BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034153
(102 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297746234|emb|CBI16290.3| unnamed protein product [Vitis vinifera]
Length = 699
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/103 (76%), Positives = 88/103 (85%), Gaps = 3/103 (2%)
Query: 1 MARGSSQSSTSS-ATSRPGVV--APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNM 57
MARGSSQS S+ ATSRPG V APRG+AAATAGMRRRRV G SG S GG G+ +NM
Sbjct: 593 MARGSSQSQASTTATSRPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGSNM 652
Query: 58 LRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
LRFYTDDAPGLKI+PTVVL+MSLCFIGFVTALHVFGK+YR+K+
Sbjct: 653 LRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRYKA 695
>gi|255570845|ref|XP_002526375.1| Protein transport protein Sec61 subunit beta, putative [Ricinus
communis]
gi|223534334|gb|EEF36046.1| Protein transport protein Sec61 subunit beta, putative [Ricinus
communis]
Length = 106
Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 76/88 (86%), Gaps = 3/88 (3%)
Query: 16 RPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVG--GAGASTNMLRFYTDDAPGLKISPT 73
RPGV APRGSAAATAGMRRRR+ GSS +G+ S G G STNMLRFYTDDAPGLKISPT
Sbjct: 17 RPGVAAPRGSAAATAGMRRRRL-GSSASGATSTAASGIGNSTNMLRFYTDDAPGLKISPT 75
Query: 74 VVLLMSLCFIGFVTALHVFGKLYRHKSA 101
VVL+MSLCFIGFVTALHVFGKLYR K A
Sbjct: 76 VVLVMSLCFIGFVTALHVFGKLYRSKVA 103
>gi|225435271|ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis
vinifera]
Length = 107
Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/103 (76%), Positives = 88/103 (85%), Gaps = 3/103 (2%)
Query: 1 MARGSSQSSTSS-ATSRPGVV--APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNM 57
MARGSSQS S+ ATSRPG V APRG+AAATAGMRRRRV G SG S GG G+ +NM
Sbjct: 1 MARGSSQSQASTTATSRPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGSNM 60
Query: 58 LRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
LRFYTDDAPGLKI+PTVVL+MSLCFIGFVTALHVFGK+YR+K+
Sbjct: 61 LRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRYKA 103
>gi|356539126|ref|XP_003538051.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Glycine max]
Length = 107
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 88/103 (85%), Gaps = 2/103 (1%)
Query: 1 MARGSSQSST--SSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNML 58
MARG+SQS + S AT+RPGV+APRG+AAATAGMRRRR+ G + + S S G +NML
Sbjct: 1 MARGASQSQSTASHATTRPGVMAPRGTAAATAGMRRRRLGGGTSSASVSGGSGAGGSNML 60
Query: 59 RFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
RFYTDDAPGLKISPTVVL+MSLCFIGFVTALHVFGKLYR++S+
Sbjct: 61 RFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRYRSS 103
>gi|116790817|gb|ABK25751.1| unknown [Picea sitchensis]
gi|116791539|gb|ABK26018.1| unknown [Picea sitchensis]
gi|224286463|gb|ACN40938.1| unknown [Picea sitchensis]
Length = 108
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 81/105 (77%), Gaps = 5/105 (4%)
Query: 1 MARGSSQSSTSSATSR--PGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGAST--- 55
MARGSSQS +S SR P APRGSAAATAG+RRRR T SG G GG G S
Sbjct: 1 MARGSSQSQAASVVSRAGPTGAAPRGSAAATAGLRRRRTTSGSGGGGSGGGGFGGSGGGS 60
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
NMLRFYTDDAPGLKI+PTVVL+MSLCFIGFVTALHV GKLYR++S
Sbjct: 61 NMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVIGKLYRYRS 105
>gi|449463643|ref|XP_004149541.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Cucumis sativus]
gi|449533016|ref|XP_004173473.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Cucumis sativus]
Length = 109
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/88 (75%), Positives = 73/88 (82%), Gaps = 2/88 (2%)
Query: 16 RPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSV--GGAGASTNMLRFYTDDAPGLKISPT 73
RPGVVAPRGSAAATAG+RRRR +S + S + GG+ NMLRFYTDDAPGLKISPT
Sbjct: 19 RPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPT 78
Query: 74 VVLLMSLCFIGFVTALHVFGKLYRHKSA 101
VVL+MSLCFIGFVT LHVFGKLYR +SA
Sbjct: 79 VVLVMSLCFIGFVTGLHVFGKLYRARSA 106
>gi|15239337|ref|NP_200854.1| protein transport protein SEC61 subunit beta [Arabidopsis thaliana]
gi|9757748|dbj|BAB08229.1| unnamed protein product [Arabidopsis thaliana]
gi|26451290|dbj|BAC42746.1| protein transport protein subunit - like [Arabidopsis thaliana]
gi|28973101|gb|AAO63875.1| putative protein transport protein subunit [Arabidopsis thaliana]
gi|332009950|gb|AED97333.1| protein transport protein SEC61 subunit beta [Arabidopsis thaliana]
Length = 109
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/87 (78%), Positives = 74/87 (85%), Gaps = 1/87 (1%)
Query: 15 SRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGAST-NMLRFYTDDAPGLKISPT 73
+RPG+ APRGSAAATAGMRRRR+ G G SG G G+ + NMLRFYTDDAPGLKISPT
Sbjct: 19 ARPGLAAPRGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSSNMLRFYTDDAPGLKISPT 78
Query: 74 VVLLMSLCFIGFVTALHVFGKLYRHKS 100
VVL+MSLCFIGFVTALHVFGKLY HKS
Sbjct: 79 VVLIMSLCFIGFVTALHVFGKLYLHKS 105
>gi|357441565|ref|XP_003591060.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
gi|355480108|gb|AES61311.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
Length = 114
Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
Query: 13 ATSRPGVVAPRGSAAATAGMRRRRVTG-SSGNGSGSVGGAGASTNMLRFYTDDAPGLKIS 71
AT+RPGV+APRGSAAATAGMRRRR TG ++ + + + G + NMLRFYTDDAPGLKIS
Sbjct: 16 ATTRPGVMAPRGSAAATAGMRRRRPTGGNTTSSTSAAGSSSGGNNMLRFYTDDAPGLKIS 75
Query: 72 PTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
PTVVL+MSL FIGFVT LHVFGKLYR++S
Sbjct: 76 PTVVLVMSLGFIGFVTMLHVFGKLYRYQS 104
>gi|357453827|ref|XP_003597194.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
gi|87241202|gb|ABD33060.1| Sec61beta [Medicago truncatula]
gi|355486242|gb|AES67445.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
Length = 107
Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 74/84 (88%), Gaps = 3/84 (3%)
Query: 18 GVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGAST-NMLRFYTDDAPGLKISPTVVL 76
G+ APRGSAAATAGMRRRR+T SGN + SVGG + NMLRFYTDDAPGLKISPTVVL
Sbjct: 22 GLAAPRGSAAATAGMRRRRLT--SGNSTASVGGGSSGGSNMLRFYTDDAPGLKISPTVVL 79
Query: 77 LMSLCFIGFVTALHVFGKLYRHKS 100
+MSLCFIGFVTALHVFGKLYR+K+
Sbjct: 80 VMSLCFIGFVTALHVFGKLYRYKA 103
>gi|225449090|ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis
vinifera]
gi|147800942|emb|CAN75561.1| hypothetical protein VITISV_032577 [Vitis vinifera]
Length = 108
Score = 118 bits (296), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/104 (73%), Positives = 83/104 (79%), Gaps = 4/104 (3%)
Query: 1 MARGSSQSSTSS-ATSRPGVV--APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGAST-N 56
M RGSSQS SS TSRP V APRGSAAATAGMRRRR+ S G G+G+S N
Sbjct: 1 MVRGSSQSQASSSVTSRPSTVGMAPRGSAAATAGMRRRRLGTGSAGGGSGGFGSGSSGSN 60
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
MLRFYTDDAPGLKI+PTVVL+MSLCFIGFVTALHVFGK+YRH+S
Sbjct: 61 MLRFYTDDAPGLKITPTVVLVMSLCFIGFVTALHVFGKIYRHRS 104
>gi|356550214|ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Glycine max]
Length = 105
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 82/103 (79%), Gaps = 5/103 (4%)
Query: 1 MARGSSQSSTSSAT-SRPGV--VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNM 57
MARGSSQS +S++T +RPG +APRGSAAATA RR GN S S G G S+NM
Sbjct: 1 MARGSSQSQSSTSTATRPGPAGMAPRGSAAATA--GMRRRRLGGGNSSASTGVGGGSSNM 58
Query: 58 LRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
LRFYTDDAPGLKISPTVVL+MSLCFIGFVTALHVFGKLYR KS
Sbjct: 59 LRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKS 101
>gi|356543444|ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Glycine max]
Length = 105
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/103 (72%), Positives = 82/103 (79%), Gaps = 5/103 (4%)
Query: 1 MARGSSQSSTSSAT-SRPGV--VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNM 57
MARGSSQS +S++T +RPG +APRGSAAATA RR GN S S G G S+NM
Sbjct: 1 MARGSSQSQSSTSTATRPGPAGMAPRGSAAATA--GMRRRRLGGGNSSASTGVGGGSSNM 58
Query: 58 LRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
LRFYTDDAPGLKISPTVVL+MSLCFIGFVTALHVFGKLYR KS
Sbjct: 59 LRFYTDDAPGLKISPTVVLVMSLCFIGFVTALHVFGKLYRSKS 101
>gi|326507890|dbj|BAJ86688.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 110
Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 77/100 (77%), Gaps = 5/100 (5%)
Query: 1 MARGSSQSSTSSA----TSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTN 56
MAR SSQS +S A SRP V PRG+AAATAGMRRR +S +G+G GG N
Sbjct: 1 MARTSSQSQSSVAGTAGASRPATVGPRGTAAATAGMRRR-PGRTSSSGAGGGGGFSGGNN 59
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
MLRFYTD+APGL++SPT+VL+MS+CFIGFVTALHVFGKLY
Sbjct: 60 MLRFYTDEAPGLRLSPTMVLVMSVCFIGFVTALHVFGKLY 99
>gi|326493290|dbj|BAJ85106.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519422|dbj|BAJ96710.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531688|dbj|BAJ97848.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 111
Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 68/90 (75%)
Query: 12 SATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKIS 71
+A SRP PRG+ AATAGMRRR SS G +G NMLRFYTD+APGL++S
Sbjct: 17 AAGSRPATAGPRGTPAATAGMRRRPGRTSSSASGGGGFSSGGGNNMLRFYTDEAPGLRLS 76
Query: 72 PTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
PT+VL+MS+CFIGFVTALHVFGKLYR ++A
Sbjct: 77 PTMVLVMSVCFIGFVTALHVFGKLYRSRTA 106
>gi|357157730|ref|XP_003577895.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Brachypodium distachyon]
Length = 112
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 75/101 (74%), Gaps = 5/101 (4%)
Query: 1 MARGSSQSSTS-----SATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGAST 55
MAR SSQS +S A SRP PRG+ AATAGMRRR SS + SG+ GG
Sbjct: 1 MARTSSQSQSSVAGAGGAGSRPATAGPRGTPAATAGMRRRPGRASSSSSSGAGGGFSGGN 60
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
NMLRFYTD+APGL++SPT+VL+MSLCFIGFVTALHVFGKLY
Sbjct: 61 NMLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHVFGKLY 101
>gi|297796995|ref|XP_002866382.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312217|gb|EFH42641.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 109
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/86 (76%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Query: 16 RPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGAST-NMLRFYTDDAPGLKISPTV 74
RPG+ APRGSAAATAGMRRRR+ G SG AG+ + NMLRFYTD+APGLKISPTV
Sbjct: 20 RPGLSAPRGSAAATAGMRRRRLGGGGSVSSGGGSAAGSGSGNMLRFYTDEAPGLKISPTV 79
Query: 75 VLLMSLCFIGFVTALHVFGKLYRHKS 100
VL+MSLCFIGFVTALHVFGKLY HKS
Sbjct: 80 VLIMSLCFIGFVTALHVFGKLYLHKS 105
>gi|302770086|ref|XP_002968462.1| hypothetical protein SELMODRAFT_39587 [Selaginella moellendorffii]
gi|300164106|gb|EFJ30716.1| hypothetical protein SELMODRAFT_39587 [Selaginella moellendorffii]
Length = 76
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 60/79 (75%), Gaps = 6/79 (7%)
Query: 22 PRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLC 81
PRG+A +G+RRRR + SG GS NMLRFYTDDAPGLKI+PT+VL+MSLC
Sbjct: 4 PRGAAGNASGLRRRRASSGSGGFGGS------GGNMLRFYTDDAPGLKITPTMVLVMSLC 57
Query: 82 FIGFVTALHVFGKLYRHKS 100
FIGFVTALHV GKLY +KS
Sbjct: 58 FIGFVTALHVVGKLYHYKS 76
>gi|302774438|ref|XP_002970636.1| hypothetical protein SELMODRAFT_93776 [Selaginella moellendorffii]
gi|300162152|gb|EFJ28766.1| hypothetical protein SELMODRAFT_93776 [Selaginella moellendorffii]
Length = 101
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 69/106 (65%), Gaps = 10/106 (9%)
Query: 1 MARGSSQSSTSSATSRPGVVAPRGSAAAT----AGMRRRRVTGSSGNGSGSVGGAGASTN 56
MA+G+SQS +++ G +G+RRRR + SG GS N
Sbjct: 1 MAKGASQSQQAASVVAAGRGGAGSGPRGAAGNASGLRRRRASSGSGGFGGS------GGN 54
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSAN 102
MLRFYTDDAPGLKI+PT+VL+MSLCFIGFVTALHV GKLY +KSA+
Sbjct: 55 MLRFYTDDAPGLKITPTMVLVMSLCFIGFVTALHVVGKLYHYKSAS 100
>gi|108947527|gb|ABG24204.1| putative transport protein [Gymnadenia conopsea]
Length = 107
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/45 (93%), Positives = 45/45 (100%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
NMLRFYTDDAPGLK+SPTVVL+MSLCFIGFVTALHVFGKLYR+KS
Sbjct: 60 NMLRFYTDDAPGLKMSPTVVLVMSLCFIGFVTALHVFGKLYRYKS 104
>gi|449431966|ref|XP_004133771.1| PREDICTED: protein transport protein Sec61 subunit beta-like
isoform 1 [Cucumis sativus]
gi|449431968|ref|XP_004133772.1| PREDICTED: protein transport protein Sec61 subunit beta-like
isoform 2 [Cucumis sativus]
gi|449431970|ref|XP_004133773.1| PREDICTED: protein transport protein Sec61 subunit beta-like
isoform 3 [Cucumis sativus]
Length = 82
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MRRRR T S +G GA+ ML+FYTDDAPGLKISP VVL+MS+ F
Sbjct: 10 RGSAAATASMRRRRTTSSGTSG-------GAAGTMLQFYTDDAPGLKISPNVVLVMSIGF 62
Query: 83 IGFVTALHVFGKLY 96
I FV LHV GKLY
Sbjct: 63 IAFVAVLHVMGKLY 76
>gi|118481659|gb|ABK92771.1| unknown [Populus trichocarpa]
Length = 106
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/44 (90%), Positives = 43/44 (97%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHK 99
NMLRFYTDDAPGLKISPT+VL++SLCFIGFVTALHVFGKLYR K
Sbjct: 60 NMLRFYTDDAPGLKISPTIVLVISLCFIGFVTALHVFGKLYRSK 103
>gi|297727869|ref|NP_001176298.1| Os11g0103900 [Oryza sativa Japonica Group]
gi|77548256|gb|ABA91053.1| Sec61beta family protein, expressed [Oryza sativa Japonica Group]
gi|215769382|dbj|BAH01611.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255679685|dbj|BAH95026.1| Os11g0103900 [Oryza sativa Japonica Group]
Length = 107
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 45/46 (97%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
NMLRFYTD+APGL++SPT+VL+MSLCFIGFVTALHVFGKLYR ++A
Sbjct: 57 NMLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHVFGKLYRSRTA 102
>gi|413942257|gb|AFW74906.1| hypothetical protein ZEAMMB73_465064, partial [Zea mays]
Length = 55
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
Query: 50 GAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
GAG S NMLRFYTD+APGL++SPT+VL+MSLCFIGFVTALH+FGKLYR ++A
Sbjct: 1 GAGGS-NMLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHIFGKLYRSRTA 51
>gi|77552788|gb|ABA95584.1| Sec61beta family protein, expressed [Oryza sativa Japonica Group]
Length = 107
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 45/46 (97%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
NMLRFYTD+APGL++SPT+VL+MSLCFIGFVTALHVFGKLYR ++A
Sbjct: 57 NMLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHVFGKLYRSRTA 102
>gi|297728763|ref|NP_001176745.1| Os12g0103300 [Oryza sativa Japonica Group]
gi|255669958|dbj|BAH95473.1| Os12g0103300, partial [Oryza sativa Japonica Group]
Length = 102
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 45/46 (97%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
NMLRFYTD+APGL++SPT+VL+MSLCFIGFVTALHVFGKLYR ++A
Sbjct: 52 NMLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHVFGKLYRSRTA 97
>gi|242089283|ref|XP_002440474.1| hypothetical protein SORBIDRAFT_09g001550 [Sorghum bicolor]
gi|241945759|gb|EES18904.1| hypothetical protein SORBIDRAFT_09g001550 [Sorghum bicolor]
Length = 107
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 45/46 (97%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
NMLRFYTD+APGL++SPT+VL+MSLCFIGFVTALH+FGKLYR ++A
Sbjct: 58 NMLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHIFGKLYRSRTA 103
>gi|226502354|ref|NP_001147265.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195609254|gb|ACG26457.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195627810|gb|ACG35735.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|413950193|gb|AFW82842.1| protein transport protein Sec61 beta subunit [Zea mays]
Length = 107
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 45/46 (97%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
NMLRFYTD+APGL++SPT+VL+MSLCFIGFVTALH+FGKLYR ++A
Sbjct: 58 NMLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHIFGKLYRSRTA 103
>gi|224106756|ref|XP_002314275.1| predicted protein [Populus trichocarpa]
gi|222850683|gb|EEE88230.1| predicted protein [Populus trichocarpa]
Length = 83
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/42 (92%), Positives = 42/42 (100%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
NMLRFYTDDAPGLKISPT+VL++SLCFIGFVTALHVFGKLYR
Sbjct: 41 NMLRFYTDDAPGLKISPTIVLVISLCFIGFVTALHVFGKLYR 82
>gi|226507928|ref|NP_001152478.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195656683|gb|ACG47809.1| protein transport protein Sec61 beta subunit [Zea mays]
Length = 84
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/46 (80%), Positives = 44/46 (95%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
NMLRFYTD+APGL++SPT+VL+MSLCFIGFVTALH+FGKLYR + A
Sbjct: 35 NMLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHIFGKLYRSRKA 80
>gi|168062308|ref|XP_001783123.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665373|gb|EDQ52060.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 44/47 (93%)
Query: 54 STNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
++NMLRFYTDDAPGLKI+PTVVL+MSLCFIGFVT LHV GKLY ++S
Sbjct: 36 NSNMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTCLHVIGKLYNYRS 82
>gi|222615360|gb|EEE51492.1| hypothetical protein OsJ_32647 [Oryza sativa Japonica Group]
Length = 50
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 44/45 (97%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
MLRFYTD+APGL++SPT+VL+MSLCFIGFVTALHVFGKLYR ++A
Sbjct: 1 MLRFYTDEAPGLRLSPTMVLVMSLCFIGFVTALHVFGKLYRSRTA 45
>gi|356496312|ref|XP_003517012.1| PREDICTED: protein transport protein Sec61 subunit beta [Glycine
max]
gi|356506563|ref|XP_003522049.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Glycine max]
gi|255630067|gb|ACU15387.1| unknown [Glycine max]
Length = 82
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 56/79 (70%), Gaps = 7/79 (8%)
Query: 18 GVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLL 77
G PRGSAAATA MRRRR TG + +G A+ ML+FYTDDAPGLKISP VVL+
Sbjct: 5 GTAPPRGSAAATASMRRRRTTGGAASGG-------AAGTMLQFYTDDAPGLKISPNVVLV 57
Query: 78 MSLCFIGFVTALHVFGKLY 96
MS+ FI FV LHV GKLY
Sbjct: 58 MSIGFIAFVAILHVMGKLY 76
>gi|168058014|ref|XP_001781006.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667563|gb|EDQ54190.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/45 (82%), Positives = 42/45 (93%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
NMLRFYTDDAPGLKI+PTVVL+MSLCFIGFVT LHV GKLY +++
Sbjct: 36 NMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTCLHVVGKLYNYRT 80
>gi|357518959|ref|XP_003629768.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
gi|355523790|gb|AET04244.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
Length = 81
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 55/84 (65%), Gaps = 7/84 (8%)
Query: 18 GVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLL 77
G RGSAAATA MRRR+ G +G A+ ML+FYTDDAPGLKISP VVL+
Sbjct: 5 GAAPQRGSAAATASMRRRKTPGGGASGG-------AAGTMLQFYTDDAPGLKISPNVVLV 57
Query: 78 MSLCFIGFVTALHVFGKLYRHKSA 101
MS+ FI FV LHV GKLY K A
Sbjct: 58 MSIGFIAFVAILHVIGKLYLRKEA 81
>gi|167999251|ref|XP_001752331.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696726|gb|EDQ83064.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 76
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 41/43 (95%)
Query: 54 STNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
++NMLRFYTDDAPGLKI+PTVVL+MSLCFIGFVT LHV GKLY
Sbjct: 34 NSNMLRFYTDDAPGLKITPTVVLVMSLCFIGFVTCLHVVGKLY 76
>gi|15225401|ref|NP_182033.1| protein transport protein sec61 subunit beta [Arabidopsis
thaliana]
gi|79324909|ref|NP_001031539.1| protein transport protein sec61 subunit beta [Arabidopsis
thaliana]
gi|79324911|ref|NP_001031540.1| protein transport protein sec61 subunit beta [Arabidopsis
thaliana]
gi|145331405|ref|NP_001078061.1| protein transport protein sec61 subunit beta [Arabidopsis
thaliana]
gi|585960|sp|P38389.1|SC61B_ARATH RecName: Full=Protein transport protein Sec61 subunit beta
gi|433665|emb|CAA81412.1| Sec61 beta-subunit homolog [Arabidopsis thaliana]
gi|24030258|gb|AAN41304.1| putative transport protein SEC61 beta-subunit [Arabidopsis
thaliana]
gi|222423716|dbj|BAH19824.1| AT2G45070 [Arabidopsis thaliana]
gi|222423975|dbj|BAH19949.1| AT2G45070 [Arabidopsis thaliana]
gi|330255408|gb|AEC10502.1| protein transport protein sec61 subunit beta [Arabidopsis
thaliana]
gi|330255409|gb|AEC10503.1| protein transport protein sec61 subunit beta [Arabidopsis
thaliana]
gi|330255410|gb|AEC10504.1| protein transport protein sec61 subunit beta [Arabidopsis
thaliana]
gi|330255411|gb|AEC10505.1| protein transport protein sec61 subunit beta [Arabidopsis
thaliana]
Length = 82
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MRRR+ T +G G S GA+ +ML+FYTDDAPGLKISP VVL+MS+ F
Sbjct: 9 RGSAAATASMRRRKPTSGAGGGGAS---GGAAGSMLQFYTDDAPGLKISPNVVLIMSIGF 65
Query: 83 IGFVTALHVFGKLYRHK 99
I FV LHV GKLY K
Sbjct: 66 IAFVAVLHVMGKLYFVK 82
>gi|388512517|gb|AFK44320.1| unknown [Lotus japonicus]
Length = 82
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 53/74 (71%), Gaps = 7/74 (9%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MRRR+ G + G A+ NML+FYTDDAPGLKISP VVL+MS+ F
Sbjct: 10 RGSAAATASMRRRKPAGGAAAGG-------AAGNMLQFYTDDAPGLKISPNVVLVMSIGF 62
Query: 83 IGFVTALHVFGKLY 96
I FV LHV GKLY
Sbjct: 63 IAFVAILHVMGKLY 76
>gi|297820916|ref|XP_002878341.1| SEC61 beta [Arabidopsis lyrata subsp. lyrata]
gi|297324179|gb|EFH54600.1| SEC61 beta [Arabidopsis lyrata subsp. lyrata]
Length = 79
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 54/78 (69%), Gaps = 8/78 (10%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MRRR+ G G GA+ ML+FYTDDAPGLKISP VVL+MS+ F
Sbjct: 9 RGSAAATASMRRRK--------PGGSAGGGAAGTMLQFYTDDAPGLKISPNVVLIMSIGF 60
Query: 83 IGFVTALHVFGKLYRHKS 100
I FV LHV GKLY KS
Sbjct: 61 IAFVAVLHVMGKLYFVKS 78
>gi|15232357|ref|NP_191613.1| Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis
thaliana]
gi|42572743|ref|NP_974467.1| Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis
thaliana]
gi|7288002|emb|CAB81840.1| transport protein subunit-like [Arabidopsis thaliana]
gi|332646555|gb|AEE80076.1| Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis
thaliana]
gi|332646556|gb|AEE80077.1| Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis
thaliana]
Length = 81
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/78 (61%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MRRR+ G S + G + ML+FYTDDAPGLKISP VVL+MS+ F
Sbjct: 9 RGSAAATASMRRRKPAGGSSSAGGG------AGTMLQFYTDDAPGLKISPNVVLIMSIGF 62
Query: 83 IGFVTALHVFGKLYRHKS 100
I FV LHV GKLY KS
Sbjct: 63 IAFVAVLHVMGKLYFVKS 80
>gi|412993675|emb|CCO14186.1| predicted protein [Bathycoccus prasinos]
Length = 77
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 56/69 (81%), Gaps = 2/69 (2%)
Query: 31 GMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
G+R+R TGS G+ + GGA A++++L+FYTDD+PGLKI+P VVL+MS+CFIGFVT LH
Sbjct: 9 GLRKRPGTGS-GSNIAAKGGA-ANSSILKFYTDDSPGLKITPVVVLVMSVCFIGFVTILH 66
Query: 91 VFGKLYRHK 99
K+Y++K
Sbjct: 67 AMSKIYQYK 75
>gi|26450635|dbj|BAC42429.1| putative transport protein subunit [Arabidopsis thaliana]
Length = 81
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MR+R+ G S + G + ML+FYTDDAPGLKISP VVL+MS+ F
Sbjct: 9 RGSAAATASMRKRKPAGGSSSAGGG------AGTMLQFYTDDAPGLKISPNVVLIMSIGF 62
Query: 83 IGFVTALHVFGKLYRHKS 100
I FV LHV GKLY KS
Sbjct: 63 IAFVAVLHVMGKLYFVKS 80
>gi|357470001|ref|XP_003605285.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
gi|355506340|gb|AES87482.1| Protein transport protein Sec61 beta subunit [Medicago truncatula]
gi|388516919|gb|AFK46521.1| unknown [Medicago truncatula]
gi|388518729|gb|AFK47426.1| unknown [Medicago truncatula]
Length = 80
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MRRR+ G +G A+ ML+FYTDDAPGLKISP VVL+MS+ F
Sbjct: 10 RGSAAATASMRRRKTAGGGASGG-------AAGTMLQFYTDDAPGLKISPNVVLVMSIGF 62
Query: 83 IGFVTALHVFGKLYRHKS 100
I FV LHV GKLY ++
Sbjct: 63 IAFVAVLHVVGKLYLREA 80
>gi|297828225|ref|XP_002881995.1| SEC61 beta [Arabidopsis lyrata subsp. lyrata]
gi|297327834|gb|EFH58254.1| SEC61 beta [Arabidopsis lyrata subsp. lyrata]
Length = 82
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MRRR+ + G GA+ +ML+FYTDDAPGLKISP VVL+MS+ F
Sbjct: 9 RGSAAATASMRRRK---PASGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLIMSIGF 65
Query: 83 IGFVTALHVFGKLYRHK 99
I FV LHV GKLY K
Sbjct: 66 IAFVAVLHVMGKLYFVK 82
>gi|388498140|gb|AFK37136.1| unknown [Lotus japonicus]
Length = 82
Score = 81.6 bits (200), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 52/74 (70%), Gaps = 7/74 (9%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSAAATA MRRR+ G + G A+ NML+FYTDDAPGLKISP VVL+MS F
Sbjct: 10 RGSAAATASMRRRKPAGGAAAGG-------AAGNMLQFYTDDAPGLKISPNVVLVMSTGF 62
Query: 83 IGFVTALHVFGKLY 96
I FV LHV GKLY
Sbjct: 63 IAFVAILHVMGKLY 76
>gi|116792962|gb|ABK26570.1| unknown [Picea sitchensis]
Length = 122
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/45 (80%), Positives = 41/45 (91%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
NMLRFYTDDAPGLKI+PTVVL+MSL FIGFVT LHV GKLY +++
Sbjct: 76 NMLRFYTDDAPGLKITPTVVLVMSLGFIGFVTTLHVIGKLYHYRA 120
>gi|147785387|emb|CAN70909.1| hypothetical protein VITISV_040118 [Vitis vinifera]
Length = 422
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHK 99
N+LRFYTDD PGLKI+P VVL+ SLCFIGFV ALHVFG++YRH+
Sbjct: 309 NLLRFYTDDPPGLKITPMVVLVTSLCFIGFVIALHVFGEIYRHR 352
>gi|302144212|emb|CBI23339.3| unnamed protein product [Vitis vinifera]
Length = 367
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHK 99
N+LRFYTDDAPGLKI+P VVL+ SL FIGFV ALHVFG++YRH+
Sbjct: 52 NLLRFYTDDAPGLKITPMVVLVTSLWFIGFVIALHVFGEIYRHR 95
>gi|255541162|ref|XP_002511645.1| Protein transport protein Sec61 subunit beta, putative [Ricinus
communis]
gi|223548825|gb|EEF50314.1| Protein transport protein Sec61 subunit beta, putative [Ricinus
communis]
Length = 82
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 53/79 (67%), Gaps = 7/79 (8%)
Query: 18 GVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLL 77
G PRGSAAATA +RRRR T +G A+ ML+FYTDD+ GLKISP VVL+
Sbjct: 5 GTAPPRGSAAATASLRRRRTTSGGASGG-------AAGTMLQFYTDDSSGLKISPNVVLI 57
Query: 78 MSLCFIGFVTALHVFGKLY 96
MS+ FI FV LHV GKLY
Sbjct: 58 MSIGFIAFVAILHVVGKLY 76
>gi|297734549|emb|CBI16600.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 45 SGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
SG+ G GAS NML+FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 67 SGATAG-GASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLY 117
>gi|225453502|ref|XP_002277890.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Vitis vinifera]
Length = 82
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
Query: 45 SGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
SG+ G GAS NML+FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 26 SGATAG-GASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLY 76
>gi|116778810|gb|ABK21007.1| unknown [Picea sitchensis]
Length = 85
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
Query: 22 PRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLC 81
PRGSAAA RRR +G G+GS + NMLRFYTDDAPGLKI+PTVVL+MSL
Sbjct: 9 PRGSAAAAGLRRRRMSGAGAGAGAGSS----SGGNMLRFYTDDAPGLKITPTVVLVMSLG 64
Query: 82 FIGFVTALHVFGKLYRHKS 100
FIGFVTALHV GKLY +++
Sbjct: 65 FIGFVTALHVIGKLYHYRA 83
>gi|297734544|emb|CBI16595.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Query: 49 GGAG-ASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
G AG AS NML+FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 58 GTAGVASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLY 106
>gi|116789756|gb|ABK25370.1| unknown [Picea sitchensis]
gi|116793154|gb|ABK26631.1| unknown [Picea sitchensis]
gi|148907271|gb|ABR16774.1| unknown [Picea sitchensis]
Length = 83
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 6/79 (7%)
Query: 22 PRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLC 81
PRGSAAA + +G+G+ G+ + +NMLRFYTDDAPGLKI+PTVVL+MSL
Sbjct: 9 PRGSAAAAG------LRRRRMSGAGAGAGSSSGSNMLRFYTDDAPGLKITPTVVLVMSLG 62
Query: 82 FIGFVTALHVFGKLYRHKS 100
FIGFVT LHV GKLY +++
Sbjct: 63 FIGFVTTLHVIGKLYHYRA 81
>gi|301108045|ref|XP_002903104.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097476|gb|EEY55528.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 158
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 24 GSAAATAGMRRRRVTGSSGNGSGS-VGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
G AA +G+R RR ++ +G + G G+S +LRFYTDD+PGLKI PT VL+ L F
Sbjct: 84 GEGAAASGLRNRRPVAAARSGQNTGRGMGGSSAGILRFYTDDSPGLKIGPTTVLVSCLMF 143
Query: 83 IGFVTALHVFGKL 95
+GFV LHV+GK
Sbjct: 144 VGFVVLLHVWGKF 156
>gi|225453513|ref|XP_002278236.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Vitis vinifera]
Length = 82
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%)
Query: 53 ASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
AS NML+FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 33 ASGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLY 76
>gi|255071101|ref|XP_002507632.1| type II secretory pathway family [Micromonas sp. RCC299]
gi|226522907|gb|ACO68890.1| type II secretory pathway family, partial [Micromonas sp. RCC299]
Length = 70
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Query: 31 GMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
G+RRR + SGS GGA S +MLR+Y DD+PGLKI+P VVLLMS+CFI FVT LH
Sbjct: 3 GLRRR---NAGSRVSGSSGGAVNSMSMLRYYADDSPGLKITPVVVLLMSVCFIAFVTVLH 59
Query: 91 VFGKLYRHKSA 101
K+Y+ +S+
Sbjct: 60 AVAKIYQFRSS 70
>gi|303273264|ref|XP_003055993.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
gi|226462077|gb|EEH59369.1| type II secretory pathway family protein [Micromonas pusilla
CCMP1545]
Length = 114
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
RRR +G SG + G G S MLRFYT++A GLKI+P +VL++S+CFI FVT LH
Sbjct: 49 RRRTSGVSGPFRSANNGNGMS--MLRFYTEEAQGLKITPVLVLVISVCFIAFVTMLHAIS 106
Query: 94 KLYRHKSA 101
K+Y+++++
Sbjct: 107 KIYQYRNS 114
>gi|159485960|ref|XP_001701012.1| SEC61-beta subunit of ER-translocon [Chlamydomonas reinhardtii]
gi|158281511|gb|EDP07266.1| SEC61-beta subunit of ER-translocon, partial [Chlamydomonas
reinhardtii]
Length = 89
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 6 SQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDA 65
SQS S+ +R G + A +RRR V GS G+G+ A + FYTDD
Sbjct: 4 SQSQASTLVARGGRSSSNAPTGAAGALRRRPVRGSGGSGT-----TKAQQAAMNFYTDDT 58
Query: 66 PGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
PG K+SP VV+ MSL FI FVT LHV GK
Sbjct: 59 PGWKMSPVVVITMSLSFIAFVTILHVVGKF 88
>gi|145341641|ref|XP_001415914.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576137|gb|ABO94206.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 76
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+RRR G+SG G+ G S ++LRFYTD++PGLKI+P VVL MS+CFIGFVT LH
Sbjct: 5 VRRRANAGNSGEGNVRRPPQG-SGSLLRFYTDESPGLKITPVVVLGMSVCFIGFVTMLHA 63
Query: 92 FGKLYRHKSAN 102
K+ + S+
Sbjct: 64 IAKISAYTSSK 74
>gi|432908543|ref|XP_004077913.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Oryzias latipes]
Length = 97
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VAPR AA + +R+R+ T SS G G+ + M RFYT+D+PGLK+ P VL+MS
Sbjct: 22 VAPR---AAGSTVRQRKATSSSTRSGGRTTGSAGTGGMWRFYTEDSPGLKVGPVPVLVMS 78
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 79 LLFIASVFMLHIWGKYTR 96
>gi|388521563|gb|AFK48843.1| unknown [Lotus japonicus]
Length = 82
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
ML+FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 37 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLY 76
>gi|118481181|gb|ABK92542.1| unknown [Populus trichocarpa]
Length = 84
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
ML+FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 39 MLQFYTDDAPGLKISPNVVLVMSIDFIAFVAILHVVGKLY 78
>gi|384249922|gb|EIE23402.1| hypothetical protein COCSUDRAFT_65897 [Coccomyxa subellipsoidea
C-169]
Length = 100
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R T S+G+G+G GAG N FYTDD PGLK+SP VV+ +S+ FI FVT LH+ G
Sbjct: 39 RKRTTRSTGSGAGRQSGAGGGLN---FYTDDTPGLKMSPVVVVFISVGFIIFVTVLHIVG 95
Query: 94 KL 95
KL
Sbjct: 96 KL 97
>gi|224067618|ref|XP_002302515.1| predicted protein [Populus trichocarpa]
gi|118481855|gb|ABK92864.1| unknown [Populus trichocarpa]
gi|222844241|gb|EEE81788.1| predicted protein [Populus trichocarpa]
Length = 84
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 34/41 (82%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
ML+FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 38 TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLY 78
>gi|308799385|ref|XP_003074473.1| protein transport protein subunit-like (ISS) [Ostreococcus tauri]
gi|116000644|emb|CAL50324.1| protein transport protein subunit-like (ISS) [Ostreococcus tauri]
Length = 91
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RG A +RRR V G V +MLRFY+D++PGLKI+P VVL MS+CF
Sbjct: 18 RGDARDVGTVRRRVVP------QGEVRRPPPQGSMLRFYSDESPGLKITPVVVLGMSVCF 71
Query: 83 IGFVTALHVFGKL 95
IGFVT LH K+
Sbjct: 72 IGFVTMLHAIAKI 84
>gi|224136268|ref|XP_002326819.1| predicted protein [Populus trichocarpa]
gi|118486407|gb|ABK95043.1| unknown [Populus trichocarpa]
gi|222835134|gb|EEE73569.1| predicted protein [Populus trichocarpa]
Length = 82
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
ML+FYTDDAPGLKISP VVL+MS+ FI FV LHV GKLY
Sbjct: 37 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVVGKLY 76
>gi|348527022|ref|XP_003451018.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Oreochromis niloticus]
Length = 97
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VAPR AA + +R+R+ T S G G+ + M RFYT+D+PGLK+ P VL+MS
Sbjct: 22 VAPR---AAGSTVRQRKATSSGTRSGGRTTGSAGTGGMWRFYTEDSPGLKVGPVPVLVMS 78
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 79 LLFIASVFMLHIWGKYTR 96
>gi|348673629|gb|EGZ13448.1| hypothetical protein PHYSODRAFT_335225 [Phytophthora sojae]
Length = 110
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGAST-NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
+R RR ++ +G + G G ST +LRFYTDD+PGLKI PT VL+ L F+GFV LH
Sbjct: 44 LRNRRPVAAARSGQNTGRGMGGSTAGILRFYTDDSPGLKIGPTTVLVSCLMFVGFVVLLH 103
Query: 91 VFGKL 95
V+GK
Sbjct: 104 VWGKF 108
>gi|397638881|gb|EJK73266.1| hypothetical protein THAOC_05119 [Thalassiosira oceanica]
Length = 159
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 40 SSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
++G SG G GAS+N+L+FYTDD+PGL++SPT VL+ SL F+G V LH+ GK
Sbjct: 58 TAGRASGG-GNRGASSNILQFYTDDSPGLQVSPTQVLVASLSFVGVVVVLHILGKF 112
>gi|353236361|emb|CCA68357.1| probable translocon subunit [Piriformospora indica DSM 11827]
Length = 99
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 9/93 (9%)
Query: 8 SSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSS---GNGSGSVGGAGASTNMLRFYTDD 64
S T TS V P G+ RRR TGS+ N + + G G+S ML+ YTDD
Sbjct: 9 SPTGKTTSSSAVARPPGAQV------RRRATGSTVQKPNSARAAGAGGSSNTMLKLYTDD 62
Query: 65 APGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
+PGL++ P VVL++SL FIG + LH+ K+ R
Sbjct: 63 SPGLRVDPFVVLILSLSFIGSIFFLHISAKIIR 95
>gi|392562545|gb|EIW55725.1| Pre protein translocase Sec Sec61-beta subunit [Trametes
versicolor FP-101664 SS1]
Length = 96
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 10/97 (10%)
Query: 5 SSQSSTSSATSRP-GVVAPRGSAAATAGMRRRRVTGSS---GNGSGSVGGAGASTNMLRF 60
S S+ S RP GV P G+ RRR TGS N S + G G+S ML+
Sbjct: 2 SDSESSRSNNGRPTGVAKPPGTQI------RRRATGSQVSKPNSSRAAGAGGSSNTMLKL 55
Query: 61 YTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
YTDD+PGL++ P +VL++SL FI + LH+ K+ R
Sbjct: 56 YTDDSPGLRVDPFIVLVLSLSFIASIFFLHISAKIIR 92
>gi|289742355|gb|ADD19925.1| sec61 protein translocation complex beta subunit [Glossina
morsitans morsitans]
gi|289742357|gb|ADD19926.1| sec61 protein translocation complex beta subunit [Glossina
morsitans morsitans]
Length = 98
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 21 APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSL 80
APR +A A +++R+ T SSG G + M RFYTDD+PG+K+ P VL+MSL
Sbjct: 22 APR-TAGAGGNLKQRKTTSSSGAAKSRATGGAGTGGMWRFYTDDSPGIKVGPVPVLVMSL 80
Query: 81 CFIGFVTALHVFGKLYR 97
FI V LH++GK R
Sbjct: 81 LFIASVFMLHIWGKYNR 97
>gi|390596156|gb|EIN05559.1| Pre protein translocase Sec Sec61-beta subunit [Punctularia
strigosozonata HHB-11173 SS5]
Length = 99
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 8 SSTSSATSRPGVVAPRGSAAAT---AGMRRR-RVTGSSGNGSGSVGGAGASTNMLRFYTD 63
S T S +SRP + R + A A +RRR T N + + G G+S ML+ YTD
Sbjct: 2 SDTDSPSSRPTTPSARNTGVAKPPGAAIRRRATATVQKPNSTRAAGAGGSSNTMLKLYTD 61
Query: 64 DAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
D+PGL++ P +VL++SL FI + LH+ K+ R
Sbjct: 62 DSPGLRVDPFIVLVLSLSFIASIFFLHIAAKVIR 95
>gi|323454926|gb|EGB10795.1| hypothetical protein AURANDRAFT_17697, partial [Aureococcus
anophagefferens]
Length = 67
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+++R+ + +G G+ + +LRFY D+APGLKI PT VL+MSL FIGFV LH+
Sbjct: 5 LQQRKRPARTSSGGGARAMQRSQPGILRFYADEAPGLKIGPTTVLVMSLMFIGFVVLLHI 64
Query: 92 FGK 94
+GK
Sbjct: 65 YGK 67
>gi|241862607|ref|XP_002416394.1| Sec61 protein translocation complex beta-subunit, putative
[Ixodes scapularis]
gi|215510608|gb|EEC20061.1| Sec61 protein translocation complex beta-subunit, putative
[Ixodes scapularis]
gi|442754207|gb|JAA69263.1| Putative sec61beta [Ixodes ricinus]
Length = 94
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 17 PGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVL 76
P APR SA++T +++R+ T +S + + AG M +FYTDD+PG+K+ P VL
Sbjct: 17 PKTTAPRSSASST--VKQRKTTTASSGRTRTPNAAGG--GMWKFYTDDSPGIKVGPVPVL 72
Query: 77 LMSLCFIGFVTALHVFGKLYR 97
+MSL FI V LH++GK R
Sbjct: 73 VMSLLFIASVFMLHIWGKYTR 93
>gi|213512795|ref|NP_001135088.1| transport protein Sec61 subunit beta [Salmo salar]
gi|209736576|gb|ACI69157.1| transport protein Sec61 subunit beta [Salmo salar]
gi|209737110|gb|ACI69424.1| transport protein Sec61 subunit beta [Salmo salar]
gi|209738264|gb|ACI70001.1| transport protein Sec61 subunit beta [Salmo salar]
gi|209738660|gb|ACI70199.1| transport protein Sec61 subunit beta [Salmo salar]
gi|223646530|gb|ACN10023.1| transport protein Sec61 subunit beta [Salmo salar]
gi|223646708|gb|ACN10112.1| transport protein Sec61 subunit beta [Salmo salar]
gi|223672377|gb|ACN12370.1| transport protein Sec61 subunit beta [Salmo salar]
gi|223672561|gb|ACN12462.1| transport protein Sec61 subunit beta [Salmo salar]
Length = 98
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSG-SVGGAGASTNMLRFYTDDAPGLKISPTVVLLM 78
VAPR AA + +R+R+ T S +G + AG + M RFYT+D+PGLK+ P VL+M
Sbjct: 22 VAPR---AAGSTVRQRKATSSGTRSAGRTTASAGGTGGMWRFYTEDSPGLKVGPVPVLVM 78
Query: 79 SLCFIGFVTALHVFGKLYR 97
SL FI V LH++GK R
Sbjct: 79 SLLFIASVFMLHIWGKYTR 97
>gi|401400253|ref|XP_003880748.1| agap011504-PA, related [Neospora caninum Liverpool]
gi|325115159|emb|CBZ50715.1| agap011504-PA, related [Neospora caninum Liverpool]
Length = 99
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Query: 34 RRRVTGSSGNGSGSV-----GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTA 88
RRRVT S G S S G +S +LRFYTDD PGLKI P VL+M+LCF+ V
Sbjct: 26 RRRVT-SGGGASNSAAQRPRGMPASSQGILRFYTDDTPGLKIGPQTVLIMTLCFMACVVL 84
Query: 89 LHVFGKLYR 97
LH+ GK+++
Sbjct: 85 LHIAGKVHQ 93
>gi|157138304|ref|XP_001657235.1| protein translocation complex beta subunit, putative [Aedes
aegypti]
gi|56417570|gb|AAV90726.1| transport protein Sec61 beta subunit-like [Aedes albopictus]
gi|94468870|gb|ABF18284.1| transport protein SEC61 beta subunit [Aedes aegypti]
gi|108869512|gb|EAT33737.1| AAEL013989-PA [Aedes aegypti]
Length = 99
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 21 APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSL 80
APR SA ++ +++R+ T ++ G G S M RFYTDD+PG+K+ P VL+MSL
Sbjct: 23 APRASAGGSSNLKQRKTTTTTTAARNRTTGTG-SGGMWRFYTDDSPGIKVGPVPVLVMSL 81
Query: 81 CFIGFVTALHVFGKLYR 97
FI V LH++GK R
Sbjct: 82 LFIASVFMLHIWGKYTR 98
>gi|302907442|ref|XP_003049647.1| hypothetical protein NECHADRAFT_65220 [Nectria haematococca mpVI
77-13-4]
gi|256730583|gb|EEU43934.1| hypothetical protein NECHADRAFT_65220 [Nectria haematococca mpVI
77-13-4]
Length = 112
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + + + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 44 QKEKIANARPSSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLILSLVFIFSVVALHII 103
Query: 93 GKLYRHKSA 101
K+ R S+
Sbjct: 104 AKITRKFSS 112
>gi|189207274|ref|XP_001939971.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976064|gb|EDU42690.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 520
Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 3 RGSSQSSTS--------SATSRPGVVAPRGSAAATAGMRRR-------RVTGSSGNGSGS 47
+GSSQ +TS + T+RP P G A MRR+ + + + +
Sbjct: 409 QGSSQRATSPSNAASSGTTTARPASPKPPGGPATV--MRRKAAADRAEKTANLRPSSTRA 466
Query: 48 VGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
G G+S+ MLR YTD++PGLK+ P VV+ +S+ FI V ALHV K+ R SA
Sbjct: 467 AGAGGSSSTMLRLYTDESPGLKVDPVVVMTLSVVFIFSVVALHVIAKVMRRFSA 520
>gi|346471227|gb|AEO35458.1| hypothetical protein [Amblyomma maculatum]
Length = 95
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 19 VVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLM 78
V APR S +T +++R+ T +S + + G AG M +FYTDD+PG+K+ P VL+M
Sbjct: 20 VAAPRSSGGST--VKQRKTTSASSGRTRTPGAAGG--GMWKFYTDDSPGIKVGPVPVLVM 75
Query: 79 SLCFIGFVTALHVFGKLYR 97
SL FI V LH++GK R
Sbjct: 76 SLLFIASVFMLHIWGKYTR 94
>gi|393237922|gb|EJD45461.1| Pre protein translocase Sec Sec61-beta subunit [Auricularia
delicata TFB-10046 SS5]
Length = 108
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 17 PGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGA---STNMLRFYTDDAPGLKISPT 73
PG P G+A RRR T + N S AGA S ML+ YTDD+PGL++ P
Sbjct: 26 PGAARPVGTAQI-----RRRATNQAANKPNSTRAAGAGGSSNTMLKLYTDDSPGLRVDPF 80
Query: 74 VVLLMSLCFIGFVTALHVFGKLYR 97
+VL++SL FI + LH+ K+ R
Sbjct: 81 IVLVLSLSFIASIFFLHISAKIIR 104
>gi|451850567|gb|EMD63869.1| hypothetical protein COCSADRAFT_172112 [Cochliobolus sativus
ND90Pr]
Length = 525
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 9 STSSATSRPGVVAPRGSAAATAGMRRR-------RVTGSSGNGSGSVGGAGASTNMLRFY 61
S+ S T+RP P G A MRR+ + + + + G G+S+ MLR Y
Sbjct: 428 SSGSTTARPASPKPPGGPATV--MRRKAAADRAEKTANLRPSSTRAAGAGGSSSTMLRLY 485
Query: 62 TDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
TD++PGLK+ P VV+ +S+ FI V ALHV K+ R SA
Sbjct: 486 TDESPGLKVDPVVVMTLSVVFIFSVVALHVIAKVMRRFSA 525
>gi|452000609|gb|EMD93070.1| hypothetical protein COCHEDRAFT_1212852 [Cochliobolus
heterostrophus C5]
Length = 505
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 9/100 (9%)
Query: 9 STSSATSRPGVVAPRGSAAATAGMRRR-------RVTGSSGNGSGSVGGAGASTNMLRFY 61
S+ S T+RP P G A MRR+ + + + + G G+S+ MLR Y
Sbjct: 408 SSGSTTARPASPKPPGGPATV--MRRKAAADRAEKTANLRPSSTRAAGAGGSSSTMLRLY 465
Query: 62 TDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
TD++PGLK+ P VV+ +S+ FI V ALHV K+ R SA
Sbjct: 466 TDESPGLKVDPVVVMTLSVVFIFSVVALHVIAKVMRRFSA 505
>gi|427786055|gb|JAA58479.1| Putative sec61beta [Rhipicephalus pulchellus]
Length = 95
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 19 VVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLM 78
V APR S +T +++R+ T +S + + G AG M +FYTDD+PG+K+ P VL+M
Sbjct: 20 VAAPRSSGGST--VKQRKTTSASSGRTRTPGAAGG--GMWKFYTDDSPGIKVGPVPVLVM 75
Query: 79 SLCFIGFVTALHVFGKLYR 97
SL FI V LH++GK R
Sbjct: 76 SLLFIASVFMLHIWGKYTR 94
>gi|198437803|ref|XP_002129488.1| PREDICTED: similar to Sec61 protein translocation complex beta
subunit [Ciona intestinalis]
Length = 97
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 30 AGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTAL 89
A +R+R+ T ++ S GG+GA + M RFY++D+PGLK+ P VL+MSL FI V L
Sbjct: 28 ATVRQRKATPTTRAKSTPGGGSGAGSTMWRFYSEDSPGLKVGPVPVLVMSLLFIASVFML 87
Query: 90 HVFGK 94
H++GK
Sbjct: 88 HIWGK 92
>gi|169856974|ref|XP_001835140.1| hypothetical protein CC1G_07282 [Coprinopsis cinerea
okayama7#130]
gi|116503729|gb|EAU86624.1| hypothetical protein CC1G_07282 [Coprinopsis cinerea
okayama7#130]
Length = 97
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 26 AAATAGMRRRRVTGSSG----NGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLC 81
A A RRR G+S N + + G G+S ML+ YTDD+PGL+I P +VL++SL
Sbjct: 18 AKPPAAQIRRRAAGASQAARPNSTRAAGAGGSSNTMLKLYTDDSPGLRIDPFIVLVLSLS 77
Query: 82 FIGFVTALHVFGKLYR 97
FIG + LH+ K+ R
Sbjct: 78 FIGSIFFLHISAKVIR 93
>gi|194757028|ref|XP_001960767.1| GF11335 [Drosophila ananassae]
gi|190622065|gb|EDV37589.1| GF11335 [Drosophila ananassae]
Length = 100
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 21 APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTN-MLRFYTDDAPGLKISPTVVLLMS 79
APR S A ++R T SS + S GA T M RFYTDD+PG+K+ P VL+MS
Sbjct: 22 APRSSGAGGGSTLKQRKTTSSTTAARSRAPGGAGTGGMWRFYTDDSPGIKVGPVPVLVMS 81
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 82 LLFIASVFMLHIWGKYNR 99
>gi|396479636|ref|XP_003840802.1| hypothetical protein LEMA_P104540.1 [Leptosphaeria maculans JN3]
gi|312217375|emb|CBX97323.1| hypothetical protein LEMA_P104540.1 [Leptosphaeria maculans JN3]
Length = 226
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 8 SSTSSATSRPGVVAPRGSAAAT-----AGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYT 62
+S+ S T+RP P G A A R + + + + G G+S+ MLR YT
Sbjct: 128 ASSGSTTARPASPKPPGGPATVMRRKAAADRAEKTANLRPSSTRAAGAGGSSSTMLRLYT 187
Query: 63 DDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
D++PGLK+ P VV+ +S+ FI V ALHV K+ R SA
Sbjct: 188 DESPGLKVDPVVVMTLSVVFIFSVVALHVIAKVMRRFSA 226
>gi|409077403|gb|EKM77769.1| hypothetical protein AGABI1DRAFT_115034 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426193274|gb|EKV43208.1| hypothetical protein AGABI2DRAFT_153873 [Agaricus bisporus var.
bisporus H97]
Length = 95
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 34 RRRVTGSS---GNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
RRR GS N S + G G+S ML+ YTDD+PGL++ P +VL++SL FIG + LH
Sbjct: 25 RRRAAGSQVSKPNSSRAAGAGGSSNTMLKLYTDDSPGLRVDPFIVLVLSLSFIGSIFFLH 84
Query: 91 VFGKLYR 97
+ K+ R
Sbjct: 85 ISAKIIR 91
>gi|322795695|gb|EFZ18374.1| hypothetical protein SINV_05925 [Solenopsis invicta]
Length = 159
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
+APR + T R+ VT S+ N + G M RFYTDD+PG+K+ P VL+MS
Sbjct: 85 IAPRTGGSGTVRQRKTTVTSSARNRNTGTSSGG----MWRFYTDDSPGIKVGPVPVLVMS 140
Query: 80 LCFIGFVTALHVFGKLYRH 98
L FI V LH++GK R+
Sbjct: 141 LLFIASVFMLHIWGKYTRN 159
>gi|409043751|gb|EKM53233.1| hypothetical protein PHACADRAFT_163521 [Phanerochaete carnosa
HHB-10118-sp]
Length = 98
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 13/99 (13%)
Query: 6 SQSSTSSATSRP---GVVAPRGSAAATAGMRRRRVTGSSG----NGSGSVGGAGASTNML 58
S S +S +RP GV P G+ RRR GS+ N + + G G+S ML
Sbjct: 2 SDSESSRPVARPAASGVAKPPGAQV------RRRAAGSTQVSKPNSTRAAGAGGSSNTML 55
Query: 59 RFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
+ YTDD+PG+++ P +VL++SL FI + LH+ K+ R
Sbjct: 56 KLYTDDSPGIRVDPFIVLVLSLSFIASIFFLHISAKIIR 94
>gi|312378453|gb|EFR25023.1| hypothetical protein AND_27225 [Anopheles darlingi]
Length = 99
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 2 ARGSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFY 61
A +S S S + S+P APR +A + +++R+ T ++ G G S M RFY
Sbjct: 5 ASATSVGSGSRSPSKP-TSAPRAAAGGASNLKQRKTTTTTTAARNRTTGTG-SGGMWRFY 62
Query: 62 TDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
TDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 63 TDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTR 98
>gi|332027117|gb|EGI67213.1| Protein transport protein Sec61 subunit beta [Acromyrmex
echinatior]
Length = 94
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
+APR + T R+ VT S+ N + G M RFYTDD+PG+K+ P VL+MS
Sbjct: 20 IAPRTGGSGTVRQRKTTVTSSARNRNTGTSSGG----MWRFYTDDSPGIKVGPVPVLVMS 75
Query: 80 LCFIGFVTALHVFGKLYRH 98
L FI V LH++GK R+
Sbjct: 76 LLFIASVFMLHIWGKYTRN 94
>gi|195429427|ref|XP_002062764.1| GK19628 [Drosophila willistoni]
gi|194158849|gb|EDW73750.1| GK19628 [Drosophila willistoni]
Length = 100
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 21 APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTN-MLRFYTDDAPGLKISPTVVLLMS 79
APR + A ++R T SS + S GA T M RFYTDD+PG+K+ P VL+MS
Sbjct: 22 APRSAGAGGGSTLKQRKTTSSNTAARSRAPGGAGTGGMWRFYTDDSPGIKVGPVPVLVMS 81
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 82 LLFIASVFMLHIWGKYNR 99
>gi|294889463|ref|XP_002772825.1| Protein transport protein Sec61 subunit beta, putative [Perkinsus
marinus ATCC 50983]
gi|294948594|ref|XP_002785798.1| Protein transport protein Sec61 subunit beta, putative [Perkinsus
marinus ATCC 50983]
gi|239877375|gb|EER04641.1| Protein transport protein Sec61 subunit beta, putative [Perkinsus
marinus ATCC 50983]
gi|239899906|gb|EER17594.1| Protein transport protein Sec61 subunit beta, putative [Perkinsus
marinus ATCC 50983]
Length = 108
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 1 MARGSSQSSTSSATSRPGVVAPRGSA--AATAGMRRRRVTGSSGNGSGSVGGAGASTNML 58
M +GS + +S P AP + A T + RR V GSS + + G A ++L
Sbjct: 1 MTKGSETNMNTS----PTTAAPAQTVGGARTNHLHRRNV-GSSQKAAPASGRRAAGNSIL 55
Query: 59 RFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
+FYTDDAPG+K+ PT VL++SL ++G V LH+ K
Sbjct: 56 KFYTDDAPGIKVGPTTVLVLSLAYMGCVVCLHILAKF 92
>gi|330918186|ref|XP_003298125.1| hypothetical protein PTT_08731 [Pyrenophora teres f. teres 0-1]
gi|311328865|gb|EFQ93780.1| hypothetical protein PTT_08731 [Pyrenophora teres f. teres 0-1]
Length = 524
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 5 SSQSSTSSATSRPGVVAPRGSAAATAGMRRR-------RVTGSSGNGSGSVGGAGASTNM 57
S+ +S+ + T+RP P G A MRR+ + + + + G G+S+ M
Sbjct: 423 SNAASSGTTTARPASPKPPGGPATV--MRRKAAADRAEKTANLRPSSTRAAGAGGSSSTM 480
Query: 58 LRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
LR YTD++PGLK+ P VV+ +S+ FI V ALHV K+ R SA
Sbjct: 481 LRLYTDESPGLKVDPVVVMTLSVVFIFSVVALHVIAKVMRRFSA 524
>gi|158297580|ref|XP_317795.4| AGAP011504-PA [Anopheles gambiae str. PEST]
gi|157014644|gb|EAA12929.5| AGAP011504-PA [Anopheles gambiae str. PEST]
Length = 99
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 4 GSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTD 63
GS S S TS APR +A ++ +++R+ T ++ G G S M RFYTD
Sbjct: 11 GSGSRSPSKPTS-----APRAAAGGSSTLKQRKTTTTATAARNRNTGTG-SGGMWRFYTD 64
Query: 64 DAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
D+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 65 DSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTR 98
>gi|392586210|gb|EIW75547.1| Pre protein translocase Sec Sec61-beta subunit [Coniophora
puteana RWD-64-598 SS2]
Length = 97
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 34 RRRVTGSSGNGSGSVGGAGAST-NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
RRR TG S GAG S+ ML+ YTDD+PGL++ P VVL++SL FI + LH+
Sbjct: 29 RRRATGQQKPNSTRAAGAGGSSGTMLKLYTDDSPGLRVDPFVVLILSLSFIASIFFLHIS 88
Query: 93 GKLYR 97
K+ R
Sbjct: 89 AKIIR 93
>gi|170096654|ref|XP_001879547.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645915|gb|EDR10162.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 97
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 34 RRRVTGSS---GNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
RRR GS N S + G G+S ML+ YTDD+PGL++ P +VL++SL FIG + LH
Sbjct: 27 RRRAAGSQVSRPNSSRAAGAGGSSNTMLKLYTDDSPGLRVDPFIVLVLSLSFIGSIFFLH 86
Query: 91 VFGKLYR 97
+ K+ R
Sbjct: 87 ISAKVIR 93
>gi|195150464|ref|XP_002016174.1| GL11450 [Drosophila persimilis]
gi|198457263|ref|XP_001360608.2| GA10096 [Drosophila pseudoobscura pseudoobscura]
gi|194110021|gb|EDW32064.1| GL11450 [Drosophila persimilis]
gi|198135920|gb|EAL25183.2| GA10096 [Drosophila pseudoobscura pseudoobscura]
Length = 100
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 21 APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTN-MLRFYTDDAPGLKISPTVVLLMS 79
APR + A ++R T SS + S GA T M RFYTDD+PG+K+ P VL+MS
Sbjct: 22 APRSAGAGGGSTLKQRKTTSSTTAARSRAPGGAGTGGMWRFYTDDSPGIKVGPVPVLVMS 81
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 82 LLFIASVFMLHIWGKYNR 99
>gi|453085497|gb|EMF13540.1| Pre protein translocase Sec Sec61-beta subunit [Mycosphaerella
populorum SO2202]
Length = 111
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 9 STSSATSRPGVVAPRGSAAATAGMRRR-------RVTGSSGNGSGSVGGAGASTNMLRFY 61
ST S T+RP V+P+ +RR+ ++ + + + G G+S+ MLR Y
Sbjct: 14 STGSTTARP--VSPKAPGGPATAIRRKAAADRADKIANARPASTRAAGAGGSSSTMLRLY 71
Query: 62 TDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
TD++PGLK+ P VV+++S+ FI V ALH+ K +
Sbjct: 72 TDESPGLKVDPFVVMVLSIGFIISVVALHIIAKFTKR 108
>gi|149286940|gb|ABR23369.1| Sec61 protein translocation complex beta subunit [Ornithodoros
parkeri]
Length = 97
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 1 MARGSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGS-VGGAGASTNMLR 59
M S ++ SA P APR SA +T +++R+ T + G+ + + A M +
Sbjct: 1 MPASPSATNVGSAGRSPKTAAPRASAGST--VKQRKTTSAGGSRTRTPGAAAAGGGGMWK 58
Query: 60 FYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
FYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 59 FYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTR 96
>gi|312089515|ref|XP_003146276.1| transporter Sec61 subunit beta [Loa loa]
gi|307758561|gb|EFO17795.1| transporter Sec61 subunit beta [Loa loa]
Length = 88
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 17 PGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVL 76
PG A GS T +R+RR S+G+G + GG G S + RFYT+DA GLKI P VL
Sbjct: 8 PGRAARAGSGGTT--VRQRRGGPSAGSGRSARGGVG-SGGLWRFYTEDATGLKIGPVPVL 64
Query: 77 LMSLCFIGFVTALHVFGKLYR 97
+MSL FI V LH++GK R
Sbjct: 65 VMSLVFIASVFILHIWGKYTR 85
>gi|393222299|gb|EJD07783.1| Pre protein translocase Sec Sec61-beta subunit [Fomitiporia
mediterranea MF3/22]
Length = 96
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 26 AAATAGMRRRRVTGSS---GNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
AA RRR GS N + + G G+S MLR YTDD+PGL++ P VVL++S+ F
Sbjct: 18 AAPPGAQVRRRAAGSQVSKPNSTRAAGAGGSSNTMLRLYTDDSPGLRVDPFVVLILSVVF 77
Query: 83 IGFVTALHVFGKLYR 97
IG V LH+ ++ +
Sbjct: 78 IGSVVFLHISARIIK 92
>gi|389749861|gb|EIM91032.1| Pre protein translocase Sec Sec61-beta subunit [Stereum hirsutum
FP-91666 SS1]
Length = 97
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 10 TSSATSRPGVVAPRGSAAATAGMRRRRVTGSSG------NGSGSVGGAGASTNMLRFYTD 63
+ S ++RP +P + A G + RR G+S N + + G G+S ML+ YTD
Sbjct: 2 SDSDSARPA--SPANAVAKPPGAQIRRRAGASSAQVSKPNSTRAAGAGGSSNTMLKLYTD 59
Query: 64 DAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
D+PGL++ P +VL++SL FI + LH+ K+ R
Sbjct: 60 DSPGLRVDPFIVLVLSLSFIASIFFLHISAKIIR 93
>gi|156407246|ref|XP_001641455.1| predicted protein [Nematostella vectensis]
gi|156228594|gb|EDO49392.1| predicted protein [Nematostella vectensis]
Length = 96
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VA RGS + G R+R G S + A +S+ M RFYT+D+PGLK+ P VL+MS
Sbjct: 21 VASRGS---SGGQLRQRKAGGSTASRTTRPTAASSSGMWRFYTEDSPGLKVGPVPVLVMS 77
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 78 LLFIASVFMLHIWGKYTR 95
>gi|336366155|gb|EGN94503.1| hypothetical protein SERLA73DRAFT_188437 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378822|gb|EGO19979.1| hypothetical protein SERLADRAFT_478544 [Serpula lacrymans var.
lacrymans S7.9]
Length = 99
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 9 STSSATSRPGVVAPRGSAAATA--GMRRRRVTGSSG---NGSGSVGGAGASTNMLRFYTD 63
S S A+ R G R SA A RRR GS N + + G G+S ML+ YTD
Sbjct: 2 SDSDASGRNGATTGRPSAVAKPPGAQIRRRAAGSQASRPNSTRAAGAGGSSGTMLKLYTD 61
Query: 64 DAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
D+PGL++ P +VL++SL FI + LH+ K+ R
Sbjct: 62 DSPGLRVDPFIVLVLSLSFIASIFFLHISAKIIR 95
>gi|260783809|ref|XP_002586964.1| hypothetical protein BRAFLDRAFT_269053 [Branchiostoma floridae]
gi|229272096|gb|EEN42975.1| hypothetical protein BRAFLDRAFT_269053 [Branchiostoma floridae]
Length = 94
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Query: 1 MARGSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRF 60
M SSQ++ S V PR A + +R+R+ S+ G G + M RF
Sbjct: 1 MPAPSSQTNVGSRAPASKAVTPR--AGGGSQLRQRKTPSSASRGQARA--TGNTAGMWRF 56
Query: 61 YTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
YT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 57 YTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 93
>gi|302845365|ref|XP_002954221.1| SEC61-beta subunit [Volvox carteri f. nagariensis]
gi|300260426|gb|EFJ44645.1| SEC61-beta subunit [Volvox carteri f. nagariensis]
Length = 91
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 32/45 (71%)
Query: 53 ASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
A N + FYTDD+PG K+SP VV+ MSL FI FVT LHV GK R
Sbjct: 46 AQQNTMNFYTDDSPGWKMSPVVVITMSLGFIAFVTILHVAGKFQR 90
>gi|294951367|ref|XP_002786945.1| Protein transport protein Sec61 subunit beta, putative [Perkinsus
marinus ATCC 50983]
gi|239901535|gb|EER18741.1| Protein transport protein Sec61 subunit beta, putative [Perkinsus
marinus ATCC 50983]
Length = 108
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 28 ATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVT 87
A + RR GSS + + G A ++L+FYTDDAPG+K+ PT VL++SL ++G V
Sbjct: 25 ARTNLLHRRNVGSSQKAAPASGRRAAGNSILKFYTDDAPGIKVGPTTVLVLSLAYMGCVV 84
Query: 88 ALHVFGKL 95
LH+ K
Sbjct: 85 CLHILAKF 92
>gi|221111885|ref|XP_002154626.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Hydra magnipapillata]
Length = 97
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 51 AGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
AG NM RFYT+D+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 50 AGGPQNMWRFYTEDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRQ 97
>gi|114153270|gb|ABI52801.1| Sec61 protein translocation complex beta-subunit [Argas
monolakensis]
Length = 97
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 1 MARGSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRF 60
M S ++ +A P APR A +T R+ GS G A M +F
Sbjct: 1 MPAAPSATNVGAAGRSPKTAAPRSGAGSTVKQRKTTSAGS-GRTRTPGAAAAGGGGMWKF 59
Query: 61 YTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
YTDDAPG+K+ P VL+MSL FI V LH++GK R
Sbjct: 60 YTDDAPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTR 96
>gi|452984079|gb|EME83836.1| hypothetical protein MYCFIDRAFT_187109 [Pseudocercospora fijiensis
CIRAD86]
Length = 507
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 9 STSSATSRPG-VVAPRGSAAA----TAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTD 63
+T + T+RP AP G A A A R+ R+ + + + G G+S+ MLR YTD
Sbjct: 410 TTGTTTARPASPKAPGGPATAIRRKAAADRQDRIASQRPSSTRAAGAGGSSSTMLRLYTD 469
Query: 64 DAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
++PGLK+ P VV+++S+ FI V ALH+ K +
Sbjct: 470 ESPGLKVDPFVVMVLSIGFIISVVALHIIAKFTK 503
>gi|158518468|ref|NP_001103514.1| Sec61 beta subunit [Xenopus (Silurana) tropicalis]
gi|134023845|gb|AAI35618.1| sec61b protein [Xenopus (Silurana) tropicalis]
Length = 96
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 8/80 (10%)
Query: 20 VAPRGSAAATAG--MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLL 77
VAPR TAG +R+R+ SS +G AG + M RFYT+D+PGLK+ P VL+
Sbjct: 22 VAPR-----TAGSTVRQRKNASSSTRSAGRTTSAG-TGGMWRFYTEDSPGLKVGPVPVLV 75
Query: 78 MSLCFIGFVTALHVFGKLYR 97
MSL FI V LH++GK R
Sbjct: 76 MSLLFIASVFMLHIWGKYTR 95
>gi|452842947|gb|EME44882.1| hypothetical protein DOTSEDRAFT_149564 [Dothistroma septosporum
NZE10]
Length = 112
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 5 SSQSSTSSATSRPG-VVAPRGSAAAT----AGMRRRRVTGSSGNGSGSVGGAGASTNMLR 59
+S +T + T+RP AP G A A A R +V + + + + G G+S+ MLR
Sbjct: 11 NSNPTTGTTTARPASPKAPGGPATAIRRKAAADRADKVANARPSSTRAAGAGGSSSTMLR 70
Query: 60 FYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
YTD++PGLK+ P VV+++S+ FI V ALH+ K +
Sbjct: 71 LYTDESPGLKVDPFVVMVLSIGFIISVVALHIIAKFTKR 109
>gi|169619245|ref|XP_001803035.1| hypothetical protein SNOG_12817 [Phaeosphaeria nodorum SN15]
gi|160703777|gb|EAT79617.2| hypothetical protein SNOG_12817 [Phaeosphaeria nodorum SN15]
Length = 77
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
G G+S+ MLR YTD++PGLK+ P VV+ +S+ FI V ALHV K+ R SA
Sbjct: 25 GAGGSSSTMLRLYTDESPGLKVDPVVVMTLSVVFIFSVVALHVIAKVMRRFSA 77
>gi|147904437|ref|NP_001080156.1| Sec61 beta subunit [Xenopus laevis]
gi|27370895|gb|AAH41270.1| Sec61b protein [Xenopus laevis]
gi|77748125|gb|AAI06322.1| Sec61b protein [Xenopus laevis]
Length = 96
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 8/80 (10%)
Query: 20 VAPRGSAAATAG--MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLL 77
VAPR TAG +R+R+ SS +G AG + M RFYT+D+PGLK+ P VL+
Sbjct: 22 VAPR-----TAGSTVRQRKNASSSTRSAGRTTSAG-TGGMWRFYTEDSPGLKVGPVPVLV 75
Query: 78 MSLCFIGFVTALHVFGKLYR 97
MSL FI V LH++GK R
Sbjct: 76 MSLLFIASVFMLHIWGKYTR 95
>gi|237843903|ref|XP_002371249.1| Sec61beta family protein [Toxoplasma gondii ME49]
gi|211968913|gb|EEB04109.1| Sec61beta family protein [Toxoplasma gondii ME49]
gi|221483798|gb|EEE22110.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221504198|gb|EEE29873.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 99
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 34 RRRVTGSSGNGSG----SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTAL 89
RRRVT G S S G +S +LRFYTDD PGLKI P VL+++LCF+ V L
Sbjct: 26 RRRVTAGGGASSAAGQRSRGVPASSQGILRFYTDDTPGLKIGPQTVLILTLCFMASVVLL 85
Query: 90 HVFGKLYR 97
H+ GK+++
Sbjct: 86 HIVGKVHQ 93
>gi|395331288|gb|EJF63669.1| Pre protein translocase Sec Sec61-beta subunit [Dichomitus
squalens LYAD-421 SS1]
Length = 92
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 22 PRGSAAATAGMR-RRRVTGSS---GNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLL 77
P+ A G + RRR GS N + + G G+S ML+ YTDD+PGL++ P +VL+
Sbjct: 9 PKTPVAKPPGAQIRRRAAGSQVSKPNSTRAAGAGGSSNTMLKLYTDDSPGLRVDPFIVLV 68
Query: 78 MSLCFIGFVTALHVFGKLYR 97
+SL FI + LH+ K+ R
Sbjct: 69 LSLSFIASIFFLHISAKIIR 88
>gi|407929053|gb|EKG21892.1| Preprotein translocase Sec Sec61-beta subunit [Macrophomina
phaseolina MS6]
Length = 112
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
G G+S+ MLR YTD++PGLK+ P VVL++S+ FI V ALHV K+ + SA
Sbjct: 60 GAGGSSSTMLRLYTDESPGLKVDPVVVLVLSVGFIISVVALHVIAKITKKFSA 112
>gi|307166034|gb|EFN60311.1| Protein transport protein Sec61 subunit beta [Camponotus
floridanus]
Length = 95
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
+APR + T R+ V S+ N + G M RFYTDD+PG+K+ P VL+MS
Sbjct: 21 IAPRTGGSGTVRQRKTTVASSARNRNTGTNSGG----MWRFYTDDSPGIKVGPVPVLVMS 76
Query: 80 LCFIGFVTALHVFGKLYRH 98
L FI V LH++GK R+
Sbjct: 77 LLFIASVFMLHIWGKYTRN 95
>gi|161669162|gb|ABX75433.1| srp-dependent cotranslational protein [Lycosa singoriensis]
Length = 95
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 1 MARGSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRF 60
M +S +S + + P +APR + +T ++R TG++ S + S M RF
Sbjct: 1 MPAPASATSVGAGSRSPKSMAPRAGSGSTV---KQRKTGNAAASSRTRSSGANSGGMWRF 57
Query: 61 YTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
YTDD+PG+K+ P VL +SL FI V LH++GK R
Sbjct: 58 YTDDSPGIKVGPVPVLCVSLLFIASVFMLHIWGKFNR 94
>gi|383859057|ref|XP_003705014.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Megachile rotundata]
Length = 95
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
+APR S + T R+R T ++ + GAG S M RFYTDD+PG+K+ P VL+MS
Sbjct: 21 IAPRTSGSGTV---RQRKTATTTSTRSRNTGAG-SDGMWRFYTDDSPGIKVGPVPVLVMS 76
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 77 LLFIASVFMLHIWGKYTR 94
>gi|195122970|ref|XP_002005983.1| GI20777 [Drosophila mojavensis]
gi|193911051|gb|EDW09918.1| GI20777 [Drosophila mojavensis]
Length = 109
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 2 ARGSSQSSTSSATSRPGVVAPRGSAAATAG--MRRRRVTGSSGNGSGSVGGAGASTNMLR 59
A SS S S + S + APR SA A G +++R+ T ++ S + GGAG + M R
Sbjct: 13 APASSTSVGSGSRSPSKLSAPR-SAGAGGGSTLKQRKTTTTTAARSRAPGGAG-TGGMWR 70
Query: 60 FYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
FYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 71 FYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNR 108
>gi|195028746|ref|XP_001987237.1| GH21806 [Drosophila grimshawi]
gi|195382290|ref|XP_002049863.1| GJ20512 [Drosophila virilis]
gi|193903237|gb|EDW02104.1| GH21806 [Drosophila grimshawi]
gi|194144660|gb|EDW61056.1| GJ20512 [Drosophila virilis]
Length = 99
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 2 ARGSSQSSTSSATSRPGVVAPRGSAAATAG--MRRRRVTGSSGNGSGSVGGAGASTNMLR 59
A SS S S + S + APR SA A G +++R+ T ++ S + GGAG + M R
Sbjct: 3 APASSTSVGSGSRSPSKLSAPR-SAGAGGGSTLKQRKTTTTTAARSRAPGGAG-TGGMWR 60
Query: 60 FYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
FYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 61 FYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNR 98
>gi|224924412|gb|ACN69156.1| Sec61 protein translocation complex, beta subunit [Stomoxys
calcitrans]
Length = 106
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 1 MARGSSQSSTSSATSRPGVV---APRGSAAATAGMRRRRVTGSSGNGSGS-VGGAGASTN 56
M +S +S S T P + APR A + +++R+ SS S G +
Sbjct: 5 MPAPASSTSVGSGTHSPSKLSSPAPRSGGAGGSNLKQRKTASSSTTAPRSRAAGGAGAGG 64
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 65 MWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNR 105
>gi|345561168|gb|EGX44265.1| hypothetical protein AOL_s00193g177 [Arthrobotrys oligospora ATCC
24927]
Length = 151
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 36/49 (73%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S+ ML+ YTD++PGLK+ P VVL++SL FI V ALH+ K+ R
Sbjct: 99 GAGGSSSTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVALHIIAKISR 147
>gi|255710261|gb|ACU30950.1| putative translocation complex beta subunit [Ochlerotatus
triseriatus]
Length = 88
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 21 APRGSAAA-TAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
APR S A ++ +++R+ T ++ G G S M RFYTDD+PG+K+ P VL+MS
Sbjct: 11 APRASGAGGSSNLKQRKTTTTTTAARNRTTGTG-SGGMWRFYTDDSPGIKVGPVPVLVMS 69
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V+ LH++GK R
Sbjct: 70 LLFIASVSMLHIWGKYTR 87
>gi|405954010|gb|EKC21558.1| transport protein Sec61 subunit beta [Crassostrea gigas]
Length = 138
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
V+PR +T R+R T SSG +V G G+ M RFYT+D+PG+K+ P VL+MS
Sbjct: 22 VSPRSGGGSTV---RQRKTPSSGGAKKAVAGGGSGAGMWRFYTEDSPGIKVGPVPVLVMS 78
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 79 LIFIASVFMLHIWGKYTR 96
>gi|443919623|gb|ELU39731.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 458
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 5 SSQSSTSSATSRPGVVAPR-GSAAAT-----AGMRRRRV---TGSSGNGSGSVGGAGAST 55
S S SS S P PR GS +A AG RRR T N + + G G+S+
Sbjct: 2 SDSSRPSSPVSAPTGQPPRPGSGSAISRPPGAGQVRRRANNQTAQKPNSARAAGAGGSSS 61
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
ML+ YTDD+ GL++ P VV+++SL FI + LH+ K+ R+
Sbjct: 62 TMLKLYTDDSQGLRVDPFVVMMLSLSFIASIFFLHISAKIVRY 104
>gi|449302574|gb|EMC98582.1| hypothetical protein BAUCODRAFT_65481 [Baudoinia compniacensis UAMH
10762]
Length = 507
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
+ G G+S+ MLR YTD++PGLK+ P VV+++SL FI V ALH+ KL +
Sbjct: 453 AAGAGGSSSTMLRLYTDESPGLKVDPFVVMVLSLGFIISVVALHIIAKLTK 503
>gi|402591434|gb|EJW85363.1| protein transporter Sec61 subunit beta [Wuchereria bancrofti]
Length = 88
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 17 PGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVL 76
PG A GS AT +R+RR S+G+G + G +S + RFYT+DA GLKI P VL
Sbjct: 8 PGRAARAGSGGAT--VRQRRGGPSAGSGRSARSGV-SSGGLWRFYTEDATGLKIGPVPVL 64
Query: 77 LMSLCFIGFVTALHVFGKLYR 97
+MSL FI V LH++GK R
Sbjct: 65 VMSLVFIASVFILHIWGKYTR 85
>gi|213401179|ref|XP_002171362.1| SNARE sec61 subunit beta [Schizosaccharomyces japonicus yFS275]
gi|211999409|gb|EEB05069.1| SNARE sec61 subunit beta [Schizosaccharomyces japonicus yFS275]
Length = 100
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 5 SSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSG------SVGGAGASTNML 58
SS ST S S PG AP G + +RRR S G + G G++ ML
Sbjct: 2 SSPKSTPSVKSSPGA-APGGPKSQ---IRRRAAAEKSKEGKALPAGPRAAGANGSTPTML 57
Query: 59 RFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
+ YTD+ G K+ P VV+++S+ FIG V ALH+ KL R
Sbjct: 58 KLYTDETSGFKVDPVVVMVLSVGFIGSVFALHIIAKLMRK 97
>gi|193599026|ref|XP_001952236.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Acyrthosiphon pisum]
Length = 96
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 13/79 (16%)
Query: 19 VVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLM 78
V+ R +AA T +R R TG+S G M RFYTDD+PG+K+ P VL+M
Sbjct: 30 VLRQRKTAAPTTSVRNRN-TGTSSGG------------MWRFYTDDSPGIKVGPVPVLVM 76
Query: 79 SLCFIGFVTALHVFGKLYR 97
SL FI V LH++GK R
Sbjct: 77 SLLFIASVFMLHIWGKYNR 95
>gi|398404818|ref|XP_003853875.1| hypothetical protein MYCGRDRAFT_91777 [Zymoseptoria tritici IPO323]
gi|339473758|gb|EGP88851.1| hypothetical protein MYCGRDRAFT_91777 [Zymoseptoria tritici IPO323]
Length = 112
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 12 SATSRPG-VVAPRGSAAAT----AGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAP 66
S T+RP AP G A A A R +V + + + + G G+S+ MLR YTD++P
Sbjct: 18 STTARPSSPKAPGGPATAIRRKAAADRADKVANARPSSTRAAGAGGSSSTMLRLYTDESP 77
Query: 67 GLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
GLK+ P VV+++S+ FI V ALH+ K +
Sbjct: 78 GLKVDPFVVMVLSIGFIISVVALHIIAKFTKR 109
>gi|449545478|gb|EMD36449.1| hypothetical protein CERSUDRAFT_115470 [Ceriporiopsis
subvermispora B]
Length = 99
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 34 RRRVTG---SSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
RRR G S N + + G G+S ML+ YTDD+PGL++ P +VL++SL FI + LH
Sbjct: 29 RRRAAGTQVSRPNSTRAAGAGGSSNTMLKLYTDDSPGLRVDPFIVLVLSLSFIASIFFLH 88
Query: 91 VFGKLYR 97
+ K+ R
Sbjct: 89 ISAKIIR 95
>gi|449272864|gb|EMC82578.1| Protein transport protein Sec61 subunit beta, partial [Columba
livia]
Length = 96
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 5 SSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDD 64
S+ S SS S VAPR +A +T R+ G+ G + G G M RFYT+D
Sbjct: 7 SATSVGSSGRSPSKAVAPR-AAGSTVRQRKNASCGTRSAGRATSTGTGG---MWRFYTED 62
Query: 65 APGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 63 SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>gi|350534558|ref|NP_001232155.1| putative protein transport protein SEC61 beta subunit variant 1
[Taeniopygia guttata]
gi|197127840|gb|ACH44338.1| putative protein transport protein SEC61 beta subunit variant 1
[Taeniopygia guttata]
gi|197127841|gb|ACH44339.1| putative protein transport protein SEC61 beta subunit variant 1
[Taeniopygia guttata]
gi|197127842|gb|ACH44340.1| putative protein transport protein SEC61 beta subunit variant 1
[Taeniopygia guttata]
Length = 96
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 5 SSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDD 64
S+ S SS S VAPR +A +T R+ G+ G + G G M RFYT+D
Sbjct: 7 SATSVGSSGRSPSKAVAPR-AAGSTVRQRKNASCGTRSAGRATSTGTGG---MWRFYTED 62
Query: 65 APGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 63 SPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 95
>gi|91083317|ref|XP_974792.1| PREDICTED: similar to AGAP011504-PA [Tribolium castaneum]
gi|270006931|gb|EFA03379.1| hypothetical protein TcasGA2_TC013365 [Tribolium castaneum]
Length = 94
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VAPR T +R+R+ T ++ + G+G M RFYTDD+PG+K+ P VL+MS
Sbjct: 21 VAPRSGGGGT--VRQRKTTSAAPARRNTGAGSG---GMWRFYTDDSPGIKVGPVPVLVMS 75
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 76 LLFIASVFMLHIWGKYTR 93
>gi|327275049|ref|XP_003222286.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Anolis carolinensis]
Length = 96
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VAPR +A +T R+ G+ G + G G M RFYT+D+PGLK+ P VL+MS
Sbjct: 22 VAPR-AAGSTVRQRKNASCGTRSAGRTTSAGTG---GMWRFYTEDSPGLKVGPVPVLVMS 77
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 78 LLFIASVFMLHIWGKYTR 95
>gi|389608493|dbj|BAM17856.1| sec61beta [Papilio xuthus]
Length = 97
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 3 RGSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYT 62
R S+SS +S G V R S T R R S+G GSG M RFYT
Sbjct: 15 RSPSKSSAVPRSSSGGTVRQRKSTTTTTAARNR----STGAGSG---------GMWRFYT 61
Query: 63 DDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
DD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 62 DDSPGVKVGPVPVLVMSLLFIASVFMLHIWGKYTR 96
>gi|388579410|gb|EIM19734.1| Pre protein translocase Sec Sec61-beta subunit [Wallemia sebi CBS
633.66]
Length = 87
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 22 PRGSAAATAGMRRRRVTGSS---GNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLM 78
PR A +RRR S N + + G G+S+ ML+ YTDD+PGLK+ P V++++
Sbjct: 5 PRSDRPHGAAIRRRTDKNSQVGKPNSARAAGAGGSSSTMLKLYTDDSPGLKVDPFVIVVL 64
Query: 79 SLCFIGFVTALHVFGKLYR 97
SL FI + LH+ K+ +
Sbjct: 65 SLAFIASIFFLHISAKVIK 83
>gi|18000273|gb|AAL54898.1|AF159543_1 transport protein Sec61 beta subunit [Lapemis hardwickii]
gi|387018500|gb|AFJ51368.1| Transport protein Sec61 beta subunit [Crotalus adamanteus]
Length = 96
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VAPR AT R+R S G + + + M RFYT+D+PGLK+ P VL+MS
Sbjct: 22 VAPR----ATGSTVRQRKNASCGTRNAGRSTSAGTGGMWRFYTEDSPGLKVGPVPVLVMS 77
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 78 LLFIASVFMLHIWGKYTR 95
>gi|326917329|ref|XP_003204952.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Meleagris gallopavo]
Length = 104
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VAPR +A +T R+ G+ G + G G M RFYT+D+PGLK+ P VL+MS
Sbjct: 30 VAPR-AAGSTVRQRKNASCGTRSAGRATSTGTGG---MWRFYTEDSPGLKVGPVPVLVMS 85
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 86 LLFIASVFMLHIWGKYTR 103
>gi|443684944|gb|ELT88733.1| hypothetical protein CAPTEDRAFT_175733 [Capitella teleta]
Length = 93
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGAST-NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
+R+R+ SSG AGAS M RFYT+D+PG+K+ P VL+MSL FI V LH
Sbjct: 30 VRQRKAPASSGPPKK----AGASAAGMWRFYTEDSPGIKVGPVPVLVMSLLFIASVFMLH 85
Query: 91 VFGKLYR 97
++GK R
Sbjct: 86 IWGKYTR 92
>gi|299116929|emb|CBN75039.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 68
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 32/39 (82%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
++RFYTDDAPGL+I PTVVL+ SL FIG V LH++GK
Sbjct: 28 IMRFYTDDAPGLRIGPTVVLVFSLAFIGCVVLLHIWGKF 66
>gi|426222261|ref|XP_004005315.1| PREDICTED: protein transport protein Sec61 subunit beta [Ovis
aries]
Length = 165
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 27 AATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFV 86
AA + +R+R+ S G S + + M RFYT+D+PGLK+ P VL+MSL FI V
Sbjct: 94 AAGSTVRQRKNNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASV 153
Query: 87 TALHVFGKLYR 97
LH++GK R
Sbjct: 154 FMLHIWGKYTR 164
>gi|443718659|gb|ELU09169.1| hypothetical protein CAPTEDRAFT_49690, partial [Capitella teleta]
Length = 88
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGAST-NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
+R+R+ SSG AGAS M RFYT+D+PG+K+ P VL+MSL FI V LH
Sbjct: 25 VRQRKAPASSGPPKK----AGASAAGMWRFYTEDSPGIKVGPVPVLVMSLLFIASVFMLH 80
Query: 91 VFGKLYR 97
++GK R
Sbjct: 81 IWGKYTR 87
>gi|357135252|ref|XP_003569225.1| PREDICTED: protein transport protein Sec61 subunit beta-like
isoform 1 [Brachypodium distachyon]
gi|357135254|ref|XP_003569226.1| PREDICTED: protein transport protein Sec61 subunit beta-like
isoform 2 [Brachypodium distachyon]
Length = 83
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ FI V LHVFGKLYR
Sbjct: 40 MLQFYTDEAAGRKMSPNAVLIMSIGFIAVVAVLHVFGKLYR 80
>gi|326527217|dbj|BAK04550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 83
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ FI V LHVFGKLYR
Sbjct: 40 MLQFYTDEAAGRKMSPNAVLIMSIGFIAVVAVLHVFGKLYR 80
>gi|443896035|dbj|GAC73379.1| FOG: Zn-finger [Pseudozyma antarctica T-34]
Length = 95
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 34 RRRVTGSSGNGSGS---VGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
RRR + N S G G+S+ M+R YTDD+ GL + P VVL++S+ F+ V LH
Sbjct: 25 RRRAAQQAANKPNSPRAAGAGGSSSTMMRLYTDDSKGLSVDPVVVLVLSIAFVFSVVLLH 84
Query: 91 VFGKLYR 97
+ GK R
Sbjct: 85 IIGKFMR 91
>gi|354487611|ref|XP_003505965.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Cricetulus griseus]
Length = 102
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYTDD+PGLK+ P VL+MSL FI V LH++G
Sbjct: 38 RQRKNASCGTRSAGRSTSAGTGGMWRFYTDDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 97
Query: 94 KLYR 97
K R
Sbjct: 98 KCTR 101
>gi|296414856|ref|XP_002837113.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632963|emb|CAZ81304.1| unnamed protein product [Tuber melanosporum]
Length = 158
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
G G+S+ ML+ YTD++PGLK+ P +VL++SL FI V A+HV K+ R +A
Sbjct: 106 GAGGSSSTMLKLYTDESPGLKVDPVIVLVLSLGFIFSVVAMHVIAKISRKWAA 158
>gi|156540298|ref|XP_001599008.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Nasonia vitripennis]
Length = 95
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 14/80 (17%)
Query: 18 GVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLL 77
G V R +A AT+ R R TG++ G M RFYTDD+PG+K+ P VL+
Sbjct: 29 GTVRQRKAAPATSA--RNRNTGTNSGG------------MWRFYTDDSPGIKVGPVPVLV 74
Query: 78 MSLCFIGFVTALHVFGKLYR 97
MSL FI V LH++GK R
Sbjct: 75 MSLLFIASVFMLHIWGKYTR 94
>gi|340712144|ref|XP_003394624.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Bombus terrestris]
Length = 94
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
+ PR T R+ T + +G+ S M RFYTDD+PG+K+ P VL+MS
Sbjct: 21 IVPRTGGGGTVRQRKNATTSTRSRNTGA-----GSDGMWRFYTDDSPGIKVGPVPVLVMS 75
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 76 LLFIASVFMLHIWGKYTR 93
>gi|50540124|ref|NP_001002527.1| protein transport protein Sec61 subunit beta [Danio rerio]
gi|49903122|gb|AAH76372.1| Zgc:92922 [Danio rerio]
gi|182888806|gb|AAI64234.1| Zgc:92922 protein [Danio rerio]
Length = 97
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 20 VAPRGSAAATAGM--RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLL 77
VAPR TAG R+R+ T SS G + + M RFYT+D+PGLK+ P VL+
Sbjct: 22 VAPR-----TAGTSARQRKATSSSARSGGRSTASAGTGGMWRFYTEDSPGLKVGPVPVLV 76
Query: 78 MSLCFIGFVTALHVFGKLYR 97
MSL FI V LH++GK R
Sbjct: 77 MSLLFIASVFMLHIWGKYTR 96
>gi|389610819|dbj|BAM19020.1| sec61beta [Papilio polytes]
Length = 97
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
Query: 22 PRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLC 81
PR S+ +T +R+R+ T ++ GAG S M RFYTDD+PG+K+ P VL+MSL
Sbjct: 24 PRSSSGST--VRQRKSTTTTTAARNRSTGAG-SGGMWRFYTDDSPGVKVGPVPVLVMSLL 80
Query: 82 FIGFVTALHVFGKLYR 97
FI V LH++GK R
Sbjct: 81 FIASVFMLHIWGKYTR 96
>gi|378731306|gb|EHY57765.1| protein transporter Sec61 subunit beta [Exophiala dermatitidis
NIH/UT8656]
Length = 169
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S MLR YTD++PGLK+ P VVL +SL FI V ALH+ K+ +
Sbjct: 116 SAGAGGSSGTMLRLYTDESPGLKVDPMVVLFLSLGFIFSVVALHLIAKITK 166
>gi|226509946|ref|NP_001151680.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195648556|gb|ACG43746.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195648765|gb|ACG43850.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|223948227|gb|ACN28197.1| unknown [Zea mays]
gi|414881461|tpg|DAA58592.1| TPA: protein transport protein Sec61 beta subunit isoform 1 [Zea
mays]
gi|414881462|tpg|DAA58593.1| TPA: protein transport protein Sec61 beta subunit isoform 2 [Zea
mays]
gi|414881463|tpg|DAA58594.1| TPA: protein transport protein Sec61 beta subunit isoform 3 [Zea
mays]
gi|414881464|tpg|DAA58595.1| TPA: protein transport protein Sec61 beta subunit isoform 4 [Zea
mays]
Length = 81
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ FI V LHVFGKLYR
Sbjct: 38 MLQFYTDEAAGRKMSPNTVLIMSIGFIAVVAMLHVFGKLYR 78
>gi|226500032|ref|NP_001151814.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|242053325|ref|XP_002455808.1| hypothetical protein SORBIDRAFT_03g025540 [Sorghum bicolor]
gi|195616442|gb|ACG30051.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195649877|gb|ACG44406.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|241927783|gb|EES00928.1| hypothetical protein SORBIDRAFT_03g025540 [Sorghum bicolor]
Length = 81
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ FI V LHVFGKLYR
Sbjct: 38 MLQFYTDEAAGRKMSPNTVLIMSIGFIAVVAMLHVFGKLYR 78
>gi|255941016|ref|XP_002561277.1| Pc16g09660 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585900|emb|CAP93636.1| Pc16g09660 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 124
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
S G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R SA
Sbjct: 70 SAGAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITRKFSA 124
>gi|425772891|gb|EKV11271.1| Translocon protein Sec61beta, putative [Penicillium digitatum
PHI26]
gi|425782118|gb|EKV20046.1| Translocon protein Sec61beta, putative [Penicillium digitatum Pd1]
Length = 124
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
S G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R SA
Sbjct: 70 SAGAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITRKFSA 124
>gi|62898329|dbj|BAD97104.1| protein translocation complex beta variant [Homo sapiens]
Length = 96
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 27 AATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFV 86
AA + +R+R+ G +G AG M RFYT+D+PGLK+ P VL+MSL FI V
Sbjct: 26 AAGSTVRQRKNAGCGTRSAGRTTSAGTG-RMWRFYTEDSPGLKVGPVPVLVMSLLFIASV 84
Query: 87 TALHVFGKLYR 97
LH++GK R
Sbjct: 85 FMLHIWGKYTR 95
>gi|357141741|ref|XP_003572331.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Brachypodium distachyon]
Length = 81
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ FI V LHVFGKLYR
Sbjct: 38 MLQFYTDEAAGRKMSPNAVLIMSVGFIAVVAVLHVFGKLYR 78
>gi|194692774|gb|ACF80471.1| unknown [Zea mays]
gi|195617778|gb|ACG30719.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|413950400|gb|AFW83049.1| hypothetical protein ZEAMMB73_850057 [Zea mays]
Length = 81
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ F+ V LHVFGKLYR
Sbjct: 38 MLQFYTDEAAGRKMSPNTVLIMSIGFVAVVAVLHVFGKLYR 78
>gi|119588283|gb|EAW67877.1| hCG1811289 [Homo sapiens]
Length = 96
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTWRMWRFYTEDSPGLKVGPVPVLVMSLLFISSVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|258565857|ref|XP_002583673.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907374|gb|EEP81775.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 142
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 90 GAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKITR 138
>gi|21356199|ref|NP_652037.1| Sec61beta [Drosophila melanogaster]
gi|194883034|ref|XP_001975609.1| GG20468 [Drosophila erecta]
gi|195334400|ref|XP_002033871.1| GM21558 [Drosophila sechellia]
gi|195486028|ref|XP_002091335.1| Sec61beta [Drosophila yakuba]
gi|195583428|ref|XP_002081524.1| GD11064 [Drosophila simulans]
gi|6002114|emb|CAB56698.1| sec61beta protein [Drosophila melanogaster]
gi|7303165|gb|AAF58229.1| Sec61beta [Drosophila melanogaster]
gi|17945446|gb|AAL48777.1| RE18615p [Drosophila melanogaster]
gi|38048293|gb|AAR10049.1| similar to Drosophila melanogaster Sec61beta, partial [Drosophila
yakuba]
gi|190658796|gb|EDV56009.1| GG20468 [Drosophila erecta]
gi|194125841|gb|EDW47884.1| GM21558 [Drosophila sechellia]
gi|194177436|gb|EDW91047.1| Sec61beta [Drosophila yakuba]
gi|194193533|gb|EDX07109.1| GD11064 [Drosophila simulans]
gi|211938503|gb|ACJ13148.1| FI02994p [Drosophila melanogaster]
gi|220951848|gb|ACL88467.1| Sec61beta-PA [synthetic construct]
gi|220959784|gb|ACL92435.1| Sec61beta-PA [synthetic construct]
Length = 100
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
GGAG + M RFYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 52 GGAG-TGGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYNR 99
>gi|410905315|ref|XP_003966137.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Takifugu rubripes]
Length = 97
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VAPR AA + +R+R+ T S G+ + M RFYT+D+PGLK+ P VL+MS
Sbjct: 22 VAPR---AAGSTVRQRKATSSGTRSGSRSTGSAGTGGMWRFYTEDSPGLKVGPVPVLVMS 78
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 79 LLFIASVFMLHIWGKYTR 96
>gi|119189729|ref|XP_001245471.1| hypothetical protein CIMG_04912 [Coccidioides immitis RS]
gi|303322877|ref|XP_003071430.1| Sec61beta family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240111132|gb|EER29285.1| Sec61beta family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320033510|gb|EFW15458.1| translocon protein Sec61beta [Coccidioides posadasii str. Silveira]
gi|392868363|gb|EJB11483.1| translocon protein Sec61beta [Coccidioides immitis RS]
Length = 126
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 74 GAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKITR 122
>gi|324533453|gb|ADY49306.1| Protein transport protein Sec61 subunit beta [Ascaris suum]
Length = 90
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 44/77 (57%)
Query: 21 APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSL 80
A R A TA +RR T SSG + G + + RFYT+DA GLKI P VL+MSL
Sbjct: 11 ATRTGTAGTAVRQRRGGTTSSGAARAARSGGVNNGGLWRFYTEDATGLKIGPVPVLVMSL 70
Query: 81 CFIGFVTALHVFGKLYR 97
FI V LH++GK R
Sbjct: 71 VFIASVFVLHIWGKYTR 87
>gi|47225454|emb|CAG11937.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 20 VAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMS 79
VAPR AA + +R+R+ T S G+ + M RFYT+D+PGLK+ P VL+MS
Sbjct: 24 VAPR---AAGSTVRQRKATSSGTRSGSRSTGSAGTGGMWRFYTEDSPGLKVGPVPVLVMS 80
Query: 80 LCFIGFVTALHVFGKLYR 97
L FI V LH++GK R
Sbjct: 81 LLFIASVFMLHIWGKYTR 98
>gi|391346792|ref|XP_003747652.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Metaseiulus occidentalis]
Length = 91
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 21 APRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSL 80
+PR ++T +R+R+ T +S + S M +FYTDD+PG K+ P VL+MS+
Sbjct: 16 SPRAGPSST--LRQRKTTSTSSAAARPSRPPANSGGMWKFYTDDSPGFKVGPVPVLVMSV 73
Query: 81 CFIGFVTALHVFGKLYR 97
FI V LH++GKL R
Sbjct: 74 LFIFSVFVLHMYGKLTR 90
>gi|315041583|ref|XP_003170168.1| hypothetical protein MGYG_07411 [Arthroderma gypseum CBS 118893]
gi|311345202|gb|EFR04405.1| hypothetical protein MGYG_07411 [Arthroderma gypseum CBS 118893]
Length = 119
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 67 GAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKITR 115
>gi|149898803|gb|ABR27863.1| Sec61 protein translocation complex beta subunit [Triatoma
infestans]
gi|344190604|gb|AEM97988.1| Sec61 protein translocation complex beta subunit [Dipetalogaster
maximus]
Length = 96
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Query: 19 VVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLM 78
+ APR S+A + +R+R+ T ++ S + A S M RFYTDD+PG+K+ P VL+M
Sbjct: 20 MAAPR-SSAGSGTVRQRKTTTTTAARSRNT--AANSGGMWRFYTDDSPGIKVGPVPVLVM 76
Query: 79 SLCFIGFVTALHVFGKLYR 97
SL FI V LH++GK R
Sbjct: 77 SLLFIASVFMLHIWGKYTR 95
>gi|358372071|dbj|GAA88676.1| translocon protein Sec61beta [Aspergillus kawachii IFO 4308]
Length = 127
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R SA
Sbjct: 75 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITRKFSA 127
>gi|209736406|gb|ACI69072.1| transport protein Sec61 subunit beta [Salmo salar]
Length = 81
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 51 AGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
AG + M RFYT+D+PGLK+ P VL+MSL FI V LH++GK R
Sbjct: 34 AGGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWGKYTR 80
>gi|296818271|ref|XP_002849472.1| translocon subunit [Arthroderma otae CBS 113480]
gi|238839925|gb|EEQ29587.1| translocon subunit [Arthroderma otae CBS 113480]
Length = 125
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 71 SAGAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKITR 121
>gi|327298401|ref|XP_003233894.1| hypothetical protein TERG_05762 [Trichophyton rubrum CBS 118892]
gi|326464072|gb|EGD89525.1| hypothetical protein TERG_05762 [Trichophyton rubrum CBS 118892]
Length = 124
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 72 GAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKITR 120
>gi|322694497|gb|EFY86325.1| glucosyl/glucuronosyl transferase, putative [Metarhizium acridum
CQMa 102]
Length = 1401
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + + S G G+S+ MLR YTD++PGLK+ P +VL++SL FI V ALH
Sbjct: 45 QKEKIANARPTSTRSAGAGGSSSTMLRLYTDESPGLKVDPVIVLVLSLVFIFSVVALHEM 104
Query: 93 GKLYRHKSAN 102
+L R + +
Sbjct: 105 CQLCRFQDVS 114
>gi|195634889|gb|ACG36913.1| protein transport protein Sec61 beta subunit [Zea mays]
Length = 81
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ F+ V LHVFGKLYR
Sbjct: 38 MLQFYTDEAAGRKMSPNTVLIMSIGFVAVVAVLHVFGKLYR 78
>gi|225563030|gb|EEH11309.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 120
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 67 SAGAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKISR 117
>gi|295673048|ref|XP_002797070.1| hypothetical protein PAAG_00929 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282442|gb|EEH38008.1| hypothetical protein PAAG_00929 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 120
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 68 GAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKITR 116
>gi|384497908|gb|EIE88399.1| hypothetical protein RO3G_13110 [Rhizopus delemar RA 99-880]
Length = 72
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 31 GMRRRRVTGSSGNGSGSVGGAGAST-NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTAL 89
G R+RVT S +G G G ST NM+ Y+DDAPGL++ P VVL++SL FI V L
Sbjct: 8 GTIRKRVTSRSNTNTGRGGMPGGSTSNMMSIYSDDAPGLRVDPVVVLVLSLTFIASVFGL 67
Query: 90 HV 91
H+
Sbjct: 68 HI 69
>gi|350398914|ref|XP_003485349.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Bombus impatiens]
Length = 95
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 50 GAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
GAG S M RFYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 48 GAG-SDGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTR 94
>gi|240279850|gb|EER43355.1| translocon protein Sec61beta [Ajellomyces capsulatus H143]
gi|325092978|gb|EGC46288.1| translocon protein Sec61beta [Ajellomyces capsulatus H88]
Length = 164
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 111 SAGAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKISR 161
>gi|195618718|gb|ACG31189.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195637892|gb|ACG38414.1| protein transport protein Sec61 beta subunit [Zea mays]
Length = 44
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ F+ V LHVFGKLYR
Sbjct: 1 MLQFYTDEAAGRKMSPNTVLIMSIGFVAVVAVLHVFGKLYR 41
>gi|112983408|ref|NP_001037632.1| transport protein Sec61 beta subunit [Bombyx mori]
gi|87248599|gb|ABD36352.1| transport protein Sec61 beta protein [Bombyx mori]
gi|107953794|gb|ABF85698.1| transport protein Sec61 beta subunit [Bombyx mori]
Length = 97
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 50 GAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
GAG S M RFYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 50 GAG-SGGMWRFYTDDSPGVKVGPVPVLVMSLLFIASVFMLHIWGKYTR 96
>gi|50555510|ref|XP_505163.1| YALI0F08481p [Yarrowia lipolytica]
gi|42559879|sp|Q9HFC7.1|SC61B_YARLI RecName: Full=Protein transport protein Sec61 subunit beta
gi|10697176|emb|CAC12697.1| translocon subunit [Yarrowia lipolytica]
gi|49651033|emb|CAG77970.1| YALI0F08481p [Yarrowia lipolytica CLIB122]
Length = 91
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
SVG G+S+ ML+ YTD++ GLK+ P VV+++SL FI V ALH+ K+
Sbjct: 37 SVGAGGSSSTMLKLYTDESQGLKVDPVVVMVLSLGFIFSVVALHILAKV 85
>gi|126335113|ref|XP_001365177.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Monodelphis domestica]
Length = 107
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 26 AAATAG-MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIG 84
AA TAG R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI
Sbjct: 34 AARTAGSTVRQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIA 93
Query: 85 FVTALHVFGKLYR 97
V LH++GK R
Sbjct: 94 SVFMLHIWGKYTR 106
>gi|115437698|ref|NP_001043359.1| Os01g0565900 [Oryza sativa Japonica Group]
gi|113532890|dbj|BAF05273.1| Os01g0565900 [Oryza sativa Japonica Group]
gi|125570852|gb|EAZ12367.1| hypothetical protein OsJ_02256 [Oryza sativa Japonica Group]
gi|215686842|dbj|BAG89692.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 80
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ FI V LHVFGKLYR
Sbjct: 37 MLQFYTDEAAGRKMSPNSVLIMSIGFIAVVALLHVFGKLYR 77
>gi|13324684|ref|NP_077133.1| protein transport protein Sec61 subunit beta [Mus musculus]
gi|348570308|ref|XP_003470939.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Cavia porcellus]
gi|42559877|sp|Q9CQS8.3|SC61B_MOUSE RecName: Full=Protein transport protein Sec61 subunit beta
gi|12805253|gb|AAH02089.1| Sec61 beta subunit [Mus musculus]
gi|12835723|dbj|BAB23338.1| unnamed protein product [Mus musculus]
gi|12843121|dbj|BAB25868.1| unnamed protein product [Mus musculus]
gi|51859576|gb|AAH81445.1| Sec61 beta subunit [Mus musculus]
gi|148670402|gb|EDL02349.1| mCG7378 [Mus musculus]
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIAAVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|440905026|gb|ELR55474.1| Protein transport protein Sec61 subunit beta, partial [Bos
grunniens mutus]
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|157820673|ref|NP_001100124.1| protein transport protein Sec61 subunit beta [Rattus norvegicus]
gi|149020215|gb|EDL78204.1| Sec61 beta subunit (predicted) [Rattus norvegicus]
gi|187469822|gb|AAI67110.1| Sec61 beta subunit [Rattus norvegicus]
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|355567589|gb|EHH23930.1| Protein transport protein Sec61 subunit beta, partial [Macaca
mulatta]
gi|444525778|gb|ELV14155.1| Protein transport protein Sec61 subunit beta, partial [Tupaia
chinensis]
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|432110711|gb|ELK34188.1| Protein transport protein Sec61 subunit beta [Myotis davidii]
Length = 178
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 114 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 173
Query: 94 KLYR 97
K R
Sbjct: 174 KYTR 177
>gi|414881468|tpg|DAA58599.1| TPA: hypothetical protein ZEAMMB73_842470 [Zea mays]
Length = 81
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+M + FI V LHVFGKLYR
Sbjct: 38 MLQFYTDEAAGRKMSPNTVLIMGIGFIAIVAMLHVFGKLYR 78
>gi|407262073|ref|XP_003945990.1| PREDICTED: protein transport protein Sec61 subunit beta-like [Mus
musculus]
gi|407263914|ref|XP_003945570.1| PREDICTED: protein transport protein Sec61 subunit beta-like [Mus
musculus]
Length = 102
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 25 SAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIG 84
+A +T R+ G+ G + G G M RFYT+D+PGLK+ P VL+MSL FI
Sbjct: 32 AAGSTVRQRKNASCGTRSTGRTTSAGTGG---MWRFYTEDSPGLKVGPVPVLVMSLLFIA 88
Query: 85 FVTALHVFGKLYR 97
V LH++GK R
Sbjct: 89 SVFMLHIWGKYTR 101
>gi|125526461|gb|EAY74575.1| hypothetical protein OsI_02463 [Oryza sativa Indica Group]
Length = 80
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+A G K+SP VL+MS+ FI V LHVFGKLYR
Sbjct: 37 MLQFYTDEAAGRKMSPNSVLIMSIGFIAVVALLHVFGKLYR 77
>gi|115497008|ref|NP_001068760.1| protein transport protein Sec61 subunit beta [Bos taurus]
gi|84202411|gb|AAI11653.1| Sec61 beta subunit [Bos taurus]
gi|296484639|tpg|DAA26754.1| TPA: Sec61 beta subunit [Bos taurus]
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|395515387|ref|XP_003761886.1| PREDICTED: protein transport protein Sec61 subunit beta
[Sarcophilus harrisii]
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|225680711|gb|EEH18995.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226292394|gb|EEH47814.1| predicted protein [Paracoccidioides brasiliensis Pb18]
Length = 121
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 69 GAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKVTR 117
>gi|281341251|gb|EFB16835.1| hypothetical protein PANDA_002907 [Ailuropoda melanoleuca]
gi|351699363|gb|EHB02282.1| Protein transport protein Sec61 subunit beta, partial
[Heterocephalus glaber]
Length = 95
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 31 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 90
Query: 94 KLYR 97
K R
Sbjct: 91 KYTR 94
>gi|5803165|ref|NP_006799.1| protein transport protein Sec61 subunit beta [Homo sapiens]
gi|50979317|ref|NP_001003326.1| protein transport protein Sec61 subunit beta [Canis lupus
familiaris]
gi|207079843|ref|NP_001129010.1| protein transport protein Sec61 subunit beta [Pongo abelii]
gi|345091075|ref|NP_001230754.1| Sec61 beta subunit [Sus scrofa]
gi|388454356|ref|NP_001253867.1| protein transport protein Sec61 subunit beta [Macaca mulatta]
gi|291382907|ref|XP_002707994.1| PREDICTED: Sec61 beta subunit [Oryctolagus cuniculus]
gi|296190402|ref|XP_002743182.1| PREDICTED: protein transport protein Sec61 subunit beta
[Callithrix jacchus]
gi|301758246|ref|XP_002914972.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Ailuropoda melanoleuca]
gi|332222886|ref|XP_003260602.1| PREDICTED: protein transport protein Sec61 subunit beta isoform 1
[Nomascus leucogenys]
gi|332832460|ref|XP_001157550.2| PREDICTED: protein transport protein Sec61 subunit beta [Pan
troglodytes]
gi|338720278|ref|XP_003364147.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Equus caballus]
gi|354475859|ref|XP_003500144.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Cricetulus griseus]
gi|395823902|ref|XP_003785215.1| PREDICTED: protein transport protein Sec61 subunit beta [Otolemur
garnettii]
gi|397499921|ref|XP_003820680.1| PREDICTED: protein transport protein Sec61 subunit beta isoform 1
[Pan paniscus]
gi|402896855|ref|XP_003911498.1| PREDICTED: protein transport protein Sec61 subunit beta [Papio
anubis]
gi|403298663|ref|XP_003940131.1| PREDICTED: protein transport protein Sec61 subunit beta [Saimiri
boliviensis boliviensis]
gi|410978664|ref|XP_003995709.1| PREDICTED: protein transport protein Sec61 subunit beta [Felis
catus]
gi|426362487|ref|XP_004048395.1| PREDICTED: protein transport protein Sec61 subunit beta [Gorilla
gorilla gorilla]
gi|42560363|sp|P60467.2|SC61B_CANFA RecName: Full=Protein transport protein Sec61 subunit beta
gi|42560366|sp|P60468.2|SC61B_HUMAN RecName: Full=Protein transport protein Sec61 subunit beta
gi|83288344|sp|Q5RB31.3|SC61B_PONAB RecName: Full=Protein transport protein Sec61 subunit beta
gi|270346370|pdb|2WWB|C Chain C, Cryo-Em Structure Of The Mammalian Sec61 Complex Bound
To The Actively Translating Wheat Germ 80s Ribosome
gi|459746|gb|AAA19639.1| protein translocation complex beta subunit [Canis lupus
familiaris]
gi|459834|gb|AAA19706.1| Sec61-complex beta-subunit [Homo sapiens]
gi|12804623|gb|AAH01734.1| Sec61 beta subunit [Homo sapiens]
gi|48145883|emb|CAG33164.1| SEC61B [Homo sapiens]
gi|49457314|emb|CAG46956.1| SEC61B [Homo sapiens]
gi|55728575|emb|CAH91029.1| hypothetical protein [Pongo abelii]
gi|119579316|gb|EAW58912.1| Sec61 beta subunit [Homo sapiens]
gi|344251840|gb|EGW07944.1| Protein transport protein Sec61 subunit beta [Cricetulus griseus]
gi|380809066|gb|AFE76408.1| protein transport protein Sec61 subunit beta [Macaca mulatta]
gi|383414683|gb|AFH30555.1| protein transport protein Sec61 subunit beta [Macaca mulatta]
gi|384942746|gb|AFI34978.1| protein transport protein Sec61 subunit beta [Macaca mulatta]
gi|410223744|gb|JAA09091.1| Sec61 beta subunit [Pan troglodytes]
gi|410332875|gb|JAA35384.1| Sec61 beta subunit [Pan troglodytes]
gi|417395620|gb|JAA44862.1| Putative sec61 protein translocation complex beta subunit
[Desmodus rotundus]
gi|740571|prf||2005371A Sec61 protein:SUBUNIT=beta
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|242802848|ref|XP_002484057.1| translocon protein Sec61beta, putative [Talaromyces stipitatus ATCC
10500]
gi|218717402|gb|EED16823.1| translocon protein Sec61beta, putative [Talaromyces stipitatus ATCC
10500]
Length = 128
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R+
Sbjct: 76 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITRN 125
>gi|355753167|gb|EHH57213.1| Protein transport protein Sec61 subunit beta, partial [Macaca
fascicularis]
Length = 96
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|170046266|ref|XP_001850693.1| hypothetical protein CpipJ_CPIJ009025 [Culex quinquefasciatus]
gi|167869085|gb|EDS32468.1| hypothetical protein CpipJ_CPIJ009025 [Culex quinquefasciatus]
Length = 100
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 59 MWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTR 99
>gi|327354418|gb|EGE83275.1| translocon protein Sec61beta [Ajellomyces dermatitidis ATCC 18188]
Length = 121
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD++PG K+ P VVL++SL FI V LHV K+ R
Sbjct: 67 SAGAGGSSGTMLKLYTDESPGFKVDPVVVLVLSLGFIFSVVGLHVIAKITR 117
>gi|261188222|ref|XP_002620527.1| translocon protein Sec61beta [Ajellomyces dermatitidis SLH14081]
gi|239593274|gb|EEQ75855.1| translocon protein Sec61beta [Ajellomyces dermatitidis SLH14081]
gi|239609321|gb|EEQ86308.1| translocon protein Sec61beta [Ajellomyces dermatitidis ER-3]
Length = 121
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD++PG K+ P VVL++SL FI V LHV K+ R
Sbjct: 67 SAGAGGSSGTMLKLYTDESPGFKVDPVVVLVLSLGFIFSVVGLHVIAKITR 117
>gi|109131069|ref|XP_001102187.1| PREDICTED: protein transport protein Sec61 subunit beta [Macaca
mulatta]
gi|355758770|gb|EHH61515.1| hypothetical protein EGM_21247 [Macaca fascicularis]
Length = 96
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|291231555|ref|XP_002735727.1| PREDICTED: Sec61 beta subunit-like [Saccoglossus kowalevskii]
Length = 98
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 4 GSSQSSTSSATSRPG-VVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYT 62
G + SST+ PG VAPR + R+ T + + GG G+S M RFYT
Sbjct: 3 GPAASSTNVGGRSPGKAVAPRSGGGSQVRQRKSAGTAAGRTRVAASGGGGSSGGMWRFYT 62
Query: 63 DDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
+D+PG+KI P VL+MSL FI V LH++GK R
Sbjct: 63 EDSPGVKIGPVPVLVMSLLFIASVFMLHIWGKYTR 97
>gi|145229007|ref|XP_001388812.1| transport protein sec61 subunit beta [Aspergillus niger CBS 513.88]
gi|134054908|emb|CAK36920.1| unnamed protein product [Aspergillus niger]
Length = 127
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R
Sbjct: 75 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITR 123
>gi|357612399|gb|EHJ67968.1| transport protein Sec61 beta subunit [Danaus plexippus]
Length = 97
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
M RFYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 56 MWRFYTDDSPGVKVGPVPVLVMSLLFIASVFMLHIWGKYTR 96
>gi|242007433|ref|XP_002424544.1| protein transport protein Sec61 subunit beta, putative [Pediculus
humanus corporis]
gi|212507987|gb|EEB11806.1| protein transport protein Sec61 subunit beta, putative [Pediculus
humanus corporis]
Length = 103
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 51 AGASTN-MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
AGA++ M RFYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 55 AGANSGGMWRFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTR 102
>gi|195639308|gb|ACG39122.1| protein transport protein Sec61 beta subunit [Zea mays]
gi|195657837|gb|ACG48386.1| protein transport protein Sec61 beta subunit [Zea mays]
Length = 81
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
ML+FYTD+ G K+SP VL+MS+ F+ V LHVFGKLYR
Sbjct: 38 MLQFYTDETAGRKMSPNTVLIMSIGFVAVVAVLHVFGKLYR 78
>gi|350638004|gb|EHA26360.1| hypothetical protein ASPNIDRAFT_128153 [Aspergillus niger ATCC
1015]
Length = 131
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R
Sbjct: 79 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITR 127
>gi|121702813|ref|XP_001269671.1| translocon protein Sec61beta, putative [Aspergillus clavatus NRRL
1]
gi|119397814|gb|EAW08245.1| translocon protein Sec61beta, putative [Aspergillus clavatus NRRL
1]
Length = 166
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R
Sbjct: 114 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITR 162
>gi|323507666|emb|CBQ67537.1| probable protein transport protein sec61 beta subunit [Sporisorium
reilianum SRZ2]
Length = 95
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 43 NGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
N + + G G+S+ M+R YTDD+ GL + P VVL++S+ F+ V LH+ GK R S
Sbjct: 37 NSTRAAGAGGSSSTMMRLYTDDSKGLSVDPVVVLVLSIAFVFSVVLLHIIGKFMRWFS 94
>gi|388852456|emb|CCF53858.1| probable protein transport protein sec61 beta subunit [Ustilago
hordei]
Length = 92
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 43 NGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
N + + G G+S+ M+R YTDD+ GL + P VVL++S+ F+ V LH+ GK R S
Sbjct: 34 NSTRAAGAGGSSSTMMRLYTDDSKGLSVDPVVVLVLSIAFVFSVVLLHIIGKFMRWFS 91
>gi|321472343|gb|EFX83313.1| hypothetical protein DAPPUDRAFT_230689 [Daphnia pulex]
gi|321472344|gb|EFX83314.1| hypothetical protein DAPPUDRAFT_315783 [Daphnia pulex]
Length = 100
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 50 GAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G +S M +FYTDD+PG+K+ P VL+MSL FI V LH++GK R
Sbjct: 52 GGTSSGGMWKFYTDDSPGVKVGPVPVLVMSLLFIASVFLLHIWGKYTR 99
>gi|344271576|ref|XP_003407613.1| PREDICTED: hypothetical protein LOC100655717 [Loxodonta africana]
Length = 219
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M RFYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 155 RQRKNASCGTRSAGRTTSAGTGGMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 214
Query: 94 KLYR 97
K R
Sbjct: 215 KYTR 218
>gi|212540094|ref|XP_002150202.1| translocon protein Sec61beta, putative [Talaromyces marneffei ATCC
18224]
gi|210067501|gb|EEA21593.1| translocon protein Sec61beta, putative [Talaromyces marneffei ATCC
18224]
Length = 168
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+R R T + G+G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV
Sbjct: 104 LRNARPTSTRAAGAG-----GSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHV 158
Query: 92 FGKLYRHKSA 101
K+ R+ S+
Sbjct: 159 IAKITRNFSS 168
>gi|238486478|ref|XP_002374477.1| translocon protein Sec61beta, putative [Aspergillus flavus
NRRL3357]
gi|317144223|ref|XP_001819982.2| transport protein sec61 subunit beta [Aspergillus oryzae RIB40]
gi|220699356|gb|EED55695.1| translocon protein Sec61beta, putative [Aspergillus flavus
NRRL3357]
gi|391867834|gb|EIT77073.1| hypothetical protein Ao3042_06753 [Aspergillus oryzae 3.042]
Length = 128
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R
Sbjct: 76 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITR 124
>gi|83767841|dbj|BAE57980.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 146
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R
Sbjct: 94 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITR 142
>gi|115388605|ref|XP_001211808.1| predicted protein [Aspergillus terreus NIH2624]
gi|114195892|gb|EAU37592.1| predicted protein [Aspergillus terreus NIH2624]
Length = 127
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R
Sbjct: 75 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITR 123
>gi|256074081|ref|XP_002573355.1| hypothetical protein [Schistosoma mansoni]
gi|360043493|emb|CCD78906.1| hypothetical protein Smp_019060 [Schistosoma mansoni]
Length = 88
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 22 PRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLC 81
PRGSA G R+R+ SS V + FY++D+PG+K+ P VL+MSLC
Sbjct: 16 PRGSAG---GARQRKAPASSARRP--VAPTAQKNPVFLFYSEDSPGIKVGPVPVLVMSLC 70
Query: 82 FIGFVTALHVFGKLYR 97
FI V LH +GK R
Sbjct: 71 FIVSVFLLHFWGKYTR 86
>gi|119496805|ref|XP_001265176.1| translocon protein Sec61beta, putative [Neosartorya fischeri NRRL
181]
gi|119413338|gb|EAW23279.1| translocon protein Sec61beta, putative [Neosartorya fischeri NRRL
181]
Length = 131
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R
Sbjct: 79 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITR 127
>gi|154280354|ref|XP_001540990.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412933|gb|EDN08320.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 285
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 232 SAGAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKISR 282
>gi|70990778|ref|XP_750238.1| translocon protein Sec61beta [Aspergillus fumigatus Af293]
gi|66847870|gb|EAL88200.1| translocon protein Sec61beta, putative [Aspergillus fumigatus
Af293]
gi|159130714|gb|EDP55827.1| translocon protein Sec61beta, putative [Aspergillus fumigatus
A1163]
Length = 131
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGL++ P VVL++SL FI V LHV K+ R
Sbjct: 79 GAGGSSGTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLHVIAKITR 127
>gi|221053462|ref|XP_002258105.1| Protein-transport protein sec61 beta 1 subunit [Plasmodium
knowlesi strain H]
gi|193807938|emb|CAQ38642.1| Protein-transport protein sec61 beta 1 subunit,putative
[Plasmodium knowlesi strain H]
Length = 79
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 33 RRRRVTGSSGNGSGSVG-GAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
RRR+ TGS+ N + G +G S ++++FY DD+PG K++P VL+ +L F+ V LH+
Sbjct: 16 RRRQSTGSASNNAKPRGSNSGNSNSIVKFYGDDSPGFKLTPQTVLISTLIFMATVVILHI 75
Query: 92 FGKL 95
K+
Sbjct: 76 ISKI 79
>gi|355704881|gb|EHH30806.1| hypothetical protein EGK_20591 [Macaca mulatta]
Length = 96
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
R+R S G S + + M +FYT+D+PGLK+ P VL+MSL FI V LH++G
Sbjct: 32 RQRKNASCGTRSAGRTTSAGTGGMWQFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHIWG 91
Query: 94 KLYR 97
K R
Sbjct: 92 KYTR 95
>gi|115942918|ref|XP_001176097.1| PREDICTED: protein transport protein Sec61 subunit beta-like
isoform 1 [Strongylocentrotus purpuratus]
Length = 97
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+R+R+ G++ G + +G M RFYT+D+PGLK+ P VL+MSL FI V LH+
Sbjct: 34 VRQRKSAGATTRGRTAGSNSGG---MWRFYTEDSPGLKVGPVPVLVMSLIFIASVFMLHI 90
Query: 92 FGKLYR 97
+GK R
Sbjct: 91 WGKYTR 96
>gi|115923611|ref|XP_001187801.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Strongylocentrotus purpuratus]
Length = 117
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+R+R+ G++ G + +G M RFYT+D+PGLK+ P VL+MSL FI V LH+
Sbjct: 54 VRQRKSAGATTRGRTAGSNSGG---MWRFYTEDSPGLKVGPVPVLVMSLIFIASVFMLHI 110
Query: 92 FGKLYR 97
+GK R
Sbjct: 111 WGKYTR 116
>gi|297728897|ref|NP_001176812.1| Os12g0173366 [Oryza sativa Japonica Group]
gi|77553785|gb|ABA96581.1| Sec61beta family protein, expressed [Oryza sativa Japonica Group]
gi|125535942|gb|EAY82430.1| hypothetical protein OsI_37643 [Oryza sativa Indica Group]
gi|125578660|gb|EAZ19806.1| hypothetical protein OsJ_35385 [Oryza sativa Japonica Group]
gi|215768668|dbj|BAH00897.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255670093|dbj|BAH95540.1| Os12g0173366 [Oryza sativa Japonica Group]
Length = 83
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 32/44 (72%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
ML+FYT++A G K+SP VL+MS+ F V LHVFGKLYR S
Sbjct: 39 MLQFYTEEAAGCKMSPNAVLIMSIGFFAVVALLHVFGKLYRTSS 82
>gi|281202427|gb|EFA76630.1| dynactin 50 kDa subunit [Polysphondylium pallidum PN500]
Length = 479
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
M+R V + +V G NMLR+Y++DA GLK+ P VL+ SL FIGFV LH+
Sbjct: 1 MKRVNV-APTNRAPATVAKGGNGNNMLRYYSEDAIGLKVGPQAVLIASLSFIGFVILLHI 59
Query: 92 F 92
+
Sbjct: 60 W 60
>gi|66816257|ref|XP_642138.1| protein transport protein SEC61 beta subunit [Dictyostelium
discoideum AX4]
gi|74856781|sp|Q54YR4.1|SC61B_DICDI RecName: Full=Protein transport protein Sec61 subunit beta
gi|60470251|gb|EAL68231.1| protein transport protein SEC61 beta subunit [Dictyostelium
discoideum AX4]
Length = 61
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 56 NMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
+M++FY++DA GLK+ PT VL MSL FI FV LH+ GK R
Sbjct: 19 SMMKFYSEDAIGLKVGPTAVLFMSLIFIAFVIILHIMGKYTR 60
>gi|164659526|ref|XP_001730887.1| hypothetical protein MGL_1886 [Malassezia globosa CBS 7966]
gi|159104785|gb|EDP43673.1| hypothetical protein MGL_1886 [Malassezia globosa CBS 7966]
Length = 123
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 5 SSQSSTSSATSRPGVVAPRGSAAA--TAGMRRRR-VTGSSGNGSGSVGGAGASTN-MLRF 60
+SQS T P A + A+ ++ MRR+ V ++ S GAG STN MLR
Sbjct: 23 TSQSEKKQGTHTPLTQAQLAALASRNSSVMRRKAAVQAANKPHSAREAGAGGSTNTMLRL 82
Query: 61 YTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
T+D GL + P +VL++S+ F+ V LH+ GK+ R
Sbjct: 83 NTEDNKGLNVDPVIVLVLSVAFVLSVVLLHILGKVAR 119
>gi|406607165|emb|CCH41426.1| hypothetical protein BN7_967 [Wickerhamomyces ciferrii]
Length = 89
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 45 SGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
S S G G+S N+L+ YTD+A GLK+ P VVL +++ FI V ALHV KL
Sbjct: 33 SRSAGFGGSSANLLKLYTDEAQGLKVDPLVVLFLAVGFIFSVIALHVIAKL 83
>gi|313215775|emb|CBY16343.1| unnamed protein product [Oikopleura dioica]
Length = 97
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 10/71 (14%)
Query: 32 MRRRRVTGSSG-----NGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFV 86
+R+R+ G++ N SG +G M +FYT+D+PG+K+ P VL+MSL FI V
Sbjct: 30 VRQRKAGGATKAKTTTNPSGQMG-----NGMWKFYTEDSPGIKVGPVPVLVMSLMFIASV 84
Query: 87 TALHVFGKLYR 97
LH++GK R
Sbjct: 85 FILHIWGKYTR 95
>gi|110755262|ref|XP_001119885.1| PREDICTED: protein transport protein Sec61 subunit beta [Apis
mellifera]
gi|380030427|ref|XP_003698850.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Apis florea]
Length = 94
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 50 GAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGK 94
GAG S M FYTDD+PG+K+ P VL+MSL FI V LH++GK
Sbjct: 47 GAG-SDEMWMFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGK 90
>gi|431909858|gb|ELK12960.1| Protein transport protein Sec61 subunit beta [Pteropus alecto]
Length = 246
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+R+ G+ G + G G M RFYT+D+PGLK+ P VL+MSL FI V LH+
Sbjct: 183 LRKNASCGTRSAGRTTSAGTG---GMWRFYTEDSPGLKVGPVPVLVMSLLFIASVFMLHI 239
Query: 92 FGKLYR 97
+GK R
Sbjct: 240 WGKYTR 245
>gi|340378377|ref|XP_003387704.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Amphimedon queenslandica]
Length = 83
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 24 GSAAATAGMRRRRVTGSSG--NGSGSVGGAGASTNMLRFYT-DDAPGLKISPTVVLLMSL 80
GS + AG R+R SSG + GGAG +M +FY+ DD+PG++I P VL+MSL
Sbjct: 9 GSKSPRAGARKRVSAPSSGVRARQPTAGGAG---SMFKFYSGDDSPGIQIGPVPVLVMSL 65
Query: 81 CFIGFVTALHVFGKLYR 97
FI V LH++GK R
Sbjct: 66 LFIAVVFLLHIWGKYTR 82
>gi|325190953|emb|CCA25438.1| ribosomal protein S17 putative [Albugo laibachii Nc14]
Length = 178
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVT 87
+R + + N + G G+S +LRFYTDD+PGLKI PT VL++ L F+G V+
Sbjct: 27 KRPQASAKHANANTGRGMGGSSAGILRFYTDDSPGLKIGPTTVLVLCLVFVGLVS 81
>gi|302507728|ref|XP_003015825.1| hypothetical protein ARB_06137 [Arthroderma benhamiae CBS 112371]
gi|291179393|gb|EFE35180.1| hypothetical protein ARB_06137 [Arthroderma benhamiae CBS 112371]
Length = 220
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD++PGLK+ P VVL++SL FI V LHV K+ R
Sbjct: 67 GAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLHVIAKITR 115
>gi|389582438|dbj|GAB65176.1| protein transport protein sec61 beta 1 subunit [Plasmodium
cynomolgi strain B]
Length = 79
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTN-MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
RRR+ TGS+ N + G +TN +++FY DD+PG K++P VL+ +L F+ V LH+
Sbjct: 16 RRRQSTGSASNSARPRGSNSGNTNSIVKFYGDDSPGFKLTPQTVLISTLIFMATVVILHI 75
Query: 92 FGKL 95
K+
Sbjct: 76 ISKI 79
>gi|387203798|gb|AFJ69001.1| hypothetical protein NGATSA_3027100 [Nannochloropsis gaditana
CCMP526]
Length = 106
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 53 ASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
+S +LRFY+D+APGL++ P VVL+ SL FIG V LH++ K
Sbjct: 61 SSAGILRFYSDEAPGLRVGPQVVLVSSLAFIGVVVLLHIWAKF 103
>gi|296005058|ref|XP_002808866.1| Sec61 beta subunit, putative [Plasmodium falciparum 3D7]
gi|225632263|emb|CAX64144.1| Sec61 beta subunit, putative [Plasmodium falciparum 3D7]
Length = 80
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 31 GMR---RRRVTGSSGNGSGSV---GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIG 84
GMR RRR + +S NG+ S G S ++++FY DD+PG K++P VL+ +L F+
Sbjct: 10 GMRTPARRRQSNASANGNNSKQRRNSNGNSNSIVKFYGDDSPGFKLTPQTVLISTLIFMA 69
Query: 85 FVTALHVFGKL 95
V LH+ K+
Sbjct: 70 SVVILHIISKI 80
>gi|268580279|ref|XP_002645122.1| Hypothetical protein CBG16816 [Caenorhabditis briggsae]
Length = 80
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 25 SAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIG 84
S TAG R+R G++ + + GG + + RFYT+D+ GLKI P VL+MSL FI
Sbjct: 7 SPRPTAGGVRQRKGGATAAPARARGGN--NGGLWRFYTEDSTGLKIGPVPVLVMSLVFIA 64
Query: 85 FVTALHVFGKLYRHKS 100
V LH++GK R ++
Sbjct: 65 SVFVLHIWGKFTRSRA 80
>gi|302672665|ref|XP_003026020.1| hypothetical protein SCHCODRAFT_114858 [Schizophyllum commune
H4-8]
gi|300099700|gb|EFI91117.1| hypothetical protein SCHCODRAFT_114858 [Schizophyllum commune
H4-8]
Length = 97
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 9 STSSATSRPGVVAPRGSAAATAGMRRR---RVTGSSGNGSGSVGGAGASTNMLRFYTDDA 65
S SS RP +P G A +RRR + S + G G+S+ ML+ YTDD+
Sbjct: 4 SDSSKAVRP--TSPSGVARPAGALRRRATPSSAAAKPASSRAAGAGGSSSTMLKLYTDDS 61
Query: 66 PGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
PG ++ P VV+++++ FI + LH+ KL +
Sbjct: 62 PGWRVEPHVVVVLAVSFIASIFFLHISAKLIK 93
>gi|196001977|ref|XP_002110856.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190586807|gb|EDV26860.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 95
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 30 AGMRRRRVTGSSGNGSGS-VGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTA 88
+G+R+R+ TG G+ VG AGA+T+ RF+T+D+PG K+ P VL+MS+ +I +
Sbjct: 27 SGVRQRKPTGGGAGGAAPRVGSAGAATSW-RFFTEDSPGFKVEPVPVLVMSIIYIVAIFL 85
Query: 89 LHVFGKLYR 97
LH++GK R
Sbjct: 86 LHLWGKYSR 94
>gi|384494861|gb|EIE85352.1| hypothetical protein RO3G_10062 [Rhizopus delemar RA 99-880]
Length = 49
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 52 GASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G+++NM+ Y+DDAPGL++ P VVL++SL FI V LH+ GK
Sbjct: 4 GSTSNMMSIYSDDAPGLRVDPVVVLVLSLTFIASVFGLHIVGKF 47
>gi|344230728|gb|EGV62613.1| hypothetical protein CANTEDRAFT_115149 [Candida tenuis ATCC
10573]
gi|344230729|gb|EGV62614.1| Pre protein translocase Sec Sec61-beta subunit [Candida tenuis
ATCC 10573]
Length = 93
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 20 VAPRG--SAAA--TAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVV 75
VAP G SAA T ++ + T ++ + S G G+S ML+ +TD+A GL++ P VV
Sbjct: 8 VAPGGLRSAAKRKTTAEKKAQATNANPVSTRSAGAGGSSATMLKLFTDEAQGLRVDPLVV 67
Query: 76 LLMSLCFIGFVTALHVFGKL 95
L +++ FI V LHVF K+
Sbjct: 68 LFLAVGFIFSVIILHVFAKI 87
>gi|308459846|ref|XP_003092235.1| hypothetical protein CRE_14332 [Caenorhabditis remanei]
gi|308253963|gb|EFO97915.1| hypothetical protein CRE_14332 [Caenorhabditis remanei]
Length = 80
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 52 GASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
G + + RFYT+D+ GLKI P VL+MSL FI V LH++GK R ++
Sbjct: 32 GNNGGLWRFYTEDSTGLKIGPVPVLVMSLVFIASVFVLHIWGKFTRTRA 80
>gi|320582733|gb|EFW96950.1| Beta subunit of the Sec61p ER translocation complex
(Sec61p-Sss1p-Sbh1p) [Ogataea parapolymorpha DL-1]
Length = 88
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 14 TSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPT 73
+S PG AT + ++ S + + G G+S+ ML+ YTD++ G KI P
Sbjct: 2 SSVPGGAKTLAKRKATQENKLKQQLQSQPTSTRAAGAGGSSSTMLKIYTDESQGFKIDPL 61
Query: 74 VVLLMSLCFIGFVTALHVFGKL 95
VVL++++ FI V LHV KL
Sbjct: 62 VVLVLAVSFIFSVVLLHVLAKL 83
>gi|156097823|ref|XP_001614944.1| protein transport protein sec61 beta 1 subunit [Plasmodium vivax
Sal-1]
gi|148803818|gb|EDL45217.1| protein transport protein sec61 beta 1 subunit, putative
[Plasmodium vivax]
Length = 79
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTN-MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
RRR+ T S+ + S G +TN +++FY DD+PG K++P VL+ +L F+ V LH+
Sbjct: 16 RRRQSTASASSNSKPRGSNSGNTNSIVKFYGDDSPGFKLTPQTVLISTLIFMATVVILHI 75
Query: 92 FGKL 95
K+
Sbjct: 76 ISKI 79
>gi|66358240|ref|XP_626298.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46228009|gb|EAK88929.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 66
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+R+RR SS S + N++ +Y DD PGLK+ P VL+M+L ++ V LH+
Sbjct: 1 IRQRRALASSVTSSRE----NLAQNLMSYYVDDTPGLKLGPMTVLVMTLAYMSIVIVLHI 56
Query: 92 FGK 94
GK
Sbjct: 57 LGK 59
>gi|254569754|ref|XP_002491987.1| Beta subunit of the Sec61p ER translocation complex
(Sec61p-Sss1p-Sbh1p) [Komagataella pastoris GS115]
gi|238031784|emb|CAY69707.1| Beta subunit of the Sec61p ER translocation complex
(Sec61p-Sss1p-Sbh1p) [Komagataella pastoris GS115]
gi|328351518|emb|CCA37917.1| Protein transport protein Sec61 subunit beta [Komagataella
pastoris CBS 7435]
Length = 86
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
S G G+S+ ML+ YTD+A GLK+ P +VL++++ FI V LHV KL
Sbjct: 32 SAGAGGSSSTMLKLYTDEAQGLKVDPLIVLVLAVGFIFSVIGLHVVAKL 80
>gi|426225480|ref|XP_004006894.1| PREDICTED: protein transport protein Sec61 subunit beta-like
[Ovis aries]
Length = 96
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 27 AATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFV 86
AA + +R+R+ + G AG + M RFY +D+PGLK P VL+MSL I V
Sbjct: 26 AAGSTVRQRKNASCAARSPGRTTSAG-TRGMWRFYAEDSPGLKAGPVPVLVMSLLLIASV 84
Query: 87 TALHVFGKLYRH 98
LH++GK Y H
Sbjct: 85 FMLHIWGK-YTH 95
>gi|17543194|ref|NP_500197.1| Protein Y38F2AR.9 [Caenorhabditis elegans]
gi|351059801|emb|CCD67384.1| Protein Y38F2AR.9 [Caenorhabditis elegans]
Length = 81
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
+ RFYT+D+ GLKI P VL+MSL FI V LH++GK R ++
Sbjct: 38 LWRFYTEDSTGLKIGPVPVLVMSLVFIASVFVLHIWGKFTRSRA 81
>gi|354545031|emb|CCE41756.1| hypothetical protein CPAR2_803070 [Candida parapsilosis]
Length = 86
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
S G G+S+ M++ +TD+A GL++ P VVL +++ FI V LHVF KL
Sbjct: 33 SAGAGGSSSTMMKLFTDEAQGLRVDPLVVLFLAVGFIFSVIILHVFAKL 81
>gi|322711891|gb|EFZ03464.1| hypothetical protein MAA_00538 [Metarhizium anisopliae ARSEF 23]
Length = 151
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 60 FYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKSA 101
YTD++PGLK+ P +VL++SL FI V ALHV K+ R S+
Sbjct: 110 LYTDESPGLKVDPVIVLVLSLVFIFSVVALHVIAKITRRFSS 151
>gi|448509384|ref|XP_003866132.1| hypothetical protein CORT_0A03030, partial [Candida orthopsilosis
Co 90-125]
gi|380350470|emb|CCG20692.1| hypothetical protein CORT_0A03030, partial [Candida orthopsilosis
Co 90-125]
Length = 90
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
S G G+S+ M++ +TD+A GL++ P VVL +++ FI V LHVF KL
Sbjct: 39 SAGAGGSSSTMMKLFTDEAQGLRVDPLVVLFLAVGFIFSVIILHVFAKL 87
>gi|307204515|gb|EFN83195.1| Protein transport protein Sec61 subunit beta [Harpegnathos
saltator]
Length = 42
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
M +FYTDD+PG+K+ P VL+MSL FI V LH++GK R+
Sbjct: 1 MWKFYTDDSPGIKVGPVPVLVMSLLFIASVFMLHIWGKYTRN 42
>gi|50406760|ref|XP_456660.1| DEHA2A07656p [Debaryomyces hansenii CBS767]
gi|49652324|emb|CAG84616.1| DEHA2A07656p [Debaryomyces hansenii CBS767]
Length = 92
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 11/82 (13%)
Query: 25 SAAATAGMR---RRRVTGSSGNGSG--------SVGGAGASTNMLRFYTDDAPGLKISPT 73
SA A G+R +RR+ S S G G+S M++ +TD+A GL++ P
Sbjct: 5 SAQAPGGLRSAAKRRIAADKKAQSSNAMPLSTRSAGAGGSSATMMKLFTDEAQGLRVDPL 64
Query: 74 VVLLMSLCFIGFVTALHVFGKL 95
VVL +++ FI V LHVF K+
Sbjct: 65 VVLFLAVGFIFSVIILHVFAKI 86
>gi|341892729|gb|EGT48664.1| hypothetical protein CAEBREN_14842 [Caenorhabditis brenneri]
Length = 81
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRHKS 100
+ RFYT+D+ GLKI P VL+MSL FI V LH++GK R ++
Sbjct: 38 LWRFYTEDSTGLKIGPVPVLVMSLVFIASVFVLHIWGKFTRSRA 81
>gi|320169847|gb|EFW46746.1| hypothetical protein CAOG_04704 [Capsaspora owczarzaki ATCC
30864]
Length = 91
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 6 SQSSTS--SATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTD 63
SQ ST+ S+TSRPG PR +AA+ +R+RR G+S + + G ST L F D
Sbjct: 4 SQVSTNVGSSTSRPGGSTPR--SAASGIVRQRRTGGASTSRAAPSTG---STGFLGFSMD 58
Query: 64 DAPGLKISPTVVLLMSLCFIGFVTALHVFGKLY 96
DAPG+K+ P L+ S FI V +H+ +++
Sbjct: 59 DAPGIKVGPVTALVSSAVFIAAVLLMHIGSRMF 91
>gi|344304228|gb|EGW34477.1| hypothetical protein SPAPADRAFT_59898 [Spathaspora passalidarum
NRRL Y-27907]
Length = 94
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
S G G+S+ M++ +TD+A GL++ P VVL +++ FI V LHVF K+
Sbjct: 39 SAGAGGSSSTMMKLFTDEAQGLRVDPLVVLFLAVGFIFSVIILHVFAKI 87
>gi|209878786|ref|XP_002140834.1| Sec61beta family protein [Cryptosporidium muris RN66]
gi|209556440|gb|EEA06485.1| Sec61beta family protein [Cryptosporidium muris RN66]
Length = 62
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
MR+RR S + + N++ +Y DD PG+K+ P VL+M+L ++ V LH+
Sbjct: 1 MRQRRAAAPSKDS--------IAQNLMMYYMDDTPGIKVGPMTVLVMTLVYMSIVVMLHI 52
Query: 92 FGKL 95
GK
Sbjct: 53 LGKF 56
>gi|68064975|ref|XP_674471.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493064|emb|CAI05444.1| hypothetical protein PB402899.00.0 [Plasmodium berghei]
Length = 66
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 32 MRRRRVTGSSGNGSGSVGG--AGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTAL 89
M RRR S G S + G +G S +L+ Y DD+PG K++P VL+ +L F+ V L
Sbjct: 1 MFRRRPNPSGGQASNTNQGRNSGTSNTILKIYGDDSPGFKLTPQTVLISTLIFMATVVIL 60
Query: 90 HVFGKL 95
H+ K+
Sbjct: 61 HIISKI 66
>gi|226487976|emb|CAX75653.1| protein translocation complex beta [Schistosoma japonicum]
gi|226487978|emb|CAX75654.1| protein translocation complex beta [Schistosoma japonicum]
Length = 88
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 31 GMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
G R+R+ +S V + FY++D+PG+K+ P VL+MSLCFI V LH
Sbjct: 22 GARQRKAPAASARRP--VAPTAQKNPVFLFYSEDSPGIKVGPVPVLVMSLCFIVSVFLLH 79
Query: 91 VFGKLYR 97
+GK R
Sbjct: 80 FWGKYTR 86
>gi|60691481|gb|AAX30569.1| SJCHGC05179 protein [Schistosoma japonicum]
gi|226471192|emb|CAX70677.1| protein translocation complex beta [Schistosoma japonicum]
gi|226471194|emb|CAX70678.1| protein translocation complex beta [Schistosoma japonicum]
gi|226471196|emb|CAX70679.1| protein translocation complex beta [Schistosoma japonicum]
gi|226487974|emb|CAX75652.1| protein translocation complex beta [Schistosoma japonicum]
Length = 88
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 31 GMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
G R+R+ +S V + FY++D+PG+K+ P VL+MSLCFI V LH
Sbjct: 22 GARQRKAPAASARRP--VAPTAQKNPVFLFYSEDSPGIKVGPVPVLVMSLCFIVSVFLLH 79
Query: 91 VFGKLYR 97
+GK R
Sbjct: 80 FWGKYTR 86
>gi|328867044|gb|EGG15427.1| protein transport protein SEC61 beta subunit [Dictyostelium
fasciculatum]
Length = 79
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 9/57 (15%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL------YRHK 99
GG G+ M+R Y++++ GLK+ P VL+MSL FIGFV LH++G L Y++K
Sbjct: 14 GGMGS---MVRHYSEESIGLKVGPQAVLIMSLVFIGFVILLHIWGYLSLRTYTYKYK 67
>gi|330804246|ref|XP_003290108.1| hypothetical protein DICPUDRAFT_36820 [Dictyostelium purpureum]
gi|325079773|gb|EGC33357.1| hypothetical protein DICPUDRAFT_36820 [Dictyostelium purpureum]
Length = 59
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 58 LRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
++ Y+ DA GLK+ PT VL MSL FI FV LH++GK R
Sbjct: 20 MKVYSKDAIGLKVGPTAVLFMSLIFIAFVIILHIWGKYTR 59
>gi|452820889|gb|EME27926.1| hypothetical protein Gasu_45880 [Galdieria sulphuraria]
Length = 80
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 59 RFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
R Y+D+APGLK+ PT V++ S FI FV LH++ K
Sbjct: 42 RLYSDEAPGLKVGPTSVMIFSFVFIAFVVVLHIWSKF 78
>gi|126140432|ref|XP_001386738.1| hypothetical protein PICST_64118 [Scheffersomyces stipitis CBS
6054]
gi|126094022|gb|ABN68709.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 89
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S+ M++ +TD+A GL++ P VVL++++ FI V LHVF K+
Sbjct: 38 GAGGSSSTMMKLFTDEAQGLRVDPLVVLVLAVGFIFSVIILHVFAKI 84
>gi|45185920|ref|NP_983636.1| ACR234Cp [Ashbya gossypii ATCC 10895]
gi|44981710|gb|AAS51460.1| ACR234Cp [Ashbya gossypii ATCC 10895]
gi|374106842|gb|AEY95751.1| FACR234Cp [Ashbya gossypii FDAG1]
Length = 90
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 3/70 (4%)
Query: 26 AAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGF 85
AA +A ++++ T +S + G G+S ++L+ YTD+A GL++ P VVL +++ FI
Sbjct: 19 AAQSAKEKQQKQTPTS---TRQAGFGGSSNSILKLYTDEANGLRVDPLVVLFLAVGFIFS 75
Query: 86 VTALHVFGKL 95
V ALHV K+
Sbjct: 76 VIALHVIAKV 85
>gi|410084166|ref|XP_003959660.1| hypothetical protein KAFR_0K01710 [Kazachstania africana CBS
2517]
gi|372466252|emb|CCF60525.1| hypothetical protein KAFR_0K01710 [Kazachstania africana CBS
2517]
Length = 88
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
+ + T + + + G G+S+++L+ YTD+A GL++ P VVL +++ FI V ALHV
Sbjct: 22 KEKQTKQTPTSTRAAGHGGSSSSILKIYTDEANGLRVDPLVVLFLAVGFIFSVVALHVIS 81
Query: 94 KL 95
K+
Sbjct: 82 KV 83
>gi|365987401|ref|XP_003670532.1| hypothetical protein NDAI_0E04720 [Naumovozyma dairenensis CBS
421]
gi|343769302|emb|CCD25289.1| hypothetical protein NDAI_0E04720 [Naumovozyma dairenensis CBS
421]
Length = 82
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+++R+ + + +S ML+ Y+D+A GLKI P VVL +++ FI V ALH+
Sbjct: 14 LQKRKQAPVAAKSKAESASSPSSNPMLKIYSDEATGLKIDPLVVLFLAVGFIFSVVALHI 73
Query: 92 FGKL 95
K+
Sbjct: 74 ISKI 77
>gi|403360861|gb|EJY80125.1| Protein transport protein Sec61 subunit beta, putative [Oxytricha
trifallax]
Length = 90
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G + N L F+++++ GLK+SP VL++SL ++G V LH+FGK+
Sbjct: 31 GRPQSKQNQLSFFSEESQGLKLSPKTVLVVSLLYMGVVVLLHIFGKV 77
>gi|302660791|ref|XP_003022071.1| hypothetical protein TRV_03812 [Trichophyton verrucosum HKI 0517]
gi|291185998|gb|EFE41453.1| hypothetical protein TRV_03812 [Trichophyton verrucosum HKI 0517]
Length = 278
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
G G+S ML+ YTD++PGLK+ P VVL++SL FI V LH
Sbjct: 67 GAGGSSGTMLKLYTDESPGLKVDPVVVLVLSLGFIFSVVGLH 108
>gi|67516271|ref|XP_658021.1| hypothetical protein AN0417.2 [Aspergillus nidulans FGSC A4]
gi|40747360|gb|EAA66516.1| hypothetical protein AN0417.2 [Aspergillus nidulans FGSC A4]
gi|259489339|tpe|CBF89527.1| TPA: translocon protein Sec61beta, putative (AFU_orthologue;
AFUA_1G04890) [Aspergillus nidulans FGSC A4]
Length = 250
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
G G+S+ ML+ YTD++PGL++ P VVL++SL FI V LH
Sbjct: 72 GAGGSSSTMLKLYTDESPGLRVDPVVVLVLSLGFIFSVVGLH 113
>gi|50309673|ref|XP_454848.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|42559827|sp|Q8J2P4.1|SC61B_KLULA RecName: Full=Protein transport protein Sec61 subunit beta
gi|23600292|gb|AAN39012.1| SEB1 [Kluyveromyces lactis]
gi|49643983|emb|CAG99935.1| KLLA0E19823p [Kluyveromyces lactis]
Length = 88
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 29 TAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTA 88
A +++ + + G G+S+++L+ YTD+A GL++ P VVL +++ F+ V A
Sbjct: 17 NAQLQKEKKANQTPASPRQAGFGGSSSSILKLYTDEANGLRVDPLVVLFLAVAFVFSVVA 76
Query: 89 LHVFGKL 95
LHV K+
Sbjct: 77 LHVVAKV 83
>gi|448114715|ref|XP_004202645.1| Piso0_001491 [Millerozyma farinosa CBS 7064]
gi|359383513|emb|CCE79429.1| Piso0_001491 [Millerozyma farinosa CBS 7064]
Length = 91
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 25 SAAATAGMR---RRRVTG---SSGNGSG-----SVGGAGASTNMLRFYTDDAPGLKISPT 73
S+AA G+R +R+ +SGN S S G G+S ML+ +TD+ GL + P
Sbjct: 3 SSAAPGGLRSVAKRKNAADKKASGNNSAPLSTRSAGAGGSSATMLKLFTDETQGLNLDPL 62
Query: 74 VVLLMSLCFIGFVTALHVFGKL 95
VVL +++ FI V LHVF K+
Sbjct: 63 VVLFLAVGFIFSVIILHVFAKV 84
>gi|145547212|ref|XP_001459288.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427112|emb|CAK91891.1| unnamed protein product [Paramecium tetraurelia]
Length = 83
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
++RR+ G S + S GG L FY+ D LK+ P VL++SL ++G V LH+
Sbjct: 12 LKRRQGGGKSPSKSSETGGQSG----LNFYSGDVSSLKVQPNTVLIISLVYLGIVVLLHI 67
Query: 92 FGKL 95
F KL
Sbjct: 68 FSKL 71
>gi|367011555|ref|XP_003680278.1| hypothetical protein TDEL_0C01780 [Torulaspora delbrueckii]
gi|359747937|emb|CCE91067.1| hypothetical protein TDEL_0C01780 [Torulaspora delbrueckii]
Length = 88
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S+++L+ YTD+A GL++ P VVL +++ FI V A+HV K+
Sbjct: 37 GHGGSSSSILKIYTDEANGLRVDPLVVLFLAVAFIFSVVAMHVISKV 83
>gi|145482483|ref|XP_001427264.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394344|emb|CAK59866.1| unnamed protein product [Paramecium tetraurelia]
Length = 83
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
++RR+ G S + S GG L FY+ D LK+ P VL++SL ++G V LH+
Sbjct: 12 LKRRQGGGKSPSKSSETGGQSG----LNFYSGDVSSLKVQPNTVLIISLVYLGIVVLLHI 67
Query: 92 FGKL 95
F KL
Sbjct: 68 FSKL 71
>gi|403214972|emb|CCK69472.1| hypothetical protein KNAG_0C03680 [Kazachstania naganishii CBS
8797]
Length = 88
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 27 AATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFV 86
A TA ++ + T +S + G G+S ++L+ YTD+A GL++ P VVL +++ FI V
Sbjct: 18 AQTAKDKQAKQTPTSAR---TAGHGGSSNSILKIYTDEANGLRVDPLVVLFLAVGFIFSV 74
Query: 87 TALHVFGKL 95
ALHV K+
Sbjct: 75 VALHVISKV 83
>gi|448112139|ref|XP_004202019.1| Piso0_001491 [Millerozyma farinosa CBS 7064]
gi|359465008|emb|CCE88713.1| Piso0_001491 [Millerozyma farinosa CBS 7064]
Length = 91
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 47 SVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
S G G+S ML+ +TD+ GL + P VVL +++ FI V LHVF K+
Sbjct: 36 SAGAGGSSATMLKLFTDETQGLNLDPLVVLFLAVGFIFSVIILHVFAKV 84
>gi|363752653|ref|XP_003646543.1| hypothetical protein Ecym_4706 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890178|gb|AET39726.1| hypothetical protein Ecym_4706 [Eremothecium cymbalariae
DBVPG#7215]
Length = 90
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 26 AAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGF 85
AA +A ++ + T +S + G G+S ++L+ YTD+A GL++ P V+L +++ FI
Sbjct: 19 AAQSAKEKQLKQTPAS---TRQAGFGGSSNSILKLYTDEANGLRVDPLVILFLAVGFIFS 75
Query: 86 VTALHVFGKL 95
V ALHV K+
Sbjct: 76 VIALHVVAKI 85
>gi|254578184|ref|XP_002495078.1| ZYRO0B02816p [Zygosaccharomyces rouxii]
gi|238937968|emb|CAR26145.1| ZYRO0B02816p [Zygosaccharomyces rouxii]
Length = 107
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S ++L+ YTD+A GL++ P VVL +++ FI V ALHV K+
Sbjct: 56 GHGGSSNSILKVYTDEANGLRVDPLVVLFLAVGFIFSVVALHVVAKV 102
>gi|255711436|ref|XP_002552001.1| KLTH0B04928p [Lachancea thermotolerans]
gi|238933379|emb|CAR21563.1| KLTH0B04928p [Lachancea thermotolerans CBS 6340]
Length = 89
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S ++L+ YTD+A GL++ P VVL +++ FI V ALHV K+
Sbjct: 38 GFGGSSNSVLKLYTDEANGLRVDPLVVLFLAVGFIFSVVALHVVAKV 84
>gi|401840972|gb|EJT43576.1| SBH2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 88
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S+++L+FYTD+A GL++ VVL +S+ FI V ALH+ K
Sbjct: 38 GFGGSSSSILKFYTDEASGLRVDSLVVLFLSVGFIFSVIALHLLAKF 84
>gi|145510588|ref|XP_001441227.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408466|emb|CAK73830.1| unnamed protein product [Paramecium tetraurelia]
Length = 83
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 28 ATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVT 87
A ++RR+ G S + + GG L FY+ D LK+ P VL++SL ++G V
Sbjct: 8 AKDAIKRRQGGGKSPSKATENGGQSG----LNFYSGDVSSLKVQPNTVLIISLVYLGIVV 63
Query: 88 ALHVFGKL 95
LH+F KL
Sbjct: 64 LLHIFSKL 71
>gi|358253533|dbj|GAA53359.1| protein transport protein SEC61 subunit beta, partial [Clonorchis
sinensis]
Length = 232
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 48 VGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
V + + FY++D+PG+K+ P VL+MSLCFI V LH +G
Sbjct: 120 VAPTAPNKPVFLFYSEDSPGIKVGPVPVLVMSLCFIVAVFLLHFWG 165
>gi|328851016|gb|EGG00175.1| hypothetical protein MELLADRAFT_39902 [Melampsora larici-populina
98AG31]
Length = 78
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 49 GGAGASTNMLRFYT-DDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S M+R YT DD GLK+ P VVL +S+ F+ V LH+ KL R
Sbjct: 25 GHGGSSNTMMRLYTQDDNVGLKVEPVVVLGLSVAFVASVVCLHLANKLMR 74
>gi|365981493|ref|XP_003667580.1| hypothetical protein NDAI_0A01790 [Naumovozyma dairenensis CBS
421]
gi|343766346|emb|CCD22337.1| hypothetical protein NDAI_0A01790 [Naumovozyma dairenensis CBS
421]
Length = 89
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S N+L+ +TD+A GL + P VV+ +++ FI V ALHV K+
Sbjct: 38 GYGGSSANILKIFTDEADGLSVDPLVVMFLAVAFIFSVIALHVVVKV 84
>gi|357490057|ref|XP_003615316.1| hypothetical protein MTR_5g066500 [Medicago truncatula]
gi|355516651|gb|AES98274.1| hypothetical protein MTR_5g066500 [Medicago truncatula]
Length = 115
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 34/61 (55%), Gaps = 10/61 (16%)
Query: 23 RGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCF 82
RGSA ATA +RR V G G VG ML FY D A G KISP VVL MS+ F
Sbjct: 57 RGSATATASIRRMNV----GAFEGVVG------TMLHFYVDGALGFKISPIVVLAMSIGF 106
Query: 83 I 83
I
Sbjct: 107 I 107
>gi|385302669|gb|EIF46792.1| beta subunit of the sec61p er translocation complex
(sec61p-sss1p-sbh1p) [Dekkera bruxellensis AWRI1499]
Length = 89
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 26/39 (66%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
ML+ YTD+A G KI P VVL+ ++ FI V LHV KL
Sbjct: 46 MLKIYTDEADGFKIDPLVVLIFAVAFIFSVVVLHVISKL 84
>gi|401626014|gb|EJS43982.1| sbh1p [Saccharomyces arboricola H-6]
gi|401842622|gb|EJT44756.1| SBH1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 82
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTN--MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
++R GSS + S ++N +L+ Y+D+A GL++ P VVL +++ FI V ALHV
Sbjct: 14 QKRKQGSSQKVAASAQKKNTNSNNSILKIYSDEATGLRVDPLVVLFLAVGFIFSVVALHV 73
Query: 92 FGKL 95
K+
Sbjct: 74 ISKV 77
>gi|398364575|ref|NP_011011.3| Sbh1p [Saccharomyces cerevisiae S288c]
gi|1710828|sp|P52870.1|SC6B1_YEAST RecName: Full=Protein transport protein SBH1; AltName: Full=Sec61
complex subunit SBH1; AltName: Full=Sec61 complex
subunit beta
gi|1297045|emb|CAA87710.1| Sec61 beta 1 [Saccharomyces cerevisiae]
gi|2196468|gb|AAB64663.1| Seb1p [Saccharomyces cerevisiae]
gi|151944804|gb|EDN63063.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405651|gb|EDV08918.1| protein transport protein SEC61 beta 1 subunit [Saccharomyces
cerevisiae RM11-1a]
gi|256271439|gb|EEU06493.1| Sbh1p [Saccharomyces cerevisiae JAY291]
gi|259146008|emb|CAY79268.1| Sbh1p [Saccharomyces cerevisiae EC1118]
gi|285811720|tpg|DAA07748.1| TPA: Sbh1p [Saccharomyces cerevisiae S288c]
gi|349577753|dbj|GAA22921.1| K7_Sbh1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299789|gb|EIW10881.1| Sbh1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 82
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 34 RRRVTGSSGNGSGSVGGAGASTN--MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
++R GSS + S ++N +L+ Y+D+A GL++ P VVL +++ FI V ALHV
Sbjct: 14 QKRKQGSSQKVAASAPKKNTNSNNSILKIYSDEATGLRVDPLVVLFLAVGFIFSVVALHV 73
Query: 92 FGKL 95
K+
Sbjct: 74 ISKV 77
>gi|167530590|ref|XP_001748156.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773276|gb|EDQ86917.1| predicted protein [Monosiga brevicollis MX1]
Length = 145
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 60 FYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
YT+D PGLK+ P VL+MSL I V LH++GK
Sbjct: 108 MYTEDTPGLKVGPVPVLVMSLVLIASVFLLHIWGKF 143
>gi|302309770|ref|XP_002999558.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049140|emb|CAR58031.1| unnamed protein product [Candida glabrata]
Length = 85
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 25 SAAATAGMRRRRVTGSSGNGSGSVGGAGASTN---MLRFYTDDAPGLKISPTVVLLMSLC 81
SA + ++R+ T S N G A N +L+ Y+D+A GL++ P VVL +++
Sbjct: 7 SAGSEKPIQRKGKTASEKNSREGTPGTPALKNSNSILKIYSDEAKGLRVDPLVVLFLAVG 66
Query: 82 FIGFVTALHVFGKL 95
FI V LHV K+
Sbjct: 67 FIFSVVGLHVISKI 80
>gi|134118792|ref|XP_771899.1| hypothetical protein CNBN0790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254503|gb|EAL17252.1| hypothetical protein CNBN0790 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 100
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 47 SVGGAGASTNMLRFYTDDAP-GLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD GLK+ P VV+++S+ FI + LH+ K+ R
Sbjct: 45 SAGAGGSSNTMLKLYTDSGEAGLKVDPFVVIVLSISFIASIFFLHITAKIIR 96
>gi|156841838|ref|XP_001644290.1| hypothetical protein Kpol_1030p42 [Vanderwaltozyma polyspora DSM
70294]
gi|156114929|gb|EDO16432.1| hypothetical protein Kpol_1030p42 [Vanderwaltozyma polyspora DSM
70294]
Length = 90
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 50 GAGASTN-MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G STN +L+ YTD+A GL++ P VVL +S+ FI V LHV K+
Sbjct: 39 GFGGSTNSILKIYTDEANGLRVDPLVVLFLSVGFIFSVVILHVAAKV 85
>gi|405123826|gb|AFR98589.1| hypothetical protein CNAG_06351 [Cryptococcus neoformans var.
grubii H99]
Length = 100
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 47 SVGGAGASTNMLRFYTDD-APGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD GLK+ P VV+++S+ FI + LH+ K+ R
Sbjct: 45 SAGAGGSSNTMLKLYTDSGEAGLKVDPFVVIVLSISFIASIFFLHITAKIIR 96
>gi|148688267|gb|EDL20214.1| mCG20327 [Mus musculus]
Length = 94
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 25 SAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIG 84
+A +T R+ G+ G + G G M RFYT+D+ GLK+ VL+MSL FI
Sbjct: 26 AAGSTVWQRKNASCGTRSAGRTTSAGTGG---MWRFYTEDSSGLKVGLVPVLVMSLLFIA 82
Query: 85 FVTALHVFGK 94
V L+++GK
Sbjct: 83 SVFMLNIWGK 92
>gi|366993881|ref|XP_003676705.1| hypothetical protein NCAS_0E02760 [Naumovozyma castellii CBS
4309]
gi|342302572|emb|CCC70346.1| hypothetical protein NCAS_0E02760 [Naumovozyma castellii CBS
4309]
Length = 80
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTN-MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
+++R+ + S N + + Y+D+A GLK+ P VVL +++ FI V ALH
Sbjct: 11 LQKRKPAAKKAESAQEKPATVNSNNPIFKIYSDEANGLKVDPLVVLFLAVGFIFSVVALH 70
Query: 91 VFGKL 95
V KL
Sbjct: 71 VISKL 75
>gi|392574605|gb|EIW67741.1| hypothetical protein TREMEDRAFT_57528 [Tremella mesenterica DSM
1558]
Length = 101
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 49 GGAGASTNMLRFYTD--DAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD DA GLK+ P VV+++SL FI + LH+ K+ R
Sbjct: 48 GAGGSSNTMLKLYTDSGDA-GLKVDPFVVIVLSLSFIASIFFLHIAAKVVR 97
>gi|156843674|ref|XP_001644903.1| hypothetical protein Kpol_530p15 [Vanderwaltozyma polyspora DSM
70294]
gi|156115556|gb|EDO17045.1| hypothetical protein Kpol_530p15 [Vanderwaltozyma polyspora DSM
70294]
Length = 79
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%)
Query: 32 MRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHV 91
+++RR S+ + + +++ + Y+++A GL++ P VVL +++ FI V ALHV
Sbjct: 11 LQKRRQAQSAKDKQSKATPSNEGSSIFKIYSEEANGLRVDPLVVLFLAVGFIFSVVALHV 70
Query: 92 FGKL 95
K+
Sbjct: 71 IAKV 74
>gi|58262424|ref|XP_568622.1| hypothetical protein CNN00800 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57230796|gb|AAW47105.1| hypothetical protein CNN00800 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 79
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 47 SVGGAGASTNMLRFYTDD-APGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
S G G+S ML+ YTD GLK+ P VV+++S+ FI + LH+ K+ R
Sbjct: 24 SAGAGGSSNTMLKLYTDSGEAGLKVDPFVVIVLSISFIASIFFLHITAKIIR 75
>gi|367018370|ref|XP_003658470.1| hypothetical protein MYCTH_2073127 [Myceliophthora thermophila ATCC
42464]
gi|347005737|gb|AEO53225.1| hypothetical protein MYCTH_2073127 [Myceliophthora thermophila ATCC
42464]
Length = 122
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ R+ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 54 QKERIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 113
Query: 93 GKLYR 97
K+ R
Sbjct: 114 AKITR 118
>gi|307105656|gb|EFN53904.1| expressed protein [Chlorella variabilis]
Length = 68
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 60 FYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
FYTD + LK+SP V++ ++ FI FV LH+FGKL
Sbjct: 31 FYTDASSVLKLSPQAVIVAAISFIVFVFVLHIFGKL 66
>gi|321265514|ref|XP_003197473.1| hypothetical protein CGB_N1200W [Cryptococcus gattii WM276]
gi|317463953|gb|ADV25686.1| Hypothetical protein CGB_N1200W [Cryptococcus gattii WM276]
Length = 100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 49 GGAGASTNMLRFYTDD-APGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S ML+ YTD GLK+ P VV+++S+ FI + LH+ K+ R
Sbjct: 47 GAGGSSNTMLKLYTDSGEAGLKVDPFVVIVLSISFIASIFFLHITAKVIR 96
>gi|19113224|ref|NP_596432.1| translocon beta subunit Sbh1 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|42559708|sp|O43002.1|SC61B_SCHPO RecName: Full=Protein transport protein sec61 subunit beta
gi|2956770|emb|CAA17883.1| translocon beta subunit Sbh1 (predicted) [Schizosaccharomyces
pombe]
Length = 102
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
+L+ YTD+A G K+ P VV+++S+ FI V LH+ ++ +
Sbjct: 57 LLKLYTDEASGFKVDPVVVMVLSVGFIASVFLLHIVARILKK 98
>gi|429860128|gb|ELA34876.1| translocon protein sec61beta [Colletotrichum gloeosporioides Nara
gc5]
Length = 113
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 45 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 104
Query: 93 GKLYR 97
K+ R
Sbjct: 105 AKITR 109
>gi|444314829|ref|XP_004178072.1| hypothetical protein TBLA_0A07640 [Tetrapisispora blattae CBS
6284]
gi|387511111|emb|CCH58553.1| hypothetical protein TBLA_0A07640 [Tetrapisispora blattae CBS
6284]
Length = 97
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
+L+ Y D+A GL++ P V+L +++ FI V ALHV K+
Sbjct: 46 ILKIYNDEANGLRVDPLVILFLAVGFIFSVIALHVISKM 84
>gi|328859977|gb|EGG09084.1| hypothetical protein MELLADRAFT_34638 [Melampsora larici-populina
98AG31]
Length = 60
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 49 GGAGASTNMLRFYT-DDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYR 97
G G+S M+R YT DD GLK P VVL +S+ F+ V LH+ GK R
Sbjct: 7 GHGGSSNTMMRLYTQDDNIGLKAEPVVVLGLSVAFVASVVCLHLAGKYMR 56
>gi|310789865|gb|EFQ25398.1| Sec61beta family protein [Glomerella graminicola M1.001]
Length = 114
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 46 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 105
Query: 93 GKLYR 97
K+ R
Sbjct: 106 AKITR 110
>gi|380482151|emb|CCF41421.1| hypothetical protein CH063_11692 [Colletotrichum higginsianum]
Length = 115
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 47 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 106
Query: 93 GKLYR 97
K+ R
Sbjct: 107 AKITR 111
>gi|116182394|ref|XP_001221046.1| predicted protein [Chaetomium globosum CBS 148.51]
gi|88186122|gb|EAQ93590.1| predicted protein [Chaetomium globosum CBS 148.51]
Length = 115
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ N + S G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 47 QKEKIANVRPNSTRSAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 106
Query: 93 GKLYR 97
K+ R
Sbjct: 107 AKITR 111
>gi|270346340|pdb|2WW9|C Chain C, Cryo-Em Structure Of The Active Yeast Ssh1 Complex Bound
To The Yeast 80s Ribosome
gi|270346355|pdb|2WWA|C Chain C, Cryo-Em Structure Of Idle Yeast Ssh1 Complex Bound To
The Yeast 80s Ribosome
Length = 87
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S+++L+ YTD+A G ++ VVL +S+ FI V ALH+ K
Sbjct: 38 GYGGSSSSILKLYTDEANGFRVDSLVVLFLSVGFIFSVIALHLLTKF 84
>gi|367052117|ref|XP_003656437.1| hypothetical protein THITE_2121054 [Thielavia terrestris NRRL 8126]
gi|347003702|gb|AEO70101.1| hypothetical protein THITE_2121054 [Thielavia terrestris NRRL 8126]
Length = 118
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 50 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 109
Query: 93 GKLYR 97
K+ R
Sbjct: 110 AKITR 114
>gi|6320857|ref|NP_010936.1| Sbh2p [Saccharomyces cerevisiae S288c]
gi|1710829|sp|P52871.1|SC6B2_YEAST RecName: Full=Protein transport protein SBH2; AltName: Full=Ssh1
complex subunit SBH2; AltName: Full=Ssh1 complex
subunit beta
gi|1297047|emb|CAA90305.1| Sec61 beta 2 [Saccharomyces cerevisiae]
gi|1877418|gb|AAB64567.1| Seb2p [Saccharomyces cerevisiae]
gi|46561773|gb|AAT01101.1| Sec61 beta-subunit homolog, second form [Saccharomyces
cerevisiae]
gi|51013849|gb|AAT93218.1| YER019C-A [Saccharomyces cerevisiae]
gi|151944729|gb|EDN62988.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405581|gb|EDV08848.1| protein transport protein SEC61 beta 2 subunit [Saccharomyces
cerevisiae RM11-1a]
gi|256273770|gb|EEU08695.1| Sbh2p [Saccharomyces cerevisiae JAY291]
gi|259145926|emb|CAY79186.1| Sbh2p [Saccharomyces cerevisiae EC1118]
gi|285811644|tpg|DAA07672.1| TPA: Sbh2p [Saccharomyces cerevisiae S288c]
gi|349577677|dbj|GAA22845.1| K7_Sbh2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299967|gb|EIW11059.1| Sbh2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 88
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S+++L+ YTD+A G ++ VVL +S+ FI V ALH+ K
Sbjct: 38 GYGGSSSSILKLYTDEANGFRVDSLVVLFLSVGFIFSVIALHLLTKF 84
>gi|336261246|ref|XP_003345414.1| hypothetical protein SMAC_04645 [Sordaria macrospora k-hell]
Length = 123
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 55 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 114
Query: 93 GKLYR 97
K+ R
Sbjct: 115 AKITR 119
>gi|350296275|gb|EGZ77252.1| Preprotein translocase Sec Sec61-beta subunit [Neurospora
tetrasperma FGSC 2509]
Length = 114
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 46 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 105
Query: 93 GKLYR 97
K+ R
Sbjct: 106 AKITR 110
>gi|171695332|ref|XP_001912590.1| hypothetical protein [Podospora anserina S mat+]
gi|170947908|emb|CAP60072.1| unnamed protein product [Podospora anserina S mat+]
Length = 114
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 46 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 105
Query: 93 GKLYR 97
K+ R
Sbjct: 106 AKITR 110
>gi|85117537|ref|XP_965282.1| hypothetical protein NCU08379 [Neurospora crassa OR74A]
gi|28927088|gb|EAA36046.1| predicted protein [Neurospora crassa OR74A]
Length = 114
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 46 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 105
Query: 93 GKLYRHKSA 101
K+ R S+
Sbjct: 106 AKITRKFSS 114
>gi|399219108|emb|CCF75995.1| unnamed protein product [Babesia microti strain RI]
Length = 97
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 4 GSSQSSTSSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTD 63
G + S+ S T PG + M +R S N GAG + R + D
Sbjct: 9 GCNISTWSKTTPGPGNIV----GGQRKVMNKRPTGASEANRQRQPIGAGG---LYRLFKD 61
Query: 64 DAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
+A GLK+ P +L+ +L +IG V LH+ ++
Sbjct: 62 EATGLKMGPQTILITALAYIGVVVVLHILSRI 93
>gi|50285041|ref|XP_444949.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524251|emb|CAG57842.1| unnamed protein product [Candida glabrata]
Length = 89
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S+++L+ +TD+A GL++ P VVL ++ FI V ++H K+
Sbjct: 38 GFGGSSSSILKIFTDEADGLRVDPLVVLFLAAGFIFTVMSMHFVAKM 84
>gi|346326742|gb|EGX96338.1| Preprotein translocase Sec, Sec61-beta subunit, eukarya [Cordyceps
militaris CM01]
Length = 104
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + + S G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 36 QKEKIANVRPSSTRSAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 95
Query: 93 GKLYR 97
KL R
Sbjct: 96 AKLTR 100
>gi|241958044|ref|XP_002421741.1| beta subunit of the Sec61p ER translocation complex, putative;
protein transport protein, putative [Candida
dubliniensis CD36]
gi|223645086|emb|CAX39681.1| beta subunit of the Sec61p ER translocation complex, putative
[Candida dubliniensis CD36]
gi|238879630|gb|EEQ43268.1| protein transport protein SEC61 beta subunit [Candida albicans
WO-1]
Length = 45
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
M++ +TD+A GL++ P VVL +++ FI V LHVF K+
Sbjct: 1 MMKLFTDEAQGLRVDPLVVLFLAVGFIFSVIILHVFAKI 39
>gi|444318333|ref|XP_004179824.1| hypothetical protein TBLA_0C05090 [Tetrapisispora blattae CBS
6284]
gi|387512865|emb|CCH60305.1| hypothetical protein TBLA_0C05090 [Tetrapisispora blattae CBS
6284]
Length = 91
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 30 AGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAP--GLKISPTVVLLMSLCFIGFVT 87
A R R T S G G+S +L+ TDD+ L++ P V+L MS+ FI V
Sbjct: 18 AQQARDRATKQRPTSSRQAGFGGSSAAVLKIATDDSSTSSLRVDPLVILFMSVGFIFSVI 77
Query: 88 ALHVFGKL 95
LHV K+
Sbjct: 78 VLHVLAKM 85
>gi|156054108|ref|XP_001592980.1| hypothetical protein SS1G_05902 [Sclerotinia sclerotiorum 1980]
gi|154703682|gb|EDO03421.1| hypothetical protein SS1G_05902 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 110
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 30 AGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTAL 89
A ++ +V + + + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V AL
Sbjct: 39 AADQKDKVANARPSSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVAL 98
Query: 90 HVFGKLYRH 98
H+ K+ R
Sbjct: 99 HIIAKVTRK 107
>gi|336464192|gb|EGO52432.1| hypothetical protein NEUTE1DRAFT_90703 [Neurospora tetrasperma FGSC
2508]
Length = 114
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + N + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 46 QKEKIANARPNSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 105
Query: 93 GKLYRHKSA 101
K+ R S+
Sbjct: 106 AKITRKFSS 114
>gi|154297275|ref|XP_001549065.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|347440894|emb|CCD33815.1| similar to translocon beta subunit Sbh1 [Botryotinia fuckeliana]
Length = 110
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 30 AGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTAL 89
A ++ +V + + + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V AL
Sbjct: 39 AADQKDKVANARPSSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVAL 98
Query: 90 HVFGKLYRH 98
H+ K+ R
Sbjct: 99 HIIAKVTRK 107
>gi|367002986|ref|XP_003686227.1| hypothetical protein TPHA_0F03120 [Tetrapisispora phaffii CBS
4417]
gi|357524527|emb|CCE63793.1| hypothetical protein TPHA_0F03120 [Tetrapisispora phaffii CBS
4417]
Length = 81
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
+L+ Y+D+A GL++ P V++ +++ FI V ALH+ K
Sbjct: 38 ILKIYSDEANGLRVDPLVIIFLAVGFIFSVVALHIIAKF 76
>gi|302416113|ref|XP_003005888.1| predicted protein [Verticillium albo-atrum VaMs.102]
gi|261355304|gb|EEY17732.1| predicted protein [Verticillium albo-atrum VaMs.102]
gi|346973934|gb|EGY17386.1| hypothetical protein VDAG_01068 [Verticillium dahliae VdLs.17]
Length = 112
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + + + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 44 QKEKIANARPSSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 103
Query: 93 GKLYRH 98
K+ R
Sbjct: 104 AKVTRK 109
>gi|320588471|gb|EFX00940.1| translocon protein [Grosmannia clavigera kw1407]
Length = 123
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+ K+ R
Sbjct: 71 GAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHIIAKITRR 120
>gi|340505614|gb|EGR31929.1| hypothetical protein IMG5_099570 [Ichthyophthirius multifiliis]
Length = 92
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 67 GLKISPTVVLLMSLCFIGFVTALHVFGKL 95
GLK+ P VL++SL F+G V LH+FGKL
Sbjct: 42 GLKVQPRSVLVISLVFMGIVILLHIFGKL 70
>gi|118380336|ref|XP_001023332.1| Sec61beta family protein [Tetrahymena thermophila]
gi|89305099|gb|EAS03087.1| Sec61beta family protein [Tetrahymena thermophila SB210]
Length = 82
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 59 RFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
++Y+ ++ G+K+ P VL++SL ++G V LH+FGKL
Sbjct: 33 KYYSGES-GIKVQPKSVLIISLVYMGIVLLLHIFGKL 68
>gi|402079177|gb|EJT74442.1| hypothetical protein GGTG_08282 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 113
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 9 STSSATSRPGVVAPRG-----SAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTD 63
S+ ++T+RP P G A ++ ++ + + + + G G+++ MLR YTD
Sbjct: 16 SSGASTARPSSPTPPGGARTAIRRRAAADQKEKIANARPSSTRAAGAGGSTSTMLRLYTD 75
Query: 64 DAPGLKISPTVVLLMSLCFIGFVTALHVFGKLYRH 98
++PGLK+ P VVL++SL FI V ALH+ K+ R
Sbjct: 76 ESPGLKVDPVVVLVLSLVFIFSVVALHIIAKITRK 110
>gi|46109292|ref|XP_381704.1| hypothetical protein FG01528.1 [Gibberella zeae PH-1]
gi|342878837|gb|EGU80126.1| hypothetical protein FOXB_09401 [Fusarium oxysporum Fo5176]
gi|408399970|gb|EKJ79059.1| hypothetical protein FPSE_00807 [Fusarium pseudograminearum CS3096]
Length = 113
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + + + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 45 QKEKIANARPSSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 104
Query: 93 GKLYRH 98
K+ R
Sbjct: 105 AKITRK 110
>gi|400601959|gb|EJP69584.1| NLI interacting factor-like phosphatase [Beauveria bassiana ARSEF
2860]
Length = 550
Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + + + S G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 482 QKEKIANARPSSTRSAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 541
Query: 93 GKLYRHKSA 101
K+ R S+
Sbjct: 542 AKITRKFSS 550
>gi|340518162|gb|EGR48404.1| sec61 beta subunit of ER translocase [Trichoderma reesei QM6a]
gi|358381685|gb|EHK19360.1| hypothetical protein TRIVIDRAFT_216577 [Trichoderma virens Gv29-8]
gi|358390598|gb|EHK40003.1| hypothetical protein TRIATDRAFT_159353, partial [Trichoderma
atroviride IMI 206040]
Length = 112
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVF 92
++ ++ + + + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH+
Sbjct: 44 QKEKLANARPSSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALHII 103
Query: 93 GKLYR 97
K+ R
Sbjct: 104 AKISR 108
>gi|340924162|gb|EGS19065.1| hypothetical protein CTHT_0056870 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 148
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTV 74
++ R+ N + + G G+S ML+ YTD++PGLK+ P V
Sbjct: 56 QKERLANQRPNSTRAAGAGGSSNTMLKLYTDESPGLKVDPVV 97
>gi|401626072|gb|EJS44037.1| sbh2p [Saccharomyces arboricola H-6]
Length = 88
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 49 GGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFGKL 95
G G+S+++L+ YTD+A G ++ VVL +S+ FI V LH+ K
Sbjct: 38 GHGGSSSSILKLYTDEANGYRVDSLVVLFLSVGFIFSVFGLHLLTKF 84
>gi|406865520|gb|EKD18562.1| hypothetical protein MBM_03555 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 250
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%)
Query: 30 AGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTAL 89
A ++ +V + + + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V AL
Sbjct: 179 AADQKDKVANARPSSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVAL 238
Query: 90 HVFGKLYR 97
H+ K+ R
Sbjct: 239 HIIAKVTR 246
>gi|147798029|emb|CAN71777.1| hypothetical protein VITISV_019813 [Vitis vinifera]
Length = 286
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 5/33 (15%)
Query: 40 SSGNGSGSVGGAGASTNMLRFYTDDAPGLKISP 72
+SG G+GS G N+LR YTDDAPGLKI+P
Sbjct: 107 TSGAGNGSSGN-----NLLRVYTDDAPGLKITP 134
>gi|170585059|ref|XP_001897305.1| Protein transport protein SEC61 beta subunit [Brugia malayi]
gi|158595284|gb|EDP33850.1| Protein transport protein SEC61 beta subunit, putative [Brugia
malayi]
Length = 121
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 11 SSATSRPGVVAPRGSAAATAGMRRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKI 70
S A PG A GS AT +R+RR S+G+G + G +S + RFYT+DA GLKI
Sbjct: 2 SDAGRSPGRAARAGSGGAT--LRQRRGGPSAGSGRSARSGV-SSGGLWRFYTEDATGLKI 58
Query: 71 SPTVVLLMSLCFIGFVTAL----HVFGKLYRHKSAN 102
P V + FI TA+ +FG H + N
Sbjct: 59 GP--VPMPYNVFITANTAIVDRDDLFGCEKLHINDN 92
>gi|315231768|ref|YP_004072204.1| preprotein translocase [Thermococcus barophilus MP]
gi|315184796|gb|ADT84981.1| preprotein translocase [Thermococcus barophilus MP]
Length = 56
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
++RF+ +D +KISP + + L FI LHVFG
Sbjct: 15 LMRFFDEDTKAIKISPRGAIALVLIFIAIEILLHVFG 51
>gi|223478935|ref|YP_002583075.1| Preprotein translocase secG subunit [Thermococcus sp. AM4]
gi|214034161|gb|EEB74987.1| Preprotein translocase secG subunit [Thermococcus sp. AM4]
Length = 56
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
++RF+ +D +K+SP V+ ++L I F LH+FG
Sbjct: 15 LMRFFDEDTRAIKVSPKGVIAIALVLIAFEVFLHLFG 51
>gi|57641887|ref|YP_184365.1| preprotein translocase subunit SecG [Thermococcus kodakarensis
KOD1]
gi|73919300|sp|Q5JDK7.1|SECG_PYRKO RecName: Full=Preprotein translocase subunit SecG; AltName:
Full=Protein transport protein Sec61 subunit beta
homolog
gi|57160211|dbj|BAD86141.1| preprotein translocase, SEC61 beta subunit [Thermococcus
kodakarensis KOD1]
Length = 56
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
++RF+ +D +K+SP V+ ++L I F LH+FG
Sbjct: 15 LMRFFDEDTRAVKVSPKGVIALTLLLIAFEFILHMFG 51
>gi|409095704|ref|ZP_11215728.1| preprotein translocase subunit SecG [Thermococcus zilligii AN1]
Length = 56
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
++RF+ +D +K+SP V+ ++L + F LH+FG
Sbjct: 15 LMRFFDEDTRAIKVSPKGVIALTLILVAFEIFLHLFG 51
>gi|389637213|ref|XP_003716245.1| hypothetical protein MGG_03644 [Magnaporthe oryzae 70-15]
gi|351642064|gb|EHA49926.1| hypothetical protein MGG_03644 [Magnaporthe oryzae 70-15]
gi|440475337|gb|ELQ44020.1| hypothetical protein OOU_Y34scaffold00108g13 [Magnaporthe oryzae
Y34]
gi|440486203|gb|ELQ66093.1| hypothetical protein OOW_P131scaffold00429g12 [Magnaporthe oryzae
P131]
Length = 144
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 33 RRRRVTGSSGNGSGSVGGAGASTNMLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALH 90
++ ++ + + + + G G+S+ MLR YTD++PGLK+ P VVL++SL FI V ALH
Sbjct: 45 QKEKIANARPSSTRAAGAGGSSSTMLRLYTDESPGLKVDPVVVLVLSLVFIFSVVALH 102
>gi|240102696|ref|YP_002959005.1| preprotein translocase subunit SecG [Thermococcus gammatolerans
EJ3]
gi|259509815|sp|C5A4H9.1|SECG_THEGJ RecName: Full=Preprotein translocase subunit SecG; AltName:
Full=Protein transport protein Sec61 subunit beta
homolog
gi|239910250|gb|ACS33141.1| Preprotein translocase SEC61 complex beta subunit (secG)
[Thermococcus gammatolerans EJ3]
Length = 56
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 57 MLRFYTDDAPGLKISPTVVLLMSLCFIGFVTALHVFG 93
++RF+ +D +K+SP V+ + L I F LH+FG
Sbjct: 15 LMRFFDEDTRAIKVSPKGVIAIVLVLIAFEVFLHLFG 51
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.128 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,492,247,481
Number of Sequences: 23463169
Number of extensions: 57329908
Number of successful extensions: 517662
Number of sequences better than 100.0: 695
Number of HSP's better than 100.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 515005
Number of HSP's gapped (non-prelim): 2485
length of query: 102
length of database: 8,064,228,071
effective HSP length: 71
effective length of query: 31
effective length of database: 6,398,343,072
effective search space: 198348635232
effective search space used: 198348635232
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)