BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034173
MGMGEISESVEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGK
VLDDTQDDDDRDDVYLQLSNGGNINISLFNLDDLSFQFEFGS

High Scoring Gene Products

Symbol, full name Information P value
AT2G35360 protein from Arabidopsis thaliana 2.6e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034173
        (102 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2062445 - symbol:AT2G35360 "AT2G35360" species...   137  2.6e-09   1


>TAIR|locus:2062445 [details] [associations]
            symbol:AT2G35360 "AT2G35360" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] InterPro:IPR000626 Pfam:PF00240
            EMBL:CP002685 GenomeReviews:CT485783_GR InterPro:IPR019955
            PROSITE:PS50053 EMBL:AC005314 InterPro:IPR019387 Pfam:PF10260
            EMBL:AY219071 EMBL:AY649261 IPI:IPI00532322 PIR:F84767
            RefSeq:NP_181079.1 UniGene:At.37678 ProteinModelPortal:O82301
            SMR:O82301 EnsemblPlants:AT2G35360.1 GeneID:818103
            KEGG:ath:AT2G35360 TAIR:At2g35360 eggNOG:NOG249474
            HOGENOM:HOG000005906 InParanoid:O82301 OMA:HRWDLGP PhylomeDB:O82301
            ProtClustDB:CLSN2683689 ArrayExpress:O82301 Genevestigator:O82301
            Uniprot:O82301
        Length = 225

 Score = 137 (53.3 bits), Expect = 2.6e-09, P = 2.6e-09
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query:     9 SVEITVKTIGPAPPSRLSVSSPIKVRDLRKLIATSSANHLPIENLRLVFRGKVL 62
             +VEIT KTIGPA PS++ V+S IK+RDLR  IA       P+  LR++ RGK L
Sbjct:    17 TVEITYKTIGPARPSQIRVASHIKIRDLRNAIAEKGK--FPVSTLRMILRGKAL 68


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.137   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102        91   0.00091  102 3  11 22  0.49    29
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  410 (44 KB)
  Total size of DFA:  72 KB (2062 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.01u 0.15s 10.16t   Elapsed:  00:00:00
  Total cpu time:  10.01u 0.15s 10.16t   Elapsed:  00:00:00
  Start:  Fri May 10 16:39:08 2013   End:  Fri May 10 16:39:08 2013

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