Query 034154
Match_columns 102
No_of_seqs 13 out of 15
Neff 2.1
Searched_HMMs 13730
Date Mon Mar 25 17:40:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034154.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/034154hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ml8a_ d.227.1.2 (A:) Hypothe 55.8 0.61 4.4E-05 28.8 -1.3 20 71-90 110-134 (134)
2 d1ccza1 b.1.1.1 (A:1-93) CD2-b 37.4 14 0.001 20.0 2.9 24 62-87 7-30 (93)
3 d1tiua_ b.1.1.4 (A:) Twitchin 30.5 14 0.001 20.5 2.1 34 44-86 2-35 (89)
4 d1jbja2 b.1.1.4 (A:1-100) CD3 26.5 22 0.0016 23.1 2.7 24 60-86 9-32 (100)
5 d1lk2b_ b.1.1.2 (B:) beta2-mic 25.2 15 0.0011 21.4 1.5 28 46-77 1-28 (99)
6 d2ihoa1 b.42.2.1 (A:2-155) Agg 24.2 66 0.0048 18.8 4.7 35 65-101 78-113 (154)
7 d2qqma3 b.23.1.1 (A:156-263) M 21.2 18 0.0013 19.9 1.3 10 81-90 16-25 (108)
8 d1xiwa_ b.1.1.4 (A:) CD3 epsil 20.5 36 0.0026 21.6 2.8 23 61-86 6-28 (91)
9 d2pn2a1 d.227.1.1 (A:1-132) Un 18.3 16 0.0011 21.8 0.6 13 70-82 111-123 (132)
10 d1nt0a2 b.23.1.1 (A:165-278) M 17.8 34 0.0025 19.4 2.1 11 81-91 26-36 (114)
No 1
>d1ml8a_ d.227.1.2 (A:) Hypothetical protein in CRP region {Escherichia coli [TaxId: 562]}
Probab=55.83 E-value=0.61 Score=28.78 Aligned_cols=20 Identities=35% Similarity=0.615 Sum_probs=15.3
Q ss_pred EeeecCCCCCcc-----eeeEEeeC
Q 034154 71 AGYCPVSDDLEP-----CRWEILPA 90 (102)
Q Consensus 71 aGyCpVsddlep-----CrWei~pa 90 (102)
.-||||++-|.. ..|||+++
T Consensus 110 ek~CpV~~tL~~~v~i~~~~eii~~ 134 (134)
T d1ml8a_ 110 EKYCSVALMLEKAVNITHSYEVVAA 134 (134)
T ss_dssp HTTCHHHHHHTTTSEEEEEEEEEEC
T ss_pred ccCCchHHhcCCCCeEEEEEEEEeC
Confidence 369999976664 57899875
No 2
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.36 E-value=14 Score=20.02 Aligned_cols=24 Identities=21% Similarity=0.325 Sum_probs=19.3
Q ss_pred eecCCceEEEeeecCCCCCcceeeEE
Q 034154 62 AASADKVTMAGYCPVSDDLEPCRWEI 87 (102)
Q Consensus 62 a~s~d~VTlaGyCpVsddlepCrWei 87 (102)
++-|+.||| .|+++....-=.|.-
T Consensus 7 ~~~G~sVtl--~c~~~~p~~~v~W~~ 30 (93)
T d1ccza1 7 GVVYGNVTF--HVPSNVPLKEVLWKK 30 (93)
T ss_dssp EETTCCEEE--CCCCSSCCSCEEEEE
T ss_pred EEECCCEEE--EecCCCCCcEEEEEE
Confidence 456889999 899998777777864
No 3
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27 [TaxId: 9606]}
Probab=30.53 E-value=14 Score=20.53 Aligned_cols=34 Identities=26% Similarity=0.453 Sum_probs=22.8
Q ss_pred EEeeCCCCCceEEEeccceecCCceEEEeeecCCCCCcceeeE
Q 034154 44 IEVPRPAESVTVFEFGSVAASADKVTMAGYCPVSDDLEPCRWE 86 (102)
Q Consensus 44 veVpRp~~~~tVFEFGSaa~s~d~VTlaGyCpVsddlepCrWe 86 (102)
|+|-||.++.+|.| |+.++|. |.+++.--..+|-
T Consensus 2 i~i~~~l~d~~v~~-------G~~~~~~--c~vs~p~~~v~W~ 35 (89)
T d1tiua_ 2 IEVEKPLYGVEVFV-------GETAHFE--IELSEPDVHGQWK 35 (89)
T ss_dssp CCCSBCCCCEEEET-------TSCCCEE--EBCSSSSCCCBCC
T ss_pred EEEEcCCcCEEEeC-------CCcEEEE--EEECCCCcEEEEE
Confidence 46777877788876 3344453 8888766667884
No 4
>d1jbja2 b.1.1.4 (A:1-100) CD3 epsilon chain ectodomain fragment {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.48 E-value=22 Score=23.10 Aligned_cols=24 Identities=33% Similarity=0.792 Sum_probs=18.1
Q ss_pred cceecCCceEEEeeecCCCCCcceeeE
Q 034154 60 SVAASADKVTMAGYCPVSDDLEPCRWE 86 (102)
Q Consensus 60 Saa~s~d~VTlaGyCpVsddlepCrWe 86 (102)
.|+-||..|+|+ ||+..+.+ =.|+
T Consensus 9 kVSISGTtV~LT--CP~~~~~~-I~Wk 32 (100)
T d1jbja2 9 KVSISGTSVELT--CPLDSDEN-LKWE 32 (100)
T ss_dssp EEEEETTEEEEE--CSSCCCTT-CEEE
T ss_pred EEEEeCCEEEEE--CCCCCCCc-eEEe
Confidence 367789999997 99985543 6785
No 5
>d1lk2b_ b.1.1.2 (B:) beta2-microglobulin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.24 E-value=15 Score=21.38 Aligned_cols=28 Identities=11% Similarity=0.345 Sum_probs=15.6
Q ss_pred eeCCCCCceEEEeccceecCCceEEEeeecCC
Q 034154 46 VPRPAESVTVFEFGSVAASADKVTMAGYCPVS 77 (102)
Q Consensus 46 VpRp~~~~tVFEFGSaa~s~d~VTlaGyCpVs 77 (102)
|.|++. ++||=- +....++.+||. |-|+
T Consensus 1 v~~~P~-V~v~~~-~~~~~~~~~tL~--C~v~ 28 (99)
T d1lk2b_ 1 IQKTPQ-IQVYSR-HPPENGKPNILN--CYVT 28 (99)
T ss_dssp CCBCCE-EEEEES-SCCCTTSCEEEE--EEEE
T ss_pred CCCCCE-EEEEcC-CCccCCCcEEEE--EEEE
Confidence 456665 777622 334456677774 5444
No 6
>d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]}
Probab=24.18 E-value=66 Score=18.85 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=22.2
Q ss_pred CCceEEEeeecCCCCCcce-eeEEeeCCCCCCCceeEe
Q 034154 65 ADKVTMAGYCPVSDDLEPC-RWEILPASDSDAPQFRVV 101 (102)
Q Consensus 65 ~d~VTlaGyCpVsddlepC-rWei~pa~~~~aPQfrvv 101 (102)
.++..|.-|+.-+..-.++ +|.|.|.++ ...|+|.
T Consensus 78 ~~g~~v~~~~~~~~~~~~~Q~W~~~~~~~--g~~y~i~ 113 (154)
T d2ihoa1 78 EAGTAVNGWQGTAFTTNPHQLWTIKKSSD--GTSYKIQ 113 (154)
T ss_dssp STTEEEEEECCCTTCCCGGGCEEEEECTT--SSSEEEE
T ss_pred CCCcEEEEEeecccCCCcccEEEEccCCC--cceEEEE
Confidence 4556666676655555555 899999863 2356663
No 7
>d2qqma3 b.23.1.1 (A:156-263) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.21 E-value=18 Score=19.92 Aligned_cols=10 Identities=10% Similarity=0.504 Sum_probs=7.6
Q ss_pred cceeeEEeeC
Q 034154 81 EPCRWEILPA 90 (102)
Q Consensus 81 epCrWei~pa 90 (102)
.-|.|.|.-.
T Consensus 16 ~~C~w~I~~p 25 (108)
T d2qqma3 16 LECTYIVFAP 25 (108)
T ss_dssp CEEEEEEECG
T ss_pred CeEEEEEEeC
Confidence 4599999844
No 8
>d1xiwa_ b.1.1.4 (A:) CD3 epsilon chain ectodomain fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.54 E-value=36 Score=21.64 Aligned_cols=23 Identities=30% Similarity=0.608 Sum_probs=17.5
Q ss_pred ceecCCceEEEeeecCCCCCcceeeE
Q 034154 61 VAASADKVTMAGYCPVSDDLEPCRWE 86 (102)
Q Consensus 61 aa~s~d~VTlaGyCpVsddlepCrWe 86 (102)
|+-||..|+|+ ||-++..+ =.|+
T Consensus 6 VsISGTtV~LT--CP~~~~~~-i~W~ 28 (91)
T d1xiwa_ 6 VSISGTTVILT--CPQYPGSE-ILWQ 28 (91)
T ss_dssp EEEETTEEEEE--CSSCTTSC-EEEE
T ss_pred EEEeCCEEEEE--CCCCCCCc-eeee
Confidence 45688999997 99775544 7888
No 9
>d2pn2a1 d.227.1.1 (A:1-132) Uncharacterized protein Psyc0566 {Psychrobacter arcticus 273-4 [TaxId: 259536]}
Probab=18.35 E-value=16 Score=21.81 Aligned_cols=13 Identities=38% Similarity=0.792 Sum_probs=10.1
Q ss_pred EEeeecCCCCCcc
Q 034154 70 MAGYCPVSDDLEP 82 (102)
Q Consensus 70 laGyCpVsddlep 82 (102)
++-||||++-|.+
T Consensus 111 ~~~~CpV~~tL~~ 123 (132)
T d2pn2a1 111 TALTCPVAKSIHP 123 (132)
T ss_dssp HHHTSTTTTTSCT
T ss_pred HHccCcchHHhCC
Confidence 3568999988864
No 10
>d1nt0a2 b.23.1.1 (A:165-278) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=17.81 E-value=34 Score=19.42 Aligned_cols=11 Identities=18% Similarity=0.492 Sum_probs=7.9
Q ss_pred cceeeEEeeCC
Q 034154 81 EPCRWEILPAS 91 (102)
Q Consensus 81 epCrWei~pa~ 91 (102)
.=|.|.|.-..
T Consensus 26 ~~C~w~I~~p~ 36 (114)
T d1nt0a2 26 SSCAYNIRLEE 36 (114)
T ss_dssp CEEEEEEECCS
T ss_pred CeEEEEEEeCC
Confidence 34999997654
Done!