Query 034158
Match_columns 102
No_of_seqs 114 out of 1653
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 10:24:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034158.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/034158hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02600 enoyl-CoA hydratase 99.9 1.3E-20 2.9E-25 123.6 11.6 97 1-99 154-250 (251)
2 TIGR02280 PaaB1 phenylacetate 99.8 2.4E-20 5.2E-25 122.6 11.4 97 1-99 159-255 (256)
3 PRK08139 enoyl-CoA hydratase; 99.8 2.6E-20 5.7E-25 123.1 11.5 97 1-99 169-265 (266)
4 PRK05862 enoyl-CoA hydratase; 99.8 3E-20 6.5E-25 122.2 11.4 97 1-99 160-256 (257)
5 PRK08258 enoyl-CoA hydratase; 99.8 2.8E-20 6.1E-25 123.5 11.3 97 1-99 180-276 (277)
6 PRK08140 enoyl-CoA hydratase; 99.8 3.3E-20 7.2E-25 122.3 11.4 97 1-99 165-261 (262)
7 PRK06495 enoyl-CoA hydratase; 99.8 4E-20 8.7E-25 121.6 11.4 97 1-99 160-256 (257)
8 PRK08252 enoyl-CoA hydratase; 99.8 4.5E-20 9.7E-25 121.2 11.6 97 1-99 157-253 (254)
9 PRK07658 enoyl-CoA hydratase; 99.8 4.7E-20 1E-24 121.3 11.6 97 1-99 160-256 (257)
10 PRK12478 enoyl-CoA hydratase; 99.8 3.2E-20 7E-25 124.3 10.6 98 1-100 175-281 (298)
11 PRK06127 enoyl-CoA hydratase; 99.8 5.1E-20 1.1E-24 121.9 11.4 97 1-99 172-268 (269)
12 PRK09076 enoyl-CoA hydratase; 99.8 6E-20 1.3E-24 120.9 11.6 97 1-99 161-257 (258)
13 PRK07799 enoyl-CoA hydratase; 99.8 5.9E-20 1.3E-24 121.2 11.5 97 1-99 166-262 (263)
14 PRK08150 enoyl-CoA hydratase; 99.8 6.9E-20 1.5E-24 120.4 11.6 97 1-99 158-254 (255)
15 PRK08138 enoyl-CoA hydratase; 99.8 7.3E-20 1.6E-24 120.6 11.7 97 1-99 164-260 (261)
16 PRK06563 enoyl-CoA hydratase; 99.8 6.1E-20 1.3E-24 120.6 11.3 97 1-99 158-254 (255)
17 PRK09674 enoyl-CoA hydratase-i 99.8 7.8E-20 1.7E-24 120.2 11.6 97 1-99 158-254 (255)
18 PRK05980 enoyl-CoA hydratase; 99.8 5.6E-20 1.2E-24 121.1 10.9 95 1-97 166-260 (260)
19 PRK06142 enoyl-CoA hydratase; 99.8 7.8E-20 1.7E-24 121.1 11.3 97 1-99 175-272 (272)
20 PRK05995 enoyl-CoA hydratase; 99.8 8.2E-20 1.8E-24 120.4 11.2 98 1-100 164-262 (262)
21 PRK09245 enoyl-CoA hydratase; 99.8 9.6E-20 2.1E-24 120.3 11.5 97 1-99 169-265 (266)
22 PRK05981 enoyl-CoA hydratase; 99.8 8.4E-20 1.8E-24 120.6 11.3 97 1-99 169-265 (266)
23 PRK07657 enoyl-CoA hydratase; 99.8 9.4E-20 2E-24 120.1 11.4 98 1-100 163-260 (260)
24 PRK05809 3-hydroxybutyryl-CoA 99.8 9.2E-20 2E-24 120.1 11.3 97 1-99 163-259 (260)
25 PRK06494 enoyl-CoA hydratase; 99.8 1E-19 2.2E-24 119.9 11.2 97 1-99 160-258 (259)
26 PRK07468 enoyl-CoA hydratase; 99.8 1.1E-19 2.4E-24 119.9 11.3 97 1-99 165-261 (262)
27 PLN02664 enoyl-CoA hydratase/d 99.8 1.7E-19 3.6E-24 119.7 11.3 97 1-99 177-274 (275)
28 PRK03580 carnitinyl-CoA dehydr 99.8 1.6E-19 3.4E-24 119.1 10.9 97 1-99 160-260 (261)
29 PRK07511 enoyl-CoA hydratase; 99.8 2.9E-19 6.3E-24 117.7 11.4 96 1-98 164-259 (260)
30 PRK06210 enoyl-CoA hydratase; 99.8 2.2E-19 4.7E-24 119.0 10.7 97 1-99 174-271 (272)
31 PRK06688 enoyl-CoA hydratase; 99.8 3E-19 6.4E-24 117.6 11.2 97 1-99 162-258 (259)
32 PRK07659 enoyl-CoA hydratase; 99.8 2.4E-19 5.3E-24 118.1 10.6 96 1-99 164-259 (260)
33 PRK05674 gamma-carboxygeranoyl 99.8 2.6E-19 5.7E-24 118.3 10.7 97 1-99 166-263 (265)
34 PLN02888 enoyl-CoA hydratase 99.8 4.5E-19 9.7E-24 117.2 11.6 100 1-100 165-264 (265)
35 PRK07938 enoyl-CoA hydratase; 99.8 2.7E-19 5.9E-24 117.3 10.3 93 1-95 157-249 (249)
36 KOG1680 Enoyl-CoA hydratase [L 99.8 2.7E-19 5.8E-24 116.7 9.7 97 1-99 193-289 (290)
37 PRK05864 enoyl-CoA hydratase; 99.8 5.9E-19 1.3E-23 117.2 11.3 99 1-101 176-276 (276)
38 TIGR01929 menB naphthoate synt 99.8 4.7E-19 1E-23 116.7 10.0 96 1-99 163-258 (259)
39 PRK07396 dihydroxynaphthoic ac 99.8 8.7E-19 1.9E-23 116.2 10.9 96 1-99 173-268 (273)
40 PRK11423 methylmalonyl-CoA dec 99.8 1E-18 2.2E-23 115.3 10.6 97 1-99 162-260 (261)
41 PRK08184 benzoyl-CoA-dihydrodi 99.8 5.7E-19 1.2E-23 126.0 9.5 99 1-101 447-549 (550)
42 PRK06143 enoyl-CoA hydratase; 99.8 1.5E-18 3.3E-23 114.1 10.9 92 1-94 165-256 (256)
43 PLN02921 naphthoate synthase 99.8 2.2E-18 4.9E-23 116.7 10.9 96 1-99 227-322 (327)
44 PRK06144 enoyl-CoA hydratase; 99.8 2.5E-18 5.3E-23 113.5 10.5 93 1-99 169-261 (262)
45 PLN03214 probable enoyl-CoA hy 99.8 2.3E-18 4.9E-23 114.5 10.0 95 1-97 174-268 (278)
46 PRK08259 enoyl-CoA hydratase; 99.8 4.6E-18 9.9E-23 111.8 10.9 92 1-95 159-250 (254)
47 TIGR03210 badI 2-ketocyclohexa 99.8 3.9E-18 8.4E-23 112.2 10.2 96 1-99 160-255 (256)
48 TIGR03222 benzo_boxC benzoyl-C 99.8 1.8E-18 3.9E-23 123.3 9.2 98 1-100 443-544 (546)
49 PRK08321 naphthoate synthase; 99.8 5E-18 1.1E-22 114.0 10.6 96 1-99 202-297 (302)
50 PRK07260 enoyl-CoA hydratase; 99.8 6.4E-18 1.4E-22 111.1 10.7 92 1-94 164-255 (255)
51 PRK05617 3-hydroxyisobutyryl-C 99.8 2E-18 4.4E-23 117.5 7.9 98 1-100 165-326 (342)
52 PRK08260 enoyl-CoA hydratase; 99.8 9.4E-18 2E-22 112.4 10.7 97 1-100 179-278 (296)
53 PRK07509 enoyl-CoA hydratase; 99.8 1.2E-17 2.7E-22 110.1 10.8 94 1-98 168-261 (262)
54 PRK06072 enoyl-CoA hydratase; 99.8 1.8E-17 3.9E-22 108.6 11.0 94 1-99 154-247 (248)
55 PRK07327 enoyl-CoA hydratase; 99.8 1.3E-17 2.7E-22 110.4 10.2 93 1-99 172-267 (268)
56 TIGR03189 dienoyl_CoA_hyt cycl 99.7 3E-17 6.5E-22 107.8 11.4 95 1-99 154-250 (251)
57 PRK07827 enoyl-CoA hydratase; 99.7 2.2E-17 4.8E-22 108.8 10.6 94 1-98 166-259 (260)
58 PRK09120 p-hydroxycinnamoyl Co 99.7 3.5E-17 7.6E-22 108.7 11.2 93 1-95 170-265 (275)
59 PRK07112 polyketide biosynthes 99.7 3E-17 6.5E-22 108.0 10.4 94 1-99 161-254 (255)
60 PF00378 ECH: Enoyl-CoA hydrat 99.7 1.8E-17 4E-22 108.2 8.9 90 1-92 156-245 (245)
61 PRK06023 enoyl-CoA hydratase; 99.7 6.3E-17 1.4E-21 106.2 9.9 89 1-92 163-251 (251)
62 PLN02874 3-hydroxyisobutyryl-C 99.7 2.4E-17 5.2E-22 113.6 8.2 100 1-100 170-339 (379)
63 PRK07854 enoyl-CoA hydratase; 99.7 1.1E-16 2.4E-21 104.7 10.8 91 1-99 152-242 (243)
64 PRK05870 enoyl-CoA hydratase; 99.7 1.6E-16 3.5E-21 104.2 9.4 88 1-92 161-249 (249)
65 PRK07110 polyketide biosynthes 99.7 1.3E-15 2.8E-20 99.9 10.4 87 1-89 160-246 (249)
66 COG1024 CaiD Enoyl-CoA hydrata 99.6 6.1E-15 1.3E-19 97.1 10.7 93 1-97 164-257 (257)
67 PRK06190 enoyl-CoA hydratase; 99.6 1.6E-14 3.4E-19 95.3 10.6 93 1-93 160-253 (258)
68 KOG1682 Enoyl-CoA isomerase [L 99.6 6.3E-15 1.4E-19 93.1 7.9 97 1-99 190-286 (287)
69 COG0447 MenB Dihydroxynaphthoi 99.5 1.3E-14 2.7E-19 92.4 5.9 96 1-99 182-277 (282)
70 PRK11154 fadJ multifunctional 99.5 1.2E-13 2.6E-18 101.7 10.1 92 1-94 169-295 (708)
71 PRK11730 fadB multifunctional 99.5 2.2E-13 4.7E-18 100.4 10.3 94 1-96 168-300 (715)
72 KOG0016 Enoyl-CoA hydratase/is 99.5 2.6E-13 5.6E-18 88.1 8.0 91 1-93 173-263 (266)
73 TIGR02440 FadJ fatty oxidation 99.5 3.8E-13 8.3E-18 98.9 9.8 92 1-94 164-290 (699)
74 PRK08290 enoyl-CoA hydratase; 99.5 5E-13 1.1E-17 89.4 8.3 75 1-75 182-257 (288)
75 PRK06213 enoyl-CoA hydratase; 99.4 2.5E-13 5.5E-18 88.1 5.6 70 1-70 158-227 (229)
76 PLN02157 3-hydroxyisobutyryl-C 99.4 9.1E-13 2E-17 91.5 7.9 94 1-98 198-294 (401)
77 PRK08272 enoyl-CoA hydratase; 99.4 2.6E-12 5.6E-17 86.5 9.5 57 1-57 190-246 (302)
78 PRK08788 enoyl-CoA hydratase; 99.4 9.2E-12 2E-16 83.3 9.4 90 1-92 187-276 (287)
79 KOG1679 Enoyl-CoA hydratase [L 99.3 1.8E-12 3.8E-17 82.7 5.3 97 1-99 190-290 (291)
80 PLN02988 3-hydroxyisobutyryl-C 99.3 1.9E-11 4.1E-16 84.6 10.7 101 1-101 170-340 (381)
81 PRK05869 enoyl-CoA hydratase; 99.3 9.8E-12 2.1E-16 80.5 6.4 57 1-57 165-221 (222)
82 PLN02851 3-hydroxyisobutyryl-C 99.2 1.5E-10 3.3E-15 80.6 10.7 100 1-101 203-373 (407)
83 KOG1681 Enoyl-CoA isomerase [L 99.2 1.7E-11 3.8E-16 78.8 5.6 94 1-96 193-287 (292)
84 TIGR02437 FadB fatty oxidation 99.1 7E-10 1.5E-14 82.1 9.7 92 1-94 168-298 (714)
85 TIGR02441 fa_ox_alpha_mit fatt 99.0 3.2E-09 7E-14 78.8 10.0 92 1-94 176-322 (737)
86 PLN02267 enoyl-CoA hydratase/i 98.9 2.8E-09 6E-14 69.7 5.3 56 1-56 162-220 (239)
87 PF13766 ECH_C: 2-enoyl-CoA Hy 98.9 1.9E-08 4.1E-13 59.3 7.5 72 28-101 31-104 (118)
88 KOG1684 Enoyl-CoA hydratase [L 98.8 1.2E-08 2.5E-13 69.5 6.2 99 1-101 200-369 (401)
89 TIGR03200 dearomat_oah 6-oxocy 98.6 2E-07 4.3E-12 64.1 6.6 55 1-55 190-258 (360)
90 TIGR03222 benzo_boxC benzoyl-C 98.5 9.7E-08 2.1E-12 68.9 3.6 43 1-43 190-232 (546)
91 PRK08184 benzoyl-CoA-dihydrodi 98.5 1.4E-07 3E-12 68.2 3.4 43 1-43 194-236 (550)
92 PLN02157 3-hydroxyisobutyryl-C 98.3 1.1E-05 2.3E-10 56.6 9.2 73 29-101 293-368 (401)
93 cd06558 crotonase-like Crotona 98.0 4.2E-06 9.1E-11 52.8 3.0 36 1-36 159-194 (195)
94 cd07020 Clp_protease_NfeD_1 No 97.4 7.4E-05 1.6E-09 47.3 1.7 29 1-29 143-172 (187)
95 TIGR00705 SppA_67K signal pept 95.6 0.003 6.4E-08 46.6 -0.2 40 2-45 490-530 (584)
96 PF01343 Peptidase_S49: Peptid 95.6 0.005 1.1E-07 37.7 0.8 31 2-32 119-149 (154)
97 TIGR00706 SppA_dom signal pept 95.1 0.018 3.8E-07 37.0 2.2 30 2-31 174-203 (207)
98 PRK11778 putative inner membra 93.5 0.061 1.3E-06 37.1 2.3 30 2-31 265-294 (330)
99 smart00250 PLEC Plectin repeat 93.3 0.069 1.5E-06 24.9 1.7 18 2-19 18-35 (38)
100 PF00681 Plectin: Plectin repe 92.6 0.052 1.1E-06 26.4 0.7 18 2-19 18-35 (45)
101 PRK10949 protease 4; Provision 92.6 0.098 2.1E-06 39.1 2.3 31 2-32 508-538 (618)
102 KOG0840 ATP-dependent Clp prot 90.8 0.13 2.7E-06 34.3 1.1 19 4-22 238-256 (275)
103 PRK12319 acetyl-CoA carboxylas 88.6 2 4.2E-05 28.8 5.5 19 5-23 196-214 (256)
104 CHL00198 accA acetyl-CoA carbo 87.1 2.8 6.1E-05 29.1 5.6 20 4-23 251-270 (322)
105 PLN03230 acetyl-coenzyme A car 86.6 2.9 6.3E-05 30.1 5.6 19 5-23 319-337 (431)
106 TIGR00513 accA acetyl-CoA carb 85.7 3.6 7.9E-05 28.5 5.6 19 5-23 249-267 (316)
107 PRK05724 acetyl-CoA carboxylas 83.3 5.4 0.00012 27.7 5.6 19 5-23 249-267 (319)
108 COG0616 SppA Periplasmic serin 82.1 1 2.2E-05 31.0 1.8 29 2-30 241-269 (317)
109 TIGR03200 dearomat_oah 6-oxocy 81.8 4.9 0.00011 28.3 5.0 66 24-92 263-328 (360)
110 PRK05654 acetyl-CoA carboxylas 81.4 2.2 4.8E-05 29.1 3.2 36 7-42 250-285 (292)
111 TIGR00515 accD acetyl-CoA carb 80.7 2.8 6E-05 28.6 3.5 34 7-40 249-282 (285)
112 COG0825 AccA Acetyl-CoA carbox 77.0 10 0.00022 26.1 5.2 20 4-23 247-266 (317)
113 PLN03229 acetyl-coenzyme A car 75.4 11 0.00025 29.1 5.6 20 4-23 339-358 (762)
114 PRK10949 protease 4; Provision 73.8 3.1 6.6E-05 31.4 2.4 29 5-33 270-298 (618)
115 TIGR00705 SppA_67K signal pept 73.6 3 6.5E-05 31.2 2.3 28 6-33 252-279 (584)
116 TIGR03134 malonate_gamma malon 68.5 6.4 0.00014 26.1 2.8 20 6-25 172-191 (238)
117 COG0777 AccD Acetyl-CoA carbox 67.6 6.1 0.00013 26.9 2.5 36 7-42 251-286 (294)
118 CHL00174 accD acetyl-CoA carbo 59.3 13 0.00029 25.5 3.0 31 7-37 263-293 (296)
119 TIGR01117 mmdA methylmalonyl-C 56.1 18 0.0004 26.7 3.5 34 6-39 464-497 (512)
120 PF11524 SeleniumBinding: Sele 53.8 9.5 0.00021 20.7 1.3 33 2-34 11-44 (81)
121 COG1725 Predicted transcriptio 49.0 15 0.00032 22.0 1.7 47 10-56 18-64 (125)
122 PF08406 CbbQ_C: CbbQ/NirQ/Nor 47.9 19 0.00042 19.9 2.0 25 6-30 54-78 (86)
123 PRK02261 methylaspartate mutas 47.3 29 0.00064 20.8 2.9 27 9-36 106-132 (137)
124 COG4565 CitB Response regulato 44.5 31 0.00067 22.8 2.8 30 7-36 88-120 (224)
125 COG4567 Response regulator con 44.1 35 0.00076 21.5 2.9 31 5-35 93-123 (182)
126 KOG0033 Ca2+/calmodulin-depend 42.7 68 0.0015 22.1 4.3 36 24-59 237-272 (355)
127 PF09425 CCT_2: Divergent CCT 41.7 21 0.00045 15.4 1.2 15 83-97 5-19 (27)
128 TIGR01501 MthylAspMutase methy 35.8 51 0.0011 19.9 2.7 25 10-35 105-129 (134)
129 KOG1683 Hydroxyacyl-CoA dehydr 35.5 23 0.00049 25.3 1.3 32 3-34 220-253 (380)
130 PF13395 HNH_4: HNH endonuclea 33.8 27 0.00058 17.3 1.1 24 1-24 3-27 (54)
131 PF01972 SDH_sah: Serine dehyd 33.8 26 0.00055 24.0 1.3 21 2-22 227-248 (285)
132 PRK12555 chemotaxis-specific m 32.3 36 0.00078 23.3 1.9 23 8-30 310-332 (337)
133 TIGR03133 malonate_beta malona 30.5 1.4E+02 0.0031 20.3 4.4 20 5-24 199-218 (274)
134 PRK13848 conjugal transfer pro 30.4 93 0.002 17.7 2.9 31 9-39 32-62 (98)
135 PF07820 TraC: TraC-like prote 30.4 95 0.0021 17.6 3.0 32 9-40 31-62 (92)
136 PF13963 Transpos_assoc: Trans 30.1 59 0.0013 17.4 2.1 14 78-91 13-26 (77)
137 PF05195 AMP_N: Aminopeptidase 29.4 57 0.0012 19.4 2.2 33 2-34 85-117 (134)
138 COG3454 Metal-dependent hydrol 29.4 1.1E+02 0.0023 21.8 3.7 36 4-39 282-320 (377)
139 PF12354 Internalin_N: Bacteri 28.8 30 0.00065 17.7 0.8 12 17-28 42-53 (57)
140 COG2201 CheB Chemotaxis respon 28.6 60 0.0013 23.0 2.4 27 8-34 317-343 (350)
141 PF01407 Gemini_AL3: Geminivir 28.1 28 0.00061 20.7 0.6 20 2-21 4-23 (120)
142 PRK00742 chemotaxis-specific m 26.7 74 0.0016 21.9 2.6 25 8-32 324-348 (354)
143 PF11007 CotJA: Spore coat ass 26.2 62 0.0013 14.9 1.5 15 3-17 14-28 (36)
144 PF00191 Annexin: Annexin; In 25.3 1E+02 0.0022 15.4 5.5 36 33-68 20-55 (66)
145 PLN02820 3-methylcrotonyl-CoA 23.3 1.2E+02 0.0026 23.0 3.3 33 7-39 524-556 (569)
146 COG4753 Response regulator con 21.7 1.3E+02 0.0029 22.3 3.2 33 8-40 91-126 (475)
147 smart00545 JmjN Small domain f 21.6 71 0.0015 15.2 1.3 14 10-24 25-38 (42)
148 COG1030 NfeD Membrane-bound se 21.5 68 0.0015 23.5 1.7 20 4-23 169-188 (436)
No 1
>PLN02600 enoyl-CoA hydratase
Probab=99.85 E-value=1.3e-20 Score=123.58 Aligned_cols=97 Identities=25% Similarity=0.359 Sum_probs=92.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||++++++.+.+++++|+..||.++..+|+.++.....++.+.+..|...+..++. ++
T Consensus 154 ltg~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 231 (251)
T PLN02600 154 FTGRRIGAREAASMGLVNYCVPAGEAYEKALELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLK--TK 231 (251)
T ss_pred HhCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhC--CH
Confidence 5899999999999999999999999999999999999999999999999999988878899999999999988884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 232 d~~eg~~af~ekr~p~~~~ 250 (251)
T PLN02600 232 DRLEGLAAFAEKRKPVYTG 250 (251)
T ss_pred HHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 2
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=99.85 E-value=2.4e-20 Score=122.64 Aligned_cols=97 Identities=20% Similarity=0.321 Sum_probs=92.0
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.++++.|+..||.++..+|+.++.....++.+++..|...+..++. ++
T Consensus 159 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 236 (256)
T TIGR02280 159 MLGEKLDARTAASWGLIWQVVDDAALMDEAQALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGR--SA 236 (256)
T ss_pred HcCCCCCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999999999999999999999999999999999999988888899999999999988884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 237 d~~eg~~af~~kr~p~~~~ 255 (256)
T TIGR02280 237 DYAEGVTAFLDKRNPQFTG 255 (256)
T ss_pred hHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999975
No 3
>PRK08139 enoyl-CoA hydratase; Validated
Probab=99.85 E-value=2.6e-20 Score=123.07 Aligned_cols=97 Identities=19% Similarity=0.247 Sum_probs=91.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++.+.+.+++++|+..||.++..+|++++.....++.+.+..|...+...+. ++
T Consensus 169 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 246 (266)
T PRK08139 169 LTGEFIDAATAREWGLVNRVVPADALDAAVARLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMM--AE 246 (266)
T ss_pred HcCCccCHHHHHHcCCccEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc--Cc
Confidence 5899999999999999999999999999999999999999999999999999998888899999999998888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 247 d~~eg~~af~~kr~p~~~~ 265 (266)
T PRK08139 247 DAEEGIDAFLEKRPPEWRG 265 (266)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 4
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=3e-20 Score=122.24 Aligned_cols=97 Identities=26% Similarity=0.356 Sum_probs=92.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.+++++++..||.++..+|++++.....++.+++..|...+..++. ++
T Consensus 160 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--s~ 237 (257)
T PRK05862 160 LTGRMMDAAEAERAGLVSRVVPADKLLDEALAAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFA--TE 237 (257)
T ss_pred HhCCccCHHHHHHcCCCCEeeCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999999999999999999999999999999999999998888999999999999988884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 238 ~~~e~i~af~~kr~p~~~~ 256 (257)
T PRK05862 238 DQKEGMAAFVEKRKPVFKH 256 (257)
T ss_pred hHHHHHHHHhccCCCCCCC
Confidence 9999999999999999975
No 5
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=2.8e-20 Score=123.51 Aligned_cols=97 Identities=25% Similarity=0.366 Sum_probs=92.0
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||.+++++.+.+++.+|+..||.++..+|++++.....++.+.+..|...+..++. ++
T Consensus 180 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--s~ 257 (277)
T PRK08258 180 YTGRSMSAEEGERWGFFNRLVEPEELLAEAQALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQ--TE 257 (277)
T ss_pred HcCCCCCHHHHHHcCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhc--Cc
Confidence 5899999999999999999999999999999999999999999999999999998888899999999999988884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
|+++++.+|++|++|+|.+
T Consensus 258 d~~eg~~af~ekr~p~~~~ 276 (277)
T PRK08258 258 DFRRAYEAFVAKRKPVFEG 276 (277)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 6
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=3.3e-20 Score=122.29 Aligned_cols=97 Identities=21% Similarity=0.349 Sum_probs=91.6
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.++++.|+..||.++..+|+.++.....++.+++..|...+..++. ++
T Consensus 165 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 242 (262)
T PRK08140 165 LLGEKLSAEQAEQWGLIWRVVDDAALADEAQQLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGR--SA 242 (262)
T ss_pred HcCCCcCHHHHHHcCCccEeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999999999999999999999999999999999999988878899999999998888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 243 ~~~e~~~af~~kr~p~~~~ 261 (262)
T PRK08140 243 DYAEGVSAFLEKRAPRFTG 261 (262)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 7
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=4e-20 Score=121.63 Aligned_cols=97 Identities=14% Similarity=0.185 Sum_probs=91.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|++|+++|||++|||++++.+.+.++++.|+..||.++..+|+.++.....++.+++..|...+...+. ++
T Consensus 160 l~g~~~~a~eA~~~GLv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--s~ 237 (257)
T PRK06495 160 LTGYRVPAAELYRRGVIEACLPPEELMPEAMEIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK--TE 237 (257)
T ss_pred HcCCeeCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999999999999999999999999999999999999988778899999999998888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 238 d~~egi~af~~kr~p~~~~ 256 (257)
T PRK06495 238 DAKEAQRAFLEKRPPVFKG 256 (257)
T ss_pred HHHHHHHHHhccCCCCCCC
Confidence 9999999999999999975
No 8
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=4.5e-20 Score=121.25 Aligned_cols=97 Identities=21% Similarity=0.265 Sum_probs=91.4
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.+++++++..||.++..+|++++.....++.+.++.|...+..++. ++
T Consensus 157 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--~~ 234 (254)
T PRK08252 157 LTGDMLTAERAHELGLVNRLTEPGQALDAALELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFT--SA 234 (254)
T ss_pred HcCCccCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc--Cc
Confidence 5899999999999999999999999999999999999999999999999999988777899999999998888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 235 ~~~eg~~af~~kr~p~~~~ 253 (254)
T PRK08252 235 DAKEGATAFAEKRAPVWTG 253 (254)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 9
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=4.7e-20 Score=121.26 Aligned_cols=97 Identities=19% Similarity=0.308 Sum_probs=91.9
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++.+.+.++++.|+..||.++..+|++++.....++.+.++.|...+..++. ++
T Consensus 160 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 237 (257)
T PRK07658 160 LTSEPITGAEALKWGLVNGVFPEETLLDDAKKLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFT--SE 237 (257)
T ss_pred HcCCCcCHHHHHHcCCcCeecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC--CH
Confidence 5899999999999999999999999999999999999999999999999999988777899999999999998884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 238 ~~~egi~af~~kr~p~~~~ 256 (257)
T PRK07658 238 DAKEGVQAFLEKRKPSFSG 256 (257)
T ss_pred HHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999975
No 10
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=3.2e-20 Score=124.34 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=90.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhc-CCHHHHHHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLK-LDLGHALALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~ 79 (102)
+||++|+|+||+++|||++|||++++++.+.+++++|+..||.++..+|++++.... .++++++..|...+..++. +
T Consensus 175 ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~~e~~~~~~~~~--s 252 (298)
T PRK12478 175 LTGRPLTGVQAAEAELINEAVPFERLEARVAEVATELARIPLSQLQAQKLIVNQAYENMGLASTQTLGGILDGLMRN--T 252 (298)
T ss_pred HcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhc--C
Confidence 589999999999999999999999999999999999999999999999999998766 4689999999999988874 9
Q ss_pred hhHH--------HHHHHHHhhcCCCCCCC
Q 034158 80 KEQF--------KKMQEFIAARSSKKPSS 100 (102)
Q Consensus 80 ~~~~--------~~i~~fl~k~~~~~~~~ 100 (102)
+|++ +++.+|++||+|.|.+.
T Consensus 253 ~d~~e~~~~~~~egv~Af~ekR~p~f~~~ 281 (298)
T PRK12478 253 PDALEFIRTAETQGVRAAVERRDGPFGDY 281 (298)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 9997 59999999999999763
No 11
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=5.1e-20 Score=121.87 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=91.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++|||++|||.+++++.+.+++++++..||.++..+|+.++.....++...+..|...+..++. ++
T Consensus 172 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 249 (269)
T PRK06127 172 YTARRFDAAEALRIGLVHRVTAADDLETALADYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACFD--SE 249 (269)
T ss_pred HcCCCCCHHHHHHcCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999999999999999999999999999999999999998888899999999998888884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 250 d~~e~~~af~ekr~p~~~~ 268 (269)
T PRK06127 250 DYREGRAAFMEKRKPVFKG 268 (269)
T ss_pred HHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 12
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=6e-20 Score=120.88 Aligned_cols=97 Identities=28% Similarity=0.352 Sum_probs=91.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++|||++|||.+++++.+.+++++|+..||.++..+|++++.....++.+.+..|...+..++ .++
T Consensus 161 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~--~~~ 238 (258)
T PRK09076 161 LCGERVDAATALRIGLVEEVVEKGEAREAALALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLF--DTE 238 (258)
T ss_pred HcCCcCCHHHHHHCCCCceecCchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh--cCc
Confidence 589999999999999999999999999999999999999999999999999998877789999999999998887 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 239 ~~~eg~~af~~kr~p~~~~ 257 (258)
T PRK09076 239 DQREGVNAFLEKRAPQWKN 257 (258)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 13
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=5.9e-20 Score=121.19 Aligned_cols=97 Identities=21% Similarity=0.281 Sum_probs=91.6
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||++++++.+.+++++++..||.++..+|+.++.....++.+++..|...+..++. ++
T Consensus 166 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--~~ 243 (263)
T PRK07799 166 LTGRHITAAEAKEIGLIGHVVPDGQALDKALELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVFL--SE 243 (263)
T ss_pred HcCCCCCHHHHHHcCCccEecCcchHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc--Cc
Confidence 5899999999999999999999999999999999999999999999999999988778899999999998888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|+++++|+|.+
T Consensus 244 ~~~egi~af~~~r~p~~~~ 262 (263)
T PRK07799 244 DAKEGPRAFAEKRAPNFQG 262 (263)
T ss_pred cHHHHHHHHHccCCCCCCC
Confidence 9999999999999999975
No 14
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=6.9e-20 Score=120.43 Aligned_cols=97 Identities=21% Similarity=0.254 Sum_probs=90.6
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||.+++.+.+.+++++|+..||.++..+|+.++.....+++..+..|...+...+ .++
T Consensus 158 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~--~s~ 235 (255)
T PRK08150 158 LTGRVYDAQEGERLGLAQYLVPAGEALDKAMELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQ--SAP 235 (255)
T ss_pred HcCCcCCHHHHHHcCCccEeeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh--cCH
Confidence 589999999999999999999999999999999999999999999999999998877889999999988877776 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 236 d~~eg~~af~~kr~p~~~~ 254 (255)
T PRK08150 236 EAKERLRAFLEKKAAKVKP 254 (255)
T ss_pred HHHHHHHHHhccCCCCCCC
Confidence 9999999999999999965
No 15
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=7.3e-20 Score=120.64 Aligned_cols=97 Identities=24% Similarity=0.335 Sum_probs=91.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++...+.+++++++..||.++..+|++++.....++.+++..|...+..++. ++
T Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 241 (261)
T PRK08138 164 LTGCMVPAPEALAIGLVSEVVEDEQTLPRALELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD--SE 241 (261)
T ss_pred HcCCCCCHHHHHHCCCCcEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc--CH
Confidence 5899999999999999999999999999999999999999999999999999988878899999999999988884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 242 ~~~~~i~af~~kr~~~~~~ 260 (261)
T PRK08138 242 DQKEGMDAFLEKRKPAYKG 260 (261)
T ss_pred HHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999965
No 16
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=99.84 E-value=6.1e-20 Score=120.63 Aligned_cols=97 Identities=21% Similarity=0.251 Sum_probs=91.6
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||++++.+.+.+++++|+..||.++..+|++++.....++.++++.|...+..++. ++
T Consensus 158 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~ 235 (255)
T PRK06563 158 LTGDEFDAQEALRLGLVQEVVPPGEQLERAIELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFT--SE 235 (255)
T ss_pred HcCCCcCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc--Cc
Confidence 5899999999999999999999999999999999999999999999999999988778899999999998888884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 236 d~~eg~~af~~kr~p~~~~ 254 (255)
T PRK06563 236 DAKEGVQAFLERRPARFKG 254 (255)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 17
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=99.84 E-value=7.8e-20 Score=120.17 Aligned_cols=97 Identities=21% Similarity=0.283 Sum_probs=91.9
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.+++++|+..||.++..+|+.++.....++.+.+..|...+..++. ++
T Consensus 158 l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 235 (255)
T PRK09674 158 LTGESITAQQAQQAGLVSEVFPPELTLERALQLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAA--TE 235 (255)
T ss_pred HcCCccCHHHHHHcCCCcEecChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc--CH
Confidence 5899999999999999999999999999999999999999999999999999988888899999999999888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 236 ~~~e~i~af~~kr~p~~~~ 254 (255)
T PRK09674 236 DRHEGISAFLEKRTPDFKG 254 (255)
T ss_pred HHHHHHHHHhccCCCCCCC
Confidence 9999999999999999975
No 18
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=99.83 E-value=5.6e-20 Score=121.08 Aligned_cols=95 Identities=25% Similarity=0.364 Sum_probs=90.4
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.+++++++..||.++..+|+.++.....++.+++..|...+...+. ++
T Consensus 166 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~ 243 (260)
T PRK05980 166 LTGDAFSAERALEIGLVNAVVPHEELLPAARALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAG--SA 243 (260)
T ss_pred HcCCccCHHHHHHcCCCCcccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999999999999999999999999999999999999988888899999999999988884 99
Q ss_pred hHHHHHHHHHhhcCCCC
Q 034158 81 EQFKKMQEFIAARSSKK 97 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~ 97 (102)
++++++.+|++|++|+|
T Consensus 244 ~~~e~~~af~~kr~p~~ 260 (260)
T PRK05980 244 DLREGLAAWIERRRPAY 260 (260)
T ss_pred hHHHHHHHHhccCCCCC
Confidence 99999999999999987
No 19
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=99.83 E-value=7.8e-20 Score=121.10 Aligned_cols=97 Identities=21% Similarity=0.253 Sum_probs=90.7
Q ss_pred CCCcccCHHHHHhccccceecCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEE-GELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~ 79 (102)
++|++++|+||+++||||+|||+ +++++.+.+++++|+..||.++..+|+.++.....++.+++..|...+..++. +
T Consensus 175 l~g~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~~~~~~~--~ 252 (272)
T PRK06142 175 LTGRDIDAAEAEKIGLVNRVYDDADALLAAAHATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATWNAAMLP--S 252 (272)
T ss_pred HhCCCcCHHHHHHcCCccEecCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhc--C
Confidence 58999999999999999999996 78999999999999999999999999999988777899999999998888874 9
Q ss_pred hhHHHHHHHHHhhcCCCCCC
Q 034158 80 KEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 80 ~~~~~~i~~fl~k~~~~~~~ 99 (102)
+++++++.+|++|++|+|.+
T Consensus 253 ~d~~egv~af~~kr~p~~~~ 272 (272)
T PRK06142 253 KDLTEAIAAHMEKRPPEFTG 272 (272)
T ss_pred ccHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999964
No 20
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=99.83 E-value=8.2e-20 Score=120.43 Aligned_cols=98 Identities=22% Similarity=0.228 Sum_probs=90.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHH-HHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHA-LALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~-~~~e~~~~~~~~~~~~ 79 (102)
++|++|+|+||+++||||+|||.+++.+.+.+++++|+..||.++..+|+.++.....++.+. +..|...+...+. +
T Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~--~ 241 (262)
T PRK05995 164 LTAERFDAAEALRLGLVHEVVPAEALDAKVDELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA--T 241 (262)
T ss_pred HcCCccCHHHHHHcCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc--C
Confidence 589999999999999999999999999999999999999999999999999998877788888 7888888877774 9
Q ss_pred hhHHHHHHHHHhhcCCCCCCC
Q 034158 80 KEQFKKMQEFIAARSSKKPSS 100 (102)
Q Consensus 80 ~~~~~~i~~fl~k~~~~~~~~ 100 (102)
+++++++.+|++|++|+|.++
T Consensus 242 ~d~~e~~~af~~kr~p~~~~~ 262 (262)
T PRK05995 242 EEAREGVAAFLEKRKPAWRGR 262 (262)
T ss_pred HHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999999999753
No 21
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=99.83 E-value=9.6e-20 Score=120.33 Aligned_cols=97 Identities=24% Similarity=0.321 Sum_probs=91.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||.+++++.+.+++++|+..||.++..+|++++.....++++.+..|...+..++ .++
T Consensus 169 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~--~~~ 246 (266)
T PRK09245 169 FTGDAIDAATALEWGLVSRVVPADQLLPAARALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQALAH--HTA 246 (266)
T ss_pred HcCCCcCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh--cCH
Confidence 589999999999999999999999999999999999999999999999999998877789999999998888887 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
|+++++.+|++|++|.|.+
T Consensus 247 d~~eg~~af~~kr~p~~~~ 265 (266)
T PRK09245 247 DHREAVDAFLEKRPPVFTG 265 (266)
T ss_pred hHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999975
No 22
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=99.83 E-value=8.4e-20 Score=120.59 Aligned_cols=97 Identities=23% Similarity=0.323 Sum_probs=91.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.++++.++..||.++..+|++++.....++.+.+..|...+...+. ++
T Consensus 169 l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~--s~ 246 (266)
T PRK05981 169 LLGEKLPAETALQWGLVNRVVDDAELMAEAMKLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIAGK--TE 246 (266)
T ss_pred HhCCCcCHHHHHHcCCceEeeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999999999999999999999999999999999999988777899999999998888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
|+++++.+|++|++|+|.+
T Consensus 247 d~~e~~~af~~kr~~~~~~ 265 (266)
T PRK05981 247 DFKEGVGAFLQKRPAQFKG 265 (266)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 23
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=99.83 E-value=9.4e-20 Score=120.05 Aligned_cols=98 Identities=28% Similarity=0.368 Sum_probs=92.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.+++++++..||.++..+|+.++.....++.+.+..|...+...+. ++
T Consensus 163 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 240 (260)
T PRK07657 163 YTGRRISAQEAKEIGLVEFVVPAHLLEEKAIEIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP--TK 240 (260)
T ss_pred HhCCCCCHHHHHHcCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc--CH
Confidence 5899999999999999999999999999999999999999999999999999988878899999999999988884 99
Q ss_pred hHHHHHHHHHhhcCCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPSS 100 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~~ 100 (102)
++++++.+|+++++|.|.++
T Consensus 241 ~~~e~~~af~~~r~~~~~~~ 260 (260)
T PRK07657 241 DRLEGLQAFKEKRKPMYKGE 260 (260)
T ss_pred hHHHHHHHHhcCCCCCCCCC
Confidence 99999999999999999753
No 24
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=99.83 E-value=9.2e-20 Score=120.06 Aligned_cols=97 Identities=32% Similarity=0.455 Sum_probs=92.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|+|++++++.+.++++.|+..||.++..+|+.++.....++.++++.|...+..++. ++
T Consensus 163 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 240 (260)
T PRK05809 163 YTGDMINAEEALRIGLVNKVVEPEKLMEEAKALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS--TE 240 (260)
T ss_pred HhCCCCCHHHHHHcCCCCcccChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc--CH
Confidence 5899999999999999999999999999999999999999999999999999998888899999999999998884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 241 ~~~egi~af~~~r~p~~~~ 259 (260)
T PRK05809 241 DQTEGMTAFVEKREKNFKN 259 (260)
T ss_pred HHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 25
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=99.83 E-value=1e-19 Score=119.88 Aligned_cols=97 Identities=22% Similarity=0.319 Sum_probs=89.0
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHH--HHHHhHHhhcC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALE--KERAHDYYNGM 78 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e--~~~~~~~~~~~ 78 (102)
++|++++|+||+++||||+|||++++++.+.+++++|+..||.++..+|++++.....++.+.+..| ...+..++ .
T Consensus 160 l~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~--~ 237 (259)
T PRK06494 160 LTGRRVTAREGLELGFVNEVVPAGELLAAAERWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEARR--A 237 (259)
T ss_pred HcCCcCCHHHHHHcCCCcEecCHhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHh--c
Confidence 5899999999999999999999999999999999999999999999999999988777899999988 44566666 4
Q ss_pred ChhHHHHHHHHHhhcCCCCCC
Q 034158 79 TKEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 79 ~~~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++++.+|++|++|+|.+
T Consensus 238 ~~d~~eg~~af~~kr~p~~~~ 258 (259)
T PRK06494 238 SQDYIEGPKAFAEKRPPRWKG 258 (259)
T ss_pred CccHHHHHHHHHccCCCCCCC
Confidence 999999999999999999975
No 26
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=99.83 E-value=1.1e-19 Score=119.85 Aligned_cols=97 Identities=21% Similarity=0.169 Sum_probs=90.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||.+++.+.+.++++++++.||.++..+|++++......+...++.|...+...+. ++
T Consensus 165 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--s~ 242 (262)
T PRK07468 165 MSARLFDAEEAVRLGLLSRVVPAERLDAAVEAEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE--TE 242 (262)
T ss_pred HhCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc--CH
Confidence 5899999999999999999999999999999999999999999999999999987666678899999998888884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 243 d~~e~~~af~~kr~~~~~~ 261 (262)
T PRK07468 243 EAREGIAAFFDKRAPAWRG 261 (262)
T ss_pred HHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999975
No 27
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=99.82 E-value=1.7e-19 Score=119.72 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=90.2
Q ss_pred CCCcccCHHHHHhccccceecCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEE-GELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~ 79 (102)
+||++++|+||+++||||+|||+ +++.+.+.++++.|+..||.++..+|++++.....++.+++..|...+...+ .+
T Consensus 177 ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~~~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~--~~ 254 (275)
T PLN02664 177 LTGRRFSGSEAKELGLVSRVFGSKEDLDEGVRLIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWNSAML--VS 254 (275)
T ss_pred HhCCCCCHHHHHHcCCCceeeCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc--cC
Confidence 58999999999999999999995 8899999999999999999999999999998877789999999998888777 49
Q ss_pred hhHHHHHHHHHhhcCCCCCC
Q 034158 80 KEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 80 ~~~~~~i~~fl~k~~~~~~~ 99 (102)
+++++++.+|++|++|.|..
T Consensus 255 ~d~~eg~~af~ekr~p~~~~ 274 (275)
T PLN02664 255 DDLNEAVSAQIQKRKPVFAK 274 (275)
T ss_pred hhHHHHHHHHhccCCCCCCC
Confidence 99999999999999999975
No 28
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=99.82 E-value=1.6e-19 Score=119.08 Aligned_cols=97 Identities=19% Similarity=0.353 Sum_probs=88.9
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHH----HHhHHhh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKE----RAHDYYN 76 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~----~~~~~~~ 76 (102)
++|++++|+||+++||||+|||++++++.+.+++++|+..||.++..+|++++.....++.+.+..|.. .+..++
T Consensus 160 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~- 238 (261)
T PRK03580 160 MTGRRMDAEEALRWGIVNRVVPQAELMDRARELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPSVL- 238 (261)
T ss_pred HhCCccCHHHHHHcCCCcEecCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHh-
Confidence 589999999999999999999999999999999999999999999999999998877888888888863 566666
Q ss_pred cCChhHHHHHHHHHhhcCCCCCC
Q 034158 77 GMTKEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 77 ~~~~~~~~~i~~fl~k~~~~~~~ 99 (102)
.++++++++.+|++|++|.|.+
T Consensus 239 -~~~d~~e~~~af~ekr~~~~~~ 260 (261)
T PRK03580 239 -HSEDALEGPRAFAEKRDPVWKG 260 (261)
T ss_pred -cCccHHHHHHHHhcCCCCCCCC
Confidence 4999999999999999999975
No 29
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=99.82 E-value=2.9e-19 Score=117.70 Aligned_cols=96 Identities=23% Similarity=0.392 Sum_probs=91.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||.+++.+.+.+++++++..||.++..+|+.++.....++.+++..|...+..++. +|
T Consensus 164 ltg~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 241 (260)
T PRK07511 164 LEGKPISAERLHALGVVNRLAEPGQALAEALALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLH--HA 241 (260)
T ss_pred HhCCCCCHHHHHHcCCccEeeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc--Cc
Confidence 5899999999999999999999999999999999999999999999999999988888899999999999998884 99
Q ss_pred hHHHHHHHHHhhcCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKP 98 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~ 98 (102)
++++++.+|+++++|.|.
T Consensus 242 ~~~~~i~~f~~~r~~~~~ 259 (260)
T PRK07511 242 DALEGIAAFLEKRAPDYK 259 (260)
T ss_pred hHHHHHHHHhccCCCCCC
Confidence 999999999999999995
No 30
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=99.82 E-value=2.2e-19 Score=118.98 Aligned_cols=97 Identities=25% Similarity=0.351 Sum_probs=90.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKN-NQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~-~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~ 79 (102)
+||++++|++|+++||||+|||++++.+.+.+++++|+.. +|.++..+|+.++.....++.+.++.|...+...+. +
T Consensus 174 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--~ 251 (272)
T PRK06210 174 LSARTFYAEEALRLGLVNRVVPPDELMERTLAYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANREMHESLQ--R 251 (272)
T ss_pred HcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHhc--C
Confidence 5899999999999999999999999999999999999985 999999999999988778899999999998888874 9
Q ss_pred hhHHHHHHHHHhhcCCCCCC
Q 034158 80 KEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 80 ~~~~~~i~~fl~k~~~~~~~ 99 (102)
+++++++.+|++|++|.|.+
T Consensus 252 ~~~~egi~af~~kr~p~~~~ 271 (272)
T PRK06210 252 PDFIEGVASFLEKRPPRFPG 271 (272)
T ss_pred ccHHHHHHHHhccCCCCCCC
Confidence 99999999999999999964
No 31
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=99.82 E-value=3e-19 Score=117.56 Aligned_cols=97 Identities=28% Similarity=0.286 Sum_probs=91.9
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|+|++++++.+.++++.|+..||.++..+|+.++.....++++++..|...+..++. ++
T Consensus 162 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 239 (259)
T PRK06688 162 LLGEPLSAEEALRIGLVNRVVPAAELDAEADAQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLR--TP 239 (259)
T ss_pred HhCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhC--CH
Confidence 5899999999999999999999999999999999999999999999999999998888899999999999988884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++++|+++++|+|.+
T Consensus 240 ~~~~~~~af~~~~~p~~~~ 258 (259)
T PRK06688 240 DFREGATAFIEKRKPDFTG 258 (259)
T ss_pred HHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999964
No 32
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=99.82 E-value=2.4e-19 Score=118.12 Aligned_cols=96 Identities=16% Similarity=0.241 Sum_probs=90.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|| ++++.+.+.+++++|++.||.++..+|+.++.....++.+.+..|...+..++. ++
T Consensus 164 ltg~~~~a~eA~~~Glv~~vv-~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--~~ 240 (260)
T PRK07659 164 WEGKKLSATEALDLGLIDEVI-GGDFQTAAKQKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQ--TA 240 (260)
T ss_pred HhCCccCHHHHHHcCChHHHh-hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc--CH
Confidence 589999999999999999999 778999999999999999999999999999988788899999999999888884 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 241 ~~~egi~af~~kr~p~~~~ 259 (260)
T PRK07659 241 DHKEGIRAFLEKRLPVFKG 259 (260)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 33
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=99.82 E-value=2.6e-19 Score=118.26 Aligned_cols=97 Identities=14% Similarity=0.181 Sum_probs=87.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHH-HHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALAL-EKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~-e~~~~~~~~~~~~ 79 (102)
+||+.++|+||+++|||++|||.+++.+.+.+++.+|+..||.++..+|+.++.....++.+.+.. +...+..++ .+
T Consensus 166 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~--~s 243 (265)
T PRK05674 166 LTAERFDGRRARELGLLAESYPAAELEAQVEAWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIR--VS 243 (265)
T ss_pred HhCcccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHh--cC
Confidence 589999999999999999999999999999999999999999999999999999887788887765 345566666 49
Q ss_pred hhHHHHHHHHHhhcCCCCCC
Q 034158 80 KEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 80 ~~~~~~i~~fl~k~~~~~~~ 99 (102)
+++++++.+|++|++|+|..
T Consensus 244 ~d~~e~~~af~~kr~p~~~~ 263 (265)
T PRK05674 244 AEGQEGLRAFLEKRTPAWQT 263 (265)
T ss_pred HHHHHHHHHHHccCCCCCCC
Confidence 99999999999999999975
No 34
>PLN02888 enoyl-CoA hydratase
Probab=99.81 E-value=4.5e-19 Score=117.17 Aligned_cols=100 Identities=83% Similarity=1.207 Sum_probs=90.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||++++.+.+.+++++|+..+|.++..+|++++.....++++++..|...+..++...++
T Consensus 165 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 244 (265)
T PLN02888 165 LTAMPLTAETAERWGLVNHVVEESELLKKAREVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDYYNGMTK 244 (265)
T ss_pred HhCCccCHHHHHHcCCccEeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhccCCH
Confidence 58999999999999999999999999999999999999999999999999999888788999999998877776522489
Q ss_pred hHHHHHHHHHhhcCCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPSS 100 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~~ 100 (102)
++++++.+|++|++|+..++
T Consensus 245 d~~e~~~af~ekr~~~~~~~ 264 (265)
T PLN02888 245 EQFQKMQEFIAGRSSKKPSK 264 (265)
T ss_pred HHHHHHHHHHhcCCCCCCCC
Confidence 99999999999998876553
No 35
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=99.81 E-value=2.7e-19 Score=117.27 Aligned_cols=93 Identities=19% Similarity=0.238 Sum_probs=86.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++|||++|||++++++.+.+++++|+..||.++..+|+.++.....++++.+..|...+..++ .++
T Consensus 157 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~--~~~ 234 (249)
T PRK07938 157 FTAATITAAELHHFGSVEEVVPRDQLDEAALEVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELN--LAG 234 (249)
T ss_pred HhCCcCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHh--cCc
Confidence 589999999999999999999999999999999999999999999999999998877788999999988887777 499
Q ss_pred hHHHHHHHHHhhcCC
Q 034158 81 EQFKKMQEFIAARSS 95 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~ 95 (102)
++++++.+|++|++|
T Consensus 235 d~~eg~~af~ekr~p 249 (249)
T PRK07938 235 VSDEHRDAFVEKRKA 249 (249)
T ss_pred cHHHHHHHHHhcCCC
Confidence 999999999999875
No 36
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=99.81 E-value=2.7e-19 Score=116.69 Aligned_cols=97 Identities=27% Similarity=0.384 Sum_probs=93.0
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||.++|||++|||.++++..|.+|+..|+++||.++...|+.++...+.++.+.+..|...+...+ ..+
T Consensus 193 ltg~~~~AqeA~~~GlVn~Vvp~~~~l~eAv~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~--~~~ 270 (290)
T KOG1680|consen 193 LTGRRLGAQEAKKIGLVNKVVPSGDALGEAVKLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTF--ATE 270 (290)
T ss_pred HhcCcccHHHHHhCCceeEeecchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhh--hhH
Confidence 589999999999999999999999999999999999999999999999999999999999999999999998888 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
+.+++|.+|.+|++|+|..
T Consensus 271 d~~Eg~~~f~~kr~~~~~k 289 (290)
T KOG1680|consen 271 DRLEGMTAFAEKRKPKFSK 289 (290)
T ss_pred HHHHHHHHhcccCCccccc
Confidence 9999999999999999975
No 37
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=99.81 E-value=5.9e-19 Score=117.18 Aligned_cols=99 Identities=21% Similarity=0.197 Sum_probs=86.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcC-CHHHHHHHHHHHHh-HHhhcC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKL-DLGHALALEKERAH-DYYNGM 78 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~-~~~~~~~~e~~~~~-~~~~~~ 78 (102)
++|++++|+||+++|||++|||++++++.+.+++++|+..||.++..+|+.++..... ++++.+..|..... ..+ .
T Consensus 176 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~--~ 253 (276)
T PRK05864 176 LTGRDVDAEEAERIGLVSRQVPDEQLLDTCYAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEGLGQLFVRL--L 253 (276)
T ss_pred HcCCccCHHHHHHcCCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHhc--c
Confidence 5899999999999999999999999999999999999999999999999999887654 68888887765322 234 4
Q ss_pred ChhHHHHHHHHHhhcCCCCCCCC
Q 034158 79 TKEQFKKMQEFIAARSSKKPSSK 101 (102)
Q Consensus 79 ~~~~~~~i~~fl~k~~~~~~~~~ 101 (102)
++++++++.+|++|++|.|.+.+
T Consensus 254 ~~d~~e~~~af~~kr~p~~~~~~ 276 (276)
T PRK05864 254 TANFEEAVAARAEKRPPVFTDDK 276 (276)
T ss_pred ChhHHHHHHHHhccCCCCCCCCC
Confidence 99999999999999999998653
No 38
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=99.80 E-value=4.7e-19 Score=116.71 Aligned_cols=96 Identities=22% Similarity=0.233 Sum_probs=84.6
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++.+.+.+++++|+..||.++..+|++++..... .......|...+...+ .++
T Consensus 163 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~--~~~ 239 (259)
T TIGR01929 163 FLCRQYDAEQALDMGLVNTVVPLADLEKETVRWCREILQKSPMAIRMLKAALNADCDG-QAGLQELAGNATMLFY--MTE 239 (259)
T ss_pred HhCCccCHHHHHHcCCcccccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcc-chHHHHHHHHHHHHHh--cCc
Confidence 5899999999999999999999999999999999999999999999999999876543 3445555666777776 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|+|.+
T Consensus 240 d~~egi~af~~kr~p~~~~ 258 (259)
T TIGR01929 240 EGQEGRNAFLEKRQPDFSK 258 (259)
T ss_pred cHHHHHHHHhccCCCCCCC
Confidence 9999999999999999975
No 39
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=99.80 E-value=8.7e-19 Score=116.21 Aligned_cols=96 Identities=22% Similarity=0.232 Sum_probs=85.2
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.+++++|+..||.++..+|++++.... .+....+.|...+...+ .++
T Consensus 173 ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~--~~~ 249 (273)
T PRK07396 173 FLCRQYDAQEALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCD-GQAGLQELAGNATMLFY--MTE 249 (273)
T ss_pred HhCCCcCHHHHHHcCCcCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-cHHHHHHHHHHHHHHHh--cCh
Confidence 589999999999999999999999999999999999999999999999999987654 45555556777777776 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 250 d~~egi~af~~kr~p~~~~ 268 (273)
T PRK07396 250 EAQEGRNAFNEKRQPDFSK 268 (273)
T ss_pred hHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999975
No 40
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=99.80 E-value=1e-18 Score=115.27 Aligned_cols=97 Identities=20% Similarity=0.212 Sum_probs=86.9
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhc-CCH-HHHHHHHHHHHhHHhhcC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLK-LDL-GHALALEKERAHDYYNGM 78 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~-~~~-~~~~~~e~~~~~~~~~~~ 78 (102)
++|++++|+||+++||||+|||++++++.+.+++++|+..||.++..+|++++.... .++ ...++.|...+..++.
T Consensus 162 l~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (261)
T PRK11423 162 FTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRAVYD-- 239 (261)
T ss_pred HcCCCcCHHHHHHcCCcCcccCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHhC--
Confidence 589999999999999999999999999999999999999999999999999986543 333 5777888888888874
Q ss_pred ChhHHHHHHHHHhhcCCCCCC
Q 034158 79 TKEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 79 ~~~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++++.+|++|++|+|.+
T Consensus 240 s~d~~eg~~af~~kr~p~~~~ 260 (261)
T PRK11423 240 SEDYQEGMNAFLEKRKPVFVG 260 (261)
T ss_pred ChhHHHHHHHHhccCCCCCCC
Confidence 999999999999999999975
No 41
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=99.79 E-value=5.7e-19 Score=125.99 Aligned_cols=99 Identities=9% Similarity=0.082 Sum_probs=93.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHH-HHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHA-LALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~-~~~e~~~~~~~~~~~~ 79 (102)
+||++++|+||+++|||++|||++++++.+.+++++|++.||.++..+|++++.....+++++ +..|...+..++ .+
T Consensus 447 ~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~--~~ 524 (550)
T PRK08184 447 KIGQPLDADAAEELGLVTAAPDDIDWEDEVRIALEERASLSPDALTGMEANLRFAGPETMETRIFGRLTAWQNWIF--QR 524 (550)
T ss_pred HhCCcCCHHHHHHcCCcccccChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHh--cC
Confidence 489999999999999999999999999999999999999999999999999999988899999 999999998888 49
Q ss_pred hhHHH---HHHHHHhhcCCCCCCCC
Q 034158 80 KEQFK---KMQEFIAARSSKKPSSK 101 (102)
Q Consensus 80 ~~~~~---~i~~fl~k~~~~~~~~~ 101 (102)
+|.++ ++.+|++||+|.|...+
T Consensus 525 ~d~~e~~~g~~af~ekr~~~f~~~~ 549 (550)
T PRK08184 525 PNAVGEKGALKVYGTGQKAQFDWNR 549 (550)
T ss_pred CcccccchHHHHhccCCCCCCCCCC
Confidence 99999 99999999999998754
No 42
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=99.79 E-value=1.5e-18 Score=114.15 Aligned_cols=92 Identities=21% Similarity=0.278 Sum_probs=86.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++.+.+.+++++++..||.++..+|+.++.....++.+.+..|...+...+. ++
T Consensus 165 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--~~ 242 (256)
T PRK06143 165 LTGETIDAAQALAWGLVDRVVPLAELDAAVERLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL--TG 242 (256)
T ss_pred HcCCcCCHHHHHHCCCcCeecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999999999999999999999999999999999999988778899999999999988874 99
Q ss_pred hHHHHHHHHHhhcC
Q 034158 81 EQFKKMQEFIAARS 94 (102)
Q Consensus 81 ~~~~~i~~fl~k~~ 94 (102)
|+++++.+|++|++
T Consensus 243 d~~e~~~af~ekr~ 256 (256)
T PRK06143 243 EPQRHMAAFLNRKR 256 (256)
T ss_pred HHHHHHHHHHhhcC
Confidence 99999999999864
No 43
>PLN02921 naphthoate synthase
Probab=99.79 E-value=2.2e-18 Score=116.65 Aligned_cols=96 Identities=19% Similarity=0.190 Sum_probs=83.2
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++|||++|||.+++++.+.+++++|+..||.++..+|++++..... .......+...+..++ .++
T Consensus 227 ltG~~~~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~~~--~s~ 303 (327)
T PLN02921 227 FLARFYTASEALKMGLVNTVVPLDELEGETVKWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLLFY--GSE 303 (327)
T ss_pred HcCCcCCHHHHHHCCCceEEeCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHHHh--cCH
Confidence 5899999999999999999999999999999999999999999999999999887543 3333344446666666 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 304 d~~egi~Af~ekr~p~f~~ 322 (327)
T PLN02921 304 EGNEGRTAYLEGRAPDFSK 322 (327)
T ss_pred HHHHHHHHHhccCCCCCCC
Confidence 9999999999999999975
No 44
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=99.78 E-value=2.5e-18 Score=113.48 Aligned_cols=93 Identities=24% Similarity=0.252 Sum_probs=82.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||++++++.+.+++++|+..||.++..+|+.++......+. .+...+...+ .++
T Consensus 169 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~l~----~~~~~~~~~~--~~~ 242 (262)
T PRK06144 169 FTARLLEAEEALAAGLVNEVVEDAALDARADALAELLAAHAPLTLRATKEALRRLRREGLP----DGDDLIRMCY--MSE 242 (262)
T ss_pred HcCCCcCHHHHHHcCCcCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCHH----HHHHHHHHHh--cCh
Confidence 5899999999999999999999999999999999999999999999999999877554443 3445666666 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 243 ~~~e~~~af~~kr~p~~~~ 261 (262)
T PRK06144 243 DFREGVEAFLEKRPPKWKG 261 (262)
T ss_pred HHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 45
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=99.78 E-value=2.3e-18 Score=114.49 Aligned_cols=95 Identities=16% Similarity=0.192 Sum_probs=86.9
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||.+++++.+.+++..|+..||.++..+|+.++.....++++.+..|...+...+ .++
T Consensus 174 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~--~s~ 251 (278)
T PLN03214 174 LRGRLVRPAEAKQLGLIDEVVPAAALMEAAASAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGGWKML--SEP 251 (278)
T ss_pred HcCCccCHHHHHHcCCCcEecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh--CCH
Confidence 589999999999999999999999999999999999999999999999999998877788999999998888777 499
Q ss_pred hHHHHHHHHHhhcCCCC
Q 034158 81 EQFKKMQEFIAARSSKK 97 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~ 97 (102)
|+++++.+|++|.+.+.
T Consensus 252 d~~egi~aflek~~~~~ 268 (278)
T PLN03214 252 SIIKALGGVMERLSSGK 268 (278)
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 99999999998755443
No 46
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=99.78 E-value=4.6e-18 Score=111.77 Aligned_cols=92 Identities=21% Similarity=0.214 Sum_probs=84.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||.+++++.+.+++++|+..||.++..+|++++.....++.+.+..|...+...+ ++
T Consensus 159 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~---~~ 235 (254)
T PRK08259 159 LTGRPVDADEALAIGLANRVVPKGQARAAAEELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVL---AA 235 (254)
T ss_pred HcCCccCHHHHHHcCCCCEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH---hh
Confidence 589999999999999999999999999999999999999999999999999998877789999999988777766 49
Q ss_pred hHHHHHHHHHhhcCC
Q 034158 81 EQFKKMQEFIAARSS 95 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~ 95 (102)
++++++.+|++++.+
T Consensus 236 d~~egi~af~~~~~~ 250 (254)
T PRK08259 236 EALEGAARFAAGAGR 250 (254)
T ss_pred HHHHHHHHHHhhhcc
Confidence 999999999987653
No 47
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=99.77 E-value=3.9e-18 Score=112.20 Aligned_cols=96 Identities=19% Similarity=0.191 Sum_probs=80.6
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||.+++.+.+.+++++|+..||.++..+|++++......... ...|...+..++ .++
T Consensus 160 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~-~~~~~~~~~~~~--~~~ 236 (256)
T TIGR03210 160 YLCRRYTAQEALAMGLVNAVVPHDQLDAEVQKWCDEIVEKSPTAIAIAKRSFNMDTAHQRGI-AGMGMYALKLYY--DTA 236 (256)
T ss_pred HhCCCcCHHHHHHcCCceeeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcccchH-HHHHHHHHHHHc--cCh
Confidence 58999999999999999999999999999999999999999999999999998764432111 112344555566 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 237 d~~e~~~af~~kr~p~~~~ 255 (256)
T TIGR03210 237 ESREGVKAFQEKRKPEFRK 255 (256)
T ss_pred hHHHHHHHHhccCCCCCCC
Confidence 9999999999999999964
No 48
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=99.77 E-value=1.8e-18 Score=123.30 Aligned_cols=98 Identities=11% Similarity=0.097 Sum_probs=92.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHH-HHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHA-LALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~-~~~e~~~~~~~~~~~~ 79 (102)
+||++++|+||+++|||++|+|++++++.+.+++.+|++.||.++..+|++++.....+++.. +..|...+..++. +
T Consensus 443 ltg~~i~A~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~--~ 520 (546)
T TIGR03222 443 KIGQALDAEEAERLGLVTAAPDDIDWEDEIRIALEERASFSPDALTGLEANLRFAGPETMETRIFGRLTAWQNWIFN--R 520 (546)
T ss_pred HhCCCCCHHHHHHcCCcccccCchHHHHHHHHHHHHHHhcCHHHHHHHHHHHhhcCCcChhhhHHHHHHHHHHHHhc--C
Confidence 589999999999999999999999999999999999999999999999999999988899999 9999999988884 9
Q ss_pred hhHHH---HHHHHHhhcCCCCCCC
Q 034158 80 KEQFK---KMQEFIAARSSKKPSS 100 (102)
Q Consensus 80 ~~~~~---~i~~fl~k~~~~~~~~ 100 (102)
+|.++ ++.+|++||+|.|.-.
T Consensus 521 ~d~~e~~~g~~af~ekr~p~f~~~ 544 (546)
T TIGR03222 521 PNAVGENGALKVYGSGKKAQFDME 544 (546)
T ss_pred CcccchhhHHHHHccCCCCCCCcc
Confidence 99999 9999999999999743
No 49
>PRK08321 naphthoate synthase; Validated
Probab=99.77 E-value=5e-18 Score=114.01 Aligned_cols=96 Identities=22% Similarity=0.183 Sum_probs=85.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++|||++|||.+++++.+.+++++|+..||.++..+|++++.... ........|...+..++ .++
T Consensus 202 ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-~~~~~~~~e~~~~~~~~--~~~ 278 (302)
T PRK08321 202 FLGRTYSAEEAHDMGAVNAVVPHAELETEALEWAREINGKSPTAMRMLKYAFNLTDD-GLVGQQLFAGEATRLAY--MTD 278 (302)
T ss_pred HcCCccCHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc-ccHHHHHHHHHHHHHHh--cCH
Confidence 589999999999999999999999999999999999999999999999999987654 33444556777777777 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|..
T Consensus 279 d~~egi~af~ekr~p~~~~ 297 (302)
T PRK08321 279 EAQEGRDAFLEKRDPDWSD 297 (302)
T ss_pred HHHHHHHHHhccCCCCCCC
Confidence 9999999999999999965
No 50
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=99.77 E-value=6.4e-18 Score=111.10 Aligned_cols=92 Identities=16% Similarity=0.208 Sum_probs=86.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||.+++.+.+.+++++++..||.++..+|+.++.....++.+.+..|...+..++. ++
T Consensus 164 l~g~~~sa~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~--~~ 241 (255)
T PRK07260 164 MTGEALTAEKALEYGFVYRVAESEKLEKTCEQLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAF--KE 241 (255)
T ss_pred HhCCccCHHHHHHcCCcceecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhc--CH
Confidence 5899999999999999999999999999999999999999999999999999998888899999999998888874 99
Q ss_pred hHHHHHHHHHhhcC
Q 034158 81 EQFKKMQEFIAARS 94 (102)
Q Consensus 81 ~~~~~i~~fl~k~~ 94 (102)
++++++.+|++|++
T Consensus 242 ~~~e~~~af~~kr~ 255 (255)
T PRK07260 242 DFKEGVRAFSERRR 255 (255)
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999864
No 51
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=99.76 E-value=2e-18 Score=117.54 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=90.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHH---------------------------------------------------
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKK--------------------------------------------------- 29 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~--------------------------------------------------- 29 (102)
+||++++|+||+++|||++|||++++...
T Consensus 165 ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 244 (342)
T PRK05617 165 LTGARISAADALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATPAPASELAAQRAWIDECFAGDTVEDI 244 (342)
T ss_pred HcCCCCCHHHHHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccCCCcchhHHHHHHHHHHhCCCCHHHH
Confidence 58999999999999999999999888776
Q ss_pred -----------HHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHH-hh-cCCC
Q 034158 30 -----------AHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFI-AA-RSSK 96 (102)
Q Consensus 30 -----------a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl-~k-~~~~ 96 (102)
+.++++.|++.||.++..+|++++.....++++++..|...+..++. ++|+++++++|+ +| +.|+
T Consensus 245 ~~~l~~~~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~~~l~~~~~~e~~~~~~~~~--~~d~~egv~afl~ek~r~p~ 322 (342)
T PRK05617 245 IAALEADGGEFAAKTADTLRSRSPTSLKVTLEQLRRARGLTLEECLRRELRLALAMLR--SPDFVEGVRAVLIDKDRNPK 322 (342)
T ss_pred HHHHHhccHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHh--CCchhhccceEEEcCCCCCC
Confidence 88899999999999999999999998888999999999999988884 999999999997 66 8999
Q ss_pred CCCC
Q 034158 97 KPSS 100 (102)
Q Consensus 97 ~~~~ 100 (102)
|.++
T Consensus 323 ~~~~ 326 (342)
T PRK05617 323 WSPA 326 (342)
T ss_pred CCCC
Confidence 9775
No 52
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=99.76 E-value=9.4e-18 Score=112.39 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=83.9
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhhhcC--CHHHHHHHHHHHHhHHhhc
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKN-NQDLVLRYKAVINDGLKL--DLGHALALEKERAHDYYNG 77 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~-~~~a~~~~K~~i~~~~~~--~~~~~~~~e~~~~~~~~~~ 77 (102)
++|++++|+||+++|||++|||.++++..+.+++++|+.. +|.++..+|++++..... ... ....|...+..++
T Consensus 179 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~-~~~~e~~~~~~~~-- 255 (296)
T PRK08260 179 YSGRVFDAQEALDGGLVRSVHPPDELLPAARALAREIADNTSPVSVALTRQMMWRMAGADHPME-AHRVDSRAIYSRG-- 255 (296)
T ss_pred HcCCccCHHHHHHCCCceeecCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhcccCCCcHH-HHHHHHHHHHHHc--
Confidence 5899999999999999999999999999999999999996 999999999999987432 333 3355777777776
Q ss_pred CChhHHHHHHHHHhhcCCCCCCC
Q 034158 78 MTKEQFKKMQEFIAARSSKKPSS 100 (102)
Q Consensus 78 ~~~~~~~~i~~fl~k~~~~~~~~ 100 (102)
.++++++++.+|++|++|.|.+.
T Consensus 256 ~~~d~~egi~af~~kr~p~f~~~ 278 (296)
T PRK08260 256 RSGDGKEGVSSFLEKRPAVFPGK 278 (296)
T ss_pred cChhHHHHHHHHhcCCCCCCCCC
Confidence 49999999999999999999764
No 53
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=99.76 E-value=1.2e-17 Score=110.08 Aligned_cols=94 Identities=24% Similarity=0.244 Sum_probs=87.4
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+||++ +.+.+.+++++|+..||.++..+|+.++.....++.+.+..|...+..++. ++
T Consensus 168 ltg~~~~a~eA~~~Glv~~vv~~--~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~--~~ 243 (262)
T PRK07509 168 YTARVFSAEEALELGLVTHVSDD--PLAAALALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIRLLL--GK 243 (262)
T ss_pred HcCCCcCHHHHHHcCChhhhhch--HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc--Ch
Confidence 58999999999999999999964 678999999999999999999999999998888899999999998888884 99
Q ss_pred hHHHHHHHHHhhcCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKP 98 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~ 98 (102)
++++++.+|++|++|.|.
T Consensus 244 d~~e~~~af~ekr~p~~~ 261 (262)
T PRK07509 244 NQKIAVKAQMKKRAPKFL 261 (262)
T ss_pred hHHHHHHHHhcCCCCCCC
Confidence 999999999999999986
No 54
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=99.76 E-value=1.8e-17 Score=108.63 Aligned_cols=94 Identities=24% Similarity=0.246 Sum_probs=85.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||.+ +++++.+.+++++|+..||.++..+|++++.....++++.++.|...+..++ .++
T Consensus 154 l~g~~~~a~eA~~~Glv~~~---~~~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~--~~~ 228 (248)
T PRK06072 154 VLGGEFTAEEAERWGLLKIS---EDPLSDAEEMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLG--KTE 228 (248)
T ss_pred HhCCccCHHHHHHCCCcccc---chHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHh--CCh
Confidence 58999999999999999963 3577899999999999999999999999998877789999999999888887 499
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 229 d~~eg~~af~~kr~p~~~~ 247 (248)
T PRK06072 229 DFKEGISSFKEKREPKFKG 247 (248)
T ss_pred hHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999975
No 55
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=99.75 E-value=1.3e-17 Score=110.42 Aligned_cols=93 Identities=28% Similarity=0.377 Sum_probs=79.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHhHHhhc
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLK---LDLGHALALEKERAHDYYNG 77 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~---~~~~~~~~~e~~~~~~~~~~ 77 (102)
+||++++|+||+++|||++|||.+++++.+.+++++|++.||.++..+|+.++.... .+++..+..|. ..+
T Consensus 172 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~----~~~-- 245 (268)
T PRK07327 172 LLCEPVSGEEAERIGLVSLAVDDDELLPKALEVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEF----MGF-- 245 (268)
T ss_pred HcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH----HHc--
Confidence 589999999999999999999999999999999999999999999999999986532 23444444432 244
Q ss_pred CChhHHHHHHHHHhhcCCCCCC
Q 034158 78 MTKEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 78 ~~~~~~~~i~~fl~k~~~~~~~ 99 (102)
.++++++++.+|++|++|.|.+
T Consensus 246 ~~~d~~eg~~af~ekr~p~~~~ 267 (268)
T PRK07327 246 SGPDVREGLASLREKRAPDFPG 267 (268)
T ss_pred cChhHHHHHHHHHhcCCCCCCC
Confidence 4999999999999999999975
No 56
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=99.75 E-value=3e-17 Score=107.76 Aligned_cols=95 Identities=20% Similarity=0.220 Sum_probs=81.6
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHH-HHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHH-HHHHHHhHHhhcC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAV-AEAMIKNNQDLVLRYKAVINDGLKLDLGHALA-LEKERAHDYYNGM 78 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~-~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~-~e~~~~~~~~~~~ 78 (102)
+||++++|+||+++|||++|||+.+ ..+.++ +++|+..||.++..+|++++.....++.+.+. .|...+..++ .
T Consensus 154 ltg~~~~a~eA~~~Glv~~v~~~~~--~~a~~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~--~ 229 (251)
T TIGR03189 154 YSGRSIDGAEGARIGLANAVAEDPE--NAALAWFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELM--A 229 (251)
T ss_pred HcCCCCCHHHHHHCCCcceecCcHH--HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHh--C
Confidence 5899999999999999999998643 456665 68999999999999999999887777777663 6777777777 4
Q ss_pred ChhHHHHHHHHHhhcCCCCCC
Q 034158 79 TKEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 79 ~~~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++++.+|++|++|.|.+
T Consensus 230 s~d~~eg~~af~ekr~p~~~~ 250 (251)
T TIGR03189 230 THDAVEGLNAFLEKRPALWED 250 (251)
T ss_pred CHhHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999975
No 57
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=99.75 E-value=2.2e-17 Score=108.82 Aligned_cols=94 Identities=14% Similarity=0.208 Sum_probs=87.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++|||+++++ ++.+.+.++++++++.||.++..+|++++......++..++.|...+..++. ++
T Consensus 166 l~g~~~~a~eA~~~Glv~~v~~--~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~ 241 (260)
T PRK07827 166 LTGEKFGAAEAARIGLVTAAAD--DVDAAVAALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFV--SD 241 (260)
T ss_pred HhCCccCHHHHHHcCCcccchH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc--Ch
Confidence 5899999999999999999975 5899999999999999999999999999998888899999999988888874 99
Q ss_pred hHHHHHHHHHhhcCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKP 98 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~ 98 (102)
++++++.+|++|++|+|.
T Consensus 242 ~~~~~~~af~~kr~p~~~ 259 (260)
T PRK07827 242 EAREGMTAFLQKRPPRWA 259 (260)
T ss_pred hHHHHHHHHhcCCCCCCC
Confidence 999999999999999985
No 58
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=99.74 E-value=3.5e-17 Score=108.67 Aligned_cols=93 Identities=16% Similarity=0.209 Sum_probs=82.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHH--HhHHhhcC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKER--AHDYYNGM 78 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~--~~~~~~~~ 78 (102)
+||++++|+||+++|||++|||++++++.+.+++++|+..||.++..+|+.++.....++.+.+..|... +..++ .
T Consensus 170 ltg~~~~A~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~--~ 247 (275)
T PRK09120 170 MTGETFTGRKAAEMGLVNESVPLAQLRARTRELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQANSL--D 247 (275)
T ss_pred hcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh--C
Confidence 5899999999999999999999999999999999999999999999999999998888888888887643 33345 3
Q ss_pred Ch-hHHHHHHHHHhhcCC
Q 034158 79 TK-EQFKKMQEFIAARSS 95 (102)
Q Consensus 79 ~~-~~~~~i~~fl~k~~~ 95 (102)
++ |+++++.+|++|+..
T Consensus 248 ~~~d~~eg~~afl~kr~~ 265 (275)
T PRK09120 248 PEGGREEGLKQFLDDKSY 265 (275)
T ss_pred CHHHHHHHHHHHHhcccC
Confidence 77 899999999998773
No 59
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=99.74 E-value=3e-17 Score=107.96 Aligned_cols=94 Identities=17% Similarity=0.231 Sum_probs=84.0
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|||+++. .+.+++++++..||.++..+|+.++.. ...+.+.+..|...+...+. ++
T Consensus 161 l~g~~~~a~eA~~~Glv~~vv~~~~~--~~~~~a~~l~~~~p~a~~~~K~~~~~~-~~~~~~~~~~e~~~~~~~~~--~~ 235 (255)
T PRK07112 161 LMTQPVTAQQAFSWGLVDAYGANSDT--LLRKHLLRLRCLNKAAVARYKSYASTL-DDTVAAARPAALAANIEMFA--DP 235 (255)
T ss_pred HhCCcccHHHHHHcCCCceecCcHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHc--Ch
Confidence 58999999999999999999997553 578899999999999999999999875 44688899999888888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 236 ~~~eg~~af~~kr~p~~~~ 254 (255)
T PRK07112 236 ENLRKIARYVETGKFPWEA 254 (255)
T ss_pred HHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999975
No 60
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=99.74 E-value=1.8e-17 Score=108.22 Aligned_cols=90 Identities=23% Similarity=0.387 Sum_probs=85.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++||||+|+|++++.+.+.+++++++..|+.++..+|+.++......+.+.+..|...+...+. ++
T Consensus 156 l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 233 (245)
T PF00378_consen 156 LTGEPISAEEALELGLVDEVVPDEELDEEALELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFK--SE 233 (245)
T ss_dssp HHTCEEEHHHHHHTTSSSEEESGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHT--SH
T ss_pred cccccchhHHHHhhcceeEEcCchhhhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcC--CH
Confidence 4799999999999999999999999999999999999999999999999999998888899999999999999884 99
Q ss_pred hHHHHHHHHHhh
Q 034158 81 EQFKKMQEFIAA 92 (102)
Q Consensus 81 ~~~~~i~~fl~k 92 (102)
++++++++|++|
T Consensus 234 ~~~e~~~~f~eK 245 (245)
T PF00378_consen 234 DFQEGIAAFLEK 245 (245)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhCc
Confidence 999999999986
No 61
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=99.72 E-value=6.3e-17 Score=106.20 Aligned_cols=89 Identities=13% Similarity=0.160 Sum_probs=81.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
++|++++|+||+++|||++|||.+++.+.+.+++++|+..||.++..+|++++... .++...+..|...+...+. ++
T Consensus 163 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~-~~l~~~~~~e~~~~~~~~~--~~ 239 (251)
T PRK06023 163 ALGEGFSAEAAQEAGLIWKIVDEEAVEAETLKAAEELAAKPPQALQIARDLMRGPR-EDILARIDEEAKHFAARLK--SA 239 (251)
T ss_pred HhCCCCCHHHHHHcCCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHhC--CH
Confidence 58999999999999999999999999999999999999999999999999998764 4688888888888888874 99
Q ss_pred hHHHHHHHHHhh
Q 034158 81 EQFKKMQEFIAA 92 (102)
Q Consensus 81 ~~~~~i~~fl~k 92 (102)
++++++.+|+++
T Consensus 240 ~~~e~~~af~e~ 251 (251)
T PRK06023 240 EARAAFEAFMRR 251 (251)
T ss_pred HHHHHHHHHhcC
Confidence 999999999874
No 62
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=99.72 E-value=2.4e-17 Score=113.60 Aligned_cols=100 Identities=13% Similarity=0.210 Sum_probs=85.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHH---H------------------------------------------------
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLK---K------------------------------------------------ 29 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~---~------------------------------------------------ 29 (102)
+||++++|++|+++|||++|||++++.+ .
T Consensus 170 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e 249 (379)
T PLN02874 170 LTGARLNGKEMVACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEE 249 (379)
T ss_pred HcCCcccHHHHHHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCCCHHH
Confidence 5899999999999999999999877755 2
Q ss_pred ----------------HHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhh-cCChhHHHHHHHHH-h
Q 034158 30 ----------------AHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYN-GMTKEQFKKMQEFI-A 91 (102)
Q Consensus 30 ----------------a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~i~~fl-~ 91 (102)
+.++++.|++.||.+++.+|++++.....++.+++..|.......+. ..++|+++|+++|+ +
T Consensus 250 ii~al~~~~~~~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~~~l~~~l~~e~~~~~~~~~~~~~~D~~EGv~Aflid 329 (379)
T PLN02874 250 IIKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIREGRKQSLAECLKKEFRLTMNILRSTVSDDVYEGIRALVID 329 (379)
T ss_pred HHHHHhhcccccccHHHHHHHHHHHhcChHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHhcCcCcchhhccceEEEc
Confidence 23788899999999999999999998888999999999877665541 02899999999997 6
Q ss_pred h-cCCCCCCC
Q 034158 92 A-RSSKKPSS 100 (102)
Q Consensus 92 k-~~~~~~~~ 100 (102)
| ++|+|.++
T Consensus 330 K~r~P~w~~~ 339 (379)
T PLN02874 330 KDNAPKWNPS 339 (379)
T ss_pred CCCCCCCCCC
Confidence 6 89999875
No 63
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=99.72 E-value=1.1e-16 Score=104.65 Aligned_cols=91 Identities=23% Similarity=0.213 Sum_probs=82.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|++ +. .+.+++++|+..||.++..+|+.++.. .++++.+..|...+..++. ++
T Consensus 152 ltg~~~~a~eA~~~Glv~~v~~---~~-~a~~~a~~l~~~~~~a~~~~K~~l~~~--~~~~~~~~~e~~~~~~~~~--~~ 223 (243)
T PRK07854 152 LGAEKLTAEQALATGMANRIGT---LA-DAQAWAAEIAGLAPLALQHAKRVLNDD--GAIEEAWPAHKELFDKAWA--SQ 223 (243)
T ss_pred HcCCCcCHHHHHHCCCcccccC---HH-HHHHHHHHHHhCCHHHHHHHHHHHHcc--CCHHHHHHHHHHHHHHHhc--Cc
Confidence 5899999999999999999976 33 789999999999999999999999876 5688999999988888874 99
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
++++++.+|++|++|.|.+
T Consensus 224 d~~eg~~af~~kr~p~~~~ 242 (243)
T PRK07854 224 DAIEAQVARIEKRPPKFQG 242 (243)
T ss_pred hHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999975
No 64
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=99.70 E-value=1.6e-16 Score=104.19 Aligned_cols=88 Identities=18% Similarity=0.144 Sum_probs=81.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhc-CCHHHHHHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLK-LDLGHALALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~-~~~~~~~~~e~~~~~~~~~~~~ 79 (102)
+||++++|+||+++||||+|| +++.+.+.+++++++..||.++..+|+.++.... .++++++..|...+...+. +
T Consensus 161 ltg~~~~a~eA~~~Glv~~vv--~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~--~ 236 (249)
T PRK05870 161 LFGMRFDAEAAVRHGLALMVA--DDPVAAALELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ--S 236 (249)
T ss_pred HhCCccCHHHHHHcCCHHHHH--hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc--C
Confidence 589999999999999999999 5799999999999999999999999999998877 7899999999998888874 9
Q ss_pred hhHHHHHHHHHhh
Q 034158 80 KEQFKKMQEFIAA 92 (102)
Q Consensus 80 ~~~~~~i~~fl~k 92 (102)
+++++++.+|+++
T Consensus 237 ~d~~eg~~af~~~ 249 (249)
T PRK05870 237 PEFAARLAAAQRR 249 (249)
T ss_pred hhHHHHHHHHhcC
Confidence 9999999999864
No 65
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=99.66 E-value=1.3e-15 Score=99.94 Aligned_cols=87 Identities=14% Similarity=0.201 Sum_probs=82.2
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++++||+++|||++|||.+++.+.+.++++++++.||.++..+|+.++.....++.+.++.|...+...+. ++
T Consensus 160 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~--~~ 237 (249)
T PRK07110 160 LTARYYRGAELKKRGVPFPVLPRAEVLEKALELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFH--QP 237 (249)
T ss_pred HcCCccCHHHHHHcCCCeEEeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC--CH
Confidence 5899999999999999999999999999999999999999999999999999999888999999999999988884 99
Q ss_pred hHHHHHHHH
Q 034158 81 EQFKKMQEF 89 (102)
Q Consensus 81 ~~~~~i~~f 89 (102)
++++++.+.
T Consensus 238 ~~~egi~~~ 246 (249)
T PRK07110 238 EVKRRIESL 246 (249)
T ss_pred hHHHHHHHh
Confidence 999999864
No 66
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=99.63 E-value=6.1e-15 Score=97.09 Aligned_cols=93 Identities=24% Similarity=0.347 Sum_probs=84.8
Q ss_pred CCCcccCHHHHHhccccceecCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEE-GELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~ 79 (102)
+||+.++++||+++|||+++|+. +++++.+.++++.++. ||.++..+|..++......+++....|...+...+ .+
T Consensus 164 ltg~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~--~~ 240 (257)
T COG1024 164 LTGEPISAAEALELGLVDEVVPDAEELLERALELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLF--SS 240 (257)
T ss_pred HcCCcCCHHHHHHcCCcCeeeCCHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHh--cC
Confidence 58999999999999999999996 6899999999999999 99999999999999876668889998888887755 49
Q ss_pred hhHHHHHHHHHhhcCCCC
Q 034158 80 KEQFKKMQEFIAARSSKK 97 (102)
Q Consensus 80 ~~~~~~i~~fl~k~~~~~ 97 (102)
+++++++.+|++ |+|.|
T Consensus 241 ~d~~eg~~a~~~-r~p~~ 257 (257)
T COG1024 241 EDFREGVRAFLE-RKPVF 257 (257)
T ss_pred hhHHHHHHHHHc-cCCCC
Confidence 999999999999 88876
No 67
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=99.60 E-value=1.6e-14 Score=95.28 Aligned_cols=93 Identities=30% Similarity=0.367 Sum_probs=80.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||++++++.+.++++.|+..||.++..+|++++.....++++.++.|...+...+....+
T Consensus 160 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~~~ 239 (258)
T PRK06190 160 LTGDFLDAADALRAGLVTEVVPHDELLPRARRLAASIAGNNPAAVRALKASYDDGAAAQTGDALALEAEAARAHNRSVSP 239 (258)
T ss_pred HhCCccCHHHHHHcCCCeEecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHcCCCh
Confidence 58999999999999999999999999999999999999999999999999999988888999999999999888852224
Q ss_pred h-HHHHHHHHHhhc
Q 034158 81 E-QFKKMQEFIAAR 93 (102)
Q Consensus 81 ~-~~~~i~~fl~k~ 93 (102)
+ .......|+++.
T Consensus 240 ~~~~~~~~~~~~~~ 253 (258)
T PRK06190 240 DGIAARREAVMARG 253 (258)
T ss_pred HHHHHHHHHHHHhh
Confidence 4 344455566654
No 68
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=99.60 E-value=6.3e-15 Score=93.13 Aligned_cols=97 Identities=21% Similarity=0.286 Sum_probs=89.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||.+++++||+..|||++|||++++...+.+++..|-..+...+.+.|+..+.....+-.+++..-.+.+.+.+ .-.
T Consensus 190 ~Tg~Pi~~eeAl~sGlvskvVp~~el~~e~~~i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n~--ql~ 267 (287)
T KOG1682|consen 190 MTGLPITGEEALISGLVSKVVPAEELDKEIEEITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCENF--QLG 267 (287)
T ss_pred HhCCCCchHHHHHhhhhhhcCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcc--ccc
Confidence 589999999999999999999999999999999999999999999999999998887777788888888888777 489
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
|.++||.+|++||+|.|..
T Consensus 268 d~kegiasf~~krp~~~~h 286 (287)
T KOG1682|consen 268 DTKEGIASFFEKRPPNWKH 286 (287)
T ss_pred chHHHHHHHhccCCCCcCC
Confidence 9999999999999999974
No 69
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=99.55 E-value=1.3e-14 Score=92.43 Aligned_cols=96 Identities=25% Similarity=0.262 Sum_probs=76.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+.+|.++|+||+++|+|+.|||-++|++...+|++.|...||.+++..|..++.... ++ ..+..-.--...++. +++
T Consensus 182 fLcR~Y~A~eal~MGlVN~Vvp~~~LE~e~v~W~~E~l~kSP~AlR~LK~Afnad~D-Gl-aG~q~~ag~at~L~Y-mTd 258 (282)
T COG0447 182 FLCRQYDAEEALDMGLVNTVVPHADLEKETVQWAREMLAKSPTALRMLKAAFNADCD-GL-AGLQELAGNATLLYY-MTD 258 (282)
T ss_pred hhhhhccHHHHHhcCceeeeccHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCc-hh-hHHHHhcccceEEEE-ech
Confidence 468999999999999999999999999999999999999999999999999987653 21 112111111112232 599
Q ss_pred hHHHHHHHHHhhcCCCCCC
Q 034158 81 EQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 81 ~~~~~i~~fl~k~~~~~~~ 99 (102)
+.++|..+|++||+|.|..
T Consensus 259 Ea~EGr~AF~eKR~Pdf~~ 277 (282)
T COG0447 259 EAQEGRDAFLEKRKPDFSK 277 (282)
T ss_pred hhhhhHHHHhhccCCChHh
Confidence 9999999999999999853
No 70
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=99.52 E-value=1.2e-13 Score=101.67 Aligned_cols=92 Identities=23% Similarity=0.267 Sum_probs=82.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHH-------------HHhcCHH----------------------HH
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEA-------------MIKNNQD----------------------LV 45 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~-------------l~~~~~~----------------------a~ 45 (102)
+||++++|+||+++||||+|||++++.+.+.+++.+ ++..+|. ++
T Consensus 169 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~g~~~A~ 248 (708)
T PRK11154 169 LTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPLPVRERLLEGNPLGRALLFKQARKKTLAKTQGNYPAP 248 (708)
T ss_pred HhCCcCCHHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcCCchhhhcccCchhHHHHHHHHHHHHHHhcccCChHH
Confidence 589999999999999999999999999999999988 4566553 78
Q ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHHhhcC
Q 034158 46 LRYKAVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFIAARS 94 (102)
Q Consensus 46 ~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl~k~~ 94 (102)
..+|++++.....++++++..|.+.+..++. |+++++++.+|+..+.
T Consensus 249 ~~~k~~i~~~~~~~~~~~l~~E~~~~~~~~~--s~~~~~~~~aF~~~~~ 295 (708)
T PRK11154 249 ERILDVVRTGLEKGMSSGYEAEARAFGELAM--TPESAALRSIFFATTE 295 (708)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHH
Confidence 9999999998888999999999999999884 9999999999986543
No 71
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=99.50 E-value=2.2e-13 Score=100.37 Aligned_cols=94 Identities=22% Similarity=0.176 Sum_probs=80.7
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhc------------CHH---------HHHHHH----------
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKN------------NQD---------LVLRYK---------- 49 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~------------~~~---------a~~~~K---------- 49 (102)
+||++++|+||+++||||+|||++++++.+.+++++++.. +|. ++..+|
T Consensus 168 ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~p~a~~~~~~~~~~~~~k~~~~~~~~~~ 247 (715)
T PRK11730 168 AAGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIAGKLDWKARRQPKLEPLKLSKIEAMMSFTTAKGMVAQKAGKH 247 (715)
T ss_pred HcCCcCCHHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCccccccCcccccccccchhHHHHHHHHHHHHHHhhccC
Confidence 5899999999999999999999999999999999999865 354 345566
Q ss_pred --------HHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHHhhcCCC
Q 034158 50 --------AVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFIAARSSK 96 (102)
Q Consensus 50 --------~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl~k~~~~ 96 (102)
++++.....+++++++.|.+.+..++. ++++++++.+|++++..+
T Consensus 248 ~pa~~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~--s~d~~egi~aF~~~~~~~ 300 (715)
T PRK11730 248 YPAPMTAVKTIEAAAGLGRDEALELEAKGFVKLAK--TNVARALVGIFLNDQYVK 300 (715)
T ss_pred CccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHhc
Confidence 457777777899999999999999984 999999999999876543
No 72
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=99.48 E-value=2.6e-13 Score=88.10 Aligned_cols=91 Identities=14% Similarity=0.207 Sum_probs=86.2
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+.|++++|+||++.|||++++|.+.+.+.+...+++++..+|.++..+|++++......+..+.+.|.......|. ++
T Consensus 173 l~~~kltA~Ea~~~glVskif~~~tf~~~v~~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~~W~--s~ 250 (266)
T KOG0016|consen 173 LFGEKLTAQEACEKGLVSKIFPAETFNEEVLKKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLKQWV--SA 250 (266)
T ss_pred HhCCcccHHHHHhcCchhhhcChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhcc--Ch
Confidence 4689999999999999999999999999999999999999999999999999999888899999999999999994 99
Q ss_pred hHHHHHHHHHhhc
Q 034158 81 EQFKKMQEFIAAR 93 (102)
Q Consensus 81 ~~~~~i~~fl~k~ 93 (102)
|..+.+..|+.+.
T Consensus 251 e~~~~~~~~~~~~ 263 (266)
T KOG0016|consen 251 ECLARFKQYLSKK 263 (266)
T ss_pred HHHHHHHHHhccc
Confidence 9999999998764
No 73
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=99.48 E-value=3.8e-13 Score=98.88 Aligned_cols=92 Identities=23% Similarity=0.257 Sum_probs=80.0
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHH-------------HHHhcCHHH----------------------H
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAE-------------AMIKNNQDL----------------------V 45 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~-------------~l~~~~~~a----------------------~ 45 (102)
+||++++|++|+++||||+|||++++++.+.+++. .++..+|.+ .
T Consensus 164 ltG~~~~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~k~~~~~~~~~~~a~ 243 (699)
T TIGR02440 164 LTGKQLRAKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRKPLSLQERLLEGTPLGRALLFDQAAKKTAKKTQGNYPAA 243 (699)
T ss_pred HcCCcCCHHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCCCccchhhhcccCchhHHHHHHHHHHHHHHhcccCChhH
Confidence 58999999999999999999999999999999997 566666665 4
Q ss_pred HHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHHhhcC
Q 034158 46 LRYKAVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFIAARS 94 (102)
Q Consensus 46 ~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl~k~~ 94 (102)
..+|+.++.....++++++..|.+.+..++. ++++++++..|+..+.
T Consensus 244 ~~~~~~i~~~~~~~~~~~l~~E~~~~~~~~~--s~~~~~~~~~f~~~~~ 290 (699)
T TIGR02440 244 ERILDVVRQGLAQGMQKGLDAEARAFGELVM--TPESAALRSIFFATTE 290 (699)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHH
Confidence 4566778888888999999999999999984 9999999999986433
No 74
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=99.45 E-value=5e-13 Score=89.39 Aligned_cols=75 Identities=21% Similarity=0.176 Sum_probs=68.9
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcC-CHHHHHHHHHHHHhHHh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKL-DLGHALALEKERAHDYY 75 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~-~~~~~~~~e~~~~~~~~ 75 (102)
+||++++|+||+++|||++|||.+++++.+.+++++|+..||.++..+|+.++..... ++++++..|.......+
T Consensus 182 ltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (288)
T PRK08290 182 FTGDRLTADEAHRLGMVNRVVPRDELEAETLELARRIAAMPPFGLRLTKRAVNQTLDAQGFRAALDAVFDLHQLGH 257 (288)
T ss_pred HcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHcc
Confidence 6899999999999999999999999999999999999999999999999999988764 68999998888776655
No 75
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=99.43 E-value=2.5e-13 Score=88.12 Aligned_cols=70 Identities=19% Similarity=0.182 Sum_probs=63.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHH
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKER 70 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~ 70 (102)
++|++++|+||+++||||+|||++++.+.+.+++++++..||.++..+|+.++.....++.++++.|...
T Consensus 158 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~ 227 (229)
T PRK06213 158 INAEMFDPEEAVAAGFLDEVVPPEQLLARAQAAARELAGLNMGAHAATKLKVRAAALEAIRAAIEGDAAE 227 (229)
T ss_pred HcCcccCHHHHHHCCCceeccChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhchhhhhhh
Confidence 5899999999999999999999999999999999999999999999999999988766777777776654
No 76
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=99.42 E-value=9.1e-13 Score=91.45 Aligned_cols=94 Identities=6% Similarity=0.067 Sum_probs=79.3
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||+.++|+||+++|||+++||.+++ +.+.+++..++..+|.++..+|+.++... .+....+..+...+..++ .++
T Consensus 198 LTG~~i~A~eA~~~GLv~~vVp~~~l-~~~~~~~~~i~~~~p~av~~~k~~~~~~~-~~~~~~l~~~~~~i~~~f--~~~ 273 (401)
T PLN02157 198 LTGLKLSGAEMLACGLATHYIRSEEI-PVMEEQLKKLLTDDPSVVESCLEKCAEVA-HPEKTGVIRRIDLLEKCF--SHD 273 (401)
T ss_pred HcCCcCCHHHHHHcCCceEEeCHhHH-HHHHHHHHHHHcCCHHHHHHHHHHHhccc-CCcchhHHHHHHHHHHHh--cCC
Confidence 68999999999999999999999888 67779999999999999999999987652 345566777777777777 489
Q ss_pred hHHHHHHHH---HhhcCCCCC
Q 034158 81 EQFKKMQEF---IAARSSKKP 98 (102)
Q Consensus 81 ~~~~~i~~f---l~k~~~~~~ 98 (102)
++.+++.+| .+|+.+.|.
T Consensus 274 d~~ei~~al~~~~~kr~~~wa 294 (401)
T PLN02157 274 TVEEIIDSLEIEAGRRKDTWC 294 (401)
T ss_pred CHHHHHHHHHhhhcccchHHH
Confidence 999999999 666667774
No 77
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=99.41 E-value=2.6e-12 Score=86.45 Aligned_cols=57 Identities=23% Similarity=0.322 Sum_probs=54.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhc
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLK 57 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~ 57 (102)
+||++|+|+||+++|||++|||.+++++.+.+++++|+..||.++..+|++++..+.
T Consensus 190 ltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~la~~ia~~~~~a~~~~K~~l~~~~~ 246 (302)
T PRK08272 190 FTGDCITGAQAAEWGLAVEAVPPEELDERTERLVERIAAVPVNQLAMVKLAVNSALL 246 (302)
T ss_pred HcCCccCHHHHHHcCCCceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999999999998764
No 78
>PRK08788 enoyl-CoA hydratase; Validated
Probab=99.36 E-value=9.2e-12 Score=83.31 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=73.2
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCCh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTK 80 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 80 (102)
+||++++|+||+++||||+|||++++++.+.+++++|+.. |.++..+|+..+.....++++.+..|......++. ...
T Consensus 187 ltG~~l~A~eA~~~GLV~~vv~~~el~~~a~~~a~~ia~~-~~~~~a~k~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 264 (287)
T PRK08788 187 LSGKLYTAEELHDMGLVDVLVEDGQGEAAVRTFIRKSKRK-LNGWRAMLRARRRVNPLSLEELMDITEIWVDAALQ-LEE 264 (287)
T ss_pred HcCCCCCHHHHHHCCCCcEecCchHHHHHHHHHHHHHhcC-ccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhh-ccc
Confidence 5899999999999999999999999999999999999987 77777777777776667888888888766654442 355
Q ss_pred hHHHHHHHHHhh
Q 034158 81 EQFKKMQEFIAA 92 (102)
Q Consensus 81 ~~~~~i~~fl~k 92 (102)
.-.+-|..|++.
T Consensus 265 ~~~~~~~~~~~~ 276 (287)
T PRK08788 265 KDLRTMERLVRA 276 (287)
T ss_pred ccHHHHHHHHHH
Confidence 566777777754
No 79
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=99.35 E-value=1.8e-12 Score=82.71 Aligned_cols=97 Identities=25% Similarity=0.363 Sum_probs=89.7
Q ss_pred CCCcccCHHHHHhccccceecCCc----hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEG----ELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYN 76 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~----~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~ 76 (102)
+||+.+++.||...|+|++||... ...+.+.++++.|.-+.|.++++.|..|+.+...++.+++..|..++..+.
T Consensus 190 ftarvl~g~eA~~lGlVnhvv~qneegdaa~~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~iEe~CYaq~i- 268 (291)
T KOG1679|consen 190 FTARVLNGAEAAKLGLVNHVVEQNEEGDAAYQKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLSIEEMCYAQII- 268 (291)
T ss_pred hhheeccchhHHhcchHHHHHhcCccccHHHHHHHHHHHHhccCCchhhhHHHHHhccCceecccccccHHHHHHHhcC-
Confidence 589999999999999999999763 577789999999999999999999999999999999999999999999887
Q ss_pred cCChhHHHHHHHHHhhcCCCCCC
Q 034158 77 GMTKEQFKKMQEFIAARSSKKPS 99 (102)
Q Consensus 77 ~~~~~~~~~i~~fl~k~~~~~~~ 99 (102)
.+.|--+++.+|-+||.|.+++
T Consensus 269 -~t~drLeglaaf~ekr~p~y~G 290 (291)
T KOG1679|consen 269 -PTKDRLEGLAAFKEKRKPEYKG 290 (291)
T ss_pred -cHHHHHHHHHHHHhhcCCCcCC
Confidence 4899999999999999998875
No 80
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=99.35 E-value=1.9e-11 Score=84.55 Aligned_cols=101 Identities=15% Similarity=0.191 Sum_probs=77.6
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHH----------------------------------------------
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVA---------------------------------------------- 34 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~---------------------------------------------- 34 (102)
|||++++|.+|+++|||+++||++++...+.+++
T Consensus 170 LTG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~ 249 (381)
T PLN02988 170 LTGARLDGAEMLACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEE 249 (381)
T ss_pred HcCCCCCHHHHHHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHH
Confidence 6899999999999999999999876554443332
Q ss_pred ---------------------HHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcC-ChhHHHHHHHHHh-
Q 034158 35 ---------------------EAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGM-TKEQFKKMQEFIA- 91 (102)
Q Consensus 35 ---------------------~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~i~~fl~- 91 (102)
..|.+.+|.++..+.+.++++...++.+++..|..+...+.... ++||.+||++-|-
T Consensus 250 i~~~L~~~~~~~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~~sl~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiD 329 (381)
T PLN02988 250 IISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRLQGVGQCLIREYRMVCHVMKGEISKDFVEGCRAILVD 329 (381)
T ss_pred HHHHHHhhccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCchHHHhHHHHhcC
Confidence 11233456677777788888888899999999999888776200 5999999999873
Q ss_pred -hcCCCCCCCC
Q 034158 92 -ARSSKKPSSK 101 (102)
Q Consensus 92 -k~~~~~~~~~ 101 (102)
+++|+|.++.
T Consensus 330 Kd~~P~W~p~~ 340 (381)
T PLN02988 330 KDKNPKWEPRR 340 (381)
T ss_pred CCCCCCCCCCC
Confidence 4789999764
No 81
>PRK05869 enoyl-CoA hydratase; Validated
Probab=99.29 E-value=9.8e-12 Score=80.45 Aligned_cols=57 Identities=21% Similarity=0.261 Sum_probs=53.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhc
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLK 57 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~ 57 (102)
++|++++|+||+++||||+|+|.+++++.+.+++++|+..||.++..+|+.++...+
T Consensus 165 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~~~~~~~ 221 (222)
T PRK05869 165 FSGRFFDAEEALALGLIDEMVAPDDVYDAAAAWARRFLDGPPHALAAAKAGISDVYE 221 (222)
T ss_pred HcCCCcCHHHHHHCCCCCEeeCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhh
Confidence 589999999999999999999999999999999999999999999999999987643
No 82
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=99.24 E-value=1.5e-10 Score=80.60 Aligned_cols=100 Identities=11% Similarity=0.018 Sum_probs=76.1
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHH----------------------------------------------
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVA---------------------------------------------- 34 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~---------------------------------------------- 34 (102)
+||++++|++|+++||++++||.+++. .+.+.+
T Consensus 203 LTG~~i~a~eA~~~GLa~~~v~~~~l~-~l~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~~~F~~~sv~ 281 (407)
T PLN02851 203 LTGQKLNGVEMIACGLATHYCLNARLP-LIEERLGKLLTDDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVE 281 (407)
T ss_pred HhCCcCCHHHHHHCCCceeecCHhhHH-HHHHHHHhhccCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHhCCCCHH
Confidence 689999999999999999999876431 111111
Q ss_pred ----------------------HHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhh-cCChhHHHHHHHHH-
Q 034158 35 ----------------------EAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYN-GMTKEQFKKMQEFI- 90 (102)
Q Consensus 35 ----------------------~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~i~~fl- 90 (102)
+.|.+.+|.++..+.+.++.+...++.+++..|..+...++. ..++||.+||++-+
T Consensus 282 ~I~~~L~~~~~~~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~~sl~e~l~~E~~l~~~~~~~~~~~DF~EGVRA~LI 361 (407)
T PLN02851 282 EIIEALENEAASSYDEWCKKALKKIKEASPLSLKVTLQSIREGRFQTLDQCLAREYRISLCGVSKWVSGDFCEGVRARLV 361 (407)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhc
Confidence 123445677888888889988888999999999998776641 02799999999987
Q ss_pred -hhcCCCCCCCC
Q 034158 91 -AARSSKKPSSK 101 (102)
Q Consensus 91 -~k~~~~~~~~~ 101 (102)
++++|+|.++.
T Consensus 362 DKd~~P~W~p~s 373 (407)
T PLN02851 362 DKDFAPKWDPPS 373 (407)
T ss_pred CCCCCCCCCCCC
Confidence 35789999764
No 83
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=99.24 E-value=1.7e-11 Score=78.76 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=80.1
Q ss_pred CCCcccCHHHHHhccccceecCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCC
Q 034158 1 MAATPITAEQGERWGLVNHVVEE-GELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMT 79 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~ 79 (102)
+|++.|+|.||++.|||++|+|+ ++++..+..++..|+..+|.++..+|+.++..++...++++..=.-+--..+ .+
T Consensus 193 fTar~f~a~EAl~~GLvSrvf~dk~~ll~~~l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L--~s 270 (292)
T KOG1681|consen 193 FTARKFSADEALDSGLVSRVFPDKEELLNGALPMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSML--LS 270 (292)
T ss_pred hhhhhcchhhhhhcCcchhhcCCHHHHHhhhHHHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHH--HH
Confidence 58999999999999999999998 7799999999999999999999999999999998888888876554432222 28
Q ss_pred hhHHHHHHHHHhhcCCC
Q 034158 80 KEQFKKMQEFIAARSSK 96 (102)
Q Consensus 80 ~~~~~~i~~fl~k~~~~ 96 (102)
.|..+.+.+-+.|+++.
T Consensus 271 ~Dl~~av~a~m~k~k~~ 287 (292)
T KOG1681|consen 271 DDLVKAVMAQMEKLKTV 287 (292)
T ss_pred HHHHHHHHHHhhcCCCC
Confidence 99999988888876543
No 84
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=99.12 E-value=7e-10 Score=82.07 Aligned_cols=92 Identities=17% Similarity=0.165 Sum_probs=72.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcC--------H----------H-------------------
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNN--------Q----------D------------------- 43 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~--------~----------~------------------- 43 (102)
+||++++|++|+++||||+++|.+++.+.+.+++..+.... + .
T Consensus 168 ltG~~~~A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (714)
T TIGR02437 168 ASGKENRAEDALKVGAVDAVVTADKLGAAALQLLKDAINGKLDWKAKRQPKLEPLKLSKIEAMMSFTTAKGMVAQVAGPH 247 (714)
T ss_pred HcCCcCCHHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCcccccCCCCcccccccchHHHHHHHHHHHHHHHhhcCC
Confidence 58999999999999999999999999999999997744310 0 0
Q ss_pred --HHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHHhhcC
Q 034158 44 --LVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFIAARS 94 (102)
Q Consensus 44 --a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl~k~~ 94 (102)
+...+-+.++.....++++++..|.+.|.+++ .||+.+..+..|+..+.
T Consensus 248 ~pap~~~~~~v~~~~~~~~~~gl~~E~~~f~~l~--~s~~a~~l~~~ff~~r~ 298 (714)
T TIGR02437 248 YPAPMTAVKTIEKAARFGRDKALEIEAKGFVKLA--KTSEAKALIGLFLNDQY 298 (714)
T ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHhhhHh
Confidence 11122245666666789999999999999998 49999999999986544
No 85
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=99.03 E-value=3.2e-09 Score=78.81 Aligned_cols=92 Identities=17% Similarity=0.232 Sum_probs=71.6
Q ss_pred CCCcccCHHHHHhccccceecCC-------------chHHHHHHHHHHHHHhcC----------H---------------
Q 034158 1 MAATPITAEQGERWGLVNHVVEE-------------GELLKKAHAVAEAMIKNN----------Q--------------- 42 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~-------------~~l~~~a~~~~~~l~~~~----------~--------------- 42 (102)
+||++++|++|+++||||+|||+ +.+.+.+..++..++... +
T Consensus 176 ltG~~i~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (737)
T TIGR02441 176 LTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVHKITQYVMTNPFVRQQ 255 (737)
T ss_pred HcCCcCCHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccCccchhhcccchhHHH
Confidence 58999999999999999999986 457788888886653211 0
Q ss_pred -----------------HHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHHhhcC
Q 034158 43 -----------------DLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFIAARS 94 (102)
Q Consensus 43 -----------------~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl~k~~ 94 (102)
.+...+.+++......++++++..|.+.|.+++ .||+.+..+..|+..+.
T Consensus 256 ~~~~~~~~~~~~~~g~~~Ap~~~l~~v~~~~~~~~~~gl~~E~~~f~~l~--~s~~a~al~~~f~~~~~ 322 (737)
T TIGR02441 256 VYKTAEDKVMKQTKGLYPAPLKILDVVRTGYDQGPDAGYEAESKAFGELS--MTFESKALIGLFHGQTD 322 (737)
T ss_pred HHHHHHHHHHHhccCCCccHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHH
Confidence 012334456676766789999999999999998 49999999999986443
No 86
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=98.91 E-value=2.8e-09 Score=69.74 Aligned_cols=56 Identities=18% Similarity=0.291 Sum_probs=50.4
Q ss_pred CCCcccCHHHHHhccccceecCC-chHHHHHHHHHHHHHhc--CHHHHHHHHHHHHhhh
Q 034158 1 MAATPITAEQGERWGLVNHVVEE-GELLKKAHAVAEAMIKN--NQDLVLRYKAVINDGL 56 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~~~~l~~~--~~~a~~~~K~~i~~~~ 56 (102)
++|++++|+||+++||||+|||. +++++.+.++++.|++. ++.+...+|+.++...
T Consensus 162 ltG~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~~A~~ia~~~~~~~~~~~~k~~~~~~~ 220 (239)
T PLN02267 162 LRAAKLTAEEAVEMGIVDSAHDSAEETVEAAVRLGEELAARKWNGEVYASIRKSLLPEV 220 (239)
T ss_pred HcCCcCCHHHHHHCCCcceecCCHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHH
Confidence 58999999999999999999985 68999999999999987 6678999999887654
No 87
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=98.87 E-value=1.9e-08 Score=59.32 Aligned_cols=72 Identities=13% Similarity=0.121 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHH--hhcCCCCCCCC
Q 034158 28 KKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFI--AARSSKKPSSK 101 (102)
Q Consensus 28 ~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl--~k~~~~~~~~~ 101 (102)
+.+.+....|...+|.++..+-++++++...++.+++..|..+...++. ++|+.+||++-| +.+.|+|.++.
T Consensus 31 ~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~~sl~e~l~~E~~~a~~~~~--~~DF~EGVRA~LIDKd~~P~W~p~~ 104 (118)
T PF13766_consen 31 EWAQKTLETLRSGSPLSLKVTFEQLRRGRNLSLAECLRMEYRLASRCMR--HPDFAEGVRALLIDKDKNPKWSPAS 104 (118)
T ss_dssp HHHHHHHHHHCCS-HHHHHHHHHHHHCCTTS-HHHHHHHHHHHHHHHHC--CSCHHHHHHHHTTS-------SSSS
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhc--cchHHHHHHHHHhcCCCCCCCCCCC
Confidence 3455566778899999999999999999999999999999999988874 899999999987 34789999864
No 88
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.83 E-value=1.2e-08 Score=69.52 Aligned_cols=99 Identities=15% Similarity=0.204 Sum_probs=78.0
Q ss_pred CCCcccCHHHHHhccccceecCCchH---HHHHH----------------------------------------------
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGEL---LKKAH---------------------------------------------- 31 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l---~~~a~---------------------------------------------- 31 (102)
|||+++++.+|+..||.++.||.++| ++...
T Consensus 200 LTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~~~Fs~~tVe 279 (401)
T KOG1684|consen 200 LTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVINKCFSANTVE 279 (401)
T ss_pred hccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHHHhhccccHH
Confidence 68999999999999999999987643 22221
Q ss_pred --------------------HHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHH-
Q 034158 32 --------------------AVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFI- 90 (102)
Q Consensus 32 --------------------~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl- 90 (102)
+..+.|...+|.++..+-+.|+.+....+++++..|.+...... .++||.||+++-|
T Consensus 280 eIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~~tl~~~l~~Eyr~s~~~~--~~~DF~EGvRA~LI 357 (401)
T KOG1684|consen 280 EIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSKQTLDQCLTMEYRLSLRML--MRGDFCEGVRAVLI 357 (401)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh--hccchhhhhhheee
Confidence 00122445677788888899999888899999999999877665 4999999999987
Q ss_pred -hhcCCCCCCCC
Q 034158 91 -AARSSKKPSSK 101 (102)
Q Consensus 91 -~k~~~~~~~~~ 101 (102)
++++|+|.+.+
T Consensus 358 DKd~~PKW~p~~ 369 (401)
T KOG1684|consen 358 DKDQNPKWDPAS 369 (401)
T ss_pred cCCcCCCCCCcc
Confidence 45889999864
No 89
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=98.59 E-value=2e-07 Score=64.05 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=47.7
Q ss_pred CCCcccCHHHHHhccccceecCCchH------------HHHHHHHHHHHHhcCHH--HHHHHHHHHHhh
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGEL------------LKKAHAVAEAMIKNNQD--LVLRYKAVINDG 55 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l------------~~~a~~~~~~l~~~~~~--a~~~~K~~i~~~ 55 (102)
++|++++|++|+++|||++|||+.++ ++.+.++.+.+...++. +...+|.+++..
T Consensus 190 ltGe~~sA~EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~ 258 (360)
T TIGR03200 190 TLCEPWSAHKAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQG 258 (360)
T ss_pred HhCCcCcHHHHHHcCChheecCchhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcc
Confidence 58999999999999999999999888 78888888888888777 888888888763
No 90
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=98.51 E-value=9.7e-08 Score=68.92 Aligned_cols=43 Identities=14% Similarity=0.294 Sum_probs=40.5
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHH
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQD 43 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~ 43 (102)
+||++++|+||+++|||++|||++++++.+.+++.+|+..||.
T Consensus 190 ltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~ 232 (546)
T TIGR03222 190 TIEEGVRGKRAKEWRLVDEVVKPSQFDAAIAERAAELAAQSDR 232 (546)
T ss_pred HcCCCccHHHHHHcCCceEEeChHHHHHHHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999999999998764
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=98.46 E-value=1.4e-07 Score=68.19 Aligned_cols=43 Identities=16% Similarity=0.288 Sum_probs=40.4
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhcCHH
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQD 43 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~ 43 (102)
+||++|+|+||+++||||+|||++++.+.+.+++.+|+..||.
T Consensus 194 ltG~~i~AeeA~~~GLVd~vv~~d~l~~~a~~~A~~ia~~~~~ 236 (550)
T PRK08184 194 TIEEGVRGKRAVDWRLVDEVVKPSKFDAKVAERAAELAAASDR 236 (550)
T ss_pred HhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCCC
Confidence 4899999999999999999999999999999999999988765
No 92
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=98.28 E-value=1.1e-05 Score=56.60 Aligned_cols=73 Identities=11% Similarity=0.020 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhc-CChhHHHHHHHHH--hhcCCCCCCCC
Q 034158 29 KAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNG-MTKEQFKKMQEFI--AARSSKKPSSK 101 (102)
Q Consensus 29 ~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~-~~~~~~~~i~~fl--~k~~~~~~~~~ 101 (102)
.+.+....|.+.+|.++..+.+.++++...++.+++..|..+...++.+ .++||.|||++-+ ++++|+|.++.
T Consensus 293 wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~~~l~e~~~~e~~~~~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~p~~ 368 (401)
T PLN02157 293 WCITTLRRLKESSPLSLKVALRSIREGRLQTLDQCLIREYRMSLQGLIGPMSGNFCEGVRARLIDKDEAPKWDPPS 368 (401)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHcCCCCCCCCCCCC
Confidence 3444556688899999999999999998889999999999988776621 2699999999987 34789999864
No 93
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=98.04 E-value=4.2e-06 Score=52.76 Aligned_cols=36 Identities=36% Similarity=0.496 Sum_probs=32.8
Q ss_pred CCCcccCHHHHHhccccceecCCchHHHHHHHHHHH
Q 034158 1 MAATPITAEQGERWGLVNHVVEEGELLKKAHAVAEA 36 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~ 36 (102)
++|++++++||+++|||+++++.+++.+.+.+++..
T Consensus 159 l~g~~~~a~ea~~~Glv~~~~~~~~l~~~a~~~a~~ 194 (195)
T cd06558 159 LTGRRISAEEALELGLVDEVVPDEELLAAALELARR 194 (195)
T ss_pred HcCCccCHHHHHHcCCCCeecChhHHHHHHHHHHhh
Confidence 479999999999999999999998899988888764
No 94
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=97.44 E-value=7.4e-05 Score=47.26 Aligned_cols=29 Identities=31% Similarity=0.489 Sum_probs=24.7
Q ss_pred CCCcccCHHHHHhccccceecCCc-hHHHH
Q 034158 1 MAATPITAEQGERWGLVNHVVEEG-ELLKK 29 (102)
Q Consensus 1 ltg~~~~a~eA~~~Glv~~vv~~~-~l~~~ 29 (102)
++|+.++|+||+++||||+|+++. +++..
T Consensus 143 ~~g~~~~a~eA~~~Glvd~v~~~~~~~~~~ 172 (187)
T cd07020 143 RESLSLTAEEALKLGVIDLIAADLNELLKK 172 (187)
T ss_pred HcCCeecHHHHHHcCCcccccCCHHHHHHH
Confidence 378999999999999999999985 56543
No 95
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=95.59 E-value=0.003 Score=46.55 Aligned_cols=40 Identities=28% Similarity=0.179 Sum_probs=32.1
Q ss_pred CCcccCHHHHHhccccceecCCchHHHHHHHHHHHHHhc-CHHHH
Q 034158 2 AATPITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKN-NQDLV 45 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~-~~~a~ 45 (102)
+|+.+++++|+++||||++. .+ +.+.+.+..++.. ++..+
T Consensus 490 ~Grv~tg~eA~~~GLVD~ig---~~-~~Ai~~a~~la~~~~~~~v 530 (584)
T TIGR00705 490 QGRVWTGEDAVSNGLVDALG---GL-DEAVAKAAKLAHCREQWSV 530 (584)
T ss_pred hCCCcCHHHHHHcCCcccCC---CH-HHHHHHHHHHcCCCCCceE
Confidence 68999999999999999994 34 6677888888887 54433
No 96
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=95.59 E-value=0.005 Score=37.75 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=25.2
Q ss_pred CCcccCHHHHHhccccceecCCchHHHHHHH
Q 034158 2 AATPITAEQGERWGLVNHVVEEGELLKKAHA 32 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~ 32 (102)
.|..+++++|++.||||++...+++...+.+
T Consensus 119 ~~~~~~~~~A~~~GLiD~i~~~~~~~~~l~~ 149 (154)
T PF01343_consen 119 DGGVFTAQQALELGLIDEIGTFDEAIARLAK 149 (154)
T ss_dssp CCHEEEHHHHHHTTSSSEETSHHHHHHHHHH
T ss_pred hhccccHHHHHHcCchhhcCCHHHHHHHHHH
Confidence 5788999999999999999877666655544
No 97
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=95.11 E-value=0.018 Score=37.03 Aligned_cols=30 Identities=23% Similarity=0.219 Sum_probs=24.3
Q ss_pred CCcccCHHHHHhccccceecCCchHHHHHH
Q 034158 2 AATPITAEQGERWGLVNHVVEEGELLKKAH 31 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~ 31 (102)
.|+.+++++|++.||||++...+++.+.+.
T Consensus 174 ~~~~~~~~~A~~~gLvD~i~~~~~~~~~~~ 203 (207)
T TIGR00706 174 DGRVFTGRQALKLRLVDKLGTEDDALKWLA 203 (207)
T ss_pred cCCcccHHHHHHcCCCcccCCHHHHHHHHH
Confidence 478899999999999999987666554443
No 98
>PRK11778 putative inner membrane peptidase; Provisional
Probab=93.52 E-value=0.061 Score=37.14 Aligned_cols=30 Identities=17% Similarity=0.226 Sum_probs=24.5
Q ss_pred CCcccCHHHHHhccccceecCCchHHHHHH
Q 034158 2 AATPITAEQGERWGLVNHVVEEGELLKKAH 31 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~ 31 (102)
+|+.+++++|++.||||++...+++...+.
T Consensus 265 ~G~v~~g~~Al~~GLVD~Ig~~dd~i~~~~ 294 (330)
T PRK11778 265 TGEHWYGQQALELGLVDEIQTSDDYLLELM 294 (330)
T ss_pred hCCCcCHHHHHHCCCCCcCCCHHHHHHHHH
Confidence 689999999999999999988766544333
No 99
>smart00250 PLEC Plectin repeat.
Probab=93.34 E-value=0.069 Score=24.92 Aligned_cols=18 Identities=22% Similarity=0.479 Sum_probs=16.7
Q ss_pred CCcccCHHHHHhccccce
Q 034158 2 AATPITAEQGERWGLVNH 19 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~ 19 (102)
||+++|-.+|++.|+||.
T Consensus 18 t~~~lsv~eA~~~glid~ 35 (38)
T smart00250 18 TGQKLSVEEALRRGLIDP 35 (38)
T ss_pred CCCCcCHHHHHHcCCCCc
Confidence 789999999999999985
No 100
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=92.63 E-value=0.052 Score=26.37 Aligned_cols=18 Identities=17% Similarity=0.431 Sum_probs=15.9
Q ss_pred CCcccCHHHHHhccccce
Q 034158 2 AATPITAEQGERWGLVNH 19 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~ 19 (102)
||++++-.+|++.||||.
T Consensus 18 tg~~lsv~~A~~~glId~ 35 (45)
T PF00681_consen 18 TGERLSVEEAIQRGLIDS 35 (45)
T ss_dssp TTEEEEHHHHHHTTSS-H
T ss_pred CCeEEcHHHHHHCCCcCH
Confidence 789999999999999976
No 101
>PRK10949 protease 4; Provisional
Probab=92.60 E-value=0.098 Score=39.06 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=23.8
Q ss_pred CCcccCHHHHHhccccceecCCchHHHHHHH
Q 034158 2 AATPITAEQGERWGLVNHVVEEGELLKKAHA 32 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~ 32 (102)
.|+.+++++|++.||||++-..++....+.+
T Consensus 508 ~Grv~tg~~A~~~GLVD~lG~~~~ai~~a~~ 538 (618)
T PRK10949 508 QGHVWTGQDAKANGLVDSLGDFDDAVAKAAE 538 (618)
T ss_pred cCCcccHHHHHHcCCCccCCCHHHHHHHHHH
Confidence 5899999999999999999765444433333
No 102
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=90.77 E-value=0.13 Score=34.35 Aligned_cols=19 Identities=26% Similarity=0.695 Sum_probs=17.1
Q ss_pred cccCHHHHHhccccceecC
Q 034158 4 TPITAEQGERWGLVNHVVE 22 (102)
Q Consensus 4 ~~~~a~eA~~~Glv~~vv~ 22 (102)
+.++|.||.++||||.|+.
T Consensus 238 ~fmsa~EA~eyGliD~v~~ 256 (275)
T KOG0840|consen 238 RFMSAEEAKEYGLIDKVID 256 (275)
T ss_pred ccCCHHHHHHhcchhhhhc
Confidence 4589999999999999986
No 103
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=88.59 E-value=2 Score=28.82 Aligned_cols=19 Identities=37% Similarity=0.450 Sum_probs=17.5
Q ss_pred ccCHHHHHhccccceecCC
Q 034158 5 PITAEQGERWGLVNHVVEE 23 (102)
Q Consensus 5 ~~~a~eA~~~Glv~~vv~~ 23 (102)
.+++.++.+.|+||+|+|+
T Consensus 196 ~~~a~~l~~~g~iD~ii~e 214 (256)
T PRK12319 196 KITAGELLEMGVVDKVIPE 214 (256)
T ss_pred CCCHHHHHHCCCCcEecCC
Confidence 5799999999999999985
No 104
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=87.10 E-value=2.8 Score=29.06 Aligned_cols=20 Identities=25% Similarity=0.479 Sum_probs=18.0
Q ss_pred cccCHHHHHhccccceecCC
Q 034158 4 TPITAEQGERWGLVNHVVEE 23 (102)
Q Consensus 4 ~~~~a~eA~~~Glv~~vv~~ 23 (102)
-+++|++.+++|+||+|+|+
T Consensus 251 ~~ita~dL~~~giiD~ii~E 270 (322)
T CHL00198 251 LKITSEDLKVLGIIDEIIPE 270 (322)
T ss_pred cCCCHHHHHhCCCCeEeccC
Confidence 36899999999999999984
No 105
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=86.62 E-value=2.9 Score=30.06 Aligned_cols=19 Identities=37% Similarity=0.517 Sum_probs=17.6
Q ss_pred ccCHHHHHhccccceecCC
Q 034158 5 PITAEQGERWGLVNHVVEE 23 (102)
Q Consensus 5 ~~~a~eA~~~Glv~~vv~~ 23 (102)
.++|.++++.|+||+|+|+
T Consensus 319 kitA~dL~~~GiID~II~E 337 (431)
T PLN03230 319 RITAAELVKLGVVDEIVPE 337 (431)
T ss_pred CCCHHHHHhCCCCeEeccC
Confidence 6899999999999999985
No 106
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=85.70 E-value=3.6 Score=28.45 Aligned_cols=19 Identities=32% Similarity=0.531 Sum_probs=17.4
Q ss_pred ccCHHHHHhccccceecCC
Q 034158 5 PITAEQGERWGLVNHVVEE 23 (102)
Q Consensus 5 ~~~a~eA~~~Glv~~vv~~ 23 (102)
.++|.++++.|+||.|+|+
T Consensus 249 ~~ta~~l~~~G~iD~II~e 267 (316)
T TIGR00513 249 KITAPDLKELGLIDSIIPE 267 (316)
T ss_pred cCCHHHHHHCCCCeEeccC
Confidence 5789999999999999984
No 107
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=83.27 E-value=5.4 Score=27.66 Aligned_cols=19 Identities=26% Similarity=0.559 Sum_probs=17.5
Q ss_pred ccCHHHHHhccccceecCC
Q 034158 5 PITAEQGERWGLVNHVVEE 23 (102)
Q Consensus 5 ~~~a~eA~~~Glv~~vv~~ 23 (102)
.+++.++.+.|+||+|+|+
T Consensus 249 ~ita~~l~~~g~iD~II~E 267 (319)
T PRK05724 249 KITAQDLKELGIIDEIIPE 267 (319)
T ss_pred CCCHHHHHHCCCceEeccC
Confidence 5899999999999999985
No 108
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=82.12 E-value=1 Score=30.99 Aligned_cols=29 Identities=24% Similarity=0.267 Sum_probs=23.0
Q ss_pred CCcccCHHHHHhccccceecCCchHHHHH
Q 034158 2 AATPITAEQGERWGLVNHVVEEGELLKKA 30 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a 30 (102)
+|+.+++++|++.||||++...++....+
T Consensus 241 ~g~v~~g~~A~~~gLVDelg~~~~av~~~ 269 (317)
T COG0616 241 TGRVWTGQQALELGLVDELGGLDDAVKDA 269 (317)
T ss_pred ccceecHHHhhhcCCchhcCCHHHHHHHH
Confidence 68999999999999999997754443333
No 109
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=81.75 E-value=4.9 Score=28.34 Aligned_cols=66 Identities=6% Similarity=0.009 Sum_probs=50.6
Q ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHhHHhhcCChhHHHHHHHHHhh
Q 034158 24 GELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEKERAHDYYNGMTKEQFKKMQEFIAA 92 (102)
Q Consensus 24 ~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~fl~k 92 (102)
..+++.+.+++..++..-|..+..++.-++......+...-..-..++.-.+ ..+...|+.+|.++
T Consensus 263 ~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 328 (360)
T TIGR03200 263 SLLDEAVEALCAKLLNTFPECLTKSIEELRKPKLFAWNQNKENSRAWLALNM---MNEARTGFRAFNEG 328 (360)
T ss_pred hHHHHHHHHHHHHHHHhchHHHHHHHHHhhhHHHHHHHhhhhhhHHHHHhhc---ccccchhhHHHhcc
Confidence 4578888889999999999999999999998866555554444445554433 58889999999874
No 110
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=81.39 E-value=2.2 Score=29.11 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=29.4
Q ss_pred CHHHHHhccccceecCCchHHHHHHHHHHHHHhcCH
Q 034158 7 TAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQ 42 (102)
Q Consensus 7 ~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~ 42 (102)
+++-+.+.|+||.|+++.++.....++...+...++
T Consensus 250 ~ae~~~~~G~vD~Vv~~~e~r~~l~~~L~~~~~~~~ 285 (292)
T PRK05654 250 RAEFLLEHGAIDMIVHRRELRDTLASLLALHTKQPA 285 (292)
T ss_pred CHHHHHhCCCCcEEECHHHHHHHHHHHHHHHhcCCC
Confidence 566678999999999999999888888887765543
No 111
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=80.72 E-value=2.8 Score=28.58 Aligned_cols=34 Identities=18% Similarity=0.176 Sum_probs=27.2
Q ss_pred CHHHHHhccccceecCCchHHHHHHHHHHHHHhc
Q 034158 7 TAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKN 40 (102)
Q Consensus 7 ~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~ 40 (102)
+|+-+.+.|+||.||+..++.....+++..+...
T Consensus 249 ~ae~~~~~G~vD~iv~~~~~r~~l~~~L~~~~~~ 282 (285)
T TIGR00515 249 TSEFLLEHGAIDMIVHRPEMKKTLASLLAKLQNL 282 (285)
T ss_pred CHHHHHhCCCCcEEECcHHHHHHHHHHHHHHhhC
Confidence 4555788999999999999988888887765443
No 112
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=76.96 E-value=10 Score=26.10 Aligned_cols=20 Identities=25% Similarity=0.469 Sum_probs=18.1
Q ss_pred cccCHHHHHhccccceecCC
Q 034158 4 TPITAEQGERWGLVNHVVEE 23 (102)
Q Consensus 4 ~~~~a~eA~~~Glv~~vv~~ 23 (102)
-.++|.+.+++||||.|+|+
T Consensus 247 mkita~dLk~lgiID~II~E 266 (317)
T COG0825 247 MKITAHDLKELGIIDGIIPE 266 (317)
T ss_pred cCCCHHHHHhCCCcceeccC
Confidence 46899999999999999985
No 113
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=75.40 E-value=11 Score=29.09 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=18.0
Q ss_pred cccCHHHHHhccccceecCC
Q 034158 4 TPITAEQGERWGLVNHVVEE 23 (102)
Q Consensus 4 ~~~~a~eA~~~Glv~~vv~~ 23 (102)
-.++|++.+++|+||.|+|+
T Consensus 339 lkiTa~dL~~lGiiD~IIpE 358 (762)
T PLN03229 339 LRITAQELCRLQIADGIIPE 358 (762)
T ss_pred cCCCHHHHHhCCCCeeeccC
Confidence 36899999999999999984
No 114
>PRK10949 protease 4; Provisional
Probab=73.77 E-value=3.1 Score=31.40 Aligned_cols=29 Identities=21% Similarity=0.093 Sum_probs=22.7
Q ss_pred ccCHHHHHhccccceecCCchHHHHHHHH
Q 034158 5 PITAEQGERWGLVNHVVEEGELLKKAHAV 33 (102)
Q Consensus 5 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~~ 33 (102)
..+|++|++.||||++...+++.....+.
T Consensus 270 ~~~a~~Al~~GLVD~l~~~de~~~~l~~~ 298 (618)
T PRK10949 270 GDTAKYALDNKLVDALASSAEIEKALTKA 298 (618)
T ss_pred CccHHHHHHCCCCCcCCCHHHHHHHHHHH
Confidence 45899999999999998877666555543
No 115
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=73.61 E-value=3 Score=31.18 Aligned_cols=28 Identities=21% Similarity=-0.044 Sum_probs=22.0
Q ss_pred cCHHHHHhccccceecCCchHHHHHHHH
Q 034158 6 ITAEQGERWGLVNHVVEEGELLKKAHAV 33 (102)
Q Consensus 6 ~~a~eA~~~Glv~~vv~~~~l~~~a~~~ 33 (102)
.+|++|++.||||++...+++.+...+.
T Consensus 252 ~~a~~A~~~gLVD~l~~~de~~~~l~~~ 279 (584)
T TIGR00705 252 DGARYALAEKLVTAVCSYAEAGKALKFL 279 (584)
T ss_pred chHHHHHHCCCcccCCCHHHHHHHHHHH
Confidence 4799999999999998877666555443
No 116
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=68.45 E-value=6.4 Score=26.11 Aligned_cols=20 Identities=15% Similarity=0.140 Sum_probs=16.3
Q ss_pred cCHHHHHhccccceecCCch
Q 034158 6 ITAEQGERWGLVNHVVEEGE 25 (102)
Q Consensus 6 ~~a~eA~~~Glv~~vv~~~~ 25 (102)
.++..+.++|+||.|+++.+
T Consensus 172 ~~~~~~~~~G~vd~vi~~~~ 191 (238)
T TIGR03134 172 PGIENFVKLGGVHALLDVAD 191 (238)
T ss_pred cCHHHHHhCCCccEEeCCCC
Confidence 45677899999999998644
No 117
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=67.57 E-value=6.1 Score=26.91 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=28.9
Q ss_pred CHHHHHhccccceecCCchHHHHHHHHHHHHHhcCH
Q 034158 7 TAEQGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQ 42 (102)
Q Consensus 7 ~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~ 42 (102)
.++--++.|+||.||+..++......+...+...++
T Consensus 251 ~aEfLlehG~iD~iv~R~elr~tla~ll~~~~~~~~ 286 (294)
T COG0777 251 TAEFLLEHGMIDMIVHRDELRTTLASLLAKLTPQPA 286 (294)
T ss_pred hHHHHHHcCCceeeecHHHHHHHHHHHHHHhCCCCC
Confidence 356678999999999998898888888777766544
No 118
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=59.29 E-value=13 Score=25.51 Aligned_cols=31 Identities=19% Similarity=0.048 Sum_probs=24.6
Q ss_pred CHHHHHhccccceecCCchHHHHHHHHHHHH
Q 034158 7 TAEQGERWGLVNHVVEEGELLKKAHAVAEAM 37 (102)
Q Consensus 7 ~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l 37 (102)
+|+-.++.|+||.||+..++......+..-+
T Consensus 263 ~ae~l~~~G~vD~iV~r~~lr~~l~~ll~~~ 293 (296)
T CHL00174 263 AAEYLFDKGLFDLIVPRNLLKGVLSELFQLH 293 (296)
T ss_pred cHHHHHhCcCceEEEcHHHHHHHHHHHHHhh
Confidence 3666889999999999988887777766543
No 119
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=56.14 E-value=18 Score=26.73 Aligned_cols=34 Identities=15% Similarity=0.142 Sum_probs=26.7
Q ss_pred cCHHHHHhccccceecCCchHHHHHHHHHHHHHh
Q 034158 6 ITAEQGERWGLVNHVVEEGELLKKAHAVAEAMIK 39 (102)
Q Consensus 6 ~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~ 39 (102)
.++..+.+.|+||.|+++.++..........+..
T Consensus 464 ~~~~~~a~~g~vD~VI~P~~tR~~l~~~l~~~~~ 497 (512)
T TIGR01117 464 ANPYKAAARGYVDDVIEPKQTRPKIVNALAMLES 497 (512)
T ss_pred cCHHHHHhcCCCCeeEChHHHHHHHHHHHHHHhc
Confidence 3577788999999999998888777777765543
No 120
>PF11524 SeleniumBinding: Selenium binding protein; InterPro: IPR021603 Selenium is an important nutrient which needs to be regulated since lack of the nutrient leads to cell abnormalities and high concentrations are toxic.SeBP regulates the level of free selenium in the cell by sequestering the nutrient during transport. SeBP acts as a pentamer and delivers the selenium to the selenophosphate synthetase enzyme []. Each subunit is composed of an alpha helix on top of a four stranded twisted ss sheet, stabilised by hydrogen bonds []. members of this entry are restricted to the archaeal Methanococcales.; PDB: 2JZ7_D.
Probab=53.78 E-value=9.5 Score=20.74 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=19.4
Q ss_pred CCcccCHHHHHhccccceecCC-chHHHHHHHHH
Q 034158 2 AATPITAEQGERWGLVNHVVEE-GELLKKAHAVA 34 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~~ 34 (102)
|...+++-|-+-+|+|++++.. +++.+...+.+
T Consensus 11 T~~eIPGiely~~gIvS~~~envd~li~~lee~v 44 (81)
T PF11524_consen 11 TTNEIPGIELYYLGIVSEASENVDELIKKLEEKV 44 (81)
T ss_dssp SSS--TTS--EEEEEEEEBSSSHHHHHHHHHHHH
T ss_pred EcCcCCCeEEEeehhHHHHHhhHHHHHHHHHHHH
Confidence 4556778888999999999984 44444444333
No 121
>COG1725 Predicted transcriptional regulators [Transcription]
Probab=48.95 E-value=15 Score=22.01 Aligned_cols=47 Identities=13% Similarity=0.232 Sum_probs=38.4
Q ss_pred HHHhccccceecCCchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhh
Q 034158 10 QGERWGLVNHVVEEGELLKKAHAVAEAMIKNNQDLVLRYKAVINDGL 56 (102)
Q Consensus 10 eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~ 56 (102)
+-...++++...++++-++.++++|..+.-+|..+.+.++.+-+.+.
T Consensus 18 ~qIk~~I~~g~l~pGdkLPSvRelA~~~~VNpnTv~raY~eLE~eG~ 64 (125)
T COG1725 18 NQIKEQIASGELKPGDKLPSVRELAKDLGVNPNTVQRAYQELEREGI 64 (125)
T ss_pred HHHHHHHHhCCcCCCCCCCcHHHHHHHhCCCHHHHHHHHHHHHHCCC
Confidence 34567788888888888899999999999888888888888766553
No 122
>PF08406 CbbQ_C: CbbQ/NirQ/NorQ C-terminal ; InterPro: IPR013615 This domain is found at the C terminus of proteins of the CbbQ/NirQ/NorQ family of proteins which play a role in the post-translational activation of Rubisco []. It is also found in the Thauera aromaticaTutH protein which is similar to the CbbQ/NirQ/NorQ family [], as well as in putative chaperones. The ATPase domain associated with various cellular activities (AAA) IPR011704 from INTERPRO is found in the same bacterial and archaeal proteins as the domain described here.
Probab=47.94 E-value=19 Score=19.93 Aligned_cols=25 Identities=12% Similarity=0.248 Sum_probs=10.7
Q ss_pred cCHHHHHhccccceecCCchHHHHH
Q 034158 6 ITAEQGERWGLVNHVVEEGELLKKA 30 (102)
Q Consensus 6 ~~a~eA~~~Glv~~vv~~~~l~~~a 30 (102)
+++.+|++..++.-+..+.++.+..
T Consensus 54 ~~~~~A~~~ai~~~Ltdd~~~~~al 78 (86)
T PF08406_consen 54 MDPRQACRAAIVEPLTDDPDVREAL 78 (86)
T ss_pred CCHHHHHHHHHhccCCCCHHHHHHH
Confidence 3444444444444444433333333
No 123
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=47.30 E-value=29 Score=20.82 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=18.0
Q ss_pred HHHHhccccceecCCchHHHHHHHHHHH
Q 034158 9 EQGERWGLVNHVVEEGELLKKAHAVAEA 36 (102)
Q Consensus 9 ~eA~~~Glv~~vv~~~~l~~~a~~~~~~ 36 (102)
+++.++| ++.|++++.-.+....++++
T Consensus 106 ~~l~~~G-~~~vf~~~~~~~~i~~~l~~ 132 (137)
T PRK02261 106 KKFKEMG-FDRVFPPGTDPEEAIDDLKK 132 (137)
T ss_pred HHHHHcC-CCEEECcCCCHHHHHHHHHH
Confidence 4789999 89999865444444444443
No 124
>COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
Probab=44.46 E-value=31 Score=22.78 Aligned_cols=30 Identities=17% Similarity=0.325 Sum_probs=22.1
Q ss_pred CHHHHHhccccceecCC---chHHHHHHHHHHH
Q 034158 7 TAEQGERWGLVNHVVEE---GELLKKAHAVAEA 36 (102)
Q Consensus 7 ~a~eA~~~Glv~~vv~~---~~l~~~a~~~~~~ 36 (102)
+-++|++.|.+|.++.+ +.|.++...+.+.
T Consensus 88 tI~~alr~Gv~DYLiKPf~~eRl~~aL~~y~~~ 120 (224)
T COG4565 88 TIKEALRYGVVDYLIKPFTFERLQQALTRYRQK 120 (224)
T ss_pred HHHHHHhcCchhheecceeHHHHHHHHHHHHHH
Confidence 35799999999999865 5566666666533
No 125
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=44.10 E-value=35 Score=21.48 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=22.1
Q ss_pred ccCHHHHHhccccceecCCchHHHHHHHHHH
Q 034158 5 PITAEQGERWGLVNHVVEEGELLKKAHAVAE 35 (102)
Q Consensus 5 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~~ 35 (102)
.-+|-+|.++|-.+++..+.+.+.-...+.+
T Consensus 93 IATAV~AvKlGA~~YLaKPAdaDdi~aAl~~ 123 (182)
T COG4567 93 IATAVEAVKLGACDYLAKPADADDILAALLR 123 (182)
T ss_pred HHHHHHHHHhhhhhhcCCCCChHHHHHHHhh
Confidence 4468899999999999977655544444443
No 126
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=42.71 E-value=68 Score=22.12 Aligned_cols=36 Identities=8% Similarity=0.116 Sum_probs=29.8
Q ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhcCC
Q 034158 24 GELLKKAHAVAEAMIKNNQDLVLRYKAVINDGLKLD 59 (102)
Q Consensus 24 ~~l~~~a~~~~~~l~~~~~~a~~~~K~~i~~~~~~~ 59 (102)
+.+.+.|.++++++....|.-...++++++..|..+
T Consensus 237 ~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 237 DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 346788999999999999998888889998887644
No 127
>PF09425 CCT_2: Divergent CCT motif; InterPro: IPR018467 The short CCT (CO, COL, TOC1) motif is found in a number of plant proteins, including Constans (CO), Constans-like (COL) and TOC1. The CCT motif is about 45 amino acids long and contains a putative nuclear localisation signal within the second half of the CCT motif []. The CCT motif is found in the Arabidopsis circadian rhythm protein TOC1, an autoregulatory response regulator homologue the controls the photoperiodic flowering through its clock function []. ; GO: 0005515 protein binding; PDB: 3OGK_V 3OGL_S 3OGM_W.
Probab=41.70 E-value=21 Score=15.41 Aligned_cols=15 Identities=20% Similarity=0.392 Sum_probs=8.2
Q ss_pred HHHHHHHHhhcCCCC
Q 034158 83 FKKMQEFIAARSSKK 97 (102)
Q Consensus 83 ~~~i~~fl~k~~~~~ 97 (102)
+..++.|++|++...
T Consensus 5 K~SLqRFLeKRK~R~ 19 (27)
T PF09425_consen 5 KASLQRFLEKRKDRL 19 (27)
T ss_dssp -HHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHhh
Confidence 456789999887544
No 128
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=35.76 E-value=51 Score=19.88 Aligned_cols=25 Identities=16% Similarity=0.112 Sum_probs=16.6
Q ss_pred HHHhccccceecCCchHHHHHHHHHH
Q 034158 10 QGERWGLVNHVVEEGELLKKAHAVAE 35 (102)
Q Consensus 10 eA~~~Glv~~vv~~~~l~~~a~~~~~ 35 (102)
++.++| ++.+++++.-.+...++++
T Consensus 105 ~l~~~G-v~~vF~pgt~~~~iv~~l~ 129 (134)
T TIGR01501 105 RFKEMG-FDRVFAPGTPPEVVIADLK 129 (134)
T ss_pred HHHHcC-CCEEECcCCCHHHHHHHHH
Confidence 478999 7999987544444444443
No 129
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=35.54 E-value=23 Score=25.27 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=23.5
Q ss_pred CcccCHHHHHhccccceecCC--chHHHHHHHHH
Q 034158 3 ATPITAEQGERWGLVNHVVEE--GELLKKAHAVA 34 (102)
Q Consensus 3 g~~~~a~eA~~~Glv~~vv~~--~~l~~~a~~~~ 34 (102)
+.-++..||+.-|+++++.|. +++........
T Consensus 220 ~~gfdv~eal~~gl~~~~~~r~~eel~~~~~~g~ 253 (380)
T KOG1683|consen 220 GVGFDVAEALAVGLGDEIGPRIEEELLEKGRAGI 253 (380)
T ss_pred ccCccHHHHHhhccchhccchhHHHHHHHHhhhh
Confidence 567899999999999999994 44444444443
No 130
>PF13395 HNH_4: HNH endonuclease
Probab=33.85 E-value=27 Score=17.30 Aligned_cols=24 Identities=17% Similarity=0.270 Sum_probs=16.5
Q ss_pred CCCcccCHHHHHhc-cccceecCCc
Q 034158 1 MAATPITAEQGERW-GLVNHVVEEG 24 (102)
Q Consensus 1 ltg~~~~a~eA~~~-Glv~~vv~~~ 24 (102)
++|+.|+..+...- -=||+++|-.
T Consensus 3 Y~g~~i~~~~l~~~~~~iDHiiP~s 27 (54)
T PF13395_consen 3 YCGKPISIENLFKNKYEIDHIIPRS 27 (54)
T ss_pred CCCCCCChhhcccCCceeEEEeccc
Confidence 57888888876542 2378888853
No 131
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=33.82 E-value=26 Score=24.02 Aligned_cols=21 Identities=33% Similarity=0.488 Sum_probs=16.3
Q ss_pred CCcccCHHHHHhccc-cceecC
Q 034158 2 AATPITAEQGERWGL-VNHVVE 22 (102)
Q Consensus 2 tg~~~~a~eA~~~Gl-v~~vv~ 22 (102)
.+.+++++||.++|| |+.-+|
T Consensus 227 Hdypi~~eea~~lGL~V~t~~p 248 (285)
T PF01972_consen 227 HDYPITVEEAKELGLPVSTDMP 248 (285)
T ss_pred CCCCCCHHHHHHcCCCcCCCCc
Confidence 467899999999999 544444
No 132
>PRK12555 chemotaxis-specific methylesterase; Provisional
Probab=32.34 E-value=36 Score=23.33 Aligned_cols=23 Identities=9% Similarity=0.166 Sum_probs=17.7
Q ss_pred HHHHHhccccceecCCchHHHHH
Q 034158 8 AEQGERWGLVNHVVEEGELLKKA 30 (102)
Q Consensus 8 a~eA~~~Glv~~vv~~~~l~~~a 30 (102)
++.|.+.|.+|+|.|.+++-...
T Consensus 310 p~~a~~~g~~~~vl~~~~i~~~l 332 (337)
T PRK12555 310 PKAAAALGAASEVLPLERIAPRL 332 (337)
T ss_pred hHHHHhcCCCcEEecHHHHHHHH
Confidence 46789999999999987654433
No 133
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=30.55 E-value=1.4e+02 Score=20.33 Aligned_cols=20 Identities=15% Similarity=0.092 Sum_probs=15.9
Q ss_pred ccCHHHHHhccccceecCCc
Q 034158 5 PITAEQGERWGLVNHVVEEG 24 (102)
Q Consensus 5 ~~~a~eA~~~Glv~~vv~~~ 24 (102)
.+.+......|++|.+++++
T Consensus 199 ~lGG~~~~~sG~~D~~v~dd 218 (274)
T TIGR03133 199 TTGGKHRFLSGDADVLVEDD 218 (274)
T ss_pred ccchHhHhhcccceEEeCCH
Confidence 35566778899999999974
No 134
>PRK13848 conjugal transfer protein TraC; Provisional
Probab=30.42 E-value=93 Score=17.67 Aligned_cols=31 Identities=23% Similarity=0.178 Sum_probs=21.8
Q ss_pred HHHHhccccceecCCchHHHHHHHHHHHHHh
Q 034158 9 EQGERWGLVNHVVEEGELLKKAHAVAEAMIK 39 (102)
Q Consensus 9 ~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~ 39 (102)
.-|++.||..-=+++++|.....+++.++..
T Consensus 32 RiAlKAGLgeieI~d~eL~~aFeeiAaRFR~ 62 (98)
T PRK13848 32 RIALKAGLGEIEIEEAELQAAFEELAKRFRG 62 (98)
T ss_pred HHHHHcCccccccCHHHHHHHHHHHHHHHhc
Confidence 3466777777667777777777777777644
No 135
>PF07820 TraC: TraC-like protein; InterPro: IPR012930 The members of this family are sequences that are similar to TraC (Q84HT8 from SWISSPROT) from Rhizobium etli. The gene encoding this protein is one of a group of genes found on plasmid p42a of Rhizobium etli (strain CFN 42/ATCC 51251) that are thought to be involved in the process of plasmid self-transmission. Mobilisation of plasmid p42a is of importance as it is required for transfer of plasmid p42d, the symbiotic plasmid which carries most of the genes required for nodulation and nitrogen fixation by this symbiotic bacterium. The predicted protein products of p42a are similar to known transfer proteins of Agrobacterium tumefaciens plasmid pTiC58 []. ; GO: 0000746 conjugation
Probab=30.38 E-value=95 Score=17.57 Aligned_cols=32 Identities=19% Similarity=0.178 Sum_probs=23.5
Q ss_pred HHHHhccccceecCCchHHHHHHHHHHHHHhc
Q 034158 9 EQGERWGLVNHVVEEGELLKKAHAVAEAMIKN 40 (102)
Q Consensus 9 ~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~~ 40 (102)
.-|++.||..--+++++|.....+++.++...
T Consensus 31 r~AlKaGL~eieI~d~eL~~~FeeIa~RFrk~ 62 (92)
T PF07820_consen 31 RIALKAGLGEIEISDAELQAAFEEIAARFRKG 62 (92)
T ss_pred HHHHHcccccccCCHHHHHHHHHHHHHHHhcc
Confidence 34677788777778888888888888777543
No 136
>PF13963 Transpos_assoc: Transposase-associated domain
Probab=30.06 E-value=59 Score=17.39 Aligned_cols=14 Identities=29% Similarity=0.551 Sum_probs=12.5
Q ss_pred CChhHHHHHHHHHh
Q 034158 78 MTKEQFKKMQEFIA 91 (102)
Q Consensus 78 ~~~~~~~~i~~fl~ 91 (102)
.+++..+|+..|++
T Consensus 13 ~s~ey~~Gv~~Fi~ 26 (77)
T PF13963_consen 13 FSPEYIEGVEEFID 26 (77)
T ss_pred CCHHHHHHHHHHHH
Confidence 48999999999985
No 137
>PF05195 AMP_N: Aminopeptidase P, N-terminal domain; InterPro: IPR007865 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This N-terminal domain is associated with N-terminal region of aminopeptidase P (X-Pro aminopeptidase I and II, 3.4.11.9 from EC) and related sequences. It is not found associated with methionyl aminopeptidase 1 (IPR002467 from INTERPRO) or methionyl aminopeptidase 2 (IPR002468 from INTERPRO) families. The domain is structurally very similar [] to the creatinase N-terminal domain (IPR000587 from INTERPRO), however, little or no sequence similarity exists between the two domains. The sequences belong to MEROPS peptidase family M24B, clan MG.; GO: 0004177 aminopeptidase activity, 0030145 manganese ion binding; PDB: 3IG4_B 2OKN_A 2IW2_B 1WBQ_A 2BH3_A 1WLR_A 2V3Z_A 1W2M_B 2BWT_A 2BWW_A ....
Probab=29.40 E-value=57 Score=19.40 Aligned_cols=33 Identities=15% Similarity=-0.000 Sum_probs=22.2
Q ss_pred CCcccCHHHHHhccccceecCCchHHHHHHHHH
Q 034158 2 AATPITAEQGERWGLVNHVVEEGELLKKAHAVA 34 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~~ 34 (102)
.|.+.+.++|.+.==||+|.+-+++.....+++
T Consensus 85 ~G~~~~~e~a~~~~gvd~v~~~~~l~~~l~~~~ 117 (134)
T PF05195_consen 85 DGPRPGPEEAKEIYGVDEVYYIDELEEVLSELL 117 (134)
T ss_dssp CSS--HHHHHHHHHT-SEEEEGGGHHHHHHHHH
T ss_pred CccCCCHHHHHHHhCCCEEEEHHHHHHHHHHHH
Confidence 578888999965545899999888776665543
No 138
>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]
Probab=29.39 E-value=1.1e+02 Score=21.83 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=27.5
Q ss_pred cccCHHHHHhccccceecCC---chHHHHHHHHHHHHHh
Q 034158 4 TPITAEQGERWGLVNHVVEE---GELLKKAHAVAEAMIK 39 (102)
Q Consensus 4 ~~~~a~eA~~~Glv~~vv~~---~~l~~~a~~~~~~l~~ 39 (102)
-.++|.|+.+.|++|-+.++ ..|+..+..++..-..
T Consensus 282 GNvsA~ela~~glLDiLsSDY~P~SLl~A~F~La~~~~~ 320 (377)
T COG3454 282 GNVSARELAQHGLLDILSSDYVPASLLHAAFRLADLGSN 320 (377)
T ss_pred cchhHHHHHhCCceeeecccCCcHHHHHHHHHHhhhhcc
Confidence 36899999999999988764 4677777777665544
No 139
>PF12354 Internalin_N: Bacterial adhesion/invasion protein N terminal; PDB: 2OMT_A 1H6U_A 3RFS_A 3RFJ_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=28.78 E-value=30 Score=17.66 Aligned_cols=12 Identities=17% Similarity=0.443 Sum_probs=8.5
Q ss_pred cceecCCchHHH
Q 034158 17 VNHVVEEGELLK 28 (102)
Q Consensus 17 v~~vv~~~~l~~ 28 (102)
|++++|++.|-+
T Consensus 42 InqIFPD~~LAe 53 (57)
T PF12354_consen 42 INQIFPDPALAE 53 (57)
T ss_dssp HHHHSSSHHHHH
T ss_pred hhhhcCCHHHHH
Confidence 678888876643
No 140
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=28.63 E-value=60 Score=22.98 Aligned_cols=27 Identities=19% Similarity=0.263 Sum_probs=20.4
Q ss_pred HHHHHhccccceecCCchHHHHHHHHH
Q 034158 8 AEQGERWGLVNHVVEEGELLKKAHAVA 34 (102)
Q Consensus 8 a~eA~~~Glv~~vv~~~~l~~~a~~~~ 34 (102)
+..|.+.|.++.+.|.+++-+...++.
T Consensus 317 P~aai~~g~~~~v~pl~~i~~~i~~~~ 343 (350)
T COG2201 317 PKAAIEAGLVDEVLPLEEIAEEIVKIV 343 (350)
T ss_pred HHHHHhcCCCcccCCHHHHHHHHHHHH
Confidence 578999999999999776655544444
No 141
>PF01407 Gemini_AL3: Geminivirus AL3 protein; InterPro: IPR000657 Geminiviruses are characterised by a genome of circular single-stranded DNA encapsidated in twinned (geminate) quasi-isometric particles, from which the group derives its name []. Most geminiviruses can be divided into two subgroups on the basis of host range and/or insect vector: i.e. those that infect dicotyledenous plants and are transmitted by the same whitefly species, and those that infect monocotyledenous plants and are transmitted by different leafhopper vectors. The genomes of the whitefly-transmitted African cassava mosaic virus, Tomato golden mosaic virus (TGMV) and Bean golden mosaic virus (BGMV) possess a bipartite genome. By contrast, only a single DNA component has been identified for the leafhopper-transmitted Maize streak virus (MSV) and Wheat dwarf virus (WDV) [, ]. Beet curly top virus (BCTV), and Tobacco yellow dwarf virus belong to a third possible subgroup. Like MSV and WDV, BCTV is transmitted by a specific leafhopper species, yet like the whitefly-transmitted geminiviruses it has a host range confined to dicotyledenous plants. Sequence comparison of the whitefly-transmitted Squash leaf curl virus (SqLCV) and Tomato yellow leaf curl virus (TYLCV) with the genomic components of TGMV and BGMV reveals a close evolutionary relationship [, , ]. Amino acid sequence alignments of Potato yellow mosaic virus (PYMV) proteins with those encoded by other geminiviruses show that PYMV is closely related to geminiviruses isolated from the New World, especially in the putative coat protein gene regions []. Comparison of MSV DNA-encoded proteins with those of other geminiviruses infecting monocotyledonous plants, including Panicum streak virus [] and Miscanthus streak virus (MiSV) [], reveal high levels of similarity. Geminiviruses contain three ORFs (designated AL1, AL2, and AL3) that overlap and are specified by multiple polycistronic mRNAs. The AL3 protein comprises approximately 0.05% of the cellular proteins and is present in the soluble and organelle fractions []. AL3 may form oligomers []. Immunoprecipitation of AL3 in a baculovirus expression system extracts expressing both AL1 and AL3 showed that the two proteins also complex with each other. The AL3 protein is involved in viral replication. ; GO: 0016032 viral reproduction
Probab=28.05 E-value=28 Score=20.68 Aligned_cols=20 Identities=35% Similarity=0.315 Sum_probs=15.0
Q ss_pred CCcccCHHHHHhccccceec
Q 034158 2 AATPITAEQGERWGLVNHVV 21 (102)
Q Consensus 2 tg~~~~a~eA~~~Glv~~vv 21 (102)
||++++|.+|..-=++.+|-
T Consensus 4 TGE~ITaaQa~ngvyiWev~ 23 (120)
T PF01407_consen 4 TGEPITAAQAENGVYIWEVP 23 (120)
T ss_pred CCchhhHHHhcCceeEEEcC
Confidence 79999999998754556653
No 142
>PRK00742 chemotaxis-specific methylesterase; Provisional
Probab=26.66 E-value=74 Score=21.93 Aligned_cols=25 Identities=12% Similarity=0.181 Sum_probs=18.9
Q ss_pred HHHHHhccccceecCCchHHHHHHH
Q 034158 8 AEQGERWGLVNHVVEEGELLKKAHA 32 (102)
Q Consensus 8 a~eA~~~Glv~~vv~~~~l~~~a~~ 32 (102)
++.|.+.|.+|.|.|.+++-....+
T Consensus 324 p~~a~~~~~~~~vl~~~~i~~~l~~ 348 (354)
T PRK00742 324 PKAAIEAGAVDEVLPLDQIAERILK 348 (354)
T ss_pred HHHHHHcCCCcEEecHHHHHHHHHH
Confidence 4678899999999998766544443
No 143
>PF11007 CotJA: Spore coat associated protein JA (CotJA); InterPro: IPR020256 cotJA is part of the cotJ operon, which encodes spore coat proteins. Interaction of CotJA with CotJC is required for the assembly of both CotJA and CotJC into the spore coat [].
Probab=26.23 E-value=62 Score=14.86 Aligned_cols=15 Identities=13% Similarity=0.218 Sum_probs=12.0
Q ss_pred CcccCHHHHHhcccc
Q 034158 3 ATPITAEQGERWGLV 17 (102)
Q Consensus 3 g~~~~a~eA~~~Glv 17 (102)
+..++.++|+..|=|
T Consensus 14 ~~~y~~~eaL~~GTi 28 (36)
T PF11007_consen 14 EPIYPPEEALKRGTI 28 (36)
T ss_pred CCCcCHHHHHhcCCc
Confidence 467899999999954
No 144
>PF00191 Annexin: Annexin; InterPro: IPR018502 The annexins (or lipocortins) are a family of proteins that bind to phospholipids in a calcium-dependent manner []. They are distributed ubiquitously in different tissues and cell types of higher and lower eukaryotes, including mammals, fish, birds, Drosophila melanogaster (Fruit fly), Xenopus laevis (African clawed frog), Caenorhabditis elegans , Dictyostelium discoideum (Slime mold) and Neurospora crassa [, ]. Annexins are absent from yeasts and prokaryotes []. The plant annexins are somewhat distinct from those found in other taxa []. Most eukaryotic species have 1-20 annexin (ANX) genes. All annexins share a core domain made up of four similar repeats, each approximately 70 amino acids long []. Each individual annexin repeat (sometimes referred to as endonexin folds) is folded into five alpha-helices, and in turn are wound into a right-handed super-helix; they usually contain a characteristic 'type 2' motif for binding calcium ions with the sequence 'GxGT-[38 residues]-D/E'. Animal and fungal annexins also have variable amino-terminal domains. The core domains of most vertebrate annexins have been analysed by X-ray crystallography, revealing conservation of their secondary and tertiary structures despite only 45-55% amino-acid identity among individual members. The four repeats pack into a structure that resembles a flattened disc, with a slightly convex surface on which the Ca 2+ -binding loops are located and a concave surface at which the amino and carboxyl termini come into close apposition. Annexins are traditionally thought of as calcium-dependent phospholipid-binding proteins, but recent work suggests a more complex set of functions. The famiy has been linked with inhibition of phospholipase activity, exocytosis and endoctyosis, signal transduction, organisation of the extracellular matrix, resistance to reactive oxygen species and DNA replication [].; GO: 0005509 calcium ion binding, 0005544 calcium-dependent phospholipid binding; PDB: 1N44_A 1BC1_A 2IE6_A 2H0M_A 1A8B_A 2H0K_A 1BCW_A 1BCZ_A 1N42_A 1BC0_A ....
Probab=25.29 E-value=1e+02 Score=15.36 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=28.5
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhhhcCCHHHHHHHHH
Q 034158 33 VAEAMIKNNQDLVLRYKAVINDGLKLDLGHALALEK 68 (102)
Q Consensus 33 ~~~~l~~~~~~a~~~~K~~i~~~~~~~~~~~~~~e~ 68 (102)
+++-+...++.-+..++.........++.+.+..|.
T Consensus 20 li~Il~~rs~~ql~~i~~~Y~~~~g~~L~~~i~~e~ 55 (66)
T PF00191_consen 20 LIEILCTRSPAQLRAIKQAYKKKYGKDLEEDIKKET 55 (66)
T ss_dssp HHHHHHHSTHHHHHHHHHHHHHHHSS-HHHHHHHHS
T ss_pred hhhHHhhhcccccceeehhhhhhhHHHHHHHHHHhC
Confidence 566777889999999999999888889888777553
No 145
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=23.33 E-value=1.2e+02 Score=23.01 Aligned_cols=33 Identities=6% Similarity=-0.026 Sum_probs=22.4
Q ss_pred CHHHHHhccccceecCCchHHHHHHHHHHHHHh
Q 034158 7 TAEQGERWGLVNHVVEEGELLKKAHAVAEAMIK 39 (102)
Q Consensus 7 ~a~eA~~~Glv~~vv~~~~l~~~a~~~~~~l~~ 39 (102)
++-.|-+.|+||.|+++.+..............
T Consensus 524 ~p~~aa~~~~vD~VIdP~dTR~~l~~~l~~~~~ 556 (569)
T PLN02820 524 NPYYSTARLWDDGVIDPADTRRVLGLCLSAALN 556 (569)
T ss_pred CHHHHHHcCCcCcccCHHHHHHHHHHHHHHhhc
Confidence 455577889999999887766665555544433
No 146
>COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]
Probab=21.75 E-value=1.3e+02 Score=22.28 Aligned_cols=33 Identities=12% Similarity=0.252 Sum_probs=26.2
Q ss_pred HHHHHhccccceecCC---chHHHHHHHHHHHHHhc
Q 034158 8 AEQGERWGLVNHVVEE---GELLKKAHAVAEAMIKN 40 (102)
Q Consensus 8 a~eA~~~Glv~~vv~~---~~l~~~a~~~~~~l~~~ 40 (102)
|..|.++|..|.+..+ ++|.+...++...|-..
T Consensus 91 ak~Am~lGV~dYLLKP~~k~eL~~~L~ki~~kl~~~ 126 (475)
T COG4753 91 AKKAMKLGVKDYLLKPVDKAELEEALKKIIGKLEEQ 126 (475)
T ss_pred HHHHHhcCchhheeCcCCHHHHHHHHHHHHHHHHHH
Confidence 6889999999999854 56888888888777543
No 147
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=21.56 E-value=71 Score=15.17 Aligned_cols=14 Identities=36% Similarity=0.674 Sum_probs=10.0
Q ss_pred HHHhccccceecCCc
Q 034158 10 QGERWGLVNHVVEEG 24 (102)
Q Consensus 10 eA~~~Glv~~vv~~~ 24 (102)
.|.+.|++ +|+|+.
T Consensus 25 ~~~~yGi~-KIvPP~ 38 (42)
T smart00545 25 QAEKYGIC-KVVPPK 38 (42)
T ss_pred HHhhCCEE-EEECCC
Confidence 58889988 566553
No 148
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=21.53 E-value=68 Score=23.46 Aligned_cols=20 Identities=25% Similarity=0.499 Sum_probs=17.4
Q ss_pred cccCHHHHHhccccceecCC
Q 034158 4 TPITAEQGERWGLVNHVVEE 23 (102)
Q Consensus 4 ~~~~a~eA~~~Glv~~vv~~ 23 (102)
..++++||++.|++|-+..+
T Consensus 169 ~~l~a~eA~~~~vid~iA~~ 188 (436)
T COG1030 169 LSLTAEEALRQGVIDLIARD 188 (436)
T ss_pred cCCChhHHHhcCccccccCC
Confidence 46899999999999988765
Done!