Your job contains 1 sequence.
>034157
MANTMARSFLQVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVL
EVTNCFPFPEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034157
(102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2196469 - symbol:TIF3H1 "AT1G10840" species:37... 451 1.2e-42 1
DICTYBASE|DDB_G0281153 - symbol:eif3H "eukaryotic transla... 293 6.6e-26 1
ASPGD|ASPL0000060185 - symbol:AN1270 species:162425 "Emer... 165 1.3e-18 2
ZFIN|ZDB-GENE-040808-19 - symbol:eif3ha "eukaryotic trans... 222 2.2e-18 1
ZFIN|ZDB-GENE-051030-42 - symbol:eif3hb "eukaryotic trans... 218 6.5e-18 1
UNIPROTKB|Q5PPY6 - symbol:eif3h "Eukaryotic translation i... 216 1.2e-17 1
UNIPROTKB|B5RI54 - symbol:eif3h "Eukaryotic translation i... 216 1.5e-17 1
UNIPROTKB|Q6P381 - symbol:eif3h "Eukaryotic translation i... 215 1.6e-17 1
UNIPROTKB|B5FY35 - symbol:EIF3H "Eukaryotic translation i... 215 2.0e-17 1
UNIPROTKB|Q5ZLE6 - symbol:EIF3H "Eukaryotic translation i... 211 5.9e-17 1
UNIPROTKB|Q56JZ5 - symbol:EIF3H "Eukaryotic translation i... 210 8.3e-17 1
UNIPROTKB|O15372 - symbol:EIF3H "Eukaryotic translation i... 210 8.3e-17 1
MGI|MGI:1915385 - symbol:Eif3h "eukaryotic translation in... 210 8.3e-17 1
RGD|735178 - symbol:Eif3h "eukaryotic translation initiat... 210 8.3e-17 1
UNIPROTKB|B3KS98 - symbol:EIF3S3 "Eukaryotic translation ... 210 1.0e-16 1
FB|FBgn0022023 - symbol:eIF-3p40 "Eukaryotic initiation f... 201 7.2e-16 1
UNIPROTKB|A4QT78 - symbol:MGG_05156 "Eukaryotic translati... 132 2.4e-14 2
UNIPROTKB|F1S1J9 - symbol:EIF3H "Uncharacterized protein"... 87 3.9e-08 2
POMBASE|SPAC821.05 - symbol:SPAC821.05 "translation initi... 128 1.1e-07 1
FB|FBgn0037270 - symbol:CG9769 species:7227 "Drosophila m... 116 1.4e-06 1
CGD|CAL0004868 - symbol:orf19.6748 species:5476 "Candida ... 117 1.5e-06 1
UNIPROTKB|Q5ADU3 - symbol:CaO19.14040 "Potential translat... 117 1.5e-06 1
UNIPROTKB|G4N5N6 - symbol:MGG_05274 "COP9 signalosome com... 103 5.5e-05 1
TAIR|locus:2166449 - symbol:RPN8A "AT5G05780" species:370... 102 5.8e-05 1
WB|WBGene00018135 - symbol:F37A4.5 species:6239 "Caenorha... 101 8.0e-05 1
CGD|CAL0003932 - symbol:orf19.7264 species:5476 "Candida ... 98 0.00016 1
TAIR|locus:2074653 - symbol:MEE34 "AT3G11270" species:370... 96 0.00027 1
ASPGD|ASPL0000076795 - symbol:AN4492 species:162425 "Emer... 95 0.00040 1
SGD|S000001900 - symbol:RPN11 "Metalloprotease subunit of... 94 0.00043 1
GENEDB_PFALCIPARUM|MAL13P1.343 - symbol:MAL13P1.343 "prot... 94 0.00044 1
UNIPROTKB|Q8ID28 - symbol:MAL13P1.343 "Proteasome regulat... 94 0.00044 1
DICTYBASE|DDB_G0279633 - symbol:psmD7 "26S proteasome non... 94 0.00048 1
>TAIR|locus:2196469 [details] [associations]
symbol:TIF3H1 "AT1G10840" species:3702 "Arabidopsis
thaliana" [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0003743 EMBL:AC007354
eggNOG:COG1310 HOGENOM:HOG000248787 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 EMBL:AF285833 EMBL:AY054641 EMBL:AY081546
EMBL:BT000765 EMBL:AY087338 IPI:IPI00526917 PIR:B86242
RefSeq:NP_563880.1 UniGene:At.17013 ProteinModelPortal:Q9C5Z2
IntAct:Q9C5Z2 STRING:Q9C5Z2 PaxDb:Q9C5Z2 PRIDE:Q9C5Z2
EnsemblPlants:AT1G10840.1 GeneID:837627 KEGG:ath:AT1G10840
TAIR:At1g10840 InParanoid:Q9C5Z2 PhylomeDB:Q9C5Z2
ProtClustDB:CLSN2687763 Genevestigator:Q9C5Z2 Uniprot:Q9C5Z2
Length = 337
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 89/102 (87%), Positives = 94/102 (92%)
Query: 4 TMARSFLQVAAAEE-VAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEV 62
TMARSFLQ + +E VAPPLRVVQIEGL +LKIIKHCKEFSP LVTGQLLGLDVGSVLEV
Sbjct: 3 TMARSFLQAISKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGSVLEV 62
Query: 63 TNCFPFP--EEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 102
TNCFPFP ++DEEIEADGANYQLEMMRCLREVNVDNNTVGW
Sbjct: 63 TNCFPFPVRDDDEEIEADGANYQLEMMRCLREVNVDNNTVGW 104
>DICTYBASE|DDB_G0281153 [details] [associations]
symbol:eif3H "eukaryotic translation initiation
factor 3 (eIF3) subunit H" species:44689 "Dictyostelium discoideum"
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0281153 GO:GO:0005737
GenomeReviews:CM000152_GR GO:GO:0006446 EMBL:AAFI02000040
GO:GO:0003743 eggNOG:NOG314046 KO:K03247 OMA:NCFPFPK HAMAP:MF_03007
RefSeq:XP_640846.1 STRING:Q54UD0 PRIDE:Q54UD0
EnsemblProtists:DDB0233918 GeneID:8622902 KEGG:ddi:DDB_G0281153
ProtClustDB:CLSZ2430573 Uniprot:Q54UD0
Length = 319
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 58/83 (69%), Positives = 68/83 (81%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPEEDEEIEADG-- 79
L VVQI+GLV+LKIIK CKE+ P LV GQLLGLD+G+ LEV+NCFPFP D+E E
Sbjct: 16 LDVVQIDGLVVLKIIKQCKEYLPELVPGQLLGLDIGTSLEVSNCFPFPPRDQEDENSESI 75
Query: 80 ANYQLEMMRCLREVNVDNNTVGW 102
A+YQLEMMR LREVN+D+NTVGW
Sbjct: 76 ADYQLEMMRFLREVNIDSNTVGW 98
>ASPGD|ASPL0000060185 [details] [associations]
symbol:AN1270 species:162425 "Emericella nidulans"
[GO:0016282 "eukaryotic 43S preinitiation complex" evidence=IEA]
[GO:0071541 "eukaryotic translation initiation factor 3 complex,
eIF3m" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030437
"ascospore formation" evidence=IEA] [GO:0071585 "detoxification of
cadmium ion" evidence=IEA] [GO:0071276 "cellular response to
cadmium ion" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005737 EMBL:BN001308 EMBL:AACD01000017
GO:GO:0003743 eggNOG:NOG314046 HOGENOM:HOG000248787 KO:K03247
OMA:NCFPFPK HAMAP:MF_03007 RefSeq:XP_658874.1 STRING:Q5BDW0
PRIDE:Q5BDW0 GeneID:2877041 KEGG:ani:AN1270.2 OrthoDB:EOG4T1MWT
Uniprot:Q5BDW0
Length = 366
Score = 165 (63.1 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 15 AEEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFP--EED 72
AE+ PL V++E LV++KIIKHC + P TG ++G+DV VLE+TN FPFP E
Sbjct: 2 AEKEVTPLTAVKVEALVVMKIIKHCSQVFPTTATGSIVGMDVDGVLEITNTFPFPVVEVP 61
Query: 73 EEIEADGA 80
E D A
Sbjct: 62 PESHFDNA 69
Score = 85 (35.0 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 16/21 (76%), Positives = 17/21 (80%)
Query: 82 YQLEMMRCLREVNVDNNTVGW 102
YQ EM+R LREVNVD N VGW
Sbjct: 86 YQAEMIRMLREVNVDANNVGW 106
>ZFIN|ZDB-GENE-040808-19 [details] [associations]
symbol:eif3ha "eukaryotic translation initiation
factor 3, subunit H, a" species:7955 "Danio rerio" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=IEA;ISS]
[GO:0003743 "translation initiation factor activity"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007420 "brain
development" evidence=IMP] [GO:0048882 "lateral line development"
evidence=IMP] [GO:0001944 "vasculature development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-040808-19 GO:GO:0007420 GO:GO:0006413 GO:GO:0003743
GO:GO:0001944 GO:GO:0005852 EMBL:BC079514 IPI:IPI00496845
RefSeq:NP_001003763.1 UniGene:Dr.150579 STRING:Q6AXJ2
MEROPS:M67.971 PRIDE:Q6AXJ2 Ensembl:ENSDART00000044634
Ensembl:ENSDART00000110583 GeneID:445306 KEGG:dre:445306 CTD:445306
eggNOG:NOG314046 GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
NextBio:20832051 ArrayExpress:Q6AXJ2 Bgee:Q6AXJ2 GO:GO:0048882
HAMAP:MF_03007 Uniprot:Q6AXJ2
Length = 335
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 45/85 (52%), Positives = 60/85 (70%)
Query: 21 PLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEA 77
P++ +Q++GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP+ E+ +E
Sbjct: 18 PVKQIQVDGLVVLKIIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDVEF 77
Query: 78 DGANYQLEMMRCLREVNVDNNTVGW 102
D YQ+EMMR LR VN+D+ VGW
Sbjct: 78 DEVQYQMEMMRSLRHVNIDHLHVGW 102
>ZFIN|ZDB-GENE-051030-42 [details] [associations]
symbol:eif3hb "eukaryotic translation initiation
factor 3, subunit H, b" species:7955 "Danio rerio" [GO:0006413
"translational initiation" evidence=IEA;ISS] [GO:0003743
"translation initiation factor activity" evidence=IEA;ISS]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006412 "translation" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
ZFIN:ZDB-GENE-051030-42 GO:GO:0007420 GO:GO:0007507 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF HAMAP:MF_03007
EMBL:BC086809 EMBL:BC107824 IPI:IPI00655366 RefSeq:NP_001030341.1
UniGene:Dr.86151 STRING:Q5PR67 PRIDE:Q5PR67 GeneID:567151
KEGG:dre:567151 CTD:567151 NextBio:20888545 Uniprot:Q5PR67
Length = 333
Score = 218 (81.8 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 21 PLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEA 77
P++ +QIEGLV++KIIKH +E +V G LLGL V LE+TNCFPFP+ E+ +
Sbjct: 16 PVKQIQIEGLVVMKIIKHYQEEGQGSEVVQGVLLGLVVEDQLEITNCFPFPQHTEDDADF 75
Query: 78 DGANYQLEMMRCLREVNVDNNTVGW 102
D YQ+EMMR LR VN+D+ VGW
Sbjct: 76 DEVQYQMEMMRSLRHVNIDHLHVGW 100
>UNIPROTKB|Q5PPY6 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8355 "Xenopus laevis" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 KO:K03247
HAMAP:MF_03007 CTD:8667 EMBL:BC087438 RefSeq:NP_001088779.1
UniGene:Xl.7704 GeneID:496043 KEGG:xla:496043
Xenbase:XB-GENE-958120 Uniprot:Q5PPY6
Length = 334
Score = 216 (81.1 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 45/84 (53%), Positives = 59/84 (70%)
Query: 22 LRVVQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEAD 78
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP+ E+ ++ D
Sbjct: 18 VKQVQIDGLVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFPQHTEDDVDFD 77
Query: 79 GANYQLEMMRCLREVNVDNNTVGW 102
YQ+EMMR LR VN+D+ VGW
Sbjct: 78 EVQYQMEMMRSLRHVNIDHLHVGW 101
>UNIPROTKB|B5RI54 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8030 "Salmo salar" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 HOVERGEN:HBG000883 HAMAP:MF_03007
EMBL:BT043978 UniGene:Ssa.31091 Uniprot:B5RI54
Length = 344
Score = 216 (81.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 21 PLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEA 77
P++ +QIEGLV+LK+IKH +E +V G LLGL V LE+TNCFPFP+ E+ +
Sbjct: 27 PVKQIQIEGLVVLKMIKHYQEEGQGSEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADF 86
Query: 78 DGANYQLEMMRCLREVNVDNNTVGW 102
D YQ+EMMR LR VN+D+ VGW
Sbjct: 87 DEVQYQMEMMRSLRHVNIDHLHVGW 111
>UNIPROTKB|Q6P381 [details] [associations]
symbol:eif3h "Eukaryotic translation initiation factor 3
subunit H" species:8364 "Xenopus (Silurana) tropicalis" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 HAMAP:MF_03007
CTD:8667 EMBL:BC064151 RefSeq:NP_989359.1 UniGene:Str.1956
ProteinModelPortal:Q6P381 STRING:Q6P381 GeneID:394989
KEGG:xtr:394989 Xenbase:XB-GENE-958115 InParanoid:Q6P381
OrthoDB:EOG4VQ9PV Uniprot:Q6P381
Length = 335
Score = 215 (80.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 47/93 (50%), Positives = 62/93 (66%)
Query: 13 AAAEEVAPPLRVVQIEGLVMLKIIKHCKE--FSPALVTGQLLGLDVGSVLEVTNCFPFPE 70
A E A ++ VQI+G+V+LKIIKH +E +V G LLGL V LE+TNCFPFP+
Sbjct: 12 ATVAETA--VKQVQIDGMVVLKIIKHYQEEGHGSEVVQGVLLGLVVDDRLEITNCFPFPQ 69
Query: 71 EDEE-IEADGANYQLEMMRCLREVNVDNNTVGW 102
E+ ++ D YQ+EMMR LR VN+D+ VGW
Sbjct: 70 HTEDDVDFDEVQYQMEMMRSLRHVNIDHLHVGW 102
>UNIPROTKB|B5FY35 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:59729 "Taeniopygia guttata" [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0003743
"translation initiation factor activity" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:DQ213760 RefSeq:NP_001232560.1
UniGene:Tgu.10677 STRING:B5FY35 PRIDE:B5FY35 GeneID:100190645
KEGG:tgu:100190645 Uniprot:B5FY35
Length = 348
Score = 215 (80.7 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 49/95 (51%), Positives = 64/95 (67%)
Query: 11 QVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPF 68
+ AAA + A ++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPF
Sbjct: 23 KAAAAGDSA--VKQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPF 80
Query: 69 PEEDEE-IEADGANYQLEMMRCLREVNVDNNTVGW 102
P+ E+ + D YQ+EMMR LR VN+D+ VGW
Sbjct: 81 PQHTEDDADFDEVQYQMEMMRSLRHVNIDHLHVGW 115
>UNIPROTKB|Q5ZLE6 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9031 "Gallus gallus" [GO:0006413 "translational
initiation" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0006413 GO:GO:0003743
GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:AJ719788 IPI:IPI00592172
RefSeq:NP_001026122.1 UniGene:Gga.4721 STRING:Q5ZLE6 PRIDE:Q5ZLE6
Ensembl:ENSGALT00000025971 GeneID:420288 KEGG:gga:420288
InParanoid:Q5ZLE6 NextBio:20823227 Uniprot:Q5ZLE6
Length = 348
Score = 211 (79.3 bits), Expect = 5.9e-17, P = 5.9e-17
Identities = 45/84 (53%), Positives = 58/84 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEAD 78
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP+ E+ + D
Sbjct: 32 VKQVQIDGLVVLKIIKHYQEEGQGNEVVQGVLLGLVVDDRLEITNCFPFPQHTEDDADFD 91
Query: 79 GANYQLEMMRCLREVNVDNNTVGW 102
YQ+EMMR LR VN+D+ VGW
Sbjct: 92 EVQYQMEMMRSLRHVNIDHLHVGW 115
>UNIPROTKB|Q56JZ5 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9913 "Bos taurus" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006413
GO:GO:0003743 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 EMBL:AY911332 EMBL:BC102096 IPI:IPI00714818
RefSeq:NP_001020493.1 UniGene:Bt.16723 STRING:Q56JZ5 PRIDE:Q56JZ5
Ensembl:ENSBTAT00000018645 GeneID:506873 KEGG:bta:506873 CTD:8667
InParanoid:Q56JZ5 NextBio:20867779 Uniprot:Q56JZ5
Length = 352
Score = 210 (79.0 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 45/84 (53%), Positives = 58/84 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEAD 78
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP+ E+ + D
Sbjct: 36 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFD 95
Query: 79 GANYQLEMMRCLREVNVDNNTVGW 102
YQ+EMMR LR VN+D+ VGW
Sbjct: 96 EVQYQMEMMRSLRHVNIDHLHVGW 119
>UNIPROTKB|O15372 [details] [associations]
symbol:EIF3H "Eukaryotic translation initiation factor 3
subunit H" species:9606 "Homo sapiens" [GO:0005515 "protein
binding" evidence=IPI] [GO:0006413 "translational initiation"
evidence=IC;IDA;TAS] [GO:0006446 "regulation of translational
initiation" evidence=TAS] [GO:0003743 "translation initiation
factor activity" evidence=IC;IDA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0006412 "translation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0044267 "cellular
protein metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_17015
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
GO:GO:0006413 GO:GO:0006446 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 HOVERGEN:HBG000883 KO:K03247
OrthoDB:EOG4SJ5FF HAMAP:MF_03007 Reactome:REACT_1762 CTD:8667
EMBL:U54559 EMBL:AF092576 EMBL:AF092569 EMBL:AF092570 EMBL:AF092571
EMBL:AF092572 EMBL:AF092573 EMBL:AF092574 EMBL:AF092575
EMBL:BC000386 IPI:IPI00977658 RefSeq:NP_003747.1 UniGene:Hs.492599
ProteinModelPortal:O15372 SMR:O15372 DIP:DIP-33689N IntAct:O15372
MINT:MINT-5000446 STRING:O15372 PhosphoSite:O15372 PaxDb:O15372
PRIDE:O15372 DNASU:8667 Ensembl:ENST00000521861 GeneID:8667
KEGG:hsa:8667 UCSC:uc003yoa.3 GeneCards:GC08M117727 HGNC:HGNC:3273
HPA:HPA023117 HPA:HPA023553 MIM:603912 neXtProt:NX_O15372
PharmGKB:PA162384854 InParanoid:O15372 PhylomeDB:O15372
ChiTaRS:EIF3H GenomeRNAi:8667 NextBio:32511 ArrayExpress:O15372
Bgee:O15372 CleanEx:HS_EIF3H Genevestigator:O15372
GermOnline:ENSG00000147677 Uniprot:O15372
Length = 352
Score = 210 (79.0 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 45/84 (53%), Positives = 58/84 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEAD 78
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP+ E+ + D
Sbjct: 36 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFD 95
Query: 79 GANYQLEMMRCLREVNVDNNTVGW 102
YQ+EMMR LR VN+D+ VGW
Sbjct: 96 EVQYQMEMMRSLRHVNIDHLHVGW 119
>MGI|MGI:1915385 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3,
subunit H" species:10090 "Mus musculus" [GO:0003743 "translation
initiation factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=ISO;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1915385 GO:GO:0006413 GO:GO:0003743 GO:GO:0005852
MEROPS:M67.971 eggNOG:NOG314046 GeneTree:ENSGT00550000074674
HOGENOM:HOG000248787 HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 CTD:8667 EMBL:BC014755 IPI:IPI00128202
RefSeq:NP_542366.1 UniGene:Mm.289800 ProteinModelPortal:Q91WK2
SMR:Q91WK2 MINT:MINT-4098428 STRING:Q91WK2 PhosphoSite:Q91WK2
PaxDb:Q91WK2 PRIDE:Q91WK2 Ensembl:ENSMUST00000022925 GeneID:68135
KEGG:mmu:68135 InParanoid:Q91WK2 NextBio:326504 Bgee:Q91WK2
Genevestigator:Q91WK2 GermOnline:ENSMUSG00000022312 Uniprot:Q91WK2
Length = 352
Score = 210 (79.0 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 45/84 (53%), Positives = 58/84 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEAD 78
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP+ E+ + D
Sbjct: 36 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFD 95
Query: 79 GANYQLEMMRCLREVNVDNNTVGW 102
YQ+EMMR LR VN+D+ VGW
Sbjct: 96 EVQYQMEMMRSLRHVNIDHLHVGW 119
>RGD|735178 [details] [associations]
symbol:Eif3h "eukaryotic translation initiation factor 3, subunit
H" species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=ISO;ISS] [GO:0006413
"translational initiation" evidence=ISO;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
RGD:735178 GO:GO:0043231 GO:GO:0032403 GO:GO:0006413 GO:GO:0003743
EMBL:CH473950 GO:GO:0005852 MEROPS:M67.971 eggNOG:NOG314046
GeneTree:ENSGT00550000074674 HOGENOM:HOG000248787
HOVERGEN:HBG000883 KO:K03247 OMA:NCFPFPK OrthoDB:EOG4SJ5FF
HAMAP:MF_03007 CTD:8667 EMBL:BC060586 IPI:IPI00208038
RefSeq:NP_942046.1 RefSeq:XP_003750149.1 UniGene:Rn.129213
STRING:Q6P9U8 PhosphoSite:Q6P9U8 PRIDE:Q6P9U8
Ensembl:ENSRNOT00000005786 GeneID:100911110 GeneID:299899
KEGG:rno:100911110 KEGG:rno:299899 UCSC:RGD:735178
InParanoid:Q6P9U8 NextBio:645940 Genevestigator:Q6P9U8
Uniprot:Q6P9U8
Length = 352
Score = 210 (79.0 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 45/84 (53%), Positives = 58/84 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEAD 78
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP+ E+ + D
Sbjct: 36 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFD 95
Query: 79 GANYQLEMMRCLREVNVDNNTVGW 102
YQ+EMMR LR VN+D+ VGW
Sbjct: 96 EVQYQMEMMRSLRHVNIDHLHVGW 119
>UNIPROTKB|B3KS98 [details] [associations]
symbol:EIF3S3 "Eukaryotic translation initiation factor 3,
subunit 3 gamma, 40kDa, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005737 EMBL:CH471060
GO:GO:0003743 HOGENOM:HOG000248787 HOVERGEN:HBG000883 OMA:NCFPFPK
UniGene:Hs.492599 HGNC:HGNC:3273 ChiTaRS:EIF3H EMBL:AP002905
EMBL:AC023520 EMBL:AK093128 IPI:IPI00647650
ProteinModelPortal:B3KS98 SMR:B3KS98 STRING:B3KS98 PRIDE:B3KS98
Ensembl:ENST00000276682 UCSC:uc003yob.3 ArrayExpress:B3KS98
Bgee:B3KS98 Uniprot:B3KS98
Length = 366
Score = 210 (79.0 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 45/84 (53%), Positives = 58/84 (69%)
Query: 22 LRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGSVLEVTNCFPFPEEDEE-IEAD 78
++ VQI+GLV+LKIIKH +E +V G LLGL V LE+TNCFPFP+ E+ + D
Sbjct: 50 VKQVQIDGLVVLKIIKHYQEEGQGTEVVQGVLLGLVVEDRLEITNCFPFPQHTEDDADFD 109
Query: 79 GANYQLEMMRCLREVNVDNNTVGW 102
YQ+EMMR LR VN+D+ VGW
Sbjct: 110 EVQYQMEMMRSLRHVNIDHLHVGW 133
>FB|FBgn0022023 [details] [associations]
symbol:eIF-3p40 "Eukaryotic initiation factor 3 p40 subunit"
species:7227 "Drosophila melanogaster" [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0005829
EMBL:AE014134 GO:GO:0022008 GO:GO:0003743 eggNOG:COG1310
GO:GO:0005852 GeneTree:ENSGT00550000074674 KO:K03247 OMA:NCFPFPK
HAMAP:MF_03007 EMBL:AF160896 EMBL:BT071794 RefSeq:NP_524834.2
RefSeq:NP_995631.1 UniGene:Dm.1462 ProteinModelPortal:Q9U9Q4
IntAct:Q9U9Q4 MINT:MINT-1564430 STRING:Q9U9Q4 PaxDb:Q9U9Q4
PRIDE:Q9U9Q4 EnsemblMetazoa:FBtr0079030 EnsemblMetazoa:FBtr0079031
GeneID:45682 KEGG:dme:Dmel_CG9124 UCSC:CG9124-RA CTD:45682
FlyBase:FBgn0022023 InParanoid:Q9U9Q4 OrthoDB:EOG4JWSW1
PhylomeDB:Q9U9Q4 ChiTaRS:eIF-3p40 GenomeRNAi:45682 NextBio:838284
Bgee:Q9U9Q4 Uniprot:Q9U9Q4
Length = 338
Score = 201 (75.8 bits), Expect = 7.2e-16, P = 7.2e-16
Identities = 48/104 (46%), Positives = 60/104 (57%)
Query: 1 MANTMARSFLQVAAAEEVAPPLRVVQIEGLVMLKIIKHCKEFSPA--LVTGQLLGLDVGS 58
MAN R A E+ + VQ +GL ++K++KHC E S L G LLGL V
Sbjct: 1 MANRANR---HAARTEDSDNTINYVQCDGLAVMKMVKHCHEESSNMDLAQGALLGLVVDK 57
Query: 59 VLEVTNCFPFPEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 102
LE+TNCFPFP+ +E D YQL +MR LR VNVD+ VGW
Sbjct: 58 CLEITNCFPFPKSGDET-MDEEMYQLTVMRRLRRVNVDHLHVGW 100
>UNIPROTKB|A4QT78 [details] [associations]
symbol:MGG_05156 "Eukaryotic translation initiation factor
3 subunit H" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005737 EMBL:CM001233 GO:GO:0003743
eggNOG:NOG314046 KO:K03247 HAMAP:MF_03007 OrthoDB:EOG4T1MWT
RefSeq:XP_003712690.1 ProteinModelPortal:A4QT78 STRING:A4QT78
EnsemblFungi:MGG_05156T0 GeneID:2675614 KEGG:mgr:MGG_05156
Uniprot:A4QT78
Length = 363
Score = 132 (51.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 21 PLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPEED 72
P++ VQ+E LV++KI KHC P + TG ++G+D +++EVTN FP D
Sbjct: 9 PIKSVQVEALVVMKIAKHCSSSFPTIATGSIVGMDNDTLVEVTNSLNFPTVD 60
Score = 79 (32.9 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 82 YQLEMMRCLREVNVDNNTVGW 102
YQ EM++ LREVNVD N VGW
Sbjct: 89 YQAEMIKHLREVNVDANCVGW 109
>UNIPROTKB|F1S1J9 [details] [associations]
symbol:EIF3H "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0006413 GO:GO:0005852
GeneTree:ENSGT00550000074674 OMA:NCFPFPK EMBL:CU914669
Ensembl:ENSSSCT00000006602 Uniprot:F1S1J9
Length = 327
Score = 87 (35.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 72 DEEIEADGANYQLEMMRCLREVNVDNNTVGW 102
+++ + D YQ+EMMR LR VN+D+ VGW
Sbjct: 64 EDDADFDEVQYQMEMMRSLRHVNIDHLHVGW 94
Score = 65 (27.9 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 13/20 (65%), Positives = 18/20 (90%)
Query: 22 LRVVQIEGLVMLKIIKHCKE 41
++ VQI+GLV+LKIIKH +E
Sbjct: 36 VKQVQIDGLVVLKIIKHYQE 55
>POMBASE|SPAC821.05 [details] [associations]
symbol:SPAC821.05 "translation initiation factor eIF3h
(p40)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IDA] [GO:0006413 "translational initiation" evidence=IC]
[GO:0016282 "eukaryotic 43S preinitiation complex" evidence=IDA]
[GO:0030437 "ascospore formation" evidence=IMP] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071540
"eukaryotic translation initiation factor 3 complex, eIF3e"
evidence=IDA] [GO:0071541 "eukaryotic translation initiation factor
3 complex, eIF3m" evidence=IDA] [GO:0071585 "detoxification of
cadmium ion" evidence=IMP] [GO:0003743 "translation initiation
factor activity" evidence=IC] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 PomBase:SPAC821.05 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0071276 GO:GO:0071585
GO:GO:0003743 GO:GO:0030437 GO:GO:0004843 GO:GO:0002183
eggNOG:NOG314046 HOGENOM:HOG000248787 KO:K03247 HAMAP:MF_03007
GO:GO:0016282 GO:GO:0071540 GO:GO:0071541 OrthoDB:EOG4T1MWT
PIR:T41716 RefSeq:NP_593158.1 ProteinModelPortal:Q9UT48
STRING:Q9UT48 EnsemblFungi:SPAC821.05.1 GeneID:2543153
KEGG:spo:SPAC821.05 OMA:HEANNIA NextBio:20804180 Uniprot:Q9UT48
Length = 357
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 19 APPLRVVQIEGLVMLKIIKHCKEFSPALVT-GQLLGLDVGSVLEVTNCFPFPE--EDEEI 75
+PP+ V++E L+++ IIKHC++ P + T GQL+G+D+ VL+V++ F P E+EE
Sbjct: 14 SPPIERVELESLLVMNIIKHCRDSFPNMGTIGQLVGIDIDGVLQVSSSFESPSVLENEES 73
Query: 76 EAD----GANYQLE---MMRCLREVNVDNNTVGW 102
+ G Q M+ L+ + VGW
Sbjct: 74 AVNKSVSGKARQAHTEAMLNRLQYIGAVTGHVGW 107
>FB|FBgn0037270 [details] [associations]
symbol:CG9769 species:7227 "Drosophila melanogaster"
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=ISS] [GO:0006413 "translational initiation" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0048102 "autophagic cell death" evidence=IEP] [GO:0035071
"salivary gland cell autophagic cell death" evidence=IEP]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE014297
GO:GO:0035071 GO:GO:0003743 eggNOG:COG1310 GO:GO:0005852
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00530000063075
EMBL:AY118972 RefSeq:NP_649489.1 UniGene:Dm.11029
ProteinModelPortal:Q9VN50 SMR:Q9VN50 IntAct:Q9VN50 MINT:MINT-891663
STRING:Q9VN50 MEROPS:M67.975 PaxDb:Q9VN50 PRIDE:Q9VN50
EnsemblMetazoa:FBtr0078892 GeneID:40587 KEGG:dme:Dmel_CG9769
UCSC:CG9769-RA FlyBase:FBgn0037270 InParanoid:Q9VN50 KO:K03249
OMA:HPVVLFQ OrthoDB:EOG43TXBB PhylomeDB:Q9VN50 ChiTaRS:CG9769
GenomeRNAi:40587 NextBio:819523 Bgee:Q9VN50 HAMAP:MF_03005
Uniprot:Q9VN50
Length = 280
Score = 116 (45.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 47 VTGQLLG-LDVGSVLEVTNCF--PFPEEDEEIEADGANYQLEMMRCLREVNVDNNTVGW 102
V G LLG +D G V+EVTNCF P E D+++EA+ +Y L+M R+VN + + VGW
Sbjct: 32 VIGTLLGSVDKG-VVEVTNCFCVPHKEHDDQVEAE-LSYALDMYDLNRKVNSNESVVGW 88
>CGD|CAL0004868 [details] [associations]
symbol:orf19.6748 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0016282 "eukaryotic 43S
preinitiation complex" evidence=IEA] [GO:0071541 "eukaryotic
translation initiation factor 3 complex, eIF3m" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0071540 "eukaryotic
translation initiation factor 3 complex, eIF3e" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030437 "ascospore
formation" evidence=IEA] [GO:0071313 "cellular response to
caffeine" evidence=IEA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 CGD:CAL0004868 EMBL:AACQ01000029 EMBL:AACQ01000028
eggNOG:NOG314046 KO:K03247 RefSeq:XP_719728.1 RefSeq:XP_719845.1
ProteinModelPortal:Q5ADU3 STRING:Q5ADU3 GeneID:3638485
GeneID:3638582 KEGG:cal:CaO19.14040 KEGG:cal:CaO19.6748
Uniprot:Q5ADU3
Length = 328
Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 15 AEEVAPP-LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPEEDE 73
A + P L V I V+L +++H E P L +G LLG + S+++VT+ FP+P D+
Sbjct: 2 ASKYTPATLNTVHISSSVLLSLLRHTSEHYPQLFSGALLGFEDESLIDVTHGFPYPYPDQ 61
Query: 74 EI-----EADGANYQLEMMRCLREVNVDNNTVGW 102
G YQ +++ +++ +GW
Sbjct: 62 YEGGSFRSRSGGQYQKDLLENFKKLGYGIEFLGW 95
>UNIPROTKB|Q5ADU3 [details] [associations]
symbol:CaO19.14040 "Potential translation initiation factor
eIF3-gamma-p40 subunit" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 CGD:CAL0004868 EMBL:AACQ01000029
EMBL:AACQ01000028 eggNOG:NOG314046 KO:K03247 RefSeq:XP_719728.1
RefSeq:XP_719845.1 ProteinModelPortal:Q5ADU3 STRING:Q5ADU3
GeneID:3638485 GeneID:3638582 KEGG:cal:CaO19.14040
KEGG:cal:CaO19.6748 Uniprot:Q5ADU3
Length = 328
Score = 117 (46.2 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 15 AEEVAPP-LRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPEEDE 73
A + P L V I V+L +++H E P L +G LLG + S+++VT+ FP+P D+
Sbjct: 2 ASKYTPATLNTVHISSSVLLSLLRHTSEHYPQLFSGALLGFEDESLIDVTHGFPYPYPDQ 61
Query: 74 EI-----EADGANYQLEMMRCLREVNVDNNTVGW 102
G YQ +++ +++ +GW
Sbjct: 62 YEGGSFRSRSGGQYQKDLLENFKKLGYGIEFLGW 95
>UNIPROTKB|G4N5N6 [details] [associations]
symbol:MGG_05274 "COP9 signalosome complex subunit 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 EMBL:CM001233 KO:K09613 MEROPS:M67.002
RefSeq:XP_003712833.1 ProteinModelPortal:G4N5N6
EnsemblFungi:MGG_05274T0 GeneID:2675301 KEGG:mgr:MGG_05274
Uniprot:G4N5N6
Length = 344
Score = 103 (41.3 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 28/82 (34%), Positives = 41/82 (50%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPEEDEE--IEA-DGAN 81
V+I + ++K++ H + V G + G G+ L VT+ F P E E + A D AN
Sbjct: 51 VRISAIALIKMVMHARSGGSLEVMGMMQGYVDGTALVVTDAFRLPVEGTETRVNAHDEAN 110
Query: 82 -YQLEMMRCLREVNVDNNTVGW 102
Y +E +R RE N VGW
Sbjct: 111 EYLVEYLRLSREQGRLENVVGW 132
>TAIR|locus:2166449 [details] [associations]
symbol:RPN8A "AT5G05780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000502
GO:GO:0009965 eggNOG:COG1310 EMBL:AB005237 InterPro:IPR024969
Pfam:PF13012 KO:K03038 EMBL:U54560 EMBL:AF378878 EMBL:BT002610
EMBL:AY087393 IPI:IPI00538047 RefSeq:NP_196197.1 UniGene:At.20537
UniGene:At.67787 ProteinModelPortal:O24412 SMR:O24412 IntAct:O24412
STRING:O24412 PaxDb:O24412 PRIDE:O24412 EnsemblPlants:AT5G05780.1
GeneID:830463 KEGG:ath:AT5G05780 TAIR:At5g05780
HOGENOM:HOG000209236 InParanoid:O24412 OMA:RSIIALH PhylomeDB:O24412
ProtClustDB:PLN03246 Genevestigator:O24412 GermOnline:AT5G05780
Uniprot:O24412
Length = 308
Score = 102 (41.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 10 LQVAAAEEV-APPLRVVQIEGLVMLKIIKHCKEF---SPALVTGQLLGLDVGSVLEVTNC 65
+ V +++ A + V + LV+L I+ H S V G LLG V++VTN
Sbjct: 1 MDVIKTQQISARTIEKVVVHPLVLLSIVDHYNRVAKDSSKRVVGVLLGSSSRGVVDVTNS 60
Query: 66 F--PFPEEDEE--IEADGANYQLEMMRCLREVNVDNNTVGW 102
+ PF E+D++ I NY M + +N + VGW
Sbjct: 61 YAVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGW 101
>WB|WBGene00018135 [details] [associations]
symbol:F37A4.5 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000003 eggNOG:COG1310
EMBL:FO081312 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
PIR:S44642 RefSeq:NP_498470.1 UniGene:Cel.10529
ProteinModelPortal:P41883 SMR:P41883 IntAct:P41883 STRING:P41883
MEROPS:M67.A10 PaxDb:P41883 PRIDE:P41883 EnsemblMetazoa:F37A4.5.1
EnsemblMetazoa:F37A4.5.2 GeneID:185404 KEGG:cel:CELE_F37A4.5
UCSC:F37A4.5 CTD:185404 WormBase:F37A4.5 InParanoid:P41883
OMA:KMLRHAR NextBio:928158 Uniprot:P41883
Length = 319
Score = 101 (40.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPEEDEEIEADGAN-- 81
V I L +LK+++H + P V G +LG V + VT+ F P+ + + +
Sbjct: 29 VNISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAMPQSGTSVTVESVDPV 88
Query: 82 YQLEMMRCLREVNVDNNTVGW 102
YQ + M L+ V N VGW
Sbjct: 89 YQTKHMDLLKLVGRTENVVGW 109
>CGD|CAL0003932 [details] [associations]
symbol:orf19.7264 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0000266 "mitochondrial fission"
evidence=IEA] [GO:0016559 "peroxisome fission" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 CGD:CAL0003932
eggNOG:COG1310 MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012
EMBL:AACQ01000092 HOGENOM:HOG000183690 KO:K03030 RefSeq:XP_715061.1
ProteinModelPortal:Q59ZS7 STRING:Q59ZS7 GeneID:3643326
KEGG:cal:CaO19.7264 Uniprot:Q59ZS7
Length = 312
Score = 98 (39.6 bits), Expect = 0.00016, P = 0.00016
Identities = 25/81 (30%), Positives = 39/81 (48%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPEEDEEIEADGAN-- 81
V I L +LK++KH + P V G +LG V + V + F P+ + + +
Sbjct: 33 VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDFTIHVHDVFAMPQSGTGVSVEAVDDV 92
Query: 82 YQLEMMRCLREVNVDNNTVGW 102
+Q +MM LR+ D VGW
Sbjct: 93 FQTKMMDMLRQTGRDQMVVGW 113
>TAIR|locus:2074653 [details] [associations]
symbol:MEE34 "AT3G11270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010564 "regulation of
cell cycle process" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009793
GO:GO:0030163 GO:GO:0000502 EMBL:AC073395 InterPro:IPR024969
Pfam:PF13012 KO:K03038 HOGENOM:HOG000209236 ProtClustDB:PLN03246
MEROPS:M67.973 EMBL:AY258412 EMBL:AK228032 IPI:IPI00536063
RefSeq:NP_187736.1 UniGene:At.39785 ProteinModelPortal:Q9C774
SMR:Q9C774 IntAct:Q9C774 STRING:Q9C774 PRIDE:Q9C774 DNASU:820298
EnsemblPlants:AT3G11270.1 GeneID:820298 KEGG:ath:AT3G11270
TAIR:At3g11270 InParanoid:Q9C774 OMA:INAKEHI PhylomeDB:Q9C774
Genevestigator:Q9C774 Uniprot:Q9C774
Length = 310
Score = 96 (38.9 bits), Expect = 0.00027, P = 0.00027
Identities = 30/102 (29%), Positives = 49/102 (48%)
Query: 10 LQVAAAEEV-APPLRVVQIEGLVMLKIIKH----CKEFSPALVTGQLLGLDVGSVLEVTN 64
+ V +++ A + V + LV+L I+ H K+ S +V G LLG ++VTN
Sbjct: 1 MDVIKTQQISARTIEKVIVHPLVLLSIVDHYNRVAKDTSKRVV-GVLLGSSSRGTVDVTN 59
Query: 65 CF--PFPEEDEE--IEADGANYQLEMMRCLREVNVDNNTVGW 102
+ PF E+D++ I NY M + +N + VGW
Sbjct: 60 SYAVPFEEDDKDTSIWFLDHNYHESMFHMFKRINAKEHIVGW 101
>ASPGD|ASPL0000076795 [details] [associations]
symbol:AN4492 species:162425 "Emericella nidulans"
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
[GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0000266
"mitochondrial fission" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034399 "nuclear
periphery" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0000502
EMBL:BN001303 InterPro:IPR024969 Pfam:PF13012
EnsemblFungi:CADANIAT00005953 OMA:GHAGADQ Uniprot:C8V8E2
Length = 338
Score = 95 (38.5 bits), Expect = 0.00040, P = 0.00040
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPEEDEEIEADGAN-- 81
V I L +LK+++H + P V G +LG V + VT+ F P+ + + +
Sbjct: 35 VHISSLALLKMLRHGRAGVPMEVMGLMLGEFVDEYTVRVTDVFAMPQSGTGVSVEAVDPV 94
Query: 82 YQLEMMRCLREVNVDNNTVGW 102
+Q +MM LR+ VGW
Sbjct: 95 FQTKMMDMLRQTGRPEPVVGW 115
>SGD|S000001900 [details] [associations]
symbol:RPN11 "Metalloprotease subunit of the 19S regulatory
particle of the 26S pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016559 "peroxisome fission" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IMP] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=IGI;IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0000266
"mitochondrial fission" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 SGD:S000001900 GO:GO:0005739
GO:GO:0005634 GO:GO:0043161 EMBL:D50617 EMBL:BK006940 GO:GO:0008237
GO:GO:0016559 GO:GO:0008541 eggNOG:COG1310 MEROPS:M67.001
GO:GO:0004843 GO:GO:0016579 GO:GO:0000266 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
OrthoDB:EOG40CMRT EMBL:X79561 EMBL:AY152546 EMBL:AY692755
PIR:S56259 RefSeq:NP_116659.1 ProteinModelPortal:P43588 SMR:P43588
DIP:DIP-1573N IntAct:P43588 MINT:MINT-405184 STRING:P43588
PaxDb:P43588 PeptideAtlas:P43588 PRIDE:P43588 EnsemblFungi:YFR004W
GeneID:850554 KEGG:sce:YFR004W CYGD:YFR004w NextBio:966339
Genevestigator:P43588 GermOnline:YFR004W Uniprot:P43588
Length = 306
Score = 94 (38.1 bits), Expect = 0.00043, P = 0.00043
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 25 VQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPEEDEEIEADGAN-- 81
V I + +LK++KH + P V G +LG V + V + F P+ + + +
Sbjct: 27 VYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDV 86
Query: 82 YQLEMMRCLREVNVDNNTVGW 102
+Q +MM L++ D VGW
Sbjct: 87 FQAKMMDMLKQTGRDQMVVGW 107
>GENEDB_PFALCIPARUM|MAL13P1.343 [details] [associations]
symbol:MAL13P1.343 "proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 94 (38.1 bits), Expect = 0.00044, P = 0.00044
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 16 EEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPEEDEE 74
E +A V I L +LKI+KH + P V G +LG V + + + F P+
Sbjct: 24 ETLADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNS 83
Query: 75 IEADGAN--YQLEMMRCLREVNVDNNTVGW 102
+ + + YQ M+ L++ VGW
Sbjct: 84 VSVEAVDPVYQTNMLEELKKTGRHEMVVGW 113
>UNIPROTKB|Q8ID28 [details] [associations]
symbol:MAL13P1.343 "Proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 94 (38.1 bits), Expect = 0.00044, P = 0.00044
Identities = 25/90 (27%), Positives = 40/90 (44%)
Query: 16 EEVAPPLRVVQIEGLVMLKIIKHCKEFSPALVTGQLLGLDVGS-VLEVTNCFPFPEEDEE 74
E +A V I L +LKI+KH + P V G +LG V + + + F P+
Sbjct: 24 ETLADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAMPQSGNS 83
Query: 75 IEADGAN--YQLEMMRCLREVNVDNNTVGW 102
+ + + YQ M+ L++ VGW
Sbjct: 84 VSVEAVDPVYQTNMLEELKKTGRHEMVVGW 113
>DICTYBASE|DDB_G0279633 [details] [associations]
symbol:psmD7 "26S proteasome non-ATPase regulatory
subunit 7" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 dictyBase:DDB_G0279633 GenomeReviews:CM000152_GR
GO:GO:0006511 EMBL:AAFI02000032 eggNOG:COG1310 InterPro:IPR024969
Pfam:PF13012 KO:K03038 GO:GO:0005838 OMA:RSIIALH MEROPS:M67.973
RefSeq:XP_641565.1 ProteinModelPortal:Q54WI8 SMR:Q54WI8
STRING:Q54WI8 EnsemblProtists:DDB0232987 GeneID:8622140
KEGG:ddi:DDB_G0279633 ProtClustDB:CLSZ2434496 Uniprot:Q54WI8
Length = 325
Score = 94 (38.1 bits), Expect = 0.00048, P = 0.00048
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 31 VMLKIIKHCKEFSPAL---VTGQLLGLDVGSVLEVTNCFPFPEEDEEIEAD----GANYQ 83
V+L ++ H + V G LLG + V++V+NC+ P E++E + N+
Sbjct: 14 VLLSVVDHYNRVAKDTNKRVVGALLGSNNKGVVDVSNCYGLPFEEDEANPNIWFLDHNFH 73
Query: 84 LEMMRCLREVNVDNNTVGW 102
M +++N N VGW
Sbjct: 74 ENMFAMFKKINARENVVGW 92
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 102 102 0.00091 102 3 11 22 0.40 30
29 0.48 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 519 (55 KB)
Total size of DFA: 103 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.35u 0.15s 10.50t Elapsed: 00:00:01
Total cpu time: 10.36u 0.15s 10.51t Elapsed: 00:00:01
Start: Fri May 10 16:20:00 2013 End: Fri May 10 16:20:01 2013