2pju_A 141 EDARGQINELKANGTEAVVGAGL-----ITDLAEEAGMTGIF 177 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEESHH-----HHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHHCCCCEEECCHH-----HHHHHHHcCCcEEE
Confidence 46788999999999999876322 34557788876543
No 495
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=29.45 E-value=87 Score=19.89 Aligned_cols=36 Identities=6% Similarity=-0.022 Sum_probs=26.1
Q ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHc
Q 034147 50 YPHAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKL 86 (103)
Q Consensus 50 ~~g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~ 86 (103)
.+...++.++++++|+.++.+|..+... ...+++.+
T Consensus 97 l~~l~~l~~~~~~~gv~vv~Is~D~~~~-~~~~~~~~ 132 (240)
T 3qpm_A 97 IIAFSDRVHEFRAINTEVVACSVDSQFT-HLAWIITP 132 (240)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEESSCHHH-HHHHHHSC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHH-HHHHHHHH
Confidence 3556667777888899998898777666 46666654
No 496
>3cpt_A Mitogen-activated protein kinase kinase 1- interacting protein 1; scaffold, complex, alpha/beta, endosome, membrane, lysosome; 1.90A {Homo sapiens} SCOP: d.110.7.1 PDB: 1sko_A 2zl1_A 1vet_A 1veu_A
Probab=29.35 E-value=40 Score=20.39 Aligned_cols=32 Identities=22% Similarity=0.123 Sum_probs=21.3
Q ss_pred HHHhhHHHHHHhhccCCCCceEEEeCCCCccc
Q 034147 4 LEKVKNEALEIIGQFENLPRLVVFDLDYTLWP 35 (103)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~fD~DGTL~~ 35 (103)
.+.+++-..+++.....-..+++.|-||+.+-
T Consensus 21 ~~~Lq~~L~~ll~rv~Gl~aI~ItDrDGVpi~ 52 (143)
T 3cpt_A 21 ADDLKRFLYKKLPSVEGLHAIVVSDRDGVPVI 52 (143)
T ss_dssp -CHHHHHHHHHGGGSTTEEEEEEECTTSCEEE
T ss_pred HHHHHHHHHHHHhccCCeEEEEEECCCCcEEE
Confidence 34556666666666554456677899999884
No 497
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=29.13 E-value=1.1e+02 Score=20.10 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHCCCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 52 HAKGILEALKEKGIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 52 g~~~~l~~l~~~G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
.+.++++.+++++++++++-.......++.+.+..|..
T Consensus 216 ~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~ 253 (286)
T 3gi1_A 216 QLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAK 253 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCe
Confidence 35678899999999998887665545467777777754
No 498
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=28.96 E-value=77 Score=17.72 Aligned_cols=38 Identities=8% Similarity=0.075 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHHC-CCeEEEEeCCCchhHHHHHHHHcCCC
Q 034147 51 PHAKGILEALKEK-GIHVAVASRSPAPDIAKTFLHKLGIH 89 (103)
Q Consensus 51 ~g~~~~l~~l~~~-G~~v~i~T~~~~~~i~~~~l~~~~l~ 89 (103)
+.+.+.++++.++ ++-++++|-.-...+ ...++++...
T Consensus 39 ee~~~~~~~l~~~~digIIlIte~ia~~i-~~~i~~~~~~ 77 (102)
T 2i4r_A 39 EEIVKAVEDVLKRDDVGVVIMKQEYLKKL-PPVLRREIDE 77 (102)
T ss_dssp HHHHHHHHHHHHCSSEEEEEEEGGGSTTS-CHHHHTTTTT
T ss_pred HHHHHHHHHHhhCCCeEEEEEeHHHHHHH-HHHHHHHHhC
Confidence 5678888887776 789999997776664 6667766553
No 499
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=28.96 E-value=45 Score=23.33 Aligned_cols=19 Identities=16% Similarity=0.267 Sum_probs=16.5
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+...+++++++++|++|++
T Consensus 87 ~df~~lv~~~H~~Gi~Vil 105 (435)
T 1mxg_A 87 EELVRLIQTAHAYGIKVIA 105 (435)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 5678899999999999975
No 500
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=28.91 E-value=45 Score=23.00 Aligned_cols=19 Identities=26% Similarity=0.485 Sum_probs=16.7
Q ss_pred hhHHHHHHHHHHCCCeEEE
Q 034147 51 PHAKGILEALKEKGIHVAV 69 (103)
Q Consensus 51 ~g~~~~l~~l~~~G~~v~i 69 (103)
+..++++++++++|++|++
T Consensus 69 ~d~~~lv~~~h~~Gi~Vil 87 (405)
T 1ht6_A 69 AELKSLIGALHGKGVQAIA 87 (405)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCCEEEE
Confidence 4578899999999999986
Done!