Your job contains 1 sequence.
>034153
MARGSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRF
YTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSAN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034153
(102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175108 - symbol:AT5G60460 "AT5G60460" species... 275 5.3e-24 1
TAIR|locus:2055567 - symbol:SEC61 BETA "AT2G45070" specie... 178 1.0e-13 1
TAIR|locus:2103376 - symbol:AT3G60540 "AT3G60540" species... 176 1.6e-13 1
DICTYBASE|DDB_G0278117 - symbol:sec61b "protein transport... 128 2.0e-08 1
FB|FBgn0010638 - symbol:Sec61beta "Sec61beta" species:722... 126 3.3e-08 1
UNIPROTKB|F1NWX7 - symbol:SEC61B "Uncharacterized protein... 124 5.3e-08 1
UNIPROTKB|Q2NKT5 - symbol:SEC61B "Sec61 beta subunit" spe... 124 5.3e-08 1
UNIPROTKB|P60467 - symbol:SEC61B "Protein transport prote... 124 5.3e-08 1
UNIPROTKB|P60468 - symbol:SEC61B "Protein transport prote... 124 5.3e-08 1
UNIPROTKB|F2Z5P0 - symbol:SEC61B "Uncharacterized protein... 124 5.3e-08 1
UNIPROTKB|Q5RB31 - symbol:SEC61B "Protein transport prote... 124 5.3e-08 1
MGI|MGI:1913462 - symbol:Sec61b "Sec61 beta subunit" spec... 124 5.3e-08 1
RGD|1304997 - symbol:Sec61b "Sec61 beta subunit" species:... 124 5.3e-08 1
ZFIN|ZDB-GENE-040718-260 - symbol:sec61b "Sec61 beta subu... 124 5.3e-08 1
WB|WBGene00021427 - symbol:Y38F2AR.9 species:6239 "Caenor... 118 2.3e-07 1
UNIPROTKB|G4N713 - symbol:MGG_03644 "Uncharacterized prot... 114 6.1e-07 1
GENEDB_PFALCIPARUM|MAL8P1.51 - symbol:MAL8P1.51 "protein-... 98 3.0e-05 1
UNIPROTKB|C0H4W6 - symbol:MAL8P1.51 "Sec61 beta subunit, ... 98 3.0e-05 1
POMBASE|SPBC2G2.03c - symbol:sbh1 "translocon beta subuni... 95 6.3e-05 1
SGD|S000002128 - symbol:SBH1 "Beta subunit of the Sec61p ... 95 6.3e-05 1
>TAIR|locus:2175108 [details] [associations]
symbol:AT5G60460 "AT5G60460" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015031 "protein
transport" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0005886 GO:GO:0005794
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB011483
HOGENOM:HOG000211109 KO:K09481 ProtClustDB:CLSN2683328
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
eggNOG:NOG282971 OMA:QRKGGAT EMBL:BT005455 EMBL:AK118120
IPI:IPI00536413 RefSeq:NP_200854.1 UniGene:At.43597
ProteinModelPortal:Q9FKK1 SMR:Q9FKK1 IntAct:Q9FKK1 STRING:Q9FKK1
PaxDb:Q9FKK1 PRIDE:Q9FKK1 EnsemblPlants:AT5G60460.1 GeneID:836167
KEGG:ath:AT5G60460 TAIR:At5g60460 InParanoid:Q9FKK1
PhylomeDB:Q9FKK1 ArrayExpress:Q9FKK1 Genevestigator:Q9FKK1
Uniprot:Q9FKK1
Length = 109
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 61/107 (57%), Positives = 64/107 (59%)
Query: 1 MARGXX----XXXXXXXXXRPGVVAPRGSAAATAGMXXXXXXXXXXXXXXXXXXXXXXXX 56
MARG RPG+ APRGSAAATAGM
Sbjct: 1 MARGSSQSQQSTSTGSSTARPGLAAPRGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSS 60
Query: 57 -MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSAN 102
MLRFYTDDAPGLKISPTVVL+MSLCFIGFVTALHVFGKLY HKS +
Sbjct: 61 NMLRFYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKLYLHKSGS 107
>TAIR|locus:2055567 [details] [associations]
symbol:SEC61 BETA "AT2G45070" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=ISS] [GO:0006457 "protein
folding" evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0015031
EMBL:Z26753 EMBL:BT000904 IPI:IPI00525929 PIR:T52378
RefSeq:NP_001031539.1 RefSeq:NP_001031540.1 RefSeq:NP_001078061.1
RefSeq:NP_182033.1 UniGene:At.25586 ProteinModelPortal:P38389
SMR:P38389 IntAct:P38389 STRING:P38389 PaxDb:P38389 PRIDE:P38389
EnsemblPlants:AT2G45070.1 EnsemblPlants:AT2G45070.2
EnsemblPlants:AT2G45070.3 EnsemblPlants:AT2G45070.4 GeneID:819114
KEGG:ath:AT2G45070 TAIR:At2g45070 eggNOG:NOG320639
HOGENOM:HOG000211109 InParanoid:P38389 KO:K09481 OMA:AAGSMLQ
PhylomeDB:P38389 ProtClustDB:CLSN2683328 Genevestigator:P38389
GermOnline:AT2G45070 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 Uniprot:P38389
Length = 82
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 43/80 (53%), Positives = 46/80 (57%)
Query: 18 GVVAP-RGSAAATAGMXXXXXXXXXXXXXXXXXXXXXXXXMLRFYTDDAPGLKISPTVVL 76
G AP RGSAAATA M ML+FYTDDAPGLKISP VVL
Sbjct: 3 GSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGS---MLQFYTDDAPGLKISPNVVL 59
Query: 77 LMSLCFIGFVTALHVFGKLY 96
+MS+ FI FV LHV GKLY
Sbjct: 60 IMSIGFIAFVAVLHVMGKLY 79
>TAIR|locus:2103376 [details] [associations]
symbol:AT3G60540 "AT3G60540" species:3702 "Arabidopsis
thaliana" [GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=ISS] [GO:0009627 "systemic
acquired resistance" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] Pfam:PF03911
PANTHER:PTHR13509 EMBL:CP002686 EMBL:AL138646 KO:K09481
ProtClustDB:CLSN2683328 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 IPI:IPI00530812 PIR:T47865 RefSeq:NP_191613.1
RefSeq:NP_974467.1 UniGene:At.34426 ProteinModelPortal:Q9M206
SMR:Q9M206 STRING:Q9M206 EnsemblPlants:AT3G60540.1
EnsemblPlants:AT3G60540.2 GeneID:825225 KEGG:ath:AT3G60540
TAIR:At3g60540 InParanoid:Q9M206 OMA:NAVLIMS PhylomeDB:Q9M206
Genevestigator:Q9M206 Uniprot:Q9M206
Length = 81
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 44/81 (54%), Positives = 47/81 (58%)
Query: 21 AP-RGSAAATAGMXXXXXXXXXXXXXXXXXXXXXXXXMLRFYTDDAPGLKISPTVVLLMS 79
AP RGSAAATA M ML+FYTDDAPGLKISP VVL+MS
Sbjct: 6 APQRGSAAATASMRRRKPAGGSSSAGGGAGT------MLQFYTDDAPGLKISPNVVLIMS 59
Query: 80 LCFIGFVTALHVFGKLYRHKS 100
+ FI FV LHV GKLY KS
Sbjct: 60 IGFIAFVAVLHVMGKLYFVKS 80
>DICTYBASE|DDB_G0278117 [details] [associations]
symbol:sec61b "protein transport protein SEC61 beta
subunit" species:44689 "Dictyostelium discoideum" [GO:0008565
"protein transporter activity" evidence=IC] [GO:0006613
"cotranslational protein targeting to membrane" evidence=ISS]
[GO:0005784 "Sec61 translocon complex" evidence=ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278117 Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GenomeReviews:CM000152_GR GO:GO:0008565
EMBL:AAFI02000023 GO:GO:0005784 GO:GO:0006613 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 RefSeq:XP_642138.1
STRING:Q54YR4 EnsemblProtists:DDB0235194 GeneID:8621346
KEGG:ddi:DDB_G0278117 eggNOG:NOG282971 OMA:VIILHIM Uniprot:Q54YR4
Length = 61
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M++FY++DA GLK+ PT VL MSL FI FV LH+ GK R
Sbjct: 20 MMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGKYTR 60
>FB|FBgn0010638 [details] [associations]
symbol:Sec61beta "Sec61beta" species:7227 "Drosophila
melanogaster" [GO:0006616 "SRP-dependent cotranslational protein
targeting to membrane, translocation" evidence=ISS] [GO:0005784
"Sec61 translocon complex" evidence=ISS;NAS] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0010507 "negative regulation of
autophagy" evidence=IMP] Pfam:PF03911 PANTHER:PTHR13509
EMBL:AE013599 GO:GO:0010507 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
OMA:GSGGMWR eggNOG:NOG282971 EMBL:AY071155 EMBL:BT050441
EMBL:AJ249754 RefSeq:NP_652037.1 UniGene:Dm.3305 SMR:Q7JZN0
IntAct:Q7JZN0 STRING:Q7JZN0 EnsemblMetazoa:FBtr0087498 GeneID:46080
KEGG:dme:Dmel_CG10130 UCSC:CG10130-RA CTD:46080 FlyBase:FBgn0010638
InParanoid:Q7JZN0 OrthoDB:EOG473N7Z GenomeRNAi:46080 NextBio:838730
Uniprot:Q7JZN0
Length = 100
Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 59 MWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNR 99
>UNIPROTKB|F1NWX7 [details] [associations]
symbol:SEC61B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA] [GO:0048408 "epidermal
growth factor binding" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
OMA:GSGGMWR EMBL:AADN02008307 IPI:IPI00603738
Ensembl:ENSGALT00000022088 Uniprot:F1NWX7
Length = 96
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 55 MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>UNIPROTKB|Q2NKT5 [details] [associations]
symbol:SEC61B "Sec61 beta subunit" species:9913 "Bos
taurus" [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=IDA] [GO:0048408 "epidermal growth factor binding"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 GO:GO:0031205
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OMA:GSGGMWR
OrthoDB:EOG4STS6D eggNOG:NOG282971 EMBL:DAAA02023273 EMBL:BC111652
IPI:IPI00714767 RefSeq:NP_001068760.1 UniGene:Bt.4410 STRING:Q2NKT5
Ensembl:ENSBTAT00000003190 GeneID:506986 KEGG:bta:506986
InParanoid:Q2NKT5 NextBio:20867841 Uniprot:Q2NKT5
Length = 96
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 55 MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>UNIPROTKB|P60467 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9615 "Canis lupus familiaris" [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=TAS] [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=ISS] [GO:0048408 "epidermal growth factor binding"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Reactome:REACT_93968 Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GO:GO:0000060 Reactome:REACT_103209 GO:GO:0030433
GO:GO:0030970 GO:GO:0031205 GO:GO:0015450 PDB:2WWB PDBsum:2WWB
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 EMBL:L25052 PIR:S42409
RefSeq:NP_001003326.1 UniGene:Cfa.3895 ProteinModelPortal:P60467
SMR:P60467 STRING:P60467 PRIDE:P60467 Ensembl:ENSCAFT00000003996
GeneID:404018 KEGG:cfa:404018 CTD:10952 eggNOG:NOG248540
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 InParanoid:P60467
OMA:GSGGMWR OrthoDB:EOG4STS6D EvolutionaryTrace:P60467
NextBio:20817505 Uniprot:P60467
Length = 96
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 55 MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>UNIPROTKB|P60468 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9606 "Homo sapiens" [GO:0048408 "epidermal growth
factor binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0030433 "ER-associated protein catabolic process"
evidence=IDA] [GO:0031205 "endoplasmic reticulum Sec complex"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=NAS]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IMP] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IMP] [GO:0002474 "antigen processing and
presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0006412 "translation" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0042590 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_17015
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021 Reactome:REACT_6900
GO:GO:0002479 GO:GO:0006412 GO:GO:0000060 GO:GO:0030433
EMBL:AL137067 TCDB:3.A.5.9.1 GO:GO:0030970 GO:GO:0031205
GO:GO:0006614 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952 eggNOG:NOG248540
HOVERGEN:HBG061281 OMA:GSGGMWR OrthoDB:EOG4STS6D EMBL:L25085
EMBL:CR456883 EMBL:BC001734 IPI:IPI00220835 PIR:S42410
RefSeq:NP_006799.1 UniGene:Hs.191887 ProteinModelPortal:P60468
SMR:P60468 DIP:DIP-40997N IntAct:P60468 MINT:MINT-106933
STRING:P60468 PhosphoSite:P60468 DMDM:42560366 PaxDb:P60468
PeptideAtlas:P60468 PRIDE:P60468 Ensembl:ENST00000223641
GeneID:10952 KEGG:hsa:10952 UCSC:uc004azh.3 GeneCards:GC09P101984
HGNC:HGNC:16993 HPA:HPA049407 MIM:609214 neXtProt:NX_P60468
PharmGKB:PA134888963 InParanoid:P60468 PhylomeDB:P60468
GenomeRNAi:10952 NextBio:41613 Bgee:P60468 CleanEx:HS_SEC61B
Genevestigator:P60468 GermOnline:ENSG00000106803 Uniprot:P60468
Length = 96
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 55 MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>UNIPROTKB|F2Z5P0 [details] [associations]
symbol:SEC61B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048408 "epidermal growth factor binding" evidence=IEA]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0000060 GO:GO:0030433 GO:GO:0030970 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 OMA:GSGGMWR EMBL:CU861555
RefSeq:NP_001230754.1 UniGene:Ssc.3932 ProteinModelPortal:F2Z5P0
SMR:F2Z5P0 PRIDE:F2Z5P0 Ensembl:ENSSSCT00000005924 GeneID:100511362
KEGG:ssc:100511362 Uniprot:F2Z5P0
Length = 96
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 55 MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>UNIPROTKB|Q5RB31 [details] [associations]
symbol:SEC61B "Protein transport protein Sec61 subunit
beta" species:9601 "Pongo abelii" [GO:0031205 "endoplasmic
reticulum Sec complex" evidence=ISS] Pfam:PF03911 PANTHER:PTHR13509
GO:GO:0016021 GO:GO:0000060 GO:GO:0030433 GO:GO:0030970
GO:GO:0031205 KO:K09481 InterPro:IPR005609 InterPro:IPR016482
PIRSF:PIRSF006398 CTD:10952 GeneTree:ENSGT00390000003561
HOVERGEN:HBG061281 OMA:GSGGMWR EMBL:CR858826 RefSeq:NP_001129010.1
UniGene:Pab.19781 ProteinModelPortal:Q5RB31 SMR:Q5RB31 PRIDE:Q5RB31
Ensembl:ENSPPYT00000022675 GeneID:100190850 KEGG:pon:100190850
InParanoid:Q5RB31 Uniprot:Q5RB31
Length = 96
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 55 MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>MGI|MGI:1913462 [details] [associations]
symbol:Sec61b "Sec61 beta subunit" species:10090 "Mus
musculus" [GO:0000060 "protein import into nucleus, translocation"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0030970
"retrograde protein transport, ER to cytosol" evidence=ISO]
[GO:0043022 "ribosome binding" evidence=IDA] [GO:0048408 "epidermal
growth factor binding" evidence=ISO] MGI:MGI:1913462 Pfam:PF03911
PANTHER:PTHR13509 GO:GO:0016021 GO:GO:0005789 GO:GO:0015031
GO:GO:0043022 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OrthoDB:EOG4STS6D
eggNOG:NOG282971 EMBL:AK004505 EMBL:AK008739 EMBL:BC002089
EMBL:BC081445 IPI:IPI00133030 RefSeq:NP_077133.1 UniGene:Mm.20188
ProteinModelPortal:Q9CQS8 SMR:Q9CQS8 IntAct:Q9CQS8 STRING:Q9CQS8
PhosphoSite:Q9CQS8 PaxDb:Q9CQS8 PRIDE:Q9CQS8
Ensembl:ENSMUST00000065678 GeneID:66212 KEGG:mmu:66212
InParanoid:Q9CQS8 ChiTaRS:SEC61B NextBio:320979 Bgee:Q9CQS8
CleanEx:MM_SEC61B Genevestigator:Q9CQS8
GermOnline:ENSMUSG00000053317 Uniprot:Q9CQS8
Length = 96
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 55 MWRFYTEDSPGLKVGPVPVLVMSLLFIAAVFMLHIWGKYTR 95
>RGD|1304997 [details] [associations]
symbol:Sec61b "Sec61 beta subunit" species:10116 "Rattus
norvegicus" [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA;ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA;ISO] [GO:0043022 "ribosome binding" evidence=ISO]
[GO:0048408 "epidermal growth factor binding" evidence=IEA;ISO]
RGD:1304997 Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0000060
GO:GO:0030433 GO:GO:0030970 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952
eggNOG:NOG248540 GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281
OrthoDB:EOG4STS6D EMBL:BC167110 EMBL:CH474056 IPI:IPI00364983
RefSeq:NP_001100124.1 UniGene:Rn.103030 MINT:MINT-7138994
STRING:B2RZD1 Ensembl:ENSRNOT00000008329 GeneID:298068
KEGG:rno:298068 UCSC:RGD:1304997 NextBio:643084
Genevestigator:B2RZD1 Uniprot:B2RZD1
Length = 96
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 55 MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>ZFIN|ZDB-GENE-040718-260 [details] [associations]
symbol:sec61b "Sec61 beta subunit" species:7955
"Danio rerio" [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF03911 ZFIN:ZDB-GENE-040718-260 PANTHER:PTHR13509
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 CTD:10952 eggNOG:NOG248540
GeneTree:ENSGT00390000003561 HOVERGEN:HBG061281 OMA:GSGGMWR
OrthoDB:EOG4STS6D EMBL:CU914485 EMBL:BC076372 IPI:IPI00503730
RefSeq:NP_001002527.1 UniGene:Dr.75889 STRING:Q6DGH3
Ensembl:ENSDART00000059013 GeneID:791986 KEGG:dre:791986
NextBio:20930874 Uniprot:Q6DGH3
Length = 97
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 56 MWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 96
>WB|WBGene00021427 [details] [associations]
symbol:Y38F2AR.9 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF03911
PANTHER:PTHR13509 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 GeneTree:ENSGT00390000003561
eggNOG:NOG282971 EMBL:FO080872 RefSeq:NP_500197.1
ProteinModelPortal:Q95XS2 SMR:Q95XS2 STRING:Q95XS2 PaxDb:Q95XS2
EnsemblMetazoa:Y38F2AR.9.1 EnsemblMetazoa:Y38F2AR.9.2 GeneID:177027
KEGG:cel:CELE_Y38F2AR.9 UCSC:Y38F2AR.9.1 CTD:177027
WormBase:Y38F2AR.9 InParanoid:Q95XS2 OMA:QRKGGAT NextBio:895028
Uniprot:Q95XS2
Length = 81
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 59 RFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
RFYT+D+ GLKI P VL+MSL FI V LH++GK R ++
Sbjct: 40 RFYTEDSTGLKIGPVPVLVMSLVFIASVFVLHIWGKFTRSRA 81
>UNIPROTKB|G4N713 [details] [associations]
symbol:MGG_03644 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] Pfam:PF03911 PANTHER:PTHR13509 EMBL:CM001234 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 RefSeq:XP_003716245.1
EnsemblFungi:MGG_03644T0 GeneID:2676629 KEGG:mgr:MGG_03644
Uniprot:G4N713
Length = 144
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
MLR YTD++PGLK+ P VVL++SL FI V ALH
Sbjct: 69 MLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALH 102
>GENEDB_PFALCIPARUM|MAL8P1.51 [details] [associations]
symbol:MAL8P1.51 "protein-transport protein
sec61 beta 1 subunit, putative" species:5833 "Plasmodium
falciparum" [GO:0005784 "Sec61 translocon complex" evidence=ISS]
[GO:0008565 "protein transporter activity" evidence=ISS]
[GO:0006886 "intracellular protein transport" evidence=ISS]
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0008565 GO:GO:0005784
EMBL:AL844507 HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 RefSeq:XP_002808866.1
ProteinModelPortal:C0H4W6 EnsemblProtists:MAL8P1.51:mRNA
GeneID:2655350 KEGG:pfa:MAL8P1.51 EuPathDB:PlasmoDB:PF3D7_0821800
ProtClustDB:CLSZ2431987 Uniprot:C0H4W6
Length = 80
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
+++FY DD+PG K++P VL+ +L F+ V LH+ K+
Sbjct: 42 IVKFYGDDSPGFKLTPQTVLISTLIFMASVVILHIISKI 80
>UNIPROTKB|C0H4W6 [details] [associations]
symbol:MAL8P1.51 "Sec61 beta subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005784 "Sec61
translocon complex" evidence=ISS] [GO:0008565 "protein transporter
activity" evidence=ISS] [GO:0015031 "protein transport"
evidence=ISS] Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0008565
GO:GO:0005784 EMBL:AL844507 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
RefSeq:XP_002808866.1 ProteinModelPortal:C0H4W6
EnsemblProtists:MAL8P1.51:mRNA GeneID:2655350 KEGG:pfa:MAL8P1.51
EuPathDB:PlasmoDB:PF3D7_0821800 ProtClustDB:CLSZ2431987
Uniprot:C0H4W6
Length = 80
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
+++FY DD+PG K++P VL+ +L F+ V LH+ K+
Sbjct: 42 IVKFYGDDSPGFKLTPQTVLISTLIFMASVVILHIISKI 80
>POMBASE|SPBC2G2.03c [details] [associations]
symbol:sbh1 "translocon beta subunit Sbh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005784 "Sec61 translocon complex"
evidence=ISO] [GO:0006616 "SRP-dependent cotranslational protein
targeting to membrane, translocation" evidence=ISO] [GO:0006620
"posttranslational protein targeting to membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=ISO] PomBase:SPBC2G2.03c
Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005784 GO:GO:0006620 GO:GO:0006616
HOGENOM:HOG000211109 KO:K09481 InterPro:IPR005609
InterPro:IPR016482 PIRSF:PIRSF006398 PIR:T40142 RefSeq:NP_596432.1
STRING:O43002 PRIDE:O43002 EnsemblFungi:SPBC2G2.03c.1
GeneID:2540282 KEGG:spo:SPBC2G2.03c eggNOG:NOG330120 OMA:YTDEANG
OrthoDB:EOG4SXRPB NextBio:20801412 Uniprot:O43002
Length = 102
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
+L+ YTD+A G K+ P VV+++S+ FI V LH+ ++ +
Sbjct: 57 LLKLYTDEASGFKVDPVVVMVLSVGFIASVFLLHIVARILK 97
>SGD|S000002128 [details] [associations]
symbol:SBH1 "Beta subunit of the Sec61p ER translocation
complex" species:4932 "Saccharomyces cerevisiae" [GO:0031204
"posttranslational protein targeting to membrane, translocation"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0015450 "P-P-bond-hydrolysis-driven protein
transmembrane transporter activity" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005784 "Sec61 translocon complex" evidence=IDA] [GO:0006616
"SRP-dependent cotranslational protein targeting to membrane,
translocation" evidence=IMP] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=IDA]
SGD:S000002128 Pfam:PF03911 PANTHER:PTHR13509 GO:GO:0016021
EMBL:BK006939 EMBL:U18839 GO:GO:0005784 GO:GO:0005086 GO:GO:0031204
GO:GO:0006616 KO:K00549 RefSeq:NP_011015.3 GeneID:856825
KEGG:sce:YER091C TCDB:3.A.5.8.1 HOGENOM:HOG000211109 KO:K09481
InterPro:IPR005609 InterPro:IPR016482 PIRSF:PIRSF006398
OrthoDB:EOG4SXRPB EMBL:Z47789 PIR:S68162 RefSeq:NP_011011.3
ProteinModelPortal:P52870 SMR:P52870 DIP:DIP-5681N IntAct:P52870
MINT:MINT-529808 STRING:P52870 EnsemblFungi:YER087C-B GeneID:856821
KEGG:sce:YER087C-B CYGD:YER087c-b eggNOG:NOG307236
GeneTree:ENSGT00390000015774 NextBio:983103 Genevestigator:P52870
GermOnline:YER087C-B Uniprot:P52870
Length = 82
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
+L+ Y+D+A GL++ P VVL +++ FI V ALHV K+
Sbjct: 39 ILKIYSDEATGLRVDPLVVLFLAVGFIFSVVALHVISKV 77
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.140 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 102 67 0.00091 102 3 11 22 0.36 28
29 0.49 28
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 439 (47 KB)
Total size of DFA: 74 KB (2062 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 5.86u 0.22s 6.08t Elapsed: 00:00:01
Total cpu time: 5.86u 0.22s 6.08t Elapsed: 00:00:01
Start: Fri May 10 16:16:47 2013 End: Fri May 10 16:16:48 2013