BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034170
(102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470
OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1
Length = 414
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 76/106 (71%), Gaps = 10/106 (9%)
Query: 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIA---------AVAVFYFHDEFTWLKGFGLFT 51
ML GGALAF MV TE+VLVSVTSAVTV IA VAVFYFHDEFTWLKG GL
Sbjct: 305 MLFGGALAFCMVLTEYVLVSVTSAVTVTIAGVVKEAVTIVVAVFYFHDEFTWLKGVGLMI 364
Query: 52 ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEEIDD 97
I+VGVSLFNWYKY KLQ GH E+ + + + KYVIL+E+DD
Sbjct: 365 IMVGVSLFNWYKYDKLQKGHKTEEEK-QLQAPSQTGKYVILDEMDD 409
>sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2
Length = 374
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 20/103 (19%)
Query: 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFT 51
+L G LAFFMV++EF L+ TS VT+ + + + ++HD + GL
Sbjct: 281 ILVPGTLAFFMVASEFGLIQKTSIVTLSVCGILKEIITIIASTLFYHDILLPINIVGLVI 340
Query: 52 ILVGVSLFNWYKYQKLQAGHANEDGMLGSRETNASAKYVILEE 94
L G+ ++N+Y+ K +E +Y++L E
Sbjct: 341 TLCGIGVYNYYRITKGN-----------KKEAEKEVEYIVLNE 372
>sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1
SV=2
Length = 365
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 4 GGALAFFMVSTEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFTILV 54
GG LAF + +EF+LVS TS++T+ IA + A D+ + L G L
Sbjct: 249 GGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLS 308
Query: 55 GVSLFNWYKYQKLQAGHANEDG 76
G+SL + L+A H+ DG
Sbjct: 309 GISL-----HVALKALHSRGDG 325
>sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390
OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1
Length = 350
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 3 SGGALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTW---------LKGFGLFTIL 53
+ AF + F+LV TSA+T+ +A V + F+W L FG
Sbjct: 240 TNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPLNLFGYGLAF 299
Query: 54 VGVSLFNWYKYQ---------KLQAGHANEDG-MLGSRETNASAK 88
+GV+ +N K Q K+Q G E G +L RE+ A+AK
Sbjct: 300 LGVAYYNHCKLQALKAKDAQKKVQQGDEEEAGKLLEERESEAAAK 344
>sp|A8FRQ8|ARNF_SHESH Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase
subunit ArnF OS=Shewanella sediminis (strain HAW-EB3)
GN=arnF PE=3 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 6 ALAFFMVSTEFVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGV 56
AL +S + L+S+ S V V + AV + + ++ +W+KG G+F IL+G+
Sbjct: 82 ALKRLPLSIAYPLLSL-SYVLVYLGAVYLPWLNEPLSWVKGTGIFLILLGL 131
>sp|Q61ZW5|LMBD2_CAEBR LMBR1 domain-containing protein 2 homolog OS=Caenorhabditis
briggsae GN=CBG02934 PE=3 SV=1
Length = 644
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 7 LAFFMVSTE--FVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLF----- 59
+ FF++ +E F +VS T + + A FH ++T FG+ L+ + F
Sbjct: 376 MTFFVLFSECTFFVVSYTVSPAAFVTEYASNRFHYKYTQFVAFGIIVYLITCAYFTIFRL 435
Query: 60 NWYKYQKLQA-GHANEDGMLGS 80
YKY L GH +E+ +L S
Sbjct: 436 QIYKYYHLDPNGHTDENSILFS 457
>sp|Q18695|LMBD2_CAEEL LMBR1 domain-containing protein 2 homolog OS=Caenorhabditis elegans
GN=C47G2.4 PE=3 SV=1
Length = 644
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 7 LAFFMVSTE--FVLVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLF----- 59
+ FF++ +E F +VS T + + A FH ++T FG+ L+ + F
Sbjct: 376 MTFFVLFSECTFFVVSYTLSPAAFVTEYASTRFHYKYTQFVAFGIIVYLITSAYFTIFRL 435
Query: 60 NWYKYQKLQA-GHANEDGMLGS 80
YKY L GH +E+ +L S
Sbjct: 436 QIYKYYHLDPNGHTDENSILFS 457
>sp|Q9M1E2|PTR37_ARATH Nitrate excretion transporter 1 OS=Arabidopsis thaliana GN=NAXT1
PE=1 SV=1
Length = 558
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 22 TSAVTVQIAAVAVFYFHDEFTWLKGFGL------FTILVGVSLFNWYKYQK 66
T+ + I+A A+ Y D +W GFGL F+ LV VS +YK+ K
Sbjct: 185 TTYLAGAISATAIVYTEDNISWTLGFGLSVAANFFSFLVFVSGKRFYKHDK 235
>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1
PE=2 SV=1
Length = 336
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIA-----AVAV----FYFHDEFTWLKGFGLFT 51
+LS G LAF + + F ++ T+AVT +A AVAV F + +++ G
Sbjct: 229 ILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVMVSWLIFRNPISYMNAVGCGI 288
Query: 52 ILVGVSLFNWYKY 64
LVG + + + ++
Sbjct: 289 TLVGCTFYGYVRH 301
>sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400
OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1
Length = 349
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 16 FVLVSVTSAVTVQIAAVAVFYFHDEFTW---------LKGFGLFTILVGVSLFNWYKYQK 66
F+LV TSA+T+ +A V + F+W + FG +GV+ +N K Q
Sbjct: 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGIAFLGVAYYNHAKLQA 312
Query: 67 LQAGHANEDGMLGSRET 83
L+A A + ET
Sbjct: 313 LKAKEAQKTAQQVDEET 329
>sp|Q8VCX2|S35C2_MOUSE Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1
SV=1
Length = 364
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 14/72 (19%)
Query: 14 TEFVLVSVTSAVTVQIAAV---------AVFYFHDEFTWLKGFGLFTILVGVSLFNWYKY 64
+EF+LVS TS++T+ IA + A D+ + L G L G+SL +
Sbjct: 259 SEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLNWLGFALCLSGISL-----H 313
Query: 65 QKLQAGHANEDG 76
L+A H+ DG
Sbjct: 314 VALKALHSRGDG 325
>sp|Q8RY83|PUP13_ARATH Probable purine permease 13 OS=Arabidopsis thaliana GN=PUP13 PE=2
SV=1
Length = 361
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 3 SGGALAF-FMVSTEFV-LVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFN 60
S GA+A F+VS+ F L+ S + +AA+AVF HD+ T +K + +G F
Sbjct: 285 SVGAVALIFLVSSLFSNLIGTLSLIVTPLAAIAVF--HDKLTEVKMVAMLIAFMG---FG 339
Query: 61 WYKYQK----LQAGHANE 74
+Y YQ L+ A E
Sbjct: 340 FYIYQNYLDDLKVQRARE 357
>sp|Q9FLL4|PUP12_ARATH Putative purine permease 12 OS=Arabidopsis thaliana GN=PUP12 PE=3
SV=1
Length = 358
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 4 GGALAFFMVSTEFV-LVSVTSAVTVQIAAVAVFYFHDEFTWLKGFGLFTILVGVSLFNWY 62
G F+VS+ F L+S S + +AA+AV FHD+ T +K + G F +Y
Sbjct: 284 GAVSLIFLVSSLFSNLISTLSLIVTPLAAIAV--FHDKLTEVKMVAMPIAFTG---FTFY 338
Query: 63 KYQK----LQAGHANE 74
YQ L+ A E
Sbjct: 339 IYQNYLDDLKVQRARE 354
>sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660
OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2
Length = 332
Score = 29.3 bits (64), Expect = 7.4, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 11/74 (14%)
Query: 1 MLSGGALAFFMVS-TEFVLVSVTSAVTVQIAAV----------AVFYFHDEFTWLKGFGL 49
+LS +L F ++ + F+++S TSA+T++IA V A+ + + T + FG
Sbjct: 234 VLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDWLVVLVSALLFAETKLTIINLFGY 293
Query: 50 FTILVGVSLFNWYK 63
+VGV+ +N +K
Sbjct: 294 AVAIVGVATYNNHK 307
>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5
PE=2 SV=1
Length = 341
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 1 MLSGGALAFFMVSTEFVLVSVTSAVTVQIA-----AVAVFY----FHDEFTWLKGFGLFT 51
+ + G LAF + + F ++ T+AVT +A AVAVF F + + + G
Sbjct: 235 LFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPISPMNAVGCGI 294
Query: 52 ILVGVSLFNWYKY 64
LVG + + + ++
Sbjct: 295 TLVGCTFYGYVRH 307
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,850,846
Number of Sequences: 539616
Number of extensions: 1171707
Number of successful extensions: 2609
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2594
Number of HSP's gapped (non-prelim): 33
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)