Your job contains 1 sequence.
>034169
MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA
IDRFNDLVVSVYVTAGHDLCYFTTLGMMMGSRAFSKRSMSSI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034169
(102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198983 - symbol:AT1G80500 "AT1G80500" species... 365 1.5e-33 1
UNIPROTKB|G1K394 - symbol:TRAPPC2 "Trafficking protein pa... 186 1.4e-14 1
UNIPROTKB|G5EA75 - symbol:TRAPPC2 "Trafficking protein pa... 185 1.8e-14 1
UNIPROTKB|Q3T0F2 - symbol:TRAPPC2 "Trafficking protein pa... 178 1.0e-13 1
UNIPROTKB|E2QV03 - symbol:TRAPPC2 "Trafficking protein pa... 178 1.0e-13 1
UNIPROTKB|F5H785 - symbol:TRAPPC2 "Trafficking protein pa... 178 1.0e-13 1
UNIPROTKB|P0DI81 - symbol:TRAPPC2 "Trafficking protein pa... 178 1.0e-13 1
UNIPROTKB|P0DI82 - symbol:TRAPPC2P1 "Trafficking protein ... 178 1.0e-13 1
UNIPROTKB|F1SRI0 - symbol:TRAPPC2 "Trafficking protein pa... 178 1.0e-13 1
RGD|1306925 - symbol:Trappc2 "trafficking protein particl... 177 1.3e-13 1
FB|FBgn0263604 - symbol:l(3)72Dh "lethal (3) 72Dh" specie... 174 2.7e-13 1
ZFIN|ZDB-GENE-060929-1266 - symbol:trappc2 "trafficking p... 174 2.7e-13 1
RGD|6499350 - symbol:LOC100910318 "trafficking protein pa... 170 7.1e-13 1
DICTYBASE|DDB_G0282887 - symbol:trappc2 "trafficking prot... 168 1.2e-12 1
POMBASE|SPBC11G11.04 - symbol:trs20 "TRAPP complex subuni... 158 1.3e-11 1
UNIPROTKB|Q5ZKP4 - symbol:TRAPPC2 "Trafficking protein pa... 152 5.8e-11 1
UNIPROTKB|E5RFG0 - symbol:TRAPPC2 "Trafficking protein pa... 148 1.5e-10 1
WB|WBGene00021046 - symbol:sedl-1 species:6239 "Caenorhab... 137 2.2e-09 1
UNIPROTKB|O02173 - symbol:sedl-1 "Probable trafficking pr... 137 2.2e-09 1
SGD|S000000458 - symbol:TRS20 "Subunit of the transport p... 101 3.9e-08 2
ASPGD|ASPL0000007051 - symbol:AN11500 species:162425 "Eme... 94 0.00019 1
>TAIR|locus:2198983 [details] [associations]
symbol:AT1G80500 "AT1G80500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 EMBL:CP002684 GO:GO:0005622
GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP PANTHER:PTHR12403
IPI:IPI00548390 RefSeq:NP_178165.2 UniGene:At.43306
ProteinModelPortal:F4HTY0 SMR:F4HTY0 PRIDE:F4HTY0
EnsemblPlants:AT1G80500.1 GeneID:844389 KEGG:ath:AT1G80500
Uniprot:F4HTY0
Length = 135
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 70/77 (90%), Positives = 74/77 (96%)
Query: 1 MATTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKA 60
MA TACFIIV RN+IPIYEAEVGSA KREDAAQLHQFILHAALD+VQDLAWTTSAMFLK+
Sbjct: 1 MANTACFIIVGRNDIPIYEAEVGSAAKREDAAQLHQFILHAALDVVQDLAWTTSAMFLKS 60
Query: 61 IDRFNDLVVSVYVTAGH 77
+DRFNDLVVSVYVTAGH
Sbjct: 61 VDRFNDLVVSVYVTAGH 77
>UNIPROTKB|G1K394 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403
ProteinModelPortal:G1K394 SMR:G1K394 PRIDE:G1K394
Ensembl:ENST00000453655 ArrayExpress:G1K394 Bgee:G1K394
Uniprot:G1K394
Length = 147
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 36/92 (39%), Positives = 58/92 (63%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHDLCYFTTLGMMM 89
LK +D+FN+ VS +VTAGH L + + +M
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHILTFLVKMRFIM 92
>UNIPROTKB|G5EA75 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356
OMA:VGHNDNP PANTHER:PTHR12403 GeneTree:ENSGT00510000047168
EMBL:CU633939 Ensembl:ENSSSCT00000013263 Uniprot:G5EA75
Length = 144
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGHDLCY 81
LK +D+FN+ VS +VTAGH L Y
Sbjct: 61 LKTVDKFNEWFVSAFVTAGHILIY 84
>UNIPROTKB|Q3T0F2 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9913 "Bos taurus" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
EMBL:BC102418 IPI:IPI00696352 RefSeq:NP_001029968.1
UniGene:Bt.13900 ProteinModelPortal:Q3T0F2 SMR:Q3T0F2 STRING:Q3T0F2
PRIDE:Q3T0F2 Ensembl:ENSBTAT00000014509 GeneID:616748
KEGG:bta:616748 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 InParanoid:Q3T0F2
OrthoDB:EOG49GKHT NextBio:20900300 Uniprot:Q3T0F2
Length = 140
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>UNIPROTKB|E2QV03 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9615 "Canis lupus familiaris" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 PANTHER:PTHR12403 Uniprot:E2QV03
Length = 140
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>UNIPROTKB|F5H785 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403 IPI:IPI00979652
ProteinModelPortal:F5H785 SMR:F5H785 Ensembl:ENST00000519885
ArrayExpress:F5H785 Bgee:F5H785 Uniprot:F5H785
Length = 113
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>UNIPROTKB|P0DI81 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0044325 "ion channel binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0006355
GO:GO:0006351 GO:GO:0001501 GO:GO:0006888 SUPFAM:SSF64356
EMBL:AC003037 EMBL:AF157065 EMBL:AF157062 EMBL:AF157063
EMBL:AF157064 EMBL:AK310542 EMBL:DA542477 EMBL:DB101396
EMBL:BC016915 EMBL:BC052618 IPI:IPI00005119 IPI:IPI00940542
IPI:IPI01025157 RefSeq:NP_001011658.1 RefSeq:NP_001122307.2
RefSeq:NP_055378.1 UniGene:Hs.592238 UniGene:Hs.622292
ProteinModelPortal:P0DI81 SMR:P0DI81 IntAct:P0DI81 PRIDE:P0DI81
DNASU:6399 Ensembl:ENST00000358231 Ensembl:ENST00000359680
Ensembl:ENST00000380579 Ensembl:ENST00000419678
Ensembl:ENST00000458511 GeneID:6399 KEGG:hsa:6399 UCSC:uc010nem.2
UCSC:uc022btf.1 CTD:6399 GeneCards:GC0XM013640 HGNC:HGNC:23068
HPA:CAB004665 MIM:300202 MIM:313400 neXtProt:NX_P0DI81 OMA:VGHNDNP
ChiTaRS:TRAPPC2 GenomeRNAi:6399 NextBio:24860 ArrayExpress:P0DI81
Bgee:P0DI81 CleanEx:HS_TRAPPC2 Genevestigator:O14582
GermOnline:ENSG00000196459 PANTHER:PTHR12403 Uniprot:P0DI81
Length = 140
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>UNIPROTKB|P0DI82 [details] [associations]
symbol:TRAPPC2P1 "Trafficking protein particle complex
subunit 2 protein TRAPPC2P1" species:9606 "Homo sapiens"
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005634 GO:GO:0005794 GO:GO:0048471
GO:GO:0006351 GO:GO:0006888 SUPFAM:SSF64356 IPI:IPI00005119
RefSeq:NP_001011658.1 RefSeq:NP_055378.1 UniGene:Hs.592238
UniGene:Hs.622292 DNASU:6399 GeneID:6399 KEGG:hsa:6399 CTD:6399
HPA:CAB004665 GenomeRNAi:6399 NextBio:24860 CleanEx:HS_TRAPPC2
PANTHER:PTHR12403 EMBL:AF291676 EMBL:AF058918 EMBL:AC003002
EMBL:BC008889 EMBL:BC032809 UniGene:Hs.446620
ProteinModelPortal:P0DI82 SMR:P0DI82 STRING:O14582 PRIDE:P0DI82
Ensembl:ENST00000543226 GeneCards:GC19P057874 HGNC:HGNC:10710
neXtProt:NX_P0DI82 ArrayExpress:P0DI82 Bgee:P0DI82 Uniprot:P0DI82
Length = 140
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>UNIPROTKB|F1SRI0 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9823 "Sus scrofa" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0006351 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403
GeneTree:ENSGT00510000047168 EMBL:AY610478 EMBL:AK344004
EMBL:CU633939 RefSeq:NP_001231738.1 UniGene:Ssc.8205
ProteinModelPortal:F1SRI0 SMR:F1SRI0 PRIDE:F1SRI0
Ensembl:ENSSSCT00000033348 Ensembl:ENSSSCT00000034259
GeneID:100513447 KEGG:ssc:100513447 Uniprot:F1SRI0
Length = 140
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>RGD|1306925 [details] [associations]
symbol:Trappc2 "trafficking protein particle complex 2"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0030008 "TRAPP
complex" evidence=ISO] [GO:0044325 "ion channel binding"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
RGD:1306925 GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 CTD:6399
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 HOVERGEN:HBG006717 OrthoDB:EOG49GKHT
EMBL:CH474014 EMBL:BC091429 IPI:IPI00212787 RefSeq:NP_001020136.1
UniGene:Rn.8274 SMR:Q5BJL8 STRING:Q5BJL8 Ensembl:ENSRNOT00000068113
GeneID:501550 KEGG:rno:501550 UCSC:RGD:1306925 InParanoid:Q5BJL8
NextBio:709167 Genevestigator:Q5BJL8 Uniprot:Q5BJL8
Length = 140
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAEV---GSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>FB|FBgn0263604 [details] [associations]
symbol:l(3)72Dh "lethal (3) 72Dh" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IGI] [GO:0033227 "dsRNA transport"
evidence=IMP] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 EMBL:AE014296
GO:GO:0006888 GO:GO:0033227 SUPFAM:SSF64356 GO:GO:0007224
OMA:VGHNDNP PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HSSP:Q9CQP2 EMBL:AY071561
RefSeq:NP_648841.1 UniGene:Dm.18901 ProteinModelPortal:Q9VUZ1
IntAct:Q9VUZ1 MINT:MINT-822446 STRING:Q9VUZ1 PaxDb:Q9VUZ1
EnsemblMetazoa:FBtr0075491 GeneID:39769 KEGG:dme:Dmel_CG5161
UCSC:CG5161-RA FlyBase:FBgn0036573 InParanoid:Q9VUZ1
OrthoDB:EOG43BK56 PhylomeDB:Q9VUZ1 GenomeRNAi:39769 NextBio:815287
Bgee:Q9VUZ1 Uniprot:Q9VUZ1
Length = 139
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 37/76 (48%), Positives = 50/76 (65%)
Query: 3 TTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLK 59
+T F+IV +N+ PIYE E V +++ED L QFI HAALD+V + W T+ M LK
Sbjct: 2 STYYFVIVGQNDNPIYEKEFSTVNKELRKEDHRHLTQFIAHAALDLVDEHKWKTANMQLK 61
Query: 60 AIDRFNDLVVSVYVTA 75
+IDRFN VS ++TA
Sbjct: 62 SIDRFNQWFVSAFITA 77
>ZFIN|ZDB-GENE-060929-1266 [details] [associations]
symbol:trappc2 "trafficking protein particle
complex 2" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 ZFIN:ZDB-GENE-060929-1266
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 PANTHER:PTHR12403 eggNOG:COG5603
GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:BC124169 IPI:IPI00806101
RefSeq:NP_001070243.1 UniGene:Dr.16486 ProteinModelPortal:Q08CN0
SMR:Q08CN0 STRING:Q08CN0 Ensembl:ENSDART00000099693 GeneID:767808
KEGG:dre:767808 InParanoid:Q08CN0 NextBio:20918186
ArrayExpress:Q08CN0 Bgee:Q08CN0 Uniprot:Q08CN0
Length = 140
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 33/80 (41%), Positives = 53/80 (66%)
Query: 1 MATTACFIIVSRNEIPIYEAEV---GSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F++V ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVMVGHHDNPVFELEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>RGD|6499350 [details] [associations]
symbol:LOC100910318 "trafficking protein particle complex
subunit 2-like" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0006351
GO:GO:0006888 SUPFAM:SSF64356 EMBL:CH473948 OMA:VGHNDNP
PANTHER:PTHR12403 GeneTree:ENSGT00510000047168 OrthoDB:EOG49GKHT
EMBL:AC105470 IPI:IPI00817107 RefSeq:NP_001258040.1
RefSeq:NP_001258041.1 Ensembl:ENSRNOT00000006006 GeneID:100910318
KEGG:rno:100910318 Uniprot:D3ZVF4
Length = 140
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G +++ L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKTESKDEHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS +VTAGH
Sbjct: 61 LKTVDKFNEWFVSAFVTAGH 80
>DICTYBASE|DDB_G0282887 [details] [associations]
symbol:trappc2 "trafficking protein particle complex
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 dictyBase:DDB_G0282887
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 HSSP:Q9CQP2 RefSeq:XP_639381.1
ProteinModelPortal:Q54RV6 STRING:Q54RV6 EnsemblProtists:DDB0266387
GeneID:8623820 KEGG:ddi:DDB_G0282887 Uniprot:Q54RV6
Length = 133
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 31/75 (41%), Positives = 52/75 (69%)
Query: 3 TTACFIIVSRNEIPIYEAEVGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMFLKAID 62
+T F+I+ +N+ P+YE E V++++ L Q+I H +LDIV++ W ++ M+LK ID
Sbjct: 2 STFTFLIIGKNDNPLYEIEFPITVQKKETYVL-QYIAHGSLDIVEEHVWKSNNMYLKIID 60
Query: 63 RFNDLVVSVYVTAGH 77
+FN + +S +VTAGH
Sbjct: 61 KFNKVQISSFVTAGH 75
>POMBASE|SPBC11G11.04 [details] [associations]
symbol:trs20 "TRAPP complex subunit Trs20 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005801 "cis-Golgi network" evidence=IC] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISO] [GO:0030008 "TRAPP complex" evidence=ISO] [GO:0032313
"regulation of Rab GTPase activity" evidence=IC] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
PomBase:SPBC11G11.04 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006888
GO:GO:0032313 SUPFAM:SSF64356 GO:GO:0030008 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 HOGENOM:HOG000214139 HSSP:Q9CQP2
PIR:T39331 RefSeq:NP_595722.1 ProteinModelPortal:Q9USZ5
STRING:Q9USZ5 EnsemblFungi:SPBC11G11.04.1 GeneID:2539833
KEGG:spo:SPBC11G11.04 OrthoDB:EOG479JHG NextBio:20800981
Uniprot:Q9USZ5
Length = 136
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 30/74 (40%), Positives = 50/74 (67%)
Query: 4 TACFIIVSRNEIPIYEAEVGSAVKREDAA---QLHQFILHAALDIVQDLAWTTSAMFLKA 60
TA I+ + P+YE E+G ++ D + L+QFI+H++LDIV L WT++A ++K
Sbjct: 2 TAYAAIIGTKDNPVYELEMGPINEKLDRSLNSHLNQFIVHSSLDIVDQLQWTSNAFYMKT 61
Query: 61 IDRFNDLVVSVYVT 74
ID+F+++ +S YVT
Sbjct: 62 IDQFHEMYISAYVT 75
>UNIPROTKB|Q5ZKP4 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9031 "Gallus gallus" [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005783 GO:GO:0005794 GO:GO:0048471 GO:GO:0006888
SUPFAM:SSF64356 CTD:6399 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
HOVERGEN:HBG006717 OrthoDB:EOG49GKHT EMBL:AJ720040
EMBL:AADN02011353 IPI:IPI00570779 RefSeq:NP_001006263.1
UniGene:Gga.7014 STRING:Q5ZKP4 Ensembl:ENSGALT00000026761
GeneID:418634 KEGG:gga:418634 InParanoid:Q5ZKP4 NextBio:20821790
Uniprot:Q5ZKP4
Length = 140
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 1 MATTACFIIVSRNEIPIYEAEV---GSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVSVYVTAGH 77
LK +D+FN+ VS + H
Sbjct: 61 LKTVDKFNEWFVSAFAFVLH 80
>UNIPROTKB|E5RFG0 [details] [associations]
symbol:TRAPPC2 "Trafficking protein particle complex
subunit 2" species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628
GO:GO:0005622 GO:GO:0006888 SUPFAM:SSF64356 EMBL:AC003037
HGNC:HGNC:23068 ChiTaRS:TRAPPC2 PANTHER:PTHR12403 IPI:IPI00641353
ProteinModelPortal:E5RFG0 SMR:E5RFG0 Ensembl:ENST00000518847
ArrayExpress:E5RFG0 Bgee:E5RFG0 Uniprot:E5RFG0
Length = 74
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 1 MATTACFIIVSRNEIPIYEAE---VGSAVKREDAAQLHQFILHAALDIVQDLAWTTSAMF 57
M+ + F+IV ++ P++E E G A ++D L+QFI HAALD+V + W ++ M+
Sbjct: 1 MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY 60
Query: 58 LKAIDRFNDLVVS 70
LK +D+FN+ VS
Sbjct: 61 LKTVDKFNEWFVS 73
>WB|WBGene00021046 [details] [associations]
symbol:sedl-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0005801 "cis-Golgi
network" evidence=IEA] InterPro:IPR006722 InterPro:IPR011012
Pfam:PF04628 GO:GO:0005783 GO:GO:0005794 GO:GO:0048471
GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP PANTHER:PTHR12403
eggNOG:COG5603 GeneTree:ENSGT00510000047168 HOGENOM:HOG000214139
EMBL:FO080991 PIR:T29507 RefSeq:NP_508272.1 HSSP:Q9CQP2
ProteinModelPortal:O02173 SMR:O02173 IntAct:O02173 STRING:O02173
PaxDb:O02173 EnsemblMetazoa:W05H7.3 GeneID:180478
KEGG:cel:CELE_W05H7.3 UCSC:W05H7.3 CTD:180478 WormBase:W05H7.3
InParanoid:O02173 NextBio:909558 Uniprot:O02173
Length = 141
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/80 (43%), Positives = 47/80 (58%)
Query: 1 MATTAC-FIIVSRNEIPIYEAE--VGSAVKREDAAQLH--QFILHAALDIVQDLAWTTSA 55
MAT F I+ + PI+E + VG +E H +I HAALDIV + A TTS
Sbjct: 1 MATKEFYFAIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHALTTSQ 60
Query: 56 MFLKAIDRFNDLVVSVYVTA 75
M+LK +D+FN+ VS +VTA
Sbjct: 61 MYLKMVDKFNEWYVSAFVTA 80
>UNIPROTKB|O02173 [details] [associations]
symbol:sedl-1 "Probable trafficking protein particle
complex subunit 2" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005783 GO:GO:0005794
GO:GO:0048471 GO:GO:0006888 SUPFAM:SSF64356 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 EMBL:FO080991 PIR:T29507 RefSeq:NP_508272.1
HSSP:Q9CQP2 ProteinModelPortal:O02173 SMR:O02173 IntAct:O02173
STRING:O02173 PaxDb:O02173 EnsemblMetazoa:W05H7.3 GeneID:180478
KEGG:cel:CELE_W05H7.3 UCSC:W05H7.3 CTD:180478 WormBase:W05H7.3
InParanoid:O02173 NextBio:909558 Uniprot:O02173
Length = 141
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/80 (43%), Positives = 47/80 (58%)
Query: 1 MATTAC-FIIVSRNEIPIYEAE--VGSAVKREDAAQLH--QFILHAALDIVQDLAWTTSA 55
MAT F I+ + PI+E + VG +E H +I HAALDIV + A TTS
Sbjct: 1 MATKEFYFAIIGHCDQPIFEMDFPVGEKKTKESEGTRHLNHYIGHAALDIVDEHALTTSQ 60
Query: 56 MFLKAIDRFNDLVVSVYVTA 75
M+LK +D+FN+ VS +VTA
Sbjct: 61 MYLKMVDKFNEWYVSAFVTA 80
>SGD|S000000458 [details] [associations]
symbol:TRS20 "Subunit of the transport protein particle
(TRAPP) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0000407
"pre-autophagosomal structure" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA;IGI;IMP] [GO:0030008
"TRAPP complex" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR006722 InterPro:IPR011012 Pfam:PF04628 SGD:S000000458
GO:GO:0005783 GO:GO:0006914 EMBL:BK006936 GO:GO:0006888 EMBL:X70529
SUPFAM:SSF64356 GO:GO:0000407 GO:GO:0030008 OMA:VGHNDNP
PANTHER:PTHR12403 eggNOG:COG5603 GeneTree:ENSGT00510000047168
HOGENOM:HOG000214139 OrthoDB:EOG479JHG EMBL:Z36123 PIR:S32957
RefSeq:NP_009813.1 ProteinModelPortal:P38334 SMR:P38334
DIP:DIP-1711N IntAct:P38334 MINT:MINT-407365 STRING:P38334
PaxDb:P38334 EnsemblFungi:YBR254C GeneID:852556 KEGG:sce:YBR254C
CYGD:YBR254c NextBio:971655 Genevestigator:P38334
GermOnline:YBR254C Uniprot:P38334
Length = 175
Score = 101 (40.6 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 7 FIIVSRNEIPIYEAEVGSAVKRE----DAAQLHQFILHAALDIVQDLAW 51
F I+ + + P+YE E +A + D +L+ FILHA+LDIV+DL W
Sbjct: 5 FAIIGKKDNPVYEIEFTNAENPQGFPQDLKELNPFILHASLDIVEDLQW 53
Score = 37 (18.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 53 TSAMFLKAIDRFNDLVVSVYVT 74
T +L +D F L ++ Y++
Sbjct: 84 TDNCYLGKVDHFYGLAITAYIS 105
>ASPGD|ASPL0000007051 [details] [associations]
symbol:AN11500 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030008 "TRAPP complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR006722
InterPro:IPR011012 Pfam:PF04628 GO:GO:0005622 EMBL:BN001301
GO:GO:0006888 SUPFAM:SSF64356 PANTHER:PTHR12403
HOGENOM:HOG000214139 EnsemblFungi:CADANIAT00006889 OMA:MYLKHID
Uniprot:C8V2D4
Length = 207
Score = 94 (38.1 bits), Expect = 0.00019, P = 0.00019
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 7 FIIVSRNEIPIYEAEVGSA------VKR---EDAAQ---LHQFILHAALDIVQDLAWTTS 54
F I+S ++P++ G++ + R DAAQ + QFI+H++LD++++ W
Sbjct: 5 FTILSPTDVPLFNIAFGTSKSGGDGIARFRFPDAAQNTYMTQFIIHSSLDMLEEAQWMGG 64
Query: 55 AMFLKAIDRFNDLVVSVYVTA 75
M+LK ID + S YV+A
Sbjct: 65 NMYLKHIDTYPP--ASAYVSA 83
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.327 0.133 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 102 102 0.00091 102 3 11 22 0.44 29
29 0.48 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 551 (59 KB)
Total size of DFA: 105 KB (2071 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.58u 0.15s 9.73t Elapsed: 00:00:00
Total cpu time: 9.58u 0.15s 9.73t Elapsed: 00:00:00
Start: Fri May 10 16:35:44 2013 End: Fri May 10 16:35:44 2013