Query 034154
Match_columns 102
No_of_seqs 13 out of 15
Neff 2.1
Searched_HMMs 29240
Date Mon Mar 25 17:40:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034154.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034154hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x2s_A Agglutinin, agglutinin 62.0 6.6 0.00023 29.2 3.3 27 75-101 86-113 (153)
2 2e7b_A Obscurin; IG-like domai 37.2 52 0.0018 18.6 3.8 21 65-87 23-43 (103)
3 3h6q_A Macrocypin 1A; mycocypi 22.9 57 0.0019 24.5 2.8 45 45-93 56-116 (169)
4 2dlt_A Myosin binding protein 21.8 81 0.0028 18.0 2.8 20 65-86 23-42 (106)
5 3ku7_A MINE, cell division top 18.5 29 0.00099 22.6 0.3 9 1-9 4-12 (80)
6 1spp_A Major seminal plasma gl 15.7 87 0.003 19.3 2.1 12 80-91 24-35 (109)
7 1spp_B Major seminal plasma gl 14.9 96 0.0033 19.2 2.1 12 80-91 27-38 (116)
8 3qis_A Inositol polyphosphate 13.9 2E+02 0.0069 21.9 4.1 36 53-93 34-72 (366)
9 1nzi_A Complement C1S componen 13.9 82 0.0028 20.1 1.6 11 81-91 21-31 (159)
10 1waa_A Titin; metal binding pr 12.9 1.8E+02 0.006 16.9 2.8 20 65-86 20-39 (93)
No 1
>2x2s_A Agglutinin, agglutinin SSA; fungal lectin, beta-trefoil domain, cell adhesion; 1.60A {Sclerotinia sclerotiorum} PDB: 2x2t_A*
Probab=61.97 E-value=6.6 Score=29.18 Aligned_cols=27 Identities=30% Similarity=0.613 Sum_probs=18.8
Q ss_pred cCCCCCcce-eeEEeeCCCCCCCceeEe
Q 034154 75 PVSDDLEPC-RWEILPASDSDAPQFRVV 101 (102)
Q Consensus 75 pVsddlepC-rWei~pa~~~~aPQfrvv 101 (102)
++.+++.+| ||+|.|+.-.+-=-|||.
T Consensus 86 ~q~sp~~~~~rWrI~~~G~~~~G~f~I~ 113 (153)
T 2x2s_A 86 PQISPTDPSARWTIKPATTHQYEVFTIN 113 (153)
T ss_dssp CCCCTTCGGGCEEEEESCC--CCCEEEE
T ss_pred EEEcCCCccceEEEEeccccCcceEEEe
Confidence 566777788 999999885555567773
No 2
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=37.16 E-value=52 Score=18.62 Aligned_cols=21 Identities=24% Similarity=0.570 Sum_probs=15.5
Q ss_pred CCceEEEeeecCCCCCcceeeEE
Q 034154 65 ADKVTMAGYCPVSDDLEPCRWEI 87 (102)
Q Consensus 65 ~d~VTlaGyCpVsddlepCrWei 87 (102)
++.|+|. |.++..-.|-.|.-
T Consensus 23 G~~v~l~--C~~~~~p~~v~W~k 43 (103)
T 2e7b_A 23 GGAATLR--CVLSSVAAPVKWCY 43 (103)
T ss_dssp SSCEEEE--EECSSCCCSCEEEE
T ss_pred CCcEEEE--EEEeCCCCCeEEEE
Confidence 5567774 88887777788854
No 3
>3h6q_A Macrocypin 1A; mycocypin, cysteine protease inhibitor, kunitz type inhibitor, beta trefoil; 1.64A {Macrolepiota procera}
Probab=22.88 E-value=57 Score=24.55 Aligned_cols=45 Identities=29% Similarity=0.485 Sum_probs=27.0
Q ss_pred EeeCCCCC-ceEEEe--cc-----ceecCCceEEEeeecCCC-----CCc---ceeeEEeeCCCC
Q 034154 45 EVPRPAES-VTVFEF--GS-----VAASADKVTMAGYCPVSD-----DLE---PCRWEILPASDS 93 (102)
Q Consensus 45 eVpRp~~~-~tVFEF--GS-----aa~s~d~VTlaGyCpVsd-----dle---pCrWei~pa~~~ 93 (102)
++++..++ -||.|| |+ =+-+...+ --||.- --| .|-|+|+|++..
T Consensus 56 ~~ve~k~d~YTIt~~~~d~s~~G~Ws~~d~e~----~~PV~t~~~~~aEe~~~~~eW~I~p~dn~ 116 (169)
T 3h6q_A 56 RDPQAGDDMYTITEFRIDNSIPGQWSRSPVET----EVPVYLYDRIKAEETGYTCAWRIQPADHG 116 (169)
T ss_dssp ECGGGCTTCEEEEECCSSSSCCCEEEBCSSCS----SCBCEEECHHHHHHHTCBCCBEEEECTTC
T ss_pred EcccCCCceEEEEEecCCcccccccccCCCcc----CCCEEeccccccccccceEEEEEEeccCC
Confidence 56666665 889999 32 22222222 234442 234 899999999864
No 4
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.78 E-value=81 Score=18.04 Aligned_cols=20 Identities=30% Similarity=0.642 Sum_probs=13.6
Q ss_pred CCceEEEeeecCCCCCcceeeE
Q 034154 65 ADKVTMAGYCPVSDDLEPCRWE 86 (102)
Q Consensus 65 ~d~VTlaGyCpVsddlepCrWe 86 (102)
++.|+| .|.++.+-.|..|.
T Consensus 23 G~~v~l--~C~~~~~~~~v~W~ 42 (106)
T 2dlt_A 23 AEQAVF--KCEVSDEKVTGKWY 42 (106)
T ss_dssp SCCEEC--CCEESCSSCEEEEE
T ss_pred CCeEEE--EEEEcCCCcceEEE
Confidence 455666 58887666678884
No 5
>3ku7_A MINE, cell division topological specificity factor; cell cycle; 2.80A {Helicobacter pylori} PDB: 3mcd_A
Probab=18.46 E-value=29 Score=22.63 Aligned_cols=9 Identities=33% Similarity=0.770 Sum_probs=0.0
Q ss_pred CcccccccC
Q 034154 1 MGLLSWFMG 9 (102)
Q Consensus 1 MGLlsW~~~ 9 (102)
|+||.||++
T Consensus 4 M~l~~~f~k 12 (80)
T 3ku7_A 4 MSLFDFFKN 12 (80)
T ss_dssp ---------
T ss_pred ccHhHhcCC
Confidence 899999944
No 6
>1spp_A Major seminal plasma glycoprotein PSP-I; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=15.72 E-value=87 Score=19.26 Aligned_cols=12 Identities=17% Similarity=0.567 Sum_probs=8.6
Q ss_pred CcceeeEEeeCC
Q 034154 80 LEPCRWEILPAS 91 (102)
Q Consensus 80 lepCrWei~pa~ 91 (102)
-.-|.|.|.-..
T Consensus 24 ~~~C~w~I~~~~ 35 (109)
T 1spp_A 24 KTECVWTLQVDP 35 (109)
T ss_dssp CSEEEEEEECCT
T ss_pred CCcEEEEEEcCC
Confidence 345999998543
No 7
>1spp_B Major seminal plasma glycoprotein PSP-II; seminal plasma proteins, spermadhesins, CUB domain architecture, complex (seminal plasma protein/SPP); 2.40A {Sus scrofa} SCOP: b.23.1.1
Probab=14.92 E-value=96 Score=19.20 Aligned_cols=12 Identities=33% Similarity=0.764 Sum_probs=8.6
Q ss_pred CcceeeEEeeCC
Q 034154 80 LEPCRWEILPAS 91 (102)
Q Consensus 80 lepCrWei~pa~ 91 (102)
-.-|.|.|.-..
T Consensus 27 ~~~C~w~I~~~~ 38 (116)
T 1spp_B 27 KNLCTWTILMKP 38 (116)
T ss_dssp CSEEEEEEECCT
T ss_pred CCCEEEEEEeCC
Confidence 345999998543
No 8
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=13.93 E-value=2e+02 Score=21.93 Aligned_cols=36 Identities=22% Similarity=0.496 Sum_probs=25.3
Q ss_pred ceEEEecccee---cCCceEEEeeecCCCCCcceeeEEeeCCCC
Q 034154 53 VTVFEFGSVAA---SADKVTMAGYCPVSDDLEPCRWEILPASDS 93 (102)
Q Consensus 53 ~tVFEFGSaa~---s~d~VTlaGyCpVsddlepCrWei~pa~~~ 93 (102)
.+.+.||-+.- ....+||+--+.| ||+|++.+..++
T Consensus 34 ~~~idFg~v~~~~~~~~~l~i~N~g~~-----pa~f~f~~~~~~ 72 (366)
T 3qis_A 34 RREFVFENVKFRQLQKEKFQISNNGQV-----PCHFSFIPKLND 72 (366)
T ss_dssp CSEEEEEEECBTCCEEEEEEEEECSSS-----CEEEEEECCTTC
T ss_pred cCeEEeeeeeeCCeEEEEEEEEecCCc-----eEEEEEEeCCCC
Confidence 56789997642 2346778776665 899999986544
No 9
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=13.88 E-value=82 Score=20.11 Aligned_cols=11 Identities=18% Similarity=0.347 Sum_probs=8.0
Q ss_pred cceeeEEeeCC
Q 034154 81 EPCRWEILPAS 91 (102)
Q Consensus 81 epCrWei~pa~ 91 (102)
.-|+|.|.-..
T Consensus 21 ~~C~w~I~~~~ 31 (159)
T 1nzi_A 21 VEKSWDIEVPE 31 (159)
T ss_dssp EEEEEEEECCT
T ss_pred CCEEEEEEeCC
Confidence 45999998543
No 10
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=12.91 E-value=1.8e+02 Score=16.89 Aligned_cols=20 Identities=10% Similarity=0.240 Sum_probs=13.5
Q ss_pred CCceEEEeeecCCCCCcceeeE
Q 034154 65 ADKVTMAGYCPVSDDLEPCRWE 86 (102)
Q Consensus 65 ~d~VTlaGyCpVsddlepCrWe 86 (102)
++.|+| .|.|+.+--..+|.
T Consensus 20 G~~v~l--~C~v~~~~~~v~W~ 39 (93)
T 1waa_A 20 GETAHF--EIELSEPDVHGQWK 39 (93)
T ss_dssp TSCEEE--EEEESSSSCCCEEE
T ss_pred CCCEEE--EEEECCCCCeEEEE
Confidence 566777 58887554457885
Done!