BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034180
(102 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449463763|ref|XP_004149601.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Cucumis sativus]
gi|449463765|ref|XP_004149602.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Cucumis sativus]
gi|449530742|ref|XP_004172352.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Cucumis sativus]
gi|449530744|ref|XP_004172353.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Cucumis sativus]
Length = 99
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/52 (100%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 52
>gi|388499482|gb|AFK37807.1| unknown [Lotus japonicus]
Length = 99
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/52 (100%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 52
>gi|356512406|ref|XP_003524910.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
max]
Length = 99
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/52 (100%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 52
>gi|388507056|gb|AFK41594.1| unknown [Medicago truncatula]
Length = 99
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/52 (100%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 52
>gi|351720779|ref|NP_001235908.1| uncharacterized protein LOC100306498 [Glycine max]
gi|255628715|gb|ACU14702.1| unknown [Glycine max]
Length = 99
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/52 (100%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 52
>gi|359487263|ref|XP_003633551.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Vitis vinifera]
gi|359487265|ref|XP_003633552.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Vitis vinifera]
gi|359487267|ref|XP_003633553.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
3 [Vitis vinifera]
gi|359487269|ref|XP_003633554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
4 [Vitis vinifera]
Length = 99
Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/52 (100%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 52
>gi|224059650|ref|XP_002299952.1| predicted protein [Populus trichocarpa]
gi|224104033|ref|XP_002313290.1| predicted protein [Populus trichocarpa]
gi|118483640|gb|ABK93714.1| unknown [Populus trichocarpa]
gi|222847210|gb|EEE84757.1| predicted protein [Populus trichocarpa]
gi|222849698|gb|EEE87245.1| predicted protein [Populus trichocarpa]
Length = 99
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/52 (100%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 52
>gi|294463208|gb|ADE77140.1| unknown [Picea sitchensis]
Length = 98
Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/52 (96%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKF+DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA+EFLR
Sbjct: 1 MSGRKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLR 52
>gi|15227722|ref|NP_178480.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|30678085|ref|NP_849931.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|4582434|gb|AAD24820.1| putative snRNP splicing factor [Arabidopsis thaliana]
gi|27765062|gb|AAO23652.1| At2g03870 [Arabidopsis thaliana]
gi|110742944|dbj|BAE99367.1| putative snRNP splicing factor [Arabidopsis thaliana]
gi|330250666|gb|AEC05760.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
gi|330250667|gb|AEC05761.1| U6 snRNA-associated Sm-like protein LSm7 [Arabidopsis thaliana]
Length = 99
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/54 (94%), Positives = 53/54 (98%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF+R +
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDH 54
>gi|297814702|ref|XP_002875234.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata]
gi|297321072|gb|EFH51493.1| hypothetical protein ARALYDRAFT_484298 [Arabidopsis lyrata subsp.
lyrata]
Length = 99
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/54 (94%), Positives = 53/54 (98%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF+R +
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDH 54
>gi|255544228|ref|XP_002513176.1| conserved hypothetical protein [Ricinus communis]
gi|223547674|gb|EEF49167.1| conserved hypothetical protein [Ricinus communis]
Length = 99
Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/52 (98%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE+LR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYLR 52
>gi|294464784|gb|ADE77898.1| unknown [Picea sitchensis]
Length = 80
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/52 (96%), Positives = 52/52 (100%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKF+DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA+EFLR
Sbjct: 1 MSGRKETVLDLAKFIDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEFLR 52
>gi|297736225|emb|CBI24863.3| unnamed protein product [Vitis vinifera]
Length = 107
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/56 (92%), Positives = 54/56 (96%)
Query: 29 KSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++L SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 5 ETLFQSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 60
>gi|115475055|ref|NP_001061124.1| Os08g0177700 [Oryza sativa Japonica Group]
gi|38636805|dbj|BAD03046.1| putative snRNP splicing factor -related [Oryza sativa Japonica
Group]
gi|38636982|dbj|BAD03242.1| putative snRNP splicing factor -related [Oryza sativa Japonica
Group]
gi|113623093|dbj|BAF23038.1| Os08g0177700 [Oryza sativa Japonica Group]
gi|218200565|gb|EEC82992.1| hypothetical protein OsI_28028 [Oryza sativa Indica Group]
Length = 98
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/52 (98%), Positives = 51/52 (98%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF R
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFER 52
>gi|357144783|ref|XP_003573412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Brachypodium distachyon]
Length = 101
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/52 (94%), Positives = 50/52 (96%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDE +EF R
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEVIEFER 52
>gi|226530979|ref|NP_001152342.1| LSM7-like [Zea mays]
gi|195651475|gb|ACG45205.1| LSM7-like [Zea mays]
gi|195655329|gb|ACG47132.1| LSM7-like [Zea mays]
gi|414585245|tpg|DAA35816.1| TPA: LSM7-like protein [Zea mays]
Length = 98
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 50/52 (96%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
M+GRKET LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE+ R
Sbjct: 1 MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEYER 52
>gi|357166207|ref|XP_003580635.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Brachypodium distachyon]
Length = 100
Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 49/52 (94%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
M+GRKET LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE R
Sbjct: 1 MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESER 52
>gi|242077336|ref|XP_002448604.1| hypothetical protein SORBIDRAFT_06g029950 [Sorghum bicolor]
gi|241939787|gb|EES12932.1| hypothetical protein SORBIDRAFT_06g029950 [Sorghum bicolor]
Length = 98
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/52 (92%), Positives = 49/52 (94%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
M+GRKET LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE R
Sbjct: 1 MAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVESER 52
>gi|226530574|ref|NP_001148733.1| LSM7-like [Zea mays]
gi|195621704|gb|ACG32682.1| LSM7-like [Zea mays]
gi|413919649|gb|AFW59581.1| LSM7-like protein [Zea mays]
Length = 156
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/54 (88%), Positives = 51/54 (94%)
Query: 31 LKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++M+GRKET LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE R
Sbjct: 57 VEMAGRKETALDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVENER 110
>gi|356544192|ref|XP_003540538.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Glycine
max]
Length = 97
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/52 (96%), Positives = 50/52 (96%), Gaps = 2/52 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVDKGVQVKLTGGRQ GTLKGYDQLLNLVLDEAVEFLR
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQ--GTLKGYDQLLNLVLDEAVEFLR 50
>gi|168012739|ref|XP_001759059.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689758|gb|EDQ76128.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/52 (90%), Positives = 49/52 (94%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVD+GV VKL+GGRQVTGTLKGYDQLLNLVLDEA E LR
Sbjct: 1 MSGRKETVLDLAKFVDRGVSVKLSGGRQVTGTLKGYDQLLNLVLDEATENLR 52
>gi|168045744|ref|XP_001775336.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673281|gb|EDQ59806.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 102
Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 48/52 (92%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSGRKETVLDLAKFVD+GV VKL+GGRQVTG LKGYDQLLNLVLDEA E LR
Sbjct: 1 MSGRKETVLDLAKFVDRGVSVKLSGGRQVTGILKGYDQLLNLVLDEATENLR 52
>gi|302786868|ref|XP_002975205.1| hypothetical protein SELMODRAFT_415303 [Selaginella
moellendorffii]
gi|302791693|ref|XP_002977613.1| hypothetical protein SELMODRAFT_417493 [Selaginella
moellendorffii]
gi|300154983|gb|EFJ21617.1| hypothetical protein SELMODRAFT_417493 [Selaginella
moellendorffii]
gi|300157364|gb|EFJ23990.1| hypothetical protein SELMODRAFT_415303 [Selaginella
moellendorffii]
Length = 101
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 50/54 (92%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
MS RKETVLDLAKF+DKGV VKL+GGRQV GTLKGYDQLLNLVLDEAVE+LR +
Sbjct: 1 MSNRKETVLDLAKFIDKGVCVKLSGGRQVIGTLKGYDQLLNLVLDEAVEYLRDH 54
>gi|303278768|ref|XP_003058677.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459837|gb|EEH57132.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 106
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 49/52 (94%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSG+KETVLDL KF+DKGV+VKL+GGR+VTGTLKG+DQLLNLVLDE VE LR
Sbjct: 1 MSGKKETVLDLGKFIDKGVRVKLSGGREVTGTLKGFDQLLNLVLDECVESLR 52
>gi|255082277|ref|XP_002508357.1| predicted protein [Micromonas sp. RCC299]
gi|226523633|gb|ACO69615.1| predicted protein [Micromonas sp. RCC299]
Length = 104
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 48/52 (92%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSG+KETVLDL KF+DKGV+VKL GGR+VTGTLKG+DQLLNLVLDE E+LR
Sbjct: 1 MSGKKETVLDLGKFIDKGVRVKLAGGREVTGTLKGFDQLLNLVLDECEEYLR 52
>gi|357505733|ref|XP_003623155.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula]
gi|355498170|gb|AES79373.1| U6 snRNA-associated Sm-like protein LSm7 [Medicago truncatula]
Length = 130
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 52/83 (62%), Gaps = 31/83 (37%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQ-------------------------------V 61
MSGRKETVLDLAKFVDKGVQVKLTGGRQ V
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQGNGSCPLIAGGIGVVSECDGCDITYSPVKINV 60
Query: 62 TGTLKGYDQLLNLVLDEAVEFLR 84
TGTLKGYDQLLNLVLDEAVEFLR
Sbjct: 61 TGTLKGYDQLLNLVLDEAVEFLR 83
>gi|145349929|ref|XP_001419379.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579610|gb|ABO97672.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 100
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 47/48 (97%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
KETVLDLA+F+D+GV+VKL+GGR+VTGTLKGYDQLLNLVLDEA+E LR
Sbjct: 4 KETVLDLARFIDRGVRVKLSGGREVTGTLKGYDQLLNLVLDEAIEHLR 51
>gi|384247364|gb|EIE20851.1| U6 snRNA-associated Sm-like protein LSm7 [Coccomyxa
subellipsoidea C-169]
Length = 99
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/49 (81%), Positives = 45/49 (91%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
RKE LDLAKF+DKGV+VKL+GGR+V GTLKGYDQLLNLVLDE VE+LR
Sbjct: 3 RKENALDLAKFIDKGVRVKLSGGREVEGTLKGYDQLLNLVLDETVEYLR 51
>gi|302840191|ref|XP_002951651.1| hypothetical protein VOLCADRAFT_109137 [Volvox carteri f.
nagariensis]
gi|300262899|gb|EFJ47102.1| hypothetical protein VOLCADRAFT_109137 [Volvox carteri f.
nagariensis]
Length = 108
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Query: 33 MSGR-KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSG+ KE+ +DLAKFVDKGV+VKL GGR+V G LKGYDQLLNLVLDEAVE+LR
Sbjct: 1 MSGKAKESAVDLAKFVDKGVRVKLAGGREVQGILKGYDQLLNLVLDEAVEYLR 53
>gi|307107960|gb|EFN56201.1| hypothetical protein CHLNCDRAFT_22477 [Chlorella variabilis]
Length = 101
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
Query: 33 MSGR-KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
M+GR KE+ LDLAKFVDK ++VKL GGR+V G LKGYDQLLNLVLDEAVE+LR
Sbjct: 1 MAGRGKESALDLAKFVDKSIRVKLAGGREVVGVLKGYDQLLNLVLDEAVEYLR 53
>gi|159490830|ref|XP_001703376.1| small nuclear riboprotein, U6 sm-like protein [Chlamydomonas
reinhardtii]
gi|158280300|gb|EDP06058.1| small nuclear riboprotein, U6 sm-like protein [Chlamydomonas
reinhardtii]
Length = 109
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 48/53 (90%), Gaps = 1/53 (1%)
Query: 33 MSGR-KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
M+G+ KE+ +DLAKF+DKGV+VKL GGR+V G LKGYDQLLNLV+DEAVE+LR
Sbjct: 1 MAGKAKESAVDLAKFIDKGVRVKLAGGREVQGILKGYDQLLNLVIDEAVEYLR 53
>gi|168040999|ref|XP_001772980.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675713|gb|EDQ62205.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 105
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 51/71 (71%), Gaps = 8/71 (11%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQ--VTGTLKGYDQLLNLVLDEAVEFLRGNLYNGI 91
SGRKETVLDLAKFVD+GV VKL+ VTGTLKGYDQLLNLVLDEA E RG ++
Sbjct: 2 SGRKETVLDLAKFVDRGVSVKLSDVNHLAVTGTLKGYDQLLNLVLDEASESSRGEIF--- 58
Query: 92 FVIVCFLLVCF 102
+C+ L F
Sbjct: 59 ---LCYPLTIF 66
>gi|301098772|ref|XP_002898478.1| U6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
gi|262104903|gb|EEY62955.1| U6 snRNA-associated Sm-like protein, putative [Phytophthora
infestans T30-4]
Length = 106
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
RK+ +LDLAK++D+ V+VK GGR+VTGTLKGYDQL+NLVLD+ VEFLR
Sbjct: 12 RKDPILDLAKYIDQEVRVKFHGGREVTGTLKGYDQLVNLVLDDCVEFLR 60
>gi|348673388|gb|EGZ13207.1| hypothetical protein PHYSODRAFT_334991 [Phytophthora sojae]
Length = 106
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 44/49 (89%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
RK+ +LDLAK++D+ V+VK GGR+VTGTLKGYDQL+NLVLD+ VEFLR
Sbjct: 12 RKDPILDLAKYIDQEVRVKFHGGREVTGTLKGYDQLVNLVLDDCVEFLR 60
>gi|412993861|emb|CCO14372.1| U6 snRNA-associated Sm-like protein LSm7 [Bathycoccus prasinos]
Length = 119
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K+TVLDL K++DKGV+VKL+GGR+V G LKG+DQLLNLVLDE E+LR
Sbjct: 23 HKQTVLDLGKYIDKGVRVKLSGGREVEGILKGFDQLLNLVLDETKEYLR 71
>gi|255941628|ref|XP_002561583.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586206|emb|CAP93954.1| Pc16g12840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 125
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL K++DK VQVK +GGR+VTGTLKGYDQL+NLVLDE E +R N
Sbjct: 35 KKENILDLNKYMDKEVQVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDEEGN 88
>gi|325188073|emb|CCA22616.1| U6 snRNAassociated Smlike protein putative [Albugo laibachii
Nc14]
Length = 119
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 40/49 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
RKE +LDL K++D V VK GGRQV GTLKGYDQL+NLVLDE +EFLR
Sbjct: 25 RKENILDLDKYIDHSVCVKFRGGRQVHGTLKGYDQLVNLVLDECIEFLR 73
>gi|402084831|gb|EJT79849.1| hypothetical protein GGTG_04932 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 143
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLA+++DK VQVK GGR+VTGTLKGYD L+NLVLD+ E +R + N
Sbjct: 51 KKENILDLARYMDKEVQVKFNGGREVTGTLKGYDALMNLVLDDVKETMRDDDGNETSRPL 110
Query: 90 GIFVIVCFLLVCF 102
G+ VI LLV
Sbjct: 111 GLVVIRGTLLVAL 123
>gi|70996088|ref|XP_752799.1| small nuclear ribonucleoprotein (LSM7) [Aspergillus fumigatus
Af293]
gi|44890026|emb|CAF32144.1| u6 snrna-associated sm-like protein, putative [Aspergillus
fumigatus]
gi|66850434|gb|EAL90761.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
fumigatus Af293]
gi|159131553|gb|EDP56666.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
fumigatus A1163]
Length = 134
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 44/56 (78%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGI 91
+KE +LDL+K++DK V+VK GGR+V+G LKGYDQL+NLVLD+ E +RG N I
Sbjct: 48 KKENILDLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRGKSLNDI 103
>gi|303317868|ref|XP_003068936.1| U6 snRNA-associated Sm-like protein LSm7, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240108617|gb|EER26791.1| U6 snRNA-associated Sm-like protein LSm7, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|320038992|gb|EFW20927.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 144
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK V VK +GGR+VTGTLKGYDQL+NLVLDE E +R + N
Sbjct: 54 KKENILDLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDDEGNETTRSL 113
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 114 GLIVARGTLLV 124
>gi|119186309|ref|XP_001243761.1| hypothetical protein CIMG_03202 [Coccidioides immitis RS]
gi|392870472|gb|EAS32278.2| hypothetical protein CIMG_03202 [Coccidioides immitis RS]
Length = 144
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK V VK +GGR+VTGTLKGYDQL+NLVLDE E +R + N
Sbjct: 54 KKENILDLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDEVKETMRDDEGNETTRSL 113
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 114 GLIVARGTLLV 124
>gi|440467485|gb|ELQ36705.1| hypothetical protein OOU_Y34scaffold00645g12 [Magnaporthe oryzae
Y34]
Length = 191
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDLAK++DK VQVK GGR+V GTLKGYD L+NLVLDE E +RG ++
Sbjct: 54 KKENILDLAKYMDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRGKSHS 107
>gi|258563080|ref|XP_002582285.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907792|gb|EEP82193.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 139
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK V VK +GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 48 KKENILDLTKYMDKEVHVKFSGGREVTGTLKGYDQLMNLVLDDVKEIMRDDEGNDSTRSL 107
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 108 GLIVARGTLLV 118
>gi|389646277|ref|XP_003720770.1| hypothetical protein MGG_02938 [Magnaporthe oryzae 70-15]
gi|351638162|gb|EHA46027.1| hypothetical protein MGG_02938 [Magnaporthe oryzae 70-15]
gi|440483313|gb|ELQ63726.1| hypothetical protein OOW_P131scaffold00952g14 [Magnaporthe oryzae
P131]
Length = 146
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK VQVK GGR+V GTLKGYD L+NLVLDE E +R N
Sbjct: 54 KKENILDLAKYMDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRDEEGNESSRPL 113
Query: 90 GIFVIVCFLLVCF 102
G+ V+ LLV
Sbjct: 114 GLVVVRGTLLVAI 126
>gi|367021900|ref|XP_003660235.1| hypothetical protein MYCTH_2050348 [Myceliophthora thermophila ATCC
42464]
gi|347007502|gb|AEO54990.1| hypothetical protein MYCTH_2050348 [Myceliophthora thermophila ATCC
42464]
Length = 141
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN-- 89
K +KE +LDL K++DK + VK GGR+ TG LKGYD L+NLVLDE E LRGN
Sbjct: 49 KERPKKENILDLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDEVEELLRGNEMTRP 108
Query: 90 -GIFVIVCFLLVCF 102
G+ V+ LLV
Sbjct: 109 LGLVVVRGTLLVVI 122
>gi|339237711|ref|XP_003380410.1| putative fibronectin type III domain protein [Trichinella
spiralis]
gi|316976745|gb|EFV59974.1| putative fibronectin type III domain protein [Trichinella
spiralis]
Length = 2755
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 45/59 (76%), Gaps = 4/59 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE----FLRGNLYNG 90
+KETV++L+ +++K ++VK GGR++TG LKGYDQLLNLVLD E F+ GNL NG
Sbjct: 8 KKETVINLSNYIEKALRVKFQGGREITGILKGYDQLLNLVLDNTTEYLPDFVDGNLVNG 66
>gi|213404126|ref|XP_002172835.1| U6 snRNP-associated protein Lsm7 [Schizosaccharomyces japonicus
yFS275]
gi|212000882|gb|EEB06542.1| U6 snRNP-associated protein Lsm7 [Schizosaccharomyces japonicus
yFS275]
Length = 112
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 42/49 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
RKE++LDL+++ D+ +Q KLTGGRQ++G LKGYDQL+NLVLD+ E LR
Sbjct: 21 RKESILDLSRYQDQRIQAKLTGGRQISGVLKGYDQLMNLVLDDVEENLR 69
>gi|427784749|gb|JAA57826.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 109
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE+++DL+K++DK ++VK GGR+ TG LKGYD LLNLV+D A EFLR
Sbjct: 11 KEKKRKESIVDLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEFLR 63
>gi|302308616|ref|NP_985600.2| AFR053Cp [Ashbya gossypii ATCC 10895]
gi|299790714|gb|AAS53424.2| AFR053Cp [Ashbya gossypii ATCC 10895]
gi|374108830|gb|AEY97736.1| FAFR053Cp [Ashbya gossypii FDAG1]
Length = 115
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDLAK+ D V+VKL GGR VTG LKGYDQL+NLVLDE VE+LR
Sbjct: 24 KREAILDLAKYQDTQVRVKLMGGRLVTGVLKGYDQLMNLVLDETVEYLR 72
>gi|346470139|gb|AEO34914.1| hypothetical protein [Amblyomma maculatum]
Length = 107
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE+++DL+K++DK ++VK GGR+ TG LKGYD LLNLV+D A EFLR
Sbjct: 9 KEKKRKESIVDLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEFLR 61
>gi|403169358|ref|XP_003328805.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167924|gb|EFP84386.2| small nuclear ribonucleoprotein [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 125
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 40/49 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDLAKF DK V+VK GGR++TG LKGYDQLLNLV+DE E LR
Sbjct: 31 KREAILDLAKFADKRVRVKFMGGREITGILKGYDQLLNLVMDEVEEILR 79
>gi|452845630|gb|EME47563.1| hypothetical protein DOTSEDRAFT_69495 [Dothistroma septosporum
NZE10]
Length = 133
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK GGR+VTGTLKGYDQL+NLVLD E R + N
Sbjct: 40 KKENILDLAKYMDKEISVKFNGGREVTGTLKGYDQLMNLVLDNVKELTRDDEGNTSTRNL 99
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 100 GLLVARGTLLV 110
>gi|425770497|gb|EKV08967.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum Pd1]
gi|425771863|gb|EKV10295.1| Small nuclear ribonucleoprotein (LSM7), putative [Penicillium
digitatum PHI26]
Length = 125
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL+K++DK VQVK GGR+V GTLKGYDQL+NLVLD+ E +R N
Sbjct: 35 KKENILDLSKYMDKEVQVKFNGGREVIGTLKGYDQLMNLVLDDVKETMRDEEGN 88
>gi|409076181|gb|EKM76554.1| hypothetical protein AGABI1DRAFT_131111 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 130
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN-GIFVI 94
++E +LDLAK+V++ ++VK GGR+V GTLKGYDQLLNLVLD+ E ++GN + +F++
Sbjct: 39 KREAILDLAKYVNEPIRVKFMGGREVVGTLKGYDQLLNLVLDDVQEQIQGNPTSFSLFIL 98
Query: 95 V 95
+
Sbjct: 99 I 99
>gi|426193423|gb|EKV43356.1| hypothetical protein AGABI2DRAFT_121482 [Agaricus bisporus var.
bisporus H97]
Length = 127
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 43/51 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
++E +LDLAK+V++ ++VK GGR+V GTLKGYDQLLNLVLD+ E ++GN
Sbjct: 39 KREAILDLAKYVNEPIRVKFMGGREVVGTLKGYDQLLNLVLDDVQEQIQGN 89
>gi|443924506|gb|ELU43510.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 129
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
R+E +LDL+K+ D+ ++VK TGGRQVTG LKGYDQLLNLVLD+ E +G L +
Sbjct: 34 RREAILDLSKYQDERIRVKFTGGRQVTGVLKGYDQLLNLVLDDVQEERQGTLSS 87
>gi|241244292|ref|XP_002402270.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215496302|gb|EEC05942.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442757953|gb|JAA71135.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 107
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE+++DL+K++DK ++VK GGR+ TG LKGYD LLNLV+D A E+LR
Sbjct: 9 KEKKRKESIVDLSKYLDKAIRVKFQGGREATGILKGYDPLLNLVIDNATEYLR 61
>gi|358385010|gb|EHK22607.1| hypothetical protein TRIVIDRAFT_60544 [Trichoderma virens Gv29-8]
Length = 132
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK GGR+V GTLKGYD L+NLVLDE E LR N
Sbjct: 41 KKENILDLAKYMDKEITVKFNGGREVRGTLKGYDALMNLVLDEVQETLRDEEGNESSRPL 100
Query: 90 GIFVIVCFLLV 100
G+ V+ LLV
Sbjct: 101 GLVVVRGTLLV 111
>gi|395327701|gb|EJF60098.1| LSM-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 96
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 43/50 (86%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
++E +LDLAK+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E L+G
Sbjct: 5 KREAILDLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQENLQG 54
>gi|302499670|ref|XP_003011830.1| U6 snRNP-associated protein Lsm7 [Arthroderma benhamiae CBS 112371]
gi|291175384|gb|EFE31190.1| U6 snRNP-associated protein Lsm7 [Arthroderma benhamiae CBS 112371]
Length = 223
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+KE +LDL K++DK V VK GGR+VTG LKGYDQL+NLVLD+ E +RG
Sbjct: 109 KKENILDLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRG 158
>gi|406861450|gb|EKD14504.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 133
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL K++DK + VK TGGR+VTGTLKGYD L+NLVLD+ E LR + N
Sbjct: 43 KKENILDLGKYMDKKITVKFTGGREVTGTLKGYDALMNLVLDDVDEVLRDDEGN 96
>gi|358393465|gb|EHK42866.1| hypothetical protein TRIATDRAFT_300894 [Trichoderma atroviride IMI
206040]
Length = 139
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK GGR+V GTLKGYD L+NLVLDE E LR + N
Sbjct: 48 KKENILDLAKYMDKAIIVKFNGGREVRGTLKGYDALMNLVLDEVQETLRDDQGNETTRSL 107
Query: 90 GIFVIVCFLLV 100
G+ V+ LLV
Sbjct: 108 GLVVVRGTLLV 118
>gi|322703623|gb|EFY95229.1| U6 snRNA-associated protein LSm7, putative [Metarhizium anisopliae
ARSEF 23]
Length = 134
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK GGR+VTGTLKGYD L+NLVLDE E +R N
Sbjct: 44 KKENILDLAKYMDKEITVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEEGNESTRPL 103
Query: 90 GIFVIVCFLLVCF 102
G+ V LLV
Sbjct: 104 GLVVARGTLLVVI 116
>gi|170097019|ref|XP_001879729.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645132|gb|EDR09380.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 99
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 42/51 (82%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
++E +LDL+K+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E GN
Sbjct: 13 KREAILDLSKYVNEKIRVKFTGGREVTGILKGYDQLLNLVLDEVEEEASGN 63
>gi|452986071|gb|EME85827.1| hypothetical protein MYCFIDRAFT_181789 [Pseudocercospora fijiensis
CIRAD86]
Length = 125
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK GGR+VTGTLKGYDQL+NLVLD E R N
Sbjct: 32 KKENILDLAKYMDKDITVKFNGGREVTGTLKGYDQLMNLVLDNVKETTRDEDGNTSTRNL 91
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 92 GLLVARGTLLV 102
>gi|322694161|gb|EFY85998.1| U6 snRNA-associated protein LSm7, putative [Metarhizium acridum
CQMa 102]
Length = 135
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK GGR+VTGTLKGYD L+NLVLDE E +R N
Sbjct: 45 KKENILDLAKYMDKEITVKFNGGREVTGTLKGYDALMNLVLDEVRETVRDEEGNESTRPL 104
Query: 90 GIFVIVCFLLVCF 102
G+ V LLV
Sbjct: 105 GLVVARGTLLVVI 117
>gi|295664210|ref|XP_002792657.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278771|gb|EEH34337.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 180
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDLAK+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 89 KKENILDLAKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEDN 142
>gi|225677618|gb|EEH15902.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 179
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDLAK+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 88 KKENILDLAKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEDN 141
>gi|312375289|gb|EFR22689.1| hypothetical protein AND_14337 [Anopheles darlingi]
Length = 169
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD +EFLR
Sbjct: 72 KEKRRKESILDLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTIEFLR 124
>gi|367010644|ref|XP_003679823.1| hypothetical protein TDEL_0B04830 [Torulaspora delbrueckii]
gi|359747481|emb|CCE90612.1| hypothetical protein TDEL_0B04830 [Torulaspora delbrueckii]
Length = 117
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDLAK+ D V+VKL GGR VTG LKGYDQL+NLVLDE +E++R
Sbjct: 25 KREAILDLAKYKDSKVRVKLMGGRLVTGILKGYDQLMNLVLDETLEYMR 73
>gi|380491285|emb|CCF35428.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 144
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL+K++DK + VK GGR+VTGTLKGYD L+NLVLDE E +R N
Sbjct: 53 KKENILDLSKYMDKQITVKFNGGREVTGTLKGYDALMNLVLDEVQEVMRDEEGNETTRSL 112
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 113 GLVVARGTLLV 123
>gi|121701131|ref|XP_001268830.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
clavatus NRRL 1]
gi|119396973|gb|EAW07404.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
clavatus NRRL 1]
Length = 140
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL+K++DK V+VK GGR+V+G LKGYDQL+NLVLD+ E +R + N
Sbjct: 50 KKENILDLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRDDEGN 103
>gi|345563731|gb|EGX46716.1| hypothetical protein AOL_s00097g464 [Arthrobotrys oligospora ATCC
24927]
Length = 168
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK +GGR+VTG LKGYDQL+NLVLD+ E +R + N
Sbjct: 75 KKEAILDLAKYMDKRIIVKFSGGREVTGALKGYDQLMNLVLDDVQEVMRDDEGNEQTREL 134
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 135 GLVVARGPLLV 145
>gi|157134384|ref|XP_001663270.1| SM protein G, putative [Aedes aegypti]
gi|108870499|gb|EAT34724.1| AAEL013061-PA [Aedes aegypti]
Length = 127
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK +GGR+ G LKGYD LLNLVLD VEFLR
Sbjct: 30 KEKRRKESILDLSKYLEKTIRVKFSGGREAAGVLKGYDPLLNLVLDNTVEFLR 82
>gi|322786976|gb|EFZ13200.1| hypothetical protein SINV_03814 [Solenopsis invicta]
Length = 116
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLY 88
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LRG Y
Sbjct: 7 KEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLRGVRY 63
>gi|330917406|ref|XP_003297804.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
gi|311329333|gb|EFQ94110.1| hypothetical protein PTT_08326 [Pyrenophora teres f. teres 0-1]
Length = 131
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 4/65 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL---RGNL-YNGI 91
+KE +LDL+K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L +GN+ Y +
Sbjct: 41 KKENILDLSKYMDKQITVKFSGGREVVGTLKGYDQLMNLVLDEVKEALTDDQGNIRYRKL 100
Query: 92 FVIVC 96
+IV
Sbjct: 101 GLIVA 105
>gi|310794009|gb|EFQ29470.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 143
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL+K++DK + VK GGR+VTGTLKGYD L+NLVLDE E +R N
Sbjct: 52 KKENILDLSKYMDKQITVKFNGGREVTGTLKGYDALMNLVLDEVQEVMRDEEGNETTRSL 111
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 112 GLVVARGTLLV 122
>gi|171676173|ref|XP_001903040.1| hypothetical protein [Podospora anserina S mat+]
gi|170936152|emb|CAP60812.1| unnamed protein product [Podospora anserina S mat+]
Length = 153
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK + VK GGR+VTGTLKGYD L+NLVLDE E +R + N
Sbjct: 60 KKENILDLKKYMDKRITVKFNGGREVTGTLKGYDALMNLVLDEVQEAVRDDEGNETTRSL 119
Query: 90 GIFVIVCFLLVCF 102
G+ V+ LLV
Sbjct: 120 GLVVVRGTLLVVI 132
>gi|332374862|gb|AEE62572.1| unknown [Dendroctonus ponderosae]
Length = 116
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD +E+LR
Sbjct: 15 MQDQKEKKRKESILDLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLR 71
>gi|326473412|gb|EGD97421.1| small nuclear ribonucleoprotein [Trichophyton tonsurans CBS 112818]
gi|326481892|gb|EGE05902.1| small nuclear ribonucleoprotein LSM7 [Trichophyton equinum CBS
127.97]
Length = 154
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK V VK GGR+VTG LKGYDQL+NLVLD+ E +R + N
Sbjct: 63 KKENILDLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSL 122
Query: 90 GIFVIVCFLLVCF 102
G+ V LLV
Sbjct: 123 GLIVARGTLLVLL 135
>gi|327294916|ref|XP_003232153.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326465325|gb|EGD90778.1| small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 147
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK V VK GGR+VTG LKGYDQL+NLVLD+ E +R + N
Sbjct: 56 KKENILDLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSL 115
Query: 90 GIFVIVCFLLVCF 102
G+ V LLV
Sbjct: 116 GLIVARGTLLVLL 128
>gi|315043418|ref|XP_003171085.1| RH73529p [Arthroderma gypseum CBS 118893]
gi|311344874|gb|EFR04077.1| RH73529p [Arthroderma gypseum CBS 118893]
Length = 151
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK V VK GGR+VTG LKGYDQL+NLVLD+ E +R + N
Sbjct: 60 KKENILDLTKYMDKEVNVKFNGGREVTGVLKGYDQLMNLVLDDVKETMRDDNDNVTTRSL 119
Query: 90 GIFVIVCFLLVCF 102
G+ V LLV
Sbjct: 120 GLIVARGTLLVLL 132
>gi|119495066|ref|XP_001264327.1| small nuclear ribonucleoprotein (LSM7), putative [Neosartorya
fischeri NRRL 181]
gi|119412489|gb|EAW22430.1| small nuclear ribonucleoprotein (LSM7), putative [Neosartorya
fischeri NRRL 181]
Length = 138
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL+K++DK V+VK GGR+V+G LKGYDQL+NLVLD+ E +R + N
Sbjct: 48 KKENILDLSKYMDKEVKVKFNGGREVSGMLKGYDQLMNLVLDDVKESMRDDEGN 101
>gi|402589800|gb|EJW83731.1| hypothetical protein WUBG_05358 [Wuchereria bancrofti]
Length = 101
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 44/58 (75%)
Query: 27 FLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
F K +KE+++DL++F+DK V+VK GGR+ +G LKGYD L+NLVLD AVE++R
Sbjct: 2 FEKEETARRKKESIVDLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVR 59
>gi|452002106|gb|EMD94564.1| hypothetical protein COCHEDRAFT_1221931 [Cochliobolus
heterostrophus C5]
Length = 135
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL---RGNL-YNGI 91
+KE +LDL+K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L GN+ Y +
Sbjct: 45 KKENILDLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDEHGNIRYRKL 104
Query: 92 FVIVC 96
+IV
Sbjct: 105 GLIVA 109
>gi|378730773|gb|EHY57232.1| small nuclear ribonucleoprotein [Exophiala dermatitidis NIH/UT8656]
Length = 138
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K+VDK + VK GGR++ GTLKGYDQL+NLVLD+ E +R + N
Sbjct: 47 KKENILDLGKYVDKQITVKFNGGREIVGTLKGYDQLMNLVLDDVKETMRDDEGNETTRPL 106
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 107 GLVVARGTLLV 117
>gi|170037644|ref|XP_001846666.1| SM protein G [Culex quinquefasciatus]
gi|167880950|gb|EDS44333.1| SM protein G [Culex quinquefasciatus]
Length = 130
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD VEFLR
Sbjct: 33 KEKRRKESILDLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTVEFLR 85
>gi|145230750|ref|XP_001389639.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus niger CBS
513.88]
gi|134055758|emb|CAK44131.1| unnamed protein product [Aspergillus niger]
gi|350638639|gb|EHA26995.1| hypothetical protein ASPNIDRAFT_205537 [Aspergillus niger ATCC
1015]
Length = 136
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL K++DK V+VK GGR+V GTLKGYDQL+NLVLD+ E +R + N
Sbjct: 46 KKENILDLNKYMDKEVRVKFNGGREVIGTLKGYDQLMNLVLDDVKESMRDDEGN 99
>gi|108743721|gb|ABG02169.1| IP12320p [Drosophila melanogaster]
Length = 287
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR
Sbjct: 190 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLR 242
>gi|296808563|ref|XP_002844620.1| U6 snRNA binding protein [Arthroderma otae CBS 113480]
gi|238844103|gb|EEQ33765.1| U6 snRNA binding protein [Arthroderma otae CBS 113480]
Length = 155
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK V VK GGR++TG LKGYDQL+NLVLD+ E +R + N
Sbjct: 64 KKENILDLTKYMDKEVNVKFNGGREITGVLKGYDQLMNLVLDDVKETMRDDNDNITTRSL 123
Query: 90 GIFVIVCFLLVCF 102
G+ V LLV
Sbjct: 124 GLIVARGTLLVLL 136
>gi|149034481|gb|EDL89218.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 91
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 44/56 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RG L
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRGEL 59
>gi|189208804|ref|XP_001940735.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976828|gb|EDU43454.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 131
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL---RGNL-YNGI 91
+KE +LDL+K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L GN+ Y +
Sbjct: 41 KKENILDLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDDEGNIRYRKL 100
Query: 92 FVIVC 96
+IV
Sbjct: 101 GLIVA 105
>gi|116193791|ref|XP_001222708.1| hypothetical protein CHGG_06613 [Chaetomium globosum CBS 148.51]
gi|88182526|gb|EAQ89994.1| hypothetical protein CHGG_06613 [Chaetomium globosum CBS 148.51]
Length = 139
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN-- 89
K +KE +LDL K++DK + VK GGR+ TG LKGYD L+NLVLDE E LR + N
Sbjct: 44 KERPKKENILDLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDEVEELLRDDEGNEM 103
Query: 90 ----GIFVIVCFLLVCF 102
G+ V+ LLV
Sbjct: 104 TRPLGLVVVRGTLLVVL 120
>gi|410080426|ref|XP_003957793.1| hypothetical protein KAFR_0F00610 [Kazachstania africana CBS
2517]
gi|372464380|emb|CCF58658.1| hypothetical protein KAFR_0F00610 [Kazachstania africana CBS
2517]
Length = 110
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
S ++E ++DLAK+ D V+VKL GGR V G LKGYDQL+NLVLDE VE+++ +
Sbjct: 18 SPKREAIIDLAKYKDSKVRVKLMGGRVVMGILKGYDQLMNLVLDETVEYIKDS 70
>gi|169648001|gb|ACA62002.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR +
Sbjct: 1 KEKXRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDS 55
>gi|296411623|ref|XP_002835529.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629315|emb|CAZ79686.1| unnamed protein product [Tuber melanosporum]
Length = 136
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 26 GFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
G+ K + +E +LDLAKF+DK + VK GGR+V G LKGYDQL+NLVLD+ E LR
Sbjct: 36 GYNKDQQERKPREAILDLAKFMDKAITVKFNGGREVVGILKGYDQLMNLVLDDVKENLR 94
>gi|118789320|ref|XP_317337.3| AGAP008122-PA [Anopheles gambiae str. PEST]
gi|116123162|gb|EAA12576.3| AGAP008122-PA [Anopheles gambiae str. PEST]
Length = 126
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD +EFLR
Sbjct: 29 KEKRRKESILDLSKYLEKTIRVKFAGGREAAGVLKGYDPLLNLVLDNTIEFLR 81
>gi|302677314|ref|XP_003028340.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune
H4-8]
gi|300102028|gb|EFI93437.1| hypothetical protein SCHCODRAFT_258381 [Schizophyllum commune
H4-8]
Length = 118
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 40/46 (86%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
R+E +LDL+K+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E
Sbjct: 31 RREAILDLSKYVNERIRVKFTGGREVTGLLKGYDQLLNLVLDEVTE 76
>gi|299473000|emb|CBN77401.1| Sm-like protein LSm7 [Ectocarpus siliculosus]
Length = 102
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 42/48 (87%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ETVLDL K++D+GV+VKL GGR+V G LKG+D L+N+VLDE +EF+R
Sbjct: 9 RETVLDLQKYLDQGVRVKLQGGREVHGVLKGFDPLVNVVLDECIEFIR 56
>gi|169648011|gb|ACA62007.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR +
Sbjct: 1 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDS 55
>gi|91089491|ref|XP_969723.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein
[Tribolium castaneum]
Length = 113
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD +E+LR
Sbjct: 16 KEKKRKESILDLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLR 68
>gi|156544990|ref|XP_001608041.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Nasonia
vitripennis]
Length = 115
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD E+LR
Sbjct: 17 KEKKRKESILDLSKYLEKNIRVKFAGGREASGILKGYDPLLNLVLDNTTEYLR 69
>gi|169647969|gb|ACA61986.1| CG13277 [Drosophila melanogaster]
gi|169647971|gb|ACA61987.1| CG13277 [Drosophila melanogaster]
gi|169647973|gb|ACA61988.1| CG13277 [Drosophila melanogaster]
gi|169647975|gb|ACA61989.1| CG13277 [Drosophila melanogaster]
gi|169647977|gb|ACA61990.1| CG13277 [Drosophila melanogaster]
gi|169647979|gb|ACA61991.1| CG13277 [Drosophila melanogaster]
gi|169647981|gb|ACA61992.1| CG13277 [Drosophila melanogaster]
gi|169647983|gb|ACA61993.1| CG13277 [Drosophila melanogaster]
gi|169647985|gb|ACA61994.1| CG13277 [Drosophila melanogaster]
gi|169647989|gb|ACA61996.1| CG13277 [Drosophila melanogaster]
gi|169647991|gb|ACA61997.1| CG13277 [Drosophila melanogaster]
gi|169647995|gb|ACA61999.1| CG13277 [Drosophila melanogaster]
gi|169647997|gb|ACA62000.1| CG13277 [Drosophila melanogaster]
gi|169647999|gb|ACA62001.1| CG13277 [Drosophila melanogaster]
gi|169648003|gb|ACA62003.1| CG13277 [Drosophila melanogaster]
gi|169648005|gb|ACA62004.1| CG13277 [Drosophila melanogaster]
gi|169648007|gb|ACA62005.1| CG13277 [Drosophila melanogaster]
gi|169648009|gb|ACA62006.1| CG13277 [Drosophila melanogaster]
gi|169648013|gb|ACA62008.1| CG13277 [Drosophila melanogaster]
gi|169648017|gb|ACA62010.1| CG13277 [Drosophila melanogaster]
gi|169648019|gb|ACA62011.1| CG13277 [Drosophila melanogaster]
gi|169648021|gb|ACA62012.1| CG13277 [Drosophila melanogaster]
gi|169648023|gb|ACA62013.1| CG13277 [Drosophila melanogaster]
gi|169648025|gb|ACA62014.1| CG13277 [Drosophila melanogaster]
gi|169648027|gb|ACA62015.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR +
Sbjct: 1 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDS 55
>gi|270012864|gb|EFA09312.1| hypothetical protein TcasGA2_TC030695, partial [Tribolium
castaneum]
Length = 104
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD +E+LR
Sbjct: 7 KEKKRKESILDLSKYLEKTIRVKFAGGREASGILKGYDPLLNLVLDNTIEYLR 59
>gi|391342642|ref|XP_003745625.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Metaseiulus occidentalis]
Length = 116
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 26 GFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
G + K ++E+++DL+K++DK ++VK GGR+VTG LKGYD LLNLV+D EFLR
Sbjct: 15 GGDQQAKPQRKRESIVDLSKYLDKLIRVKFQGGREVTGVLKGYDPLLNLVMDNTTEFLR 73
>gi|312068840|ref|XP_003137402.1| hypothetical protein LOAG_01816 [Loa loa]
Length = 130
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 42/49 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+++DL++F+DK V+VK GGR+ +G LKGYD L+NLVLD AVE++R
Sbjct: 40 KKESIVDLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVR 88
>gi|238492871|ref|XP_002377672.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
gi|317156803|ref|XP_003190769.1| U6 snRNA-associated Sm-like protein LSm7 [Aspergillus oryzae
RIB40]
gi|220696166|gb|EED52508.1| small nuclear ribonucleoprotein (LSM7), putative [Aspergillus
flavus NRRL3357]
Length = 133
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL+K++DK V+VK GGR+V GTLKG+DQL+NLVLD+ E +R + N
Sbjct: 43 KKENILDLSKYMDKEVRVKFNGGREVVGTLKGFDQLMNLVLDDVKESMRDDEGN 96
>gi|358370068|dbj|GAA86680.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 153
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+KE +LDL K++DK V+VK GGR+V G LKGYDQL+NLVLD+ E +RG
Sbjct: 46 KKENILDLNKYMDKEVRVKFNGGREVVGLLKGYDQLMNLVLDDVKESMRG 95
>gi|302921652|ref|XP_003053324.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
gi|256734264|gb|EEU47611.1| hypothetical protein NECHADRAFT_59475 [Nectria haematococca mpVI
77-13-4]
Length = 133
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK GGR+V GTLKGYD L+NLVLD+ E +R + N
Sbjct: 42 KKENILDLAKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSL 101
Query: 90 GIFVIVCFLLV 100
G+ V+ LLV
Sbjct: 102 GLVVVRGTLLV 112
>gi|393907574|gb|EFO26665.2| hypothetical protein LOAG_01816 [Loa loa]
Length = 101
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 42/49 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+++DL++F+DK V+VK GGR+ +G LKGYD L+NLVLD AVE++R
Sbjct: 11 KKESIVDLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVR 59
>gi|451845213|gb|EMD58526.1| hypothetical protein COCSADRAFT_194481 [Cochliobolus sativus
ND90Pr]
Length = 136
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL---RGNL-YNGI 91
+KE +LDL+K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L GN+ Y +
Sbjct: 46 KKENILDLSKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDEDGNIRYRKL 105
Query: 92 FVIVC 96
+IV
Sbjct: 106 GLIVA 110
>gi|449544087|gb|EMD35061.1| hypothetical protein CERSUDRAFT_85794 [Ceriporiopsis
subvermispora B]
Length = 93
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 42/49 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDLAK+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E L+
Sbjct: 5 KREAILDLAKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVEEQLQ 53
>gi|392563452|gb|EIW56631.1| U6 snRNA-associated Sm-like protein LSm7 [Trametes versicolor
FP-101664 SS1]
Length = 94
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 42/49 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDLAK+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E L+
Sbjct: 5 KREAILDLAKYVNERIRVKFTGGREVTGILKGYDQLLNLVLDEVQENLQ 53
>gi|340519781|gb|EGR50019.1| predicted protein [Trichoderma reesei QM6a]
Length = 100
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDLAK++DK + VK GGR+V GTLKGYD L+NLVLD+ E LR + N
Sbjct: 11 KKENILDLAKYMDKEIIVKFNGGREVRGTLKGYDALMNLVLDQVQETLRDDEGNESSRSL 70
Query: 90 GIFVIVCFLLV 100
G+ V+ LLV
Sbjct: 71 GLVVVRGTLLV 81
>gi|169647993|gb|ACA61998.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD VE+LR +
Sbjct: 1 KEKRRKESILDLSKYLEKQIRVKFAGGREAPGILKGYDALLNLVLDNTVEYLRDS 55
>gi|67516971|ref|XP_658371.1| hypothetical protein AN0767.2 [Aspergillus nidulans FGSC A4]
gi|40746253|gb|EAA65409.1| hypothetical protein AN0767.2 [Aspergillus nidulans FGSC A4]
gi|259488955|tpe|CBF88826.1| TPA: small nuclear ribonucleoprotein (LSM7), putative
(AFU_orthologue; AFUA_1G14290) [Aspergillus nidulans
FGSC A4]
Length = 136
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL K++DK V+VK GGR+V+G LKGYDQL+NLVLD+ E +R + N
Sbjct: 46 KKENILDLTKYMDKEVRVKFNGGREVSGILKGYDQLMNLVLDDVKESMRDDEGN 99
>gi|170585954|ref|XP_001897746.1| U6 snRNA-associated Sm-like protein LSm7 [Brugia malayi]
gi|158594770|gb|EDP33349.1| U6 snRNA-associated Sm-like protein LSm7, putative [Brugia
malayi]
Length = 101
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 42/49 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+++DL++F+DK V+VK GGR+ +G LKGYD L+NLVLD AVE++R
Sbjct: 11 KKESIVDLSRFIDKKVRVKFQGGREASGILKGYDALINLVLDNAVEYVR 59
>gi|324541578|gb|ADY49622.1| U6 snRNA-associated Sm-like protein LSm7 [Ascaris suum]
Length = 101
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 42/49 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+++DL++F+DK ++VK GGR+ +G LKGYD L+NLVLD AVE++R
Sbjct: 11 KKESIVDLSRFIDKKIRVKFQGGREASGILKGYDALINLVLDNAVEYVR 59
>gi|324523853|gb|ADY48312.1| U6 snRNA-associated Sm-like protein LSm7 [Ascaris suum]
Length = 101
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 42/49 (85%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+++DL++F+DK ++VK GGR+ +G LKGYD L+NLVLD AVE++R
Sbjct: 11 KKESIVDLSRFIDKKIRVKFQGGREASGILKGYDALINLVLDNAVEYVR 59
>gi|195114518|ref|XP_002001814.1| GI14941 [Drosophila mojavensis]
gi|195386594|ref|XP_002051989.1| GJ24083 [Drosophila virilis]
gi|193912389|gb|EDW11256.1| GI14941 [Drosophila mojavensis]
gi|194148446|gb|EDW64144.1| GJ24083 [Drosophila virilis]
Length = 110
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLR 65
>gi|195035361|ref|XP_001989146.1| GH10206 [Drosophila grimshawi]
gi|193905146|gb|EDW04013.1| GH10206 [Drosophila grimshawi]
Length = 113
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLR 65
>gi|194759991|ref|XP_001962225.1| GF14546 [Drosophila ananassae]
gi|190615922|gb|EDV31446.1| GF14546 [Drosophila ananassae]
Length = 110
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLR 65
>gi|125985551|ref|XP_001356539.1| GA12164 [Drosophila pseudoobscura pseudoobscura]
gi|195147554|ref|XP_002014744.1| GL19334 [Drosophila persimilis]
gi|54644863|gb|EAL33603.1| GA12164 [Drosophila pseudoobscura pseudoobscura]
gi|194106697|gb|EDW28740.1| GL19334 [Drosophila persimilis]
Length = 110
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLR 65
>gi|114050803|ref|NP_001040136.1| U6 snRNA-associated Sm-like protein [Bombyx mori]
gi|87248171|gb|ABD36138.1| U6 snRNA-associated Sm-like protein [Bombyx mori]
Length = 118
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD EFLR
Sbjct: 20 KEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLR 72
>gi|444315628|ref|XP_004178471.1| hypothetical protein TBLA_0B01090 [Tetrapisispora blattae CBS
6284]
gi|387511511|emb|CCH58952.1| hypothetical protein TBLA_0B01090 [Tetrapisispora blattae CBS
6284]
Length = 142
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
R+E ++DL+K+ D V+VKL GGR V G LKGYDQL+NLVLDE +E++R
Sbjct: 50 RREAIVDLSKYKDSKVRVKLMGGRLVIGILKGYDQLMNLVLDETIEYIR 98
>gi|327351953|gb|EGE80810.1| U6 snRNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 165
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 74 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSL 133
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 134 GLIVARGTLLV 144
>gi|239612791|gb|EEQ89778.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 164
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 73 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSL 132
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 133 GLIVARGTLLV 143
>gi|261194282|ref|XP_002623546.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239588560|gb|EEQ71203.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 160
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 69 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVKETMRDDEGNQTTRSL 128
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 129 GLIVARGTLLV 139
>gi|195436750|ref|XP_002066318.1| GK18159 [Drosophila willistoni]
gi|194162403|gb|EDW77304.1| GK18159 [Drosophila willistoni]
Length = 110
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLR 65
>gi|396489534|ref|XP_003843128.1| hypothetical protein LEMA_P088880.1 [Leptosphaeria maculans JN3]
gi|312219706|emb|CBX99649.1| hypothetical protein LEMA_P088880.1 [Leptosphaeria maculans JN3]
Length = 202
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK + VK +GGR+V GTLKGYDQL+NLVLDE E L + N
Sbjct: 111 KKENILDLNKYMDKQITVKFSGGREVIGTLKGYDQLMNLVLDEVKEALTDDEGNIRYRKL 170
Query: 90 GIFVIVCFLLVCF 102
G+ V LLV
Sbjct: 171 GLIVARGTLLVVI 183
>gi|20129565|ref|NP_609807.1| LSm7, isoform A [Drosophila melanogaster]
gi|386769700|ref|NP_001246045.1| LSm7, isoform B [Drosophila melanogaster]
gi|194884417|ref|XP_001976253.1| GG20109 [Drosophila erecta]
gi|195344568|ref|XP_002038853.1| GM17159 [Drosophila sechellia]
gi|195484003|ref|XP_002090522.1| GE13166 [Drosophila yakuba]
gi|195579644|ref|XP_002079671.1| GD21898 [Drosophila simulans]
gi|7298334|gb|AAF53562.1| LSm7, isoform A [Drosophila melanogaster]
gi|21064825|gb|AAM29642.1| RH73529p [Drosophila melanogaster]
gi|190659440|gb|EDV56653.1| GG20109 [Drosophila erecta]
gi|194133983|gb|EDW55499.1| GM17159 [Drosophila sechellia]
gi|194176623|gb|EDW90234.1| GE13166 [Drosophila yakuba]
gi|194191680|gb|EDX05256.1| GD21898 [Drosophila simulans]
gi|383291517|gb|AFH03719.1| LSm7, isoform B [Drosophila melanogaster]
Length = 110
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD VE+LR
Sbjct: 13 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLR 65
>gi|453087944|gb|EMF15985.1| U6 snRNA-associated Sm-like protein LSm7 [Mycosphaerella populorum
SO2202]
Length = 134
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL+K+++KG+ VK GGR+VTGTLKG+DQL+NLVLD E R N
Sbjct: 41 KKENILDLSKYLEKGITVKFNGGREVTGTLKGFDQLMNLVLDNVKETTRDEEGNTSTRNL 100
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 101 GLLVARGTLLV 111
>gi|307194533|gb|EFN76825.1| U6 snRNA-associated Sm-like protein LSm7 [Harpegnathos saltator]
Length = 107
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LR
Sbjct: 9 KEKKRKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLR 61
>gi|389611325|dbj|BAM19274.1| SM protein G, putative [Papilio polytes]
Length = 118
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD EFLR
Sbjct: 20 KEKRRKESILDLSKYLEKSIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLR 72
>gi|225561488|gb|EEH09768.1| predicted protein [Ajellomyces capsulatus G186AR]
Length = 174
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 83 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSL 142
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 143 GLIVARGTLLV 153
>gi|154282731|ref|XP_001542161.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410341|gb|EDN05729.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 171
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 80 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSL 139
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 140 GLIVARGTLLV 150
>gi|383847376|ref|XP_003699330.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Megachile rotundata]
Length = 115
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LR
Sbjct: 17 KERKRKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLR 69
>gi|346977239|gb|EGY20691.1| hypothetical protein VDAG_10320 [Verticillium dahliae VdLs.17]
Length = 140
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+KE +LDL K++DK + VK GGR+VTGTLKGYD L+NLVLD+ E +R +
Sbjct: 49 KKENILDLGKYMDKKITVKFNGGREVTGTLKGYDALMNLVLDDVEEVMRDD 99
>gi|302419873|ref|XP_003007767.1| RH73529p [Verticillium albo-atrum VaMs.102]
gi|261353418|gb|EEY15846.1| RH73529p [Verticillium albo-atrum VaMs.102]
Length = 141
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+KE +LDL K++DK + VK GGR+VTGTLKGYD L+NLVLD+ E +R +
Sbjct: 50 KKENILDLGKYMDKKITVKFNGGREVTGTLKGYDALMNLVLDDVEEVMRDD 100
>gi|240274594|gb|EER38110.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325090925|gb|EGC44235.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 169
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K+++K V VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 78 KKENILDLTKYMEKEVCVKFNGGREVTGTLKGYDQLMNLVLDDVREVMRDDEGNQTTRSL 137
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 138 GLIVARGTLLV 148
>gi|148699537|gb|EDL31484.1| mCG12127, isoform CRA_e [Mus musculus]
Length = 78
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 43/55 (78%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++RG
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMRGE 58
>gi|19075840|ref|NP_588340.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626865|sp|O74499.1|LSM7_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|3581912|emb|CAA20851.1| U6 snRNP-associated protein Lsm7 (predicted) [Schizosaccharomyces
pombe]
Length = 113
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNG 90
RKE++LDL+++ D+ +Q TGGRQ+TG LKG+DQL+NLVLD+ E LR N +G
Sbjct: 21 RKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR-NPEDG 74
>gi|169648015|gb|ACA62009.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 42/55 (76%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K RKE++LDL+K+++K ++ K GGR+ +G LKGYD LLNLVLD VE+LR +
Sbjct: 1 KEKRRKESILDLSKYLEKQIRAKFAGGREASGILKGYDALLNLVLDNTVEYLRDS 55
>gi|401889144|gb|EJT53084.1| hypothetical protein A1Q1_00091 [Trichosporon asahii var. asahii
CBS 2479]
Length = 82
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 42/52 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
++E++L+LA++VD+ ++VK GGR+VTG LKGYDQL+NLV+DE VE L
Sbjct: 25 KRESILNLAQYVDQSIRVKFLGGREVTGVLKGYDQLMNLVMDEVVETYESEL 76
>gi|354459631|pdb|3SWN|C Chain C, Structure Of The Lsm657 Complex: An Assembly
Intermediate Of The Lsm1 7 And Lsm2 8 Rings
gi|354459634|pdb|3SWN|F Chain F, Structure Of The Lsm657 Complex: An Assembly
Intermediate Of The Lsm1 7 And Lsm2 8 Rings
gi|354459637|pdb|3SWN|O Chain O, Structure Of The Lsm657 Complex: An Assembly
Intermediate Of The Lsm1 7 And Lsm2 8 Rings
gi|354459640|pdb|3SWN|R Chain R, Structure Of The Lsm657 Complex: An Assembly
Intermediate Of The Lsm1 7 And Lsm2 8 Rings
Length = 117
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNG 90
RKE++LDL+++ D+ +Q TGGRQ+TG LKG+DQL+NLVLD+ E LR N +G
Sbjct: 25 RKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLR-NPEDG 78
>gi|343427570|emb|CBQ71097.1| related to snRNP protein [Sporisorium reilianum SRZ2]
Length = 143
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 43/54 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL+K++D+ ++VK GGR+V GTLKG+DQL+NLV+DE E LR + N
Sbjct: 52 KKEAILDLSKYMDQKIRVKFAGGREVFGTLKGFDQLMNLVMDEVTESLRDDEGN 105
>gi|332024943|gb|EGI65130.1| U6 snRNA-associated Sm-like protein LSm7 [Acromyrmex echinatior]
Length = 123
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LR
Sbjct: 25 KEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLR 77
>gi|440634700|gb|ELR04619.1| hypothetical protein GMDG_06901 [Geomyces destructans 20631-21]
Length = 137
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL+K++DK + VK GGR+VTG LKGYD L+NLVLD+ E LR + N
Sbjct: 47 KKENILDLSKYMDKRITVKFNGGREVTGALKGYDALMNLVLDDVQEVLRDDDGNETTRSL 106
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 107 GLVVARGTLLV 117
>gi|449296389|gb|EMC92409.1| hypothetical protein BAUCODRAFT_287708 [Baudoinia compniacensis
UAMH 10762]
Length = 133
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR---GNLYN--- 89
+KE +LDL K++DK + VK GGR+VTG LKGYDQL+NLVLD E R GNL
Sbjct: 41 KKENILDLTKYMDKDITVKFNGGREVTGLLKGYDQLMNLVLDNVKEITRDDEGNLSTRSL 100
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 101 GLLVARGTLLV 111
>gi|307177329|gb|EFN66502.1| U6 snRNA-associated Sm-like protein LSm7 [Camponotus floridanus]
Length = 111
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LR
Sbjct: 13 KEKKRKESILDLSKYLEKNIRVKFAGGREAEGILKGYDPLLNLVLDNTKEYLR 65
>gi|242773724|ref|XP_002478297.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
stipitatus ATCC 10500]
gi|218721916|gb|EED21334.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
stipitatus ATCC 10500]
Length = 144
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK V VK GGR+V+G LKGYDQL+NLVLD+ E +R N
Sbjct: 54 KKENILDLTKYMDKEVNVKFNGGREVSGILKGYDQLMNLVLDDVKEKMRDESGNETTRSL 113
Query: 90 GIFVIVCFLLV 100
G+ V LLV
Sbjct: 114 GLIVARGTLLV 124
>gi|58261590|ref|XP_568205.1| U6 snRNA binding protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115921|ref|XP_773347.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255971|gb|EAL18700.1| hypothetical protein CNBI2880 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230287|gb|AAW46688.1| U6 snRNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 131
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 40/46 (86%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E++L+LA+FVDK ++VK GGR+ TG LKGYDQL+NLV+D+ VE
Sbjct: 22 KRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVE 67
>gi|363754719|ref|XP_003647575.1| hypothetical protein Ecym_6383 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891212|gb|AET40758.1| hypothetical protein Ecym_6383 [Eremothecium cymbalariae
DBVPG#7215]
Length = 119
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 40/49 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDLAK+ D V+VK+ GGR V G LKGYD+L+NLVLDE VE+LR
Sbjct: 27 KREAILDLAKYKDTKVRVKVMGGRLVIGILKGYDELMNLVLDETVEYLR 75
>gi|340975579|gb|EGS22694.1| hypothetical protein CTHT_0011670 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 148
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN-- 89
K +KE +LDL K++DK + VK GGR+ TG LKGYD L+NLVLD+ E LR + N
Sbjct: 54 KERPKKENILDLKKYMDKRITVKFNGGREATGVLKGYDALMNLVLDDVEELLRDDEGNEM 113
Query: 90 ----GIFVIVCFLLV 100
G+ V+ LLV
Sbjct: 114 TRPLGLVVVRGTLLV 128
>gi|389738918|gb|EIM80113.1| U6 snRNA-associated Sm-like protein LSm7, partial [Stereum
hirsutum FP-91666 SS1]
Length = 99
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 40/46 (86%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E +LDL+K+V++ ++VK TGGR+VTG LKGYDQLLNLVLDE E
Sbjct: 12 KREAILDLSKYVNERIRVKFTGGREVTGVLKGYDQLLNLVLDEVQE 57
>gi|321464723|gb|EFX75729.1| hypothetical protein DAPPUDRAFT_306642 [Daphnia pulex]
Length = 116
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 41/51 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+KE +LDL++++DK ++VK TGGR+ G LKGYD LLN+VLD VE+LR +
Sbjct: 23 KKERILDLSRYMDKLIRVKFTGGREAAGILKGYDPLLNIVLDNTVEYLRDS 73
>gi|167527011|ref|XP_001747838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773587|gb|EDQ87225.1| predicted protein [Monosiga brevicollis MX1]
Length = 126
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +++L +F DK ++VK GGR+VTG LKG+DQLLN+VLD+A E+LR
Sbjct: 32 KRENIIELDRFTDKRIRVKFAGGREVTGILKGHDQLLNMVLDDAQEYLR 80
>gi|357613355|gb|EHJ68454.1| U6 snRNA-associated Sm-like protein [Danaus plexippus]
Length = 116
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD EFLR
Sbjct: 19 KEKRRKESILDLSKYLEKCIRVKFAGGREAAGILKGYDPLLNLVLDNTTEFLR 71
>gi|321263450|ref|XP_003196443.1| U6 snRNA binding protein [Cryptococcus gattii WM276]
gi|317462919|gb|ADV24656.1| U6 snRNA binding protein, putative [Cryptococcus gattii WM276]
Length = 111
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 40/46 (86%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E++L+LA+FVDK ++VK GGR+ TG LKGYDQL+NLV+D+ VE
Sbjct: 22 KRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVE 67
>gi|46130650|ref|XP_389105.1| hypothetical protein FG08929.1 [Gibberella zeae PH-1]
gi|408391559|gb|EKJ70933.1| hypothetical protein FPSE_08901 [Fusarium pseudograminearum CS3096]
Length = 131
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK + VK GGR+V GTLKGYD L+NLVLD+ E +R + N
Sbjct: 40 KKENILDLGKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSL 99
Query: 90 GIFVIVCFLLV 100
G+ V+ LLV
Sbjct: 100 GLVVVRGTLLV 110
>gi|342886030|gb|EGU85973.1| hypothetical protein FOXB_03482 [Fusarium oxysporum Fo5176]
Length = 133
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++DK + VK GGR+V GTLKGYD L+NLVLD+ E +R + N
Sbjct: 42 KKENILDLGKYMDKQITVKFNGGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNDSTRSL 101
Query: 90 GIFVIVCFLLV 100
G+ V+ LLV
Sbjct: 102 GLVVVRGTLLV 112
>gi|405119724|gb|AFR94496.1| U6 snRNA binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 131
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 40/46 (86%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E++L+LA+FVDK ++VK GGR+ TG LKGYDQL+NLV+D+ VE
Sbjct: 22 KRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNLVMDDVVE 67
>gi|71012485|ref|XP_758502.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
gi|46098160|gb|EAK83393.1| hypothetical protein UM02355.1 [Ustilago maydis 521]
Length = 175
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +LDL+K++D+ ++VK GGR+V GTLKG+DQL+NLV+DE E +R
Sbjct: 84 KKEAILDLSKYMDQKIRVKFAGGREVFGTLKGFDQLMNLVMDEVTESVR 132
>gi|405951657|gb|EKC19551.1| U6 snRNA-associated Sm-like protein LSm7 [Crassostrea gigas]
gi|405960030|gb|EKC25982.1| U6 snRNA-associated Sm-like protein LSm7 [Crassostrea gigas]
Length = 113
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
T+LDLAK++DK ++VK +GGR+ G LKGYD LLNLVLD+ E+LR
Sbjct: 23 TILDLAKYLDKTIRVKFSGGREAAGVLKGYDPLLNLVLDDTTEYLR 68
>gi|225709346|gb|ACO10519.1| U6 snRNA-associated Sm-like protein LSm7 [Caligus rogercresseyi]
Length = 112
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE++L+LAK+++K ++VK GGR+ +GTLKGYD LLNLVLD E+LR
Sbjct: 19 KKESILELAKYLEKDIRVKFIGGRECSGTLKGYDPLLNLVLDNVTEYLR 67
>gi|344306981|ref|XP_003422161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Loxodonta africana]
Length = 132
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 33 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 85
>gi|284413764|ref|NP_001165133.1| LSM7 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
Length = 103
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKAIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|430812263|emb|CCJ30291.1| unnamed protein product [Pneumocystis jirovecii]
Length = 121
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 8/75 (10%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR---GNLYN--- 89
+KE +LDLAK+ D+ V+VK GGR++ G LKGYD L+NLVLDE +E LR GN+ +
Sbjct: 28 KKEAILDLAKYKDQKVRVKFAGGREIVGILKGYDLLMNLVLDEVIENLRDEDGNITDQKR 87
Query: 90 --GIFVIVCFLLVCF 102
G+ VI L+ F
Sbjct: 88 QLGLVVIRGTTLILF 102
>gi|388580059|gb|EIM20377.1| U6 snRNA-associated Sm-like protein LSm7 [Wallemia sebi CBS
633.66]
Length = 98
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +LDL++FVD+ +++K GGR+ TG LKGYDQL+NLV+D+ VE L+
Sbjct: 14 KKEAILDLSRFVDQSLRLKFQGGREATGILKGYDQLMNLVMDDVVEILQ 62
>gi|328791249|ref|XP_003251537.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 isoform 2
[Apis mellifera]
gi|350407868|ref|XP_003488222.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Bombus
impatiens]
gi|380018582|ref|XP_003693206.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Apis florea]
Length = 113
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LR
Sbjct: 15 KERKKKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLR 67
>gi|260795474|ref|XP_002592730.1| hypothetical protein BRAFLDRAFT_118403 [Branchiostoma floridae]
gi|229277953|gb|EEN48741.1| hypothetical protein BRAFLDRAFT_118403 [Branchiostoma floridae]
Length = 116
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KET+LDL+K++DK ++VK GGR+ +G LKGYD LLNLVLD E+ R
Sbjct: 22 KKETILDLSKYLDKPIRVKFHGGREASGVLKGYDPLLNLVLDNTTEYQR 70
>gi|254585355|ref|XP_002498245.1| ZYRO0G05720p [Zygosaccharomyces rouxii]
gi|238941139|emb|CAR29312.1| ZYRO0G05720p [Zygosaccharomyces rouxii]
Length = 116
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +L+LAK+ D V+VKL GGR V G LKGYDQL+NLVLDE +E++R
Sbjct: 24 KREAILNLAKYKDTKVRVKLMGGRLVVGVLKGYDQLMNLVLDETIEYMR 72
>gi|328791247|ref|XP_001121212.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 isoform 1
[Apis mellifera]
gi|380018580|ref|XP_003693205.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Apis florea]
Length = 109
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LR
Sbjct: 11 KERKKKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLR 63
>gi|73987505|ref|XP_854995.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Canis lupus
familiaris]
gi|410949919|ref|XP_003981664.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Felis catus]
Length = 103
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD VE++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTVEYMR 56
>gi|355702951|gb|EHH29442.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
Length = 122
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 23 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 75
>gi|242009022|ref|XP_002425292.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212509057|gb|EEB12554.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 109
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ G LKG+D LLNLVLD EFLR
Sbjct: 11 KEKKRKESILDLSKYLEKSIRVKFAGGREAAGILKGFDPLLNLVLDNTTEFLR 63
>gi|340721932|ref|XP_003399367.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like [Bombus
terrestris]
Length = 113
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K+++K ++VK GGR+ G LKGYD LLNLVLD E+LR
Sbjct: 15 KERKKKESILDLSKYLEKNIRVKFAGGREAAGILKGYDPLLNLVLDNTTEYLR 67
>gi|387016782|gb|AFJ50510.1| u6 snRNA-associated Sm-like protein LSm7-like [Crotalus
adamanteus]
Length = 103
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD VE++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTVEYMR 56
>gi|301781078|ref|XP_002925960.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Ailuropoda melanoleuca]
Length = 110
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD VE++R
Sbjct: 11 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTVEYMR 63
>gi|348549932|ref|XP_003460787.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Cavia
porcellus]
Length = 154
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 55 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 107
>gi|225713984|gb|ACO12838.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus
salmonis]
gi|290563008|gb|ADD38898.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus
salmonis]
Length = 111
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 18 SARVSFNLGFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD 77
S+ + N G + K +KE++L+LA++++K ++VK GGR+ +GTLKGYD LLNLVLD
Sbjct: 2 SSGTASNTGASSADKR--KKESILELARYLEKDIRVKFIGGRECSGTLKGYDPLLNLVLD 59
Query: 78 EAVEFLR 84
E+LR
Sbjct: 60 NVTEYLR 66
>gi|115492179|ref|XP_001210717.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197577|gb|EAU39277.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 132
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL K++DK V+VK GGR+V G LKGYDQL+NLVLD+ E +R + N
Sbjct: 42 KKENILDLTKYMDKEVRVKFNGGREVLGLLKGYDQLMNLVLDDVKETMRDDEGN 95
>gi|390981169|pdb|4EMK|C Chain C, Crystal Structure Of Splsm567
Length = 113
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNG 90
RKE++LDL+++ D+ +Q TGGRQ+TG LKG+DQL NLVLD+ E LR N +G
Sbjct: 21 RKESILDLSRYQDQRIQATFTGGRQITGILKGFDQLXNLVLDDVEEQLR-NPEDG 74
>gi|156383890|ref|XP_001633065.1| predicted protein [Nematostella vectensis]
gi|156220130|gb|EDO41002.1| predicted protein [Nematostella vectensis]
Length = 102
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 40/49 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K+++ DL+KF+DKGV+VK GGR+ +G LKG+D LLNLVLD +E+LR
Sbjct: 8 EKKSIFDLSKFLDKGVRVKFQGGREASGVLKGFDALLNLVLDNTIEYLR 56
>gi|431922251|gb|ELK19342.1| U6 snRNA-associated Sm-like protein LSm7 [Pteropus alecto]
Length = 103
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 56
>gi|7706423|ref|NP_057283.1| U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|219804601|ref|NP_001137334.1| U6 snRNA-associated Sm-like protein LSm7 [Bos taurus]
gi|114674535|ref|XP_512258.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Pan
troglodytes]
gi|311248306|ref|XP_003123072.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Sus
scrofa]
gi|332255874|ref|XP_003277052.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Nomascus
leucogenys]
gi|397496951|ref|XP_003819284.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Pan
paniscus]
gi|402903635|ref|XP_003914668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Papio
anubis]
gi|403273733|ref|XP_003928656.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Saimiri
boliviensis boliviensis]
gi|426229199|ref|XP_004008679.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Ovis aries]
gi|426386553|ref|XP_004059748.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Gorilla
gorilla gorilla]
gi|10720075|sp|Q9UK45.1|LSM7_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|5919155|gb|AAD56231.1|AF182293_1 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|12018382|gb|AAG45442.1|AC005258_2 U6 snRNA-associated Sm-like protein LSm7 [Homo sapiens]
gi|17391362|gb|AAH18621.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|123996969|gb|ABM86086.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|123997451|gb|ABM86327.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|157928972|gb|ABW03771.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[synthetic construct]
gi|296485626|tpg|DAA27741.1| TPA: LSM7 homolog, U6 small nuclear RNA associated [Bos taurus]
gi|351703671|gb|EHB06590.1| U6 snRNA-associated Sm-like protein LSm7 [Heterocephalus glaber]
gi|383419119|gb|AFH32773.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
gi|384940076|gb|AFI33643.1| U6 snRNA-associated Sm-like protein LSm7 [Macaca mulatta]
gi|410212872|gb|JAA03655.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410248364|gb|JAA12149.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410299120|gb|JAA28160.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410333089|gb|JAA35491.1| LSM7 homolog, U6 small nuclear RNA associated [Pan troglodytes]
Length = 103
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 56
>gi|395831650|ref|XP_003788908.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Otolemur
garnettii]
Length = 168
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 69 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 121
>gi|328869356|gb|EGG17734.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 106
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 31 LKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ + +KE++LDL KF+ KG+ VK TGGR+V G LKGYD L+N+ LD+ E++R
Sbjct: 1 MSTAPKKESILDLQKFLGKGISVKFTGGREVQGILKGYDPLVNITLDQCEEYIR 54
>gi|443727637|gb|ELU14316.1| hypothetical protein CAPTEDRAFT_142894, partial [Capitella
teleta]
Length = 56
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
K +KET+LDL+K++DK V+VK +GGR+ G LKG+D LLNLVLD E LRG
Sbjct: 2 KEKKKKETILDLSKYLDKPVRVKFSGGREACGILKGFDPLLNLVLDGCTENLRG 55
>gi|297703033|ref|XP_002828459.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Pongo
abelii]
Length = 103
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 56
>gi|148231641|ref|NP_001086126.1| LSM7 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|49522817|gb|AAH74231.1| MGC83430 protein [Xenopus laevis]
Length = 103
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|432116914|gb|ELK37501.1| U6 snRNA-associated Sm-like protein LSm7, partial [Myotis
davidii]
Length = 101
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 2 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 54
>gi|354480892|ref|XP_003502637.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Cricetulus griseus]
gi|344243439|gb|EGV99542.1| U6 snRNA-associated Sm-like protein LSm7 [Cricetulus griseus]
Length = 104
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 5 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 57
>gi|157823717|ref|NP_001102202.1| U6 snRNA-associated Sm-like protein LSm7 [Rattus norvegicus]
gi|149034482|gb|EDL89219.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_d [Rattus norvegicus]
Length = 103
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 56
>gi|299740998|ref|XP_001834148.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
gi|298404507|gb|EAU87644.2| hypothetical protein CC1G_09105 [Coprinopsis cinerea
okayama7#130]
Length = 107
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 39/46 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E +LDL+K+V++ ++VK TGGR+V G LKGYDQLLNLVLDE E
Sbjct: 19 KREAILDLSKYVNEKIRVKFTGGREVIGVLKGYDQLLNLVLDEVEE 64
>gi|126323619|ref|XP_001372576.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Monodelphis domestica]
Length = 103
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 56
>gi|212531689|ref|XP_002146001.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
marneffei ATCC 18224]
gi|210071365|gb|EEA25454.1| small nuclear ribonucleoprotein (LSM7), putative [Talaromyces
marneffei ATCC 18224]
Length = 150
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +LDL K++DK V VK GGR+V+G LKGYDQL+NLVLD+ E +R
Sbjct: 60 KKENILDLTKYMDKEVIVKFNGGREVSGILKGYDQLMNLVLDDVKEKMR 108
>gi|169647987|gb|ACA61995.1| CG13277 [Drosophila melanogaster]
Length = 98
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K RKE++LDL+K+++K ++VK GGR+ +G LKGYD LLNLVLD V +LR
Sbjct: 1 KEKRRKESILDLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVGYLR 53
>gi|156847090|ref|XP_001646430.1| hypothetical protein Kpol_1048p2 [Vanderwaltozyma polyspora DSM
70294]
gi|156117107|gb|EDO18572.1| hypothetical protein Kpol_1048p2 [Vanderwaltozyma polyspora DSM
70294]
Length = 126
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 39/49 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E ++DLAK+ D ++VKL GGR VTG LKGYD L+ LVLDE VE+LR
Sbjct: 34 KREAIVDLAKYKDTKIRVKLMGGRLVTGVLKGYDPLMTLVLDETVEYLR 82
>gi|255711522|ref|XP_002552044.1| KLTH0B05896p [Lachancea thermotolerans]
gi|238933422|emb|CAR21606.1| KLTH0B05896p [Lachancea thermotolerans CBS 6340]
Length = 111
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +++L+K+ D ++VKL GGR V G LKGYDQL+NLVLDE VE LR
Sbjct: 15 KREAIVNLSKYADNKIRVKLAGGRLVVGVLKGYDQLMNLVLDETVEHLR 63
>gi|367041894|ref|XP_003651327.1| hypothetical protein THITE_2111451 [Thielavia terrestris NRRL 8126]
gi|346998589|gb|AEO64991.1| hypothetical protein THITE_2111451 [Thielavia terrestris NRRL 8126]
Length = 155
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN-- 89
K +KE +LDL K++D+ + VK GGR+ TG LKGYD L+NLVLD+ E LR + N
Sbjct: 60 KERPKKENILDLKKYMDQRITVKFNGGREATGVLKGYDALMNLVLDDVEEVLRDDEGNTT 119
Query: 90 ----GIFVIVCFLLVC 101
G+ V+ LLV
Sbjct: 120 TRPLGLVVVRGTLLVV 135
>gi|409043237|gb|EKM52720.1| hypothetical protein PHACADRAFT_261323 [Phanerochaete carnosa
HHB-10118-sp]
Length = 94
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDLAK+V++ ++VK TGGR+VTG LKG+DQLLNLVLD+ E L
Sbjct: 5 KREAILDLAKYVNERIRVKFTGGREVTGVLKGFDQLLNLVLDDVEEQLH 53
>gi|13384714|ref|NP_079625.1| U6 snRNA-associated Sm-like protein LSm7 [Mus musculus]
gi|52783146|sp|Q9CQQ8.1|LSM7_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|12833484|dbj|BAB22540.1| unnamed protein product [Mus musculus]
gi|12841027|dbj|BAB25051.1| unnamed protein product [Mus musculus]
gi|12849195|dbj|BAB28245.1| unnamed protein product [Mus musculus]
gi|12850664|dbj|BAB28806.1| unnamed protein product [Mus musculus]
gi|20380289|gb|AAH27511.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|51980691|gb|AAH81444.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|148699536|gb|EDL31483.1| mCG12127, isoform CRA_d [Mus musculus]
gi|148699790|gb|EDL31737.1| mCG5973 [Mus musculus]
Length = 103
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMR 56
>gi|387915654|gb|AFK11436.1| u6 snRNA-associated Sm-like protein LSm7-like protein
[Callorhinchus milii]
gi|392880576|gb|AFM89120.1| u6 snRNA-associated Sm-like protein LSm7-like protein
[Callorhinchus milii]
Length = 103
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYVR 56
>gi|225717318|gb|ACO14505.1| U6 snRNA-associated Sm-like protein LSm7 [Esox lucius]
Length = 111
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 40/49 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LR
Sbjct: 16 KKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR 64
>gi|148699534|gb|EDL31481.1| mCG12127, isoform CRA_b [Mus musculus]
Length = 114
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 15 KEKKKKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMR 67
>gi|449685039|ref|XP_004210789.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
1 [Hydra magnipapillata]
gi|449685041|ref|XP_004210790.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
2 [Hydra magnipapillata]
gi|449685043|ref|XP_004210791.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
3 [Hydra magnipapillata]
gi|449685045|ref|XP_004210792.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like isoform
4 [Hydra magnipapillata]
Length = 102
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 39/50 (78%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+K ++LDL +F+DK ++VK +GGR+V G LKG+D LLN+VLD EF+R
Sbjct: 7 AKKTSILDLTRFMDKAIRVKFSGGREVAGVLKGFDHLLNIVLDNCTEFIR 56
>gi|164661255|ref|XP_001731750.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
gi|159105651|gb|EDP44536.1| hypothetical protein MGL_1018 [Malassezia globosa CBS 7966]
Length = 130
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNG 90
+KE +L+LAK+VDK ++VK GGR+V GTLKGYDQL+ LV+D+ VE ++ + NG
Sbjct: 38 KKEAILNLAKYVDKEIRVKFMGGREVVGTLKGYDQLMTLVMDD-VEEIKHDPSNG 91
>gi|336463585|gb|EGO51825.1| hypothetical protein NEUTE1DRAFT_53111 [Neurospora tetrasperma FGSC
2508]
Length = 144
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------ 89
+KE +LDL K++D+ + VK GGR+VTGTLKGYD L+NLVLD+ E +R N
Sbjct: 52 KKENILDLKKYMDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVRDEEGNETTRPL 111
Query: 90 GIFVIVCFLLVCF 102
G+ V LLV
Sbjct: 112 GLVVARGTLLVVI 124
>gi|196002890|ref|XP_002111312.1| hypothetical protein TRIADDRAFT_55150 [Trichoplax adhaerens]
gi|190585211|gb|EDV25279.1| hypothetical protein TRIADDRAFT_55150 [Trichoplax adhaerens]
Length = 102
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E+++DL K +DK V+VK GGR+ G LKGYD LLNLVLD AVE LR
Sbjct: 9 KRESIVDLQKHIDKKVRVKFQGGREAIGILKGYDPLLNLVLDNAVENLR 57
>gi|449682170|ref|XP_002165913.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Hydra
magnipapillata]
Length = 133
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 29 KSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +K ++LDL +F+DK ++VK +GGR+V G LKG+D LLN+VLD EF+R
Sbjct: 32 KEDDRKAKKTSILDLTRFMDKAIRVKFSGGREVAGVLKGFDHLLNIVLDNCTEFIR 87
>gi|432853545|ref|XP_004067760.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Oryzias
latipes]
Length = 103
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|313213028|emb|CBY36907.1| unnamed protein product [Oikopleura dioica]
gi|313234529|emb|CBY10486.1| unnamed protein product [Oikopleura dioica]
Length = 106
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K + +KE++L+L K++DK ++VK GGR+ +G LKG+DQLLNLV+D E LR
Sbjct: 10 KQAKKKESILELNKYLDKAIRVKFQGGREASGILKGFDQLLNLVIDSTTEQLR 62
>gi|443684081|gb|ELT88113.1| hypothetical protein CAPTEDRAFT_124620, partial [Capitella
teleta]
Length = 100
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KET+LDL+K++DK V+VK +GGR+ G LKG+D LLNLVLD E LR
Sbjct: 2 KEKKKKETILDLSKYLDKPVRVKFSGGREACGILKGFDPLLNLVLDGCTENLR 54
>gi|388854666|emb|CCF51823.1| related to snRNP protein [Ustilago hordei]
Length = 142
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+KE +LDL K++D+ ++VK GGR+V G LKG+DQL+NLV+DE E LR N
Sbjct: 54 KKEAILDLTKYIDQKIRVKFAGGREVFGILKGFDQLMNLVMDEVTESLRDEEGN 107
>gi|47225688|emb|CAG08031.1| unnamed protein product [Tetraodon nigroviridis]
Length = 102
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|392580035|gb|EIW73162.1| hypothetical protein TREMEDRAFT_24108, partial [Tremella
mesenterica DSM 1558]
Length = 79
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 40/46 (86%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E++L+LA +VDK ++VK G R+VTGTLKG+DQL+NLV+D+ VE
Sbjct: 4 KRESILNLANYVDKSIRVKFMGAREVTGTLKGFDQLMNLVMDDVVE 49
>gi|400600902|gb|EJP68570.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 255
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +LDL K++DK + VK GGR+V GTLKG+D L+NLVLD+ E +R
Sbjct: 163 PKKENILDLTKYMDKQITVKFNGGREVMGTLKGFDALMNLVLDDVQETVR 212
>gi|410921512|ref|XP_003974227.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Takifugu rubripes]
Length = 103
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|428181541|gb|EKX50404.1| hypothetical protein GUITHDRAFT_103637 [Guillardia theta
CCMP2712]
Length = 98
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 42/51 (82%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ +K+ VLDL++ VD+ V+VK +GGR+V G LKG+D L+NLVLDE +E++R
Sbjct: 3 ADKKQAVLDLSRHVDQKVRVKFSGGREVEGRLKGFDTLVNLVLDECIEYIR 53
>gi|348504874|ref|XP_003439986.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Oreochromis niloticus]
Length = 103
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KDKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|403217282|emb|CCK71777.1| hypothetical protein KNAG_0H03630 [Kazachstania naganishii CBS
8797]
Length = 119
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
S ++E ++DLAK+ D V+VKL G + V G LKGYDQL+NLVLDE E+L+
Sbjct: 27 SPKREAIVDLAKYKDSKVRVKLMGDKLVVGVLKGYDQLMNLVLDETAEYLK 77
>gi|66804897|ref|XP_636181.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74852197|sp|Q54HF6.1|LSM7_DICDI RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm7
gi|60464543|gb|EAL62681.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 97
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ +KE++LDL KF+ K + VK TGGR+V G LKGYDQL+N+ LD+ EF+R
Sbjct: 6 NPKKESILDLQKFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTQEFIR 56
>gi|114158715|ref|NP_001041471.1| LSM7 homolog, U6 small nuclear RNA associated [Danio rerio]
gi|133778786|gb|AAI33958.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Danio rerio]
Length = 103
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KDKKKKESIFDLSKYIDKHIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|240848877|ref|NP_001155739.1| LSM7 homolog, U6 small nuclear RNA associated (S.
cerevisiae)-like [Acyrthosiphon pisum]
gi|239790049|dbj|BAH71610.1| ACYPI008033 [Acyrthosiphon pisum]
Length = 107
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 43/55 (78%)
Query: 30 SLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
S +KE++LDL ++++K ++VK +GGR+V+G LKG+D L+NLVLD +E+LR
Sbjct: 8 SAPEKKKKESILDLTRYLEKAIRVKFSGGREVSGILKGFDPLVNLVLDNTLEYLR 62
>gi|256269021|gb|EEU04361.1| Lsm7p [Saccharomyces cerevisiae JAY291]
Length = 108
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++
Sbjct: 16 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM 63
>gi|281207655|gb|EFA81835.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 110
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE++LDL KF+ KG+ VK TGGR+V G LKGYD L+N+ LD EF+R
Sbjct: 8 KKESILDLQKFLGKGLTVKFTGGREVQGILKGYDPLVNITLDNCEEFIR 56
>gi|854491|emb|CAA86879.1| orf2 [Saccharomyces cerevisiae]
gi|1302101|emb|CAA96030.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190409133|gb|EDV12398.1| snRNP protein [Saccharomyces cerevisiae RM11-1a]
gi|349580792|dbj|GAA25951.1| K7_Lsm7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 107
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++
Sbjct: 15 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM 62
>gi|151944390|gb|EDN62668.1| snRNP protein [Saccharomyces cerevisiae YJM789]
Length = 107
Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++
Sbjct: 15 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM 62
>gi|158267618|ref|NP_014252.2| Lsm7p [Saccharomyces cerevisiae S288c]
gi|150421590|sp|P53905.2|LSM7_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm7
gi|259149212|emb|CAY82454.1| Lsm7p [Saccharomyces cerevisiae EC1118]
gi|285814507|tpg|DAA10401.1| TPA: Lsm7p [Saccharomyces cerevisiae S288c]
gi|392296845|gb|EIW07946.1| Lsm7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 115
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 39/48 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
++E +LDLAK+ D ++VKL GG+ V G LKGYDQL+NLVLD+ VE++
Sbjct: 23 KREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMNLVLDDTVEYM 70
>gi|32401287|gb|AAP80816.1| U6 snRNA-associated Sm-like protein LSm7 [Griffithsia japonica]
Length = 110
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 40/55 (72%)
Query: 30 SLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ K ++ +LDL+K+ DK V V+L GGRQV G LKG+D LLNLVLDE VE LR
Sbjct: 9 APKKGASQKVILDLSKYSDKDVIVRLAGGRQVRGVLKGWDPLLNLVLDEVVEQLR 63
>gi|336363390|gb|EGN91783.1| hypothetical protein SERLA73DRAFT_148178 [Serpula lacrymans var.
lacrymans S7.3]
Length = 92
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E +LDL+K+ ++ ++VK TGGR+V G LKGYDQLLNLVLDE E
Sbjct: 5 KREAILDLSKYANERIRVKFTGGREVVGILKGYDQLLNLVLDEVEE 50
>gi|308491262|ref|XP_003107822.1| CRE-LSM-7 protein [Caenorhabditis remanei]
gi|308249769|gb|EFO93721.1| CRE-LSM-7 protein [Caenorhabditis remanei]
Length = 103
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+V+DL +F+DK ++VK GGR+ +G L+G+DQLLN+VLD+ E+LR
Sbjct: 9 KKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLR 57
>gi|268536210|ref|XP_002633240.1| C. briggsae CBR-LSM-7 protein [Caenorhabditis briggsae]
Length = 103
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+V+DL +F+DK ++VK GGR+ +G L+G+DQLLN+VLD+ E+LR
Sbjct: 9 KKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLR 57
>gi|365983778|ref|XP_003668722.1| hypothetical protein NDAI_0B04440 [Naumovozyma dairenensis CBS
421]
gi|343767489|emb|CCD23479.1| hypothetical protein NDAI_0B04440 [Naumovozyma dairenensis CBS
421]
Length = 121
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+++ ++DL+K+ D V+VKL GG+ VTG LKGYDQL+NLVLDE +++L+
Sbjct: 27 KRDAIVDLSKYKDSKVRVKLMGGKIVTGILKGYDQLMNLVLDETIDYLK 75
>gi|330806057|ref|XP_003290991.1| hypothetical protein DICPUDRAFT_38323 [Dictyostelium purpureum]
gi|325078869|gb|EGC32498.1| hypothetical protein DICPUDRAFT_38323 [Dictyostelium purpureum]
Length = 98
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
+ +KE++LDL +F+ K + VK TGGR+V G LKGYDQL+N+ LD+ EF+R +
Sbjct: 7 ASKKESILDLQRFLGKEICVKFTGGREVQGILKGYDQLVNITLDQTKEFIRDPI 60
>gi|393219456|gb|EJD04943.1| U6 snRNA-associated Sm-like protein LSm7 [Fomitiporia
mediterranea MF3/22]
Length = 134
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 40/48 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
++E +LDL K++++ ++VK TGGR+VTG LKGYDQLLNLVLD+ E L
Sbjct: 46 KREAILDLQKYMNERIRVKFTGGREVTGILKGYDQLLNLVLDDVEEQL 93
>gi|17544592|ref|NP_502034.1| Protein LSM-7 [Caenorhabditis elegans]
gi|3881724|emb|CAA93428.1| Protein LSM-7 [Caenorhabditis elegans]
Length = 104
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+V+DL +F+DK ++VK GGR+ +G L+G+DQLLN+VLD+ E+LR
Sbjct: 9 KKESVVDLTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLR 57
>gi|390349986|ref|XP_798585.3| PREDICTED: LSM7 homolog, U6 small nuclear RNA associated (S.
cerevisiae)-like [Strongylocentrotus purpuratus]
Length = 104
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+VTG LKG+D LLNLVLD EF+R
Sbjct: 13 SILDLSKYIDKQIRVKFQGGREVTGVLKGFDPLLNLVLDGTTEFMR 58
>gi|403416516|emb|CCM03216.1| predicted protein [Fibroporia radiculosa]
Length = 110
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 39/46 (84%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E +LDL+K+ ++ ++VK TGGR+VTG LKG+DQLLNLVLDE E
Sbjct: 5 KREAILDLSKYANERIRVKFTGGREVTGILKGFDQLLNLVLDEVEE 50
>gi|198436837|ref|XP_002127828.1| PREDICTED: similar to LSM7 homolog, U6 small nuclear RNA
associated isoform 2 [Ciona intestinalis]
Length = 99
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE++LDL+K++D+ ++VK GGR+ +G LKG+D LLNLVLD E LR
Sbjct: 6 KKESILDLSKYLDRPIRVKFHGGREASGVLKGFDPLLNLVLDSTTETLR 54
>gi|393228545|gb|EJD36188.1| U6 snRNA-associated Sm-like protein LSm7 [Auricularia delicata
TFB-10046 SS5]
Length = 116
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 41/49 (83%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDL+K+ ++ ++VK TGGR+VTG LKGYDQLLNLVLD+ E ++
Sbjct: 29 KREAILDLSKYQNERIRVKFTGGREVTGILKGYDQLLNLVLDDVEEVIQ 77
>gi|224010870|ref|XP_002294392.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969887|gb|EED88226.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 131
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 41/51 (80%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ +KE++L+LAK VD V+VK GGR++ G L+GYD+L+NLVLD+ EF+R
Sbjct: 29 NSKKESILELAKLVDSSVRVKCLGGRELRGALRGYDELVNLVLDDCEEFMR 79
>gi|50309941|ref|XP_454984.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644119|emb|CAH00071.1| KLLA0E22881p [Kluyveromyces lactis]
Length = 110
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 18 SARVSFNLGFLKSLKMSG-RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL 76
AR S + K G ++E++++LA++ D V+VK GGR VTG LKGYD+L+NLVL
Sbjct: 3 EARQSQQPRQEQKKKFEGPKRESIINLAQYKDTEVRVKFIGGRLVTGILKGYDELMNLVL 62
Query: 77 DEAVEFLR 84
DE VE+ R
Sbjct: 63 DETVEYAR 70
>gi|156031032|ref|XP_001584841.1| hypothetical protein SS1G_14124 [Sclerotinia sclerotiorum 1980]
gi|154700515|gb|EDO00254.1| hypothetical protein SS1G_14124 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 138
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 39/57 (68%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIF 92
+KE +LDL K++DK V VK GGR V GTLKGYD L+NLVLD+ E L + N +
Sbjct: 48 KKENILDLGKYMDKQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKLTDDEGNEAW 104
>gi|340368632|ref|XP_003382855.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Amphimedon queenslandica]
Length = 108
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 42/51 (82%), Gaps = 2/51 (3%)
Query: 36 RKETVL--DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
R+ET+L +L K++DK ++VK GGR+ +G LKGYDQLLNLVLD A+E+L+
Sbjct: 11 RRETLLSAELGKYLDKRIRVKFQGGRETSGILKGYDQLLNLVLDGAIEYLQ 61
>gi|225706932|gb|ACO09312.1| U6 snRNA-associated Sm-like protein LSm7 [Osmerus mordax]
Length = 103
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++ DL+K++DK ++ K GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KDKKKKESIFDLSKYIDKPIRAKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|291228609|ref|XP_002734270.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Saccoglossus kowalevskii]
Length = 116
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+KF+DK ++VK GGR+ +G LKGYD LLNLV+D EF+R
Sbjct: 25 SILDLSKFIDKPIRVKFQGGREASGILKGYDPLLNLVIDGTTEFVR 70
>gi|50291047|ref|XP_447956.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527267|emb|CAG60907.1| unnamed protein product [Candida glabrata]
Length = 117
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 24 NLGFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
N G K + ++E ++DL K+ D V VKL GGR VTG LKGYDQL+NLVL+E E L
Sbjct: 15 NRGQQKKKFEAPKREAIVDLGKYKDSKVSVKLMGGRIVTGILKGYDQLMNLVLEETEETL 74
Query: 84 RGNLYNGIFVIVCFLL 99
+ + G V L
Sbjct: 75 KPEVETGATQQVTRQL 90
>gi|154288569|ref|XP_001545066.1| hypothetical protein BC1G_16433 [Botryotinia fuckeliana B05.10]
gi|347835616|emb|CCD50188.1| hypothetical protein [Botryotinia fuckeliana]
Length = 140
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 36/48 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+KE +LDL K++DK V VK GGR V GTLKGYD L+NLVLD+ E L
Sbjct: 50 KKENILDLGKYMDKQVTVKFNGGRHVKGTLKGYDALMNLVLDDVEEKL 97
>gi|448515624|ref|XP_003867376.1| Lsm7 protein [Candida orthopsilosis Co 90-125]
gi|380351715|emb|CCG21938.1| Lsm7 protein [Candida orthopsilosis]
Length = 124
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFV 93
++E +LDL K+ D+ ++V+ GGR+VTG LKGYDQL+NLVL++ E LR + G ++
Sbjct: 31 KREAILDLNKYKDEEIRVRFVGGRKVTGILKGYDQLMNLVLEDVQEQLRDPVIEGRYL 88
>gi|328771114|gb|EGF81154.1| hypothetical protein BATDEDRAFT_7306, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 104
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +LDL K+ +K + V+ GGRQV G LKGYD L NLVLD+A EF+R
Sbjct: 11 KKENILDLTKYSNKKIIVQFQGGRQVAGILKGYDPLSNLVLDDAEEFIR 59
>gi|318054598|ref|NP_001187750.1| LSM7 homolog, U6 small nuclear RNA associated [Ictalurus
punctatus]
gi|308323873|gb|ADO29072.1| u6 snRNA-associated sm-like protein lsm7 [Ictalurus punctatus]
Length = 103
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++ DL+K+++K ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESIFDLSKYINKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 56
>gi|148675990|gb|EDL07937.1| mCG17287 [Mus musculus]
Length = 103
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K++DK ++VK GG + +G LKG+D LLNLVLD +E++R
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGWETSGILKGFDPLLNLVLDGTMEYMR 56
>gi|328858404|gb|EGG07517.1| hypothetical protein MELLADRAFT_35470 [Melampsora larici-populina
98AG31]
Length = 108
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDL+K+V++ V VK GGRQ+TG LKGYD LLNLV+DE E L+
Sbjct: 20 KREAILDLSKYVNQRVIVKFMGGRQITGILKGYDGLLNLVMDEVEESLK 68
>gi|221219684|gb|ACM08503.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 126
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LR
Sbjct: 15 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR 60
>gi|297275718|ref|XP_001117654.2| PREDICTED: hypothetical protein LOC721486 [Macaca mulatta]
Length = 151
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 39 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 84
>gi|294901650|ref|XP_002777457.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239885093|gb|EER09273.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 125
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ S + +V+DL + + + V VKLTGGR+V+G LKG+D + NLVLDE++E+LR
Sbjct: 26 RRSSIRPSVIDLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLR 78
>gi|397643091|gb|EJK75649.1| hypothetical protein THAOC_02624 [Thalassiosira oceanica]
Length = 184
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 41/50 (82%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
+++L+LAK +D+ V+VK GGR++ G L+GYD+L+NLVLD+ EF+RG L
Sbjct: 71 DSILELAKLIDQNVRVKCLGGRELRGALRGYDELVNLVLDDCDEFIRGWL 120
>gi|294886585|ref|XP_002771771.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239875533|gb|EER03587.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 129
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ +V+DL + + + V VKLTGGR+V+G LKG+D + NLVLDE++E+LR
Sbjct: 30 RPSVIDLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLR 77
>gi|353234457|emb|CCA66482.1| related to snRNP protein [Piriformospora indica DSM 11827]
Length = 158
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 37/46 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++E +LDL+K+V V+V TGGRQVTG LKG+DQLLNLVLD+ E
Sbjct: 72 KREAILDLSKYVGSKVRVTFTGGRQVTGILKGFDQLLNLVLDQVEE 117
>gi|294941880|ref|XP_002783286.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
gi|239895701|gb|EER15082.1| U6 snRNA-associated protein, putative [Perkinsus marinus ATCC
50983]
Length = 139
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 39/48 (81%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ +V+DL + + + V VKLTGGR+V+G LKG+D + NLVLDE++E+LR
Sbjct: 45 RPSVIDLERLMHQRVTVKLTGGREVSGVLKGFDPVPNLVLDESIEYLR 92
>gi|440804414|gb|ELR25291.1| Hypothetical protein ACA1_290670, partial [Acanthamoeba
castellanii str. Neff]
Length = 96
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 38/47 (80%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+TVLDL +++ + V VK +GGR+VTG LKGYD L+NLVLDE EFLR
Sbjct: 2 KTVLDLDRYLGQRVTVKFSGGREVTGLLKGYDTLVNLVLDETKEFLR 48
>gi|402220188|gb|EJU00260.1| U6 snRNA-associated Sm-like protein LSm7 [Dacryopinax sp. DJM-731
SS1]
Length = 120
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
++E +LDLAK+ ++VK GGR+VTG LKG+DQL+NLVLD+ VE L
Sbjct: 30 PAKREAILDLAKYESMRIRVKFQGGREVTGVLKGFDQLMNLVLDDVVENL 79
>gi|224087215|ref|XP_002189612.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Taeniopygia
guttata]
Length = 115
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 23 SILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 68
>gi|149034483|gb|EDL89220.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_e [Rattus norvegicus]
Length = 141
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 49 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 94
>gi|291244885|ref|XP_002742321.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G-like
[Saccoglossus kowalevskii]
Length = 77
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGRQVTG L+GYD +NLV+DE+VE + G + I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRQVTGVLRGYDPFMNLVMDESVEEISGGEKHQIGMVV 61
>gi|326934238|ref|XP_003213199.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm7-like
[Meleagris gallopavo]
Length = 116
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 24 SILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 69
>gi|156405713|ref|XP_001640876.1| predicted protein [Nematostella vectensis]
gi|156228012|gb|EDO48813.1| predicted protein [Nematostella vectensis]
Length = 77
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V+G L+GYD +NLVLD+AVE + GN + I ++V
Sbjct: 3 KAHPPELKKYMDKKLSLKLNGGRHVSGVLRGYDPFMNLVLDDAVENVSGNEKHAIGMVV 61
>gi|358058374|dbj|GAA95893.1| hypothetical protein E5Q_02551 [Mixia osmundae IAM 14324]
Length = 197
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 41/55 (74%)
Query: 30 SLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
S+ +KE +L+L+K+ D+ ++VK GGR+VTG LKG DQL+N+VLD+ E +R
Sbjct: 96 SIPDRPKKEAILELSKYRDQRIRVKFLGGREVTGVLKGSDQLMNMVLDDVQELVR 150
>gi|126137239|ref|XP_001385143.1| hypothetical protein PICST_46810 [Scheffersomyces stipitis CBS
6054]
gi|126092365|gb|ABN67114.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 109
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 30 SLKMSG-RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
S K G +++ +LDL K+ D+ ++VK GGR VTG L+G+DQL+NLVLD+ E LR +
Sbjct: 10 STKQEGPKRDAILDLNKYKDQVIRVKFIGGRHVTGVLRGFDQLMNLVLDDVTETLRDD 67
>gi|119589795|gb|EAW69389.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
Length = 128
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 36 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 81
>gi|221221360|gb|ACM09341.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|225705016|gb|ACO08354.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
Length = 107
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LR
Sbjct: 15 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR 60
>gi|403352746|gb|EJY75890.1| U6 snRNA-associated Sm-like protein LSm7 [Oxytricha trifallax]
Length = 136
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+E+ +DLA VDK +++K GGR+VTG LKG D NLVLD+A+E++R
Sbjct: 43 RESAIDLAPLVDKKLRIKFVGGREVTGILKGADPTSNLVLDDAIEYIR 90
>gi|443895126|dbj|GAC72472.1| hypothetical protein PANT_7d00115 [Pseudozyma antarctica T-34]
Length = 117
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
KE +LDL K++D ++VK GGR+V G LKG+DQL+NLV+D+ E LR
Sbjct: 27 KEAILDLTKYIDTKIRVKFAGGREVFGVLKGFDQLMNLVMDDVHEALR 74
>gi|213514586|ref|NP_001134195.1| LSM7 homolog, U6 small nuclear RNA associated [Salmo salar]
gi|209731384|gb|ACI66561.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209732196|gb|ACI66967.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209733656|gb|ACI67697.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|209737242|gb|ACI69490.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
gi|225705702|gb|ACO08697.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
gi|290563094|gb|ADD38941.1| U6 snRNA-associated Sm-like protein LSm7 [Lepeophtheirus
salmonis]
gi|303667107|gb|ADM16255.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 111
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LR
Sbjct: 19 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR 64
>gi|221221528|gb|ACM09425.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 111
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LR
Sbjct: 19 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR 64
>gi|440912172|gb|ELR61764.1| U6 snRNA-associated Sm-like protein LSm7, partial [Bos grunniens
mutus]
Length = 113
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 21 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 66
>gi|326429750|gb|EGD75320.1| hypothetical protein PTSG_06970 [Salpingoeca sp. ATCC 50818]
Length = 107
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ +LDL K+VDK ++VK +GGR+V G L+GYD L NLVL + +EFLR
Sbjct: 11 RKHILDLEKYVDKKLRVKFSGGREVVGVLQGYDPLSNLVLSDTIEFLR 58
>gi|225711338|gb|ACO11515.1| U6 snRNA-associated Sm-like protein LSm7 [Caligus rogercresseyi]
Length = 111
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LR
Sbjct: 19 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR 64
>gi|148699535|gb|EDL31482.1| mCG12127, isoform CRA_c [Mus musculus]
Length = 139
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 47 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMR 92
>gi|367004679|ref|XP_003687072.1| hypothetical protein TPHA_0I01310 [Tetrapisispora phaffii CBS
4417]
gi|357525375|emb|CCE64638.1| hypothetical protein TPHA_0I01310 [Tetrapisispora phaffii CBS
4417]
Length = 120
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 40/50 (80%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+++ ++DL K+ D V+V+L GGR VTG LKGYD L+NLV+D A+E+++G
Sbjct: 28 KRDAIVDLGKYKDTEVRVELMGGRLVTGILKGYDSLMNLVIDNAIEYVKG 77
>gi|256075162|ref|XP_002573889.1| family S9 non-peptidase homologue (S09 family) [Schistosoma
mansoni]
Length = 664
Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+++DL K++DK ++VK +GGR+ G LKG D L N+V+D EFLR
Sbjct: 571 KKESIIDLNKYIDKRIRVKFSGGREAVGILKGCDNLQNMVIDCTTEFLR 619
>gi|401404091|ref|XP_003881646.1| putative u6 snRNA-associated Sm-like protein [Neospora caninum
Liverpool]
gi|325116059|emb|CBZ51613.1| putative u6 snRNA-associated Sm-like protein [Neospora caninum
Liverpool]
Length = 99
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
S +V+DL KF+++ V+VK +GGR++TG LKG+D + NLVLDE EFLR
Sbjct: 3 SKEARSVIDLNKFLNQRVRVKFSGGREITGVLKGHDAVSNLVLDETEEFLR 53
>gi|313223467|emb|CBY40440.1| unnamed protein product [Oikopleura dioica]
gi|313234485|emb|CBY10442.1| unnamed protein product [Oikopleura dioica]
Length = 106
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++L+L K+++K ++VK GGR+ +G LKGYDQLLNLV+D E LR
Sbjct: 17 SILELNKYLEKAIRVKFQGGREASGILKGYDQLLNLVIDSTTEHLR 62
>gi|407919352|gb|EKG12602.1| hypothetical protein MPH_10268 [Macrophomina phaseolina MS6]
Length = 81
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 6/60 (10%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------GIFVIVCFLLV 100
+DKG+ VK GGR+VTGTLKGYDQL+NLVLD+ E +R + N G+ V LLV
Sbjct: 1 MDKGISVKFNGGREVTGTLKGYDQLMNLVLDDVKEVMRDDEGNETTRSLGLIVARGTLLV 60
>gi|237839969|ref|XP_002369282.1| u6 snRNA-associated Sm-like protein, putative [Toxoplasma gondii
ME49]
gi|211966946|gb|EEB02142.1| u6 snRNA-associated Sm-like protein, putative [Toxoplasma gondii
ME49]
gi|221484662|gb|EEE22956.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221504848|gb|EEE30513.1| small nuclear ribonucleoprotein G, putative [Toxoplasma gondii
VEG]
Length = 99
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
S +V+DL KF+++ V+VK +GGR++TG LKG+D + NLVLDE EFLR
Sbjct: 3 SKEARSVIDLNKFLNQRVRVKFSGGREITGVLKGHDAVSNLVLDETEEFLR 53
>gi|429847940|gb|ELA23485.1| u6 snrna-associated protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 136
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +LDL+K++DK + VK GG +TGTLKGYD L+NLVLDE E +R
Sbjct: 47 KKENILDLSKYMDKQITVKFNGG--LTGTLKGYDALMNLVLDEVQEVMR 93
>gi|221221276|gb|ACM09299.1| U6 snRNA-associated Sm-like protein LSm7 [Salmo salar]
Length = 107
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ DL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E+LR
Sbjct: 15 SIFDLSKYLDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR 60
>gi|242018957|ref|XP_002429935.1| membrane-associated protein, putative [Pediculus humanus
corporis]
gi|212514981|gb|EEB17197.1| membrane-associated protein, putative [Pediculus humanus
corporis]
Length = 76
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGRQV G L+G+D +NLV+DE+VE + +N I ++V
Sbjct: 3 KAHPPELKKFMDKKLALKLNGGRQVNGILRGFDPFMNLVIDESVEICKNGTHNNIGMVV 61
>gi|392587441|gb|EIW76775.1| U6 snRNA-associated Sm-like protein LSm7 [Coniophora puteana
RWD-64-598 SS2]
Length = 123
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 35/39 (89%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNL 74
++E +LDL+K+V++ ++VK TGGR+VTG LKGYDQLLNL
Sbjct: 35 KREAILDLSKYVNERIRVKFTGGREVTGILKGYDQLLNL 73
>gi|354547245|emb|CCE43979.1| hypothetical protein CPAR2_502040 [Candida parapsilosis]
Length = 124
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFV 93
++E +LDL K+ ++ ++V+ GGRQVTG LKGYDQL+NLVL++ E R G ++
Sbjct: 31 KREAILDLNKYKNEEIRVRFVGGRQVTGVLKGYDQLMNLVLEDVKEQFRDPENEGKYL 88
>gi|148699533|gb|EDL31480.1| mCG12127, isoform CRA_a [Mus musculus]
Length = 106
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++DK ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 14 SILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTMEYMR 59
>gi|225705776|gb|ACO08734.1| U6 snRNA-associated Sm-like protein LSm7 [Oncorhynchus mykiss]
Length = 111
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 36/46 (78%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ DL+K++DK ++VK GGR+ +G LKG+D LLNL LD +E+LR
Sbjct: 19 SIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLALDSTIEYLR 64
>gi|304323323|gb|ADM24798.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323325|gb|ADM24799.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323327|gb|ADM24800.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323329|gb|ADM24801.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323335|gb|ADM24804.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323337|gb|ADM24805.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323341|gb|ADM24807.1| putative small nuclear ribonucleoprotein [Sporidiobolus
johnsonii]
Length = 77
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+VDK ++VK TGGR+V GTLKGYDQLLNLV+D+ E LR
Sbjct: 1 YVDKKIRVKFTGGREVVGTLKGYDQLLNLVMDDLEETLR 39
>gi|304323319|gb|ADM24796.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323321|gb|ADM24797.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323331|gb|ADM24802.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323333|gb|ADM24803.1| putative small nuclear ribonucleoprotein [Sporidiobolus
salmonicolor]
gi|304323339|gb|ADM24806.1| putative small nuclear ribonucleoprotein [Sporidiobolus
johnsonii]
Length = 77
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+VDK ++VK TGGR+V GTLKGYDQLLNLV+D+ E LR
Sbjct: 1 YVDKKIRVKFTGGREVVGTLKGYDQLLNLVMDDLEETLR 39
>gi|452822117|gb|EME29139.1| U6 snRNA-associated Sm-like protein LSm7 [Galdieria sulphuraria]
Length = 108
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
SGR +D++K++D V V+L GGRQV+G L+G+D L+NLVLDEAVE LR
Sbjct: 13 SGRS-GAIDVSKYLDVRVYVRLLGGRQVSGILRGWDPLVNLVLDEAVEQLR 62
>gi|194763519|ref|XP_001963880.1| GF21254 [Drosophila ananassae]
gi|190618805|gb|EDV34329.1| GF21254 [Drosophila ananassae]
Length = 101
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
L LKMS K +L K++DK + +KL GGR VTG L+G+D +N+VLD+ VE + N
Sbjct: 21 LPQLKMS--KAHPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNT 78
Query: 88 YNGIFVIV 95
N I ++V
Sbjct: 79 KNNIGMVV 86
>gi|448090028|ref|XP_004196966.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|448094405|ref|XP_004197997.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|359378388|emb|CCE84647.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
gi|359379419|emb|CCE83616.1| Piso0_004200 [Millerozyma farinosa CBS 7064]
Length = 127
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 29 KSLKMSG-RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+S K G ++E +LDL K+ +K ++VK GGRQ+ G LKG+DQL+NLVL E LR
Sbjct: 25 QSQKPDGPKREAILDLNKYTEKKIRVKFIGGRQIIGELKGFDQLMNLVLKNVEETLR 81
>gi|344301861|gb|EGW32166.1| hypothetical protein SPAPADRAFT_61256 [Spathaspora passalidarum
NRRL Y-27907]
Length = 129
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 29 KSLKMSG-RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ K G ++E +LDL K+ + ++VK GGRQ+TG LKG+DQL+NLVL+ E LR
Sbjct: 26 QTPKQEGPKREAILDLNKYKHQEIKVKFVGGRQITGVLKGFDQLMNLVLENVKEQLR 82
>gi|323448125|gb|EGB04028.1| hypothetical protein AURANDRAFT_33181 [Aureococcus
anophagefferens]
Length = 103
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 37/48 (77%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
++++DL K +DK V+VK GGR+V G LKG+DQL+N+VLD VE + G
Sbjct: 4 KSIIDLEKCIDKEVRVKFQGGREVRGVLKGFDQLVNIVLDNCVESMHG 51
>gi|353228992|emb|CCD75163.1| family S9 non-peptidase homologue (S09 family) [Schistosoma
mansoni]
Length = 105
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE+++DL K++DK ++VK +GGR+ G LKG D L N+V+D EFLR
Sbjct: 12 KKESIIDLNKYIDKRIRVKFSGGREAVGILKGCDNLQNMVIDCTTEFLR 60
>gi|294657422|ref|XP_459729.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
gi|199432680|emb|CAG87965.2| DEHA2E09724p [Debaryomyces hansenii CBS767]
Length = 122
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 30 SLKMSG-RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
S K G ++E +LDL + DK ++VK GGRQV G LKG+DQL+NLVL++ E +R
Sbjct: 21 SSKPDGPKREAILDLNNYKDKQIRVKFIGGRQVIGVLKGFDQLMNLVLEDVKENIR 76
>gi|332376801|gb|AEE63540.1| unknown [Dendroctonus ponderosae]
Length = 76
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGRQVTG L+G+D +NLV+DE++E R N I ++V
Sbjct: 3 KAHPPELKKFMDKKLCLKLNGGRQVTGILRGFDPFMNLVVDESIEECRDGTKNNIGMVV 61
>gi|209879165|ref|XP_002141023.1| U6 snRNA-associated Sm-like protein LSm7 [Cryptosporidium muris
RN66]
gi|209556629|gb|EEA06674.1| U6 snRNA-associated Sm-like protein LSm7, putative
[Cryptosporidium muris RN66]
Length = 95
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 38/46 (82%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+++LDL+KF++K ++VK+ GGR VTG L+GYD + N+VLD+ EFL
Sbjct: 4 KSILDLSKFINKEIRVKICGGRDVTGILRGYDGVTNIVLDDTKEFL 49
>gi|444732354|gb|ELW72654.1| U6 snRNA-associated Sm-like protein LSm7 [Tupaia chinensis]
Length = 107
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 40/49 (81%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE++LDL+K++DK + +K GGR+ +GTLKG+D L NL+L+ ++++R
Sbjct: 7 KKESILDLSKYMDKTICMKFQGGREASGTLKGFDPLPNLLLNGTIKYMR 55
>gi|57530588|ref|NP_001006337.1| U6 snRNA-associated Sm-like protein LSm7 [Gallus gallus]
gi|53130424|emb|CAG31541.1| hypothetical protein RCJMB04_7l22 [Gallus gallus]
Length = 116
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 37/46 (80%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++LDL+K++ K ++VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 24 SILDLSKYIGKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMR 69
>gi|238882730|gb|EEQ46368.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 123
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDL K+ D+ ++VK GGR+V G LKG+DQL+NLVL+ E LR
Sbjct: 29 KREAILDLNKYKDQKIRVKFIGGREVVGILKGFDQLMNLVLENVTETLR 77
>gi|241955785|ref|XP_002420613.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
gi|223643955|emb|CAX41695.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
Length = 122
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFV 93
++E +LDL K+ D+ ++VK GGR++ G LKG+DQL+NLVL+ E LR + I
Sbjct: 28 KREAILDLNKYKDQKIRVKFIGGREIVGILKGFDQLMNLVLENVTETLRDPEDDEILT 85
>gi|219111023|ref|XP_002177263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411798|gb|EEC51726.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 93
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 40 VLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+L+L+K VD V+VK GGR++ G L+GYD L+NLVLDE+ EFLR +
Sbjct: 1 MLELSKLVDCTVRVKCIGGREIKGILRGYDDLVNLVLDESEEFLRDH 47
>gi|344238612|gb|EGV94715.1| U6 snRNA-associated Sm-like protein LSm7 [Cricetulus griseus]
Length = 130
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +KE++LDL+K +D+ ++VK GG + +G LKG+ LLNLVLD +E++R
Sbjct: 5 KEKKKKESILDLSKRIDETIRVKFQGGWEASGILKGFAPLLNLVLDGTIEYVR 57
>gi|320166272|gb|EFW43171.1| small nuclear riboprotein [Capsaspora owczarzaki ATCC 30864]
Length = 110
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQ--VTGTLKGYDQLLNLVLDEAVEFLR 84
E++++LAK +DK V+VK GGR+ + G LKGYD LLNLVLDE EFLR
Sbjct: 13 ESIVNLAKLLDKTVRVKFRGGREGKLIGLLKGYDPLLNLVLDETQEFLR 61
>gi|221220698|gb|ACM09010.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|221221936|gb|ACM09629.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGRQV G L+G+D +NLV+D+ +E G + N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRQVQGVLRGFDPFMNLVMDDCLEMAPGGIQNTIGMVV 61
>gi|118101457|ref|XP_001233287.1| PREDICTED: uncharacterized protein LOC771344 isoform 1 [Gallus
gallus]
gi|126303310|ref|XP_001372569.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
gi|395507378|ref|XP_003758002.1| PREDICTED: small nuclear ribonucleoprotein G [Sarcophilus
harrisii]
gi|387018738|gb|AFJ51487.1| Sm protein G [Crotalus adamanteus]
Length = 76
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGMVV 61
>gi|388492630|gb|AFK34381.1| unknown [Lotus japonicus]
Length = 80
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL K++DK +Q+KL R + GTL+GYDQ +N+V+D VE + GN N I ++V
Sbjct: 9 DLKKYMDKNLQIKLNANRMIVGTLRGYDQFMNMVVDNTVE-VNGNEKNDIGMVV 61
>gi|213513524|ref|NP_001134580.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|209734434|gb|ACI68086.1| Small nuclear ribonucleoprotein G [Salmo salar]
gi|303659717|gb|ADM15968.1| Small nuclear ribonucleoprotein G [Salmo salar]
Length = 76
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGRQV G L+G+D +NLV+D+ +E G + N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRQVQGVLRGFDPFMNLVMDDCLEMAPGGIQNTIGLVV 61
>gi|86196664|gb|EAQ71302.1| hypothetical protein MGCH7_ch7g709 [Magnaporthe oryzae 70-15]
Length = 82
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------GIFVIVCFLLV 100
+DK VQVK GGR+V GTLKGYD L+NLVLDE E +R N G+ V+ LLV
Sbjct: 1 MDKEVQVKFNGGREVIGTLKGYDALMNLVLDEVKETMRDEEGNESSRPLGLVVVRGTLLV 60
Query: 101 CF 102
Sbjct: 61 AI 62
>gi|356538387|ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|255630063|gb|ACU15385.1| unknown [Glycine max]
Length = 79
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL G R + GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNGNRMIVGTLRGFDQFMNLVVDNTVE-VNGNEKNDIGMVV 61
>gi|197127872|gb|ACH44370.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
Length = 76
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAAGGQQNNIGMVV 61
>gi|268565649|ref|XP_002639509.1| C. briggsae CBR-SNR-7 protein [Caenorhabditis briggsae]
Length = 77
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-GNLYN-GIFVI 94
K +L K++DK +++KL G R V+G L+G+D +N+V+DEAVE+ + GN N G+ VI
Sbjct: 3 KTHPPELKKYMDKEIELKLNGNRHVSGILRGFDPFMNMVIDEAVEYPKNGNSINLGMTVI 62
>gi|398407359|ref|XP_003855145.1| hypothetical protein MYCGRDRAFT_55886 [Zymoseptoria tritici IPO323]
gi|339475029|gb|EGP90121.1| hypothetical protein MYCGRDRAFT_55886 [Zymoseptoria tritici IPO323]
Length = 83
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN------GIFVIVCFLLV 100
+DK + VK GGR+VTGTLKGYDQL+NLVLD E R N G+ V+ LLV
Sbjct: 1 MDKDINVKFNGGREVTGTLKGYDQLMNLVLDNVKEMTRDEEGNTSSRSLGLLVVRGTLLV 60
>gi|118397933|ref|XP_001031297.1| Sm protein [Tetrahymena thermophila]
gi|89285623|gb|EAR83634.1| Sm protein [Tetrahymena thermophila SB210]
Length = 103
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 4/56 (7%)
Query: 33 MSG----RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
MSG +KE++++L+++V K ++VK GGR+VTG LK +D LN++LD+ VE +R
Sbjct: 1 MSGGQKQQKESIINLSQYVGKDIRVKFQGGREVTGVLKSFDNQLNMILDDCVETIR 56
>gi|66363098|ref|XP_628515.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|46229816|gb|EAK90634.1| hypothetical protein cgd7_3520 [Cryptosporidium parvum Iowa II]
Length = 73
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Query: 30 SLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
+++MS + ++L L KF +K ++VKL GGR+V G L+G+D + NLVLDE VE++ G L
Sbjct: 13 NIEMSSK--SILGLNKFNNKEIKVKLCGGREVIGILRGFDAVTNLVLDETVEYMFGRL 68
>gi|357619057|gb|EHJ71789.1| small nuclear ribonucleoprotein G [Danaus plexippus]
Length = 76
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GR VTG L+G+D +NLVLDE+VE + N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMVV 61
>gi|293355277|ref|XP_001074288.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Rattus
norvegicus]
gi|392334395|ref|XP_003753162.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like [Rattus
norvegicus]
Length = 108
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
E++LDL K++DK ++VK GG + +G KG+D LLNLVLD +E+ R
Sbjct: 15 ESILDLPKYIDKTIRVKFQGGWEASGISKGFDSLLNLVLDGTIEYRR 61
>gi|91093719|ref|XP_967705.1| PREDICTED: similar to small nuclear ribonucleoprotein G
[Tribolium castaneum]
gi|270012988|gb|EFA09436.1| hypothetical protein TcasGA2_TC010648 [Tribolium castaneum]
Length = 76
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGRQV G L+G+D +NLV+DE+VE R N I ++V
Sbjct: 3 KAHPPELKKFMDKKLCLKLNGGRQVVGILRGFDPFMNLVVDESVEECRDGKKNNIGMVV 61
>gi|384497931|gb|EIE88422.1| hypothetical protein RO3G_13133 [Rhizopus delemar RA 99-880]
Length = 76
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K + +L K++DK + ++L G R+VTG L+GYD +N+VLDE VE + N I ++V
Sbjct: 3 KTSTPELKKYMDKRISLQLNGNRKVTGVLRGYDPFMNIVLDETVEEVSPTERNNIGMVV 61
>gi|291001357|ref|XP_002683245.1| predicted protein [Naegleria gruberi]
gi|284096874|gb|EFC50501.1| predicted protein [Naegleria gruberi]
Length = 103
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+E +LDL +++ K V VK GGR+V GTL+G+D ++NLVL++ EF+R
Sbjct: 4 RENILDLNQYISKQVLVKFIGGREVYGTLRGFDNMINLVLEDCYEFIR 51
>gi|225711834|gb|ACO11763.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|225714162|gb|ACO12927.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
gi|290562395|gb|ADD38594.1| Small nuclear ribonucleoprotein G [Lepeophtheirus salmonis]
Length = 79
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIF 92
MS K +L KF+DK VQ+KL R + G L+GYD +NLVL+E +E + N +
Sbjct: 1 MSSTKAHPPELKKFMDKRVQLKLNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRNPVG 60
Query: 93 VIV 95
IV
Sbjct: 61 TIV 63
>gi|443719153|gb|ELU09428.1| hypothetical protein CAPTEDRAFT_156804 [Capitella teleta]
Length = 76
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR VTGTL+G+D +NLV+DEA+E + N I ++V
Sbjct: 3 KAHPPELKKYMDKRLTLKLNGGRVVTGTLRGFDPFMNLVVDEAIEQCKTGEQNSIGMVV 61
>gi|344232902|gb|EGV64775.1| U6 snRNA-associated Sm-like protein LSm7 [Candida tenuis ATCC
10573]
Length = 129
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 36/49 (73%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++E +LDL K+ D ++V+ GGRQ+ G LKG+DQL+NLVL+ E LR
Sbjct: 33 KREAILDLNKYKDTQIKVEFIGGRQIVGVLKGFDQLMNLVLESVEETLR 81
>gi|432112555|gb|ELK35271.1| Small nuclear ribonucleoprotein G [Myotis davidii]
Length = 76
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE G N I ++
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATGGQQNNIGMVA 61
>gi|195134290|ref|XP_002011570.1| GI11102 [Drosophila mojavensis]
gi|195399181|ref|XP_002058199.1| GJ15956 [Drosophila virilis]
gi|193906693|gb|EDW05560.1| GI11102 [Drosophila mojavensis]
gi|194150623|gb|EDW66307.1| GJ15956 [Drosophila virilis]
Length = 76
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR VTG L+G+D +N+VLD+ VE + N N I ++V
Sbjct: 3 KAHPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNSIGMVV 61
>gi|313217530|emb|CBY38609.1| unnamed protein product [Oikopleura dioica]
gi|313236587|emb|CBY19879.1| unnamed protein product [Oikopleura dioica]
Length = 76
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K +L KF+D+ + VK+ GGR+V G L+G+D +NLV+D+A+E+ + N
Sbjct: 3 KAHPPELKKFMDRKMSVKVNGGRKVEGVLRGFDPFMNLVIDDAIEYRKDN 52
>gi|403418112|emb|CCM04812.1| predicted protein [Fibroporia radiculosa]
Length = 355
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L KF+DK + V L GGR+V+GTL+GYD LNLVLD+A E
Sbjct: 8 ELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVLDDATE 47
>gi|356505386|ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine
max]
gi|356572580|ref|XP_003554446.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Glycine max]
gi|255625815|gb|ACU13252.1| unknown [Glycine max]
Length = 79
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE-VNGNEKNDIGMVV 61
>gi|194891288|ref|XP_001977464.1| GG18240 [Drosophila erecta]
gi|195479283|ref|XP_002100833.1| GE15956 [Drosophila yakuba]
gi|190649113|gb|EDV46391.1| GG18240 [Drosophila erecta]
gi|194188357|gb|EDX01941.1| GE15956 [Drosophila yakuba]
Length = 76
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR VTG L+G+D +N+VLD+ VE + N N I ++V
Sbjct: 3 KAHPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVV 61
>gi|319401867|ref|NP_001187842.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
gi|308324118|gb|ADO29194.1| small nuclear ribonucleoprotein g [Ictalurus punctatus]
Length = 76
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+D+++E G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSIEISAGGQQNSIGMVV 61
>gi|308505206|ref|XP_003114786.1| CRE-SNR-7 protein [Caenorhabditis remanei]
gi|308258968|gb|EFP02921.1| CRE-SNR-7 protein [Caenorhabditis remanei]
Length = 77
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +L K++DK + +KL G RQV+G L+G+D +N+V+DEAVE+ +
Sbjct: 3 KTHPPELKKYMDKEMDLKLNGNRQVSGILRGFDPFMNMVIDEAVEYPK 50
>gi|195042091|ref|XP_001991363.1| GH12097 [Drosophila grimshawi]
gi|193901121|gb|EDV99987.1| GH12097 [Drosophila grimshawi]
Length = 76
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR VTG L+G+D +N+VLD+ +E + N N I ++V
Sbjct: 3 KAHPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEECKDNTKNSIGMVV 61
>gi|291386619|ref|XP_002709854.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMANSGQQNNIGMVV 61
>gi|308321244|gb|ADO27774.1| small nuclear ribonucleoprotein g [Ictalurus furcatus]
Length = 76
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+D+++E G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSIEISAGGQQNPIGMVV 61
>gi|225710716|gb|ACO11204.1| Small nuclear ribonucleoprotein G [Caligus rogercresseyi]
Length = 79
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIF 92
MS K +L KF+DK VQ+KL R + G L+GYD +NLVL+E +E + N +
Sbjct: 1 MSSTKAHPPELKKFMDKRVQLKLNASRNMEGILRGYDPFMNLVLEEGIETTKQGHRNPVG 60
Query: 93 VIV 95
+V
Sbjct: 61 TVV 63
>gi|354481504|ref|XP_003502941.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344250923|gb|EGW07027.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHSPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNISMVV 61
>gi|357511115|ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
gi|87240819|gb|ABD32677.1| Like-Sm ribonucleoprotein-related, core [Medicago truncatula]
gi|355500861|gb|AES82064.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
Length = 80
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 3 RSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVE-VNGNEKNDIGMVV 61
>gi|114050793|ref|NP_001040405.1| small nuclear ribonucleoprotein G [Bombyx mori]
gi|95102770|gb|ABF51326.1| small nuclear ribonucleoprotein G [Bombyx mori]
Length = 76
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK +KL GR VTG L+G+D +NLVLDE+VE + N + ++V
Sbjct: 3 KAHPPELKKFMDKKWSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNVGMVV 61
>gi|15224075|ref|NP_179971.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|297821653|ref|XP_002878709.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|6094211|sp|O82221.1|RUXG_ARATH RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|3738322|gb|AAC63663.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|21593829|gb|AAM65796.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|25083131|gb|AAN72046.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana]
gi|30102776|gb|AAP21306.1| At2g23930 [Arabidopsis thaliana]
gi|297324548|gb|EFH54968.1| hypothetical protein ARALYDRAFT_900880 [Arabidopsis lyrata subsp.
lyrata]
gi|330252409|gb|AEC07503.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 80
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R VTGTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE-VNGNDKTDIGMVV 61
>gi|242050850|ref|XP_002463169.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
gi|241926546|gb|EER99690.1| hypothetical protein SORBIDRAFT_02g039000 [Sorghum bicolor]
Length = 80
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVE-VNGNEKNDIGMVV 61
>gi|268834043|ref|NP_001161373.1| small nuclear ribonucleoprotein polypeptide G isoform 1 [Danio
rerio]
gi|268834149|ref|NP_001004660.2| small nuclear ribonucleoprotein polypeptide G isoform 2 [Danio
rerio]
Length = 76
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+D+ +E G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQMNTIGMVV 61
>gi|388493710|gb|AFK34921.1| unknown [Medicago truncatula]
Length = 81
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 3 RSGQPPDLEKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVE-VNGNEKNDIGMVV 61
>gi|4507133|ref|NP_003087.1| small nuclear ribonucleoprotein G [Homo sapiens]
gi|13385994|ref|NP_080782.1| small nuclear ribonucleoprotein G [Mus musculus]
gi|94966887|ref|NP_001035633.1| small nuclear ribonucleoprotein G [Bos taurus]
gi|205360903|ref|NP_001128557.1| small nuclear ribonucleoprotein polypeptide G [Rattus norvegicus]
gi|301172846|ref|NP_001180369.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|356640205|ref|NP_001239260.1| small nuclear ribonucleoprotein G [Canis lupus familiaris]
gi|109461740|ref|XP_001079708.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|296223614|ref|XP_002757696.1| PREDICTED: small nuclear ribonucleoprotein G-like [Callithrix
jacchus]
gi|297667399|ref|XP_002811973.1| PREDICTED: small nuclear ribonucleoprotein G isoform 2 [Pongo
abelii]
gi|301758206|ref|XP_002914946.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ailuropoda
melanoleuca]
gi|311252444|ref|XP_003125100.1| PREDICTED: small nuclear ribonucleoprotein G-like [Sus scrofa]
gi|332226773|ref|XP_003262565.1| PREDICTED: small nuclear ribonucleoprotein G isoform 1 [Nomascus
leucogenys]
gi|338714212|ref|XP_003363026.1| PREDICTED: small nuclear ribonucleoprotein G-like [Equus
caballus]
gi|344283913|ref|XP_003413715.1| PREDICTED: small nuclear ribonucleoprotein G-like [Loxodonta
africana]
gi|348566567|ref|XP_003469073.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cavia
porcellus]
gi|354491761|ref|XP_003508023.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|392344154|ref|XP_003748887.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|402891180|ref|XP_003908832.1| PREDICTED: small nuclear ribonucleoprotein G [Papio anubis]
gi|403260478|ref|XP_003922698.1| PREDICTED: small nuclear ribonucleoprotein G [Saimiri boliviensis
boliviensis]
gi|410955001|ref|XP_003984147.1| PREDICTED: small nuclear ribonucleoprotein G [Felis catus]
gi|426223378|ref|XP_004005852.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
gi|59800216|sp|P62308.1|RUXG_HUMAN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|59800217|sp|P62309.1|RUXG_MOUSE RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|109894862|sp|Q3ZBL0.1|RUXG_BOVIN RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|225734046|pdb|3CW1|G Chain G, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734055|pdb|3CW1|3 Chain 3, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734064|pdb|3CW1|4 Chain 4, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734073|pdb|3CW1|5 Chain 5, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|315583606|pdb|3PGW|G Chain G, Crystal Structure Of Human U1 Snrnp
gi|315583615|pdb|3PGW|J Chain J, Crystal Structure Of Human U1 Snrnp
gi|332639439|pdb|2Y9A|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639446|pdb|2Y9A|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639453|pdb|2Y9A|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639463|pdb|2Y9B|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639470|pdb|2Y9B|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639477|pdb|2Y9B|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639487|pdb|2Y9C|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639494|pdb|2Y9C|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639501|pdb|2Y9C|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639511|pdb|2Y9D|G Chain G, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639518|pdb|2Y9D|N Chain N, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|332639525|pdb|2Y9D|U Chain U, Structure Of The Spliceosomal U4 Snrnp Core Domain
gi|343781214|pdb|3S6N|G Chain G, Crystal Structure Of The Gemin2-Binding Domain Of Smn,
Gemin2 In Complex With Smd1D2FEG FROM HUMAN
gi|444302204|pdb|4F7U|G Chain G, Macromolecular Machine 6
gi|444302205|pdb|4F7U|J Chain J, Macromolecular Machine 6
gi|453055429|pdb|1VU2|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055437|pdb|1VU2|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055445|pdb|1VU2|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055453|pdb|1VU2|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055461|pdb|1VU2|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055469|pdb|1VU2|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453055473|pdb|1VU2|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|453055485|pdb|1VU3|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453055493|pdb|1VU3|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453055501|pdb|1VU3|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453055509|pdb|1VU3|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453055517|pdb|1VU3|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453055525|pdb|1VU3|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056017|pdb|4F77|P Chain P, The 8s Snrnp Assembly Intermediate
gi|453056025|pdb|4F77|H Chain H, The 8s Snrnp Assembly Intermediate
gi|453056033|pdb|4F77|X Chain X, The 8s Snrnp Assembly Intermediate
gi|453056041|pdb|4F77|FF Chain f, The 8s Snrnp Assembly Intermediate
gi|453056049|pdb|4F77|NN Chain n, The 8s Snrnp Assembly Intermediate
gi|453056057|pdb|4F77|VV Chain v, The 8s Snrnp Assembly Intermediate
gi|453056061|pdb|4F77|4 Chain 4, The 8s Snrnp Assembly Intermediate
gi|806566|emb|CAA59689.1| Sm protein G [Homo sapiens]
gi|12652645|gb|AAH00070.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|12849786|dbj|BAB28480.1| unnamed protein product [Mus musculus]
gi|12850471|dbj|BAB28732.1| unnamed protein product [Mus musculus]
gi|18490257|gb|AAH22432.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|20380602|gb|AAH27499.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|30185984|gb|AAH51470.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|42542824|gb|AAH66302.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|47682759|gb|AAH70166.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|48145953|emb|CAG33199.1| SNRPG [Homo sapiens]
gi|62420278|gb|AAX81996.1| unknown [Homo sapiens]
gi|62948132|gb|AAH94411.1| Small nuclear ribonucleoprotein polypeptide G [Mus musculus]
gi|73586825|gb|AAI03237.1| Small nuclear ribonucleoprotein polypeptide G [Bos taurus]
gi|76779243|gb|AAI06056.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|119620223|gb|EAW99817.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a
[Homo sapiens]
gi|119620224|gb|EAW99818.1| small nuclear ribonucleoprotein polypeptide G, isoform CRA_a
[Homo sapiens]
gi|127799349|gb|AAH71880.1| Small nuclear ribonucleoprotein polypeptide G [Homo sapiens]
gi|148666745|gb|EDK99161.1| mCG130514, isoform CRA_a [Mus musculus]
gi|149036610|gb|EDL91228.1| rCG56468, isoform CRA_b [Rattus norvegicus]
gi|197246583|gb|AAI68750.1| Snrpg protein [Rattus norvegicus]
gi|208967440|dbj|BAG73734.1| small nuclear ribonucleoprotein polypeptide G [synthetic
construct]
gi|296477039|tpg|DAA19154.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
gi|296482417|tpg|DAA24532.1| TPA: small nuclear ribonucleoprotein G [Bos taurus]
gi|312153260|gb|ADQ33142.1| small nuclear ribonucleoprotein polypeptide G [synthetic
construct]
gi|380808500|gb|AFE76125.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|384944568|gb|AFI35889.1| small nuclear ribonucleoprotein G [Macaca mulatta]
gi|410265648|gb|JAA20790.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|410348384|gb|JAA40796.1| small nuclear ribonucleoprotein polypeptide G [Pan troglodytes]
gi|431912604|gb|ELK14622.1| Small nuclear ribonucleoprotein G [Pteropus alecto]
Length = 76
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|291398958|ref|XP_002715163.1| PREDICTED: small nuclear ribonucleoprotein polypeptide G
[Oryctolagus cuniculus]
Length = 76
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFINLVIDECVEMANSGQQNNIGMVV 61
>gi|428672291|gb|EKX73205.1| small nuclear ribonucleoprotein G, putative [Babesia equi]
Length = 104
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++V++L K ++K V VK +GGR+V GTLKG+D + NLVLD+ EFL+
Sbjct: 12 KSVINLNKHLNKQVYVKFSGGREVQGTLKGHDAMSNLVLDDTKEFLK 58
>gi|284413738|ref|NP_001165121.1| small nuclear ribonucleoprotein polypeptide G [Xenopus laevis]
gi|114107958|gb|AAI23340.1| MGC154809 protein [Xenopus laevis]
Length = 76
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +K+ GGRQV G L+G+D +NLVLDE+ E N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKINGGRQVQGILRGFDPFMNLVLDESTEISGSGNQNSIGMVV 61
>gi|440900234|gb|ELR51419.1| Small nuclear ribonucleoprotein G [Bos grunniens mutus]
Length = 76
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K L KF+DK V +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPKLKKFMDKKVSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|34394185|dbj|BAC84637.1| putative small nuclear ribonucleoprotein E [Oryza sativa Japonica
Group]
gi|215769180|dbj|BAH01409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218199999|gb|EEC82426.1| hypothetical protein OsI_26821 [Oryza sativa Indica Group]
gi|222637431|gb|EEE67563.1| hypothetical protein OsJ_25073 [Oryza sativa Japonica Group]
Length = 80
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE-VNGNEKNDIGMVV 61
>gi|403222744|dbj|BAM40875.1| U6 snRNA-associated sm-like protein [Theileria orientalis strain
Shintoku]
Length = 89
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++V++L K ++K V VK +GGR+V G LKG+D + NLVLD+ VE LR
Sbjct: 12 KSVINLNKHLNKEVYVKFSGGREVKGVLKGHDAMSNLVLDDTVELLR 58
>gi|388514393|gb|AFK45258.1| unknown [Medicago truncatula]
Length = 81
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 3 RSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVE-VNGNEKNDIGMVV 61
>gi|109077009|ref|XP_001097013.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 75
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHSPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|51858986|gb|AAH81512.1| Zgc:103688 [Danio rerio]
gi|182890240|gb|AAI65520.1| Zgc:103688 protein [Danio rerio]
Length = 76
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+L KF+DK + +KL GGR V G L+G+D +NLV+D+ +E G N I ++V
Sbjct: 8 ELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDTIEMAPGGQMNTIGMVV 61
>gi|357122008|ref|XP_003562708.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Brachypodium distachyon]
Length = 80
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE-VNGNDRNDIGMVV 61
>gi|390331570|ref|XP_788177.3| PREDICTED: small nuclear ribonucleoprotein G-like
[Strongylocentrotus purpuratus]
Length = 77
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
K +L KF+DK + +KL G R+VTG L+G+D +NLV+DEA E + N I ++V
Sbjct: 3 KAHPPELKKFMDKRLSLKLNGNRRVTGVLRGFDPFMNLVIDEATEDISTTQKNDIGMVVV 62
>gi|18860007|ref|NP_573139.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|221372123|ref|NP_001138209.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|195351500|ref|XP_002042272.1| GM13382 [Drosophila sechellia]
gi|195567140|ref|XP_002107128.1| GD15738 [Drosophila simulans]
gi|29428065|sp|Q9VXE0.1|RUXG_DROME RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|7293253|gb|AAF48634.1| small ribonucleoprotein particle protein SmG, isoform A
[Drosophila melanogaster]
gi|17944563|gb|AAL48169.1| RH35475p [Drosophila melanogaster]
gi|194124115|gb|EDW46158.1| GM13382 [Drosophila sechellia]
gi|194204529|gb|EDX18105.1| GD15738 [Drosophila simulans]
gi|220901796|gb|ACL82939.1| small ribonucleoprotein particle protein SmG, isoform B
[Drosophila melanogaster]
gi|220952224|gb|ACL88655.1| SmG-PA [synthetic construct]
Length = 76
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K ++ K++DK + +KL GGR VTG L+G+D +N+VLD+ VE + N N I ++V
Sbjct: 3 KAHPPEVKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTVEECKDNTKNNIGMVV 61
>gi|383420999|gb|AFH33713.1| small nuclear ribonucleoprotein G [Macaca mulatta]
Length = 76
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHSPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|355750359|gb|EHH54697.1| hypothetical protein EGM_15585 [Macaca fascicularis]
Length = 76
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSSKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|85001411|ref|XP_955424.1| u6 snrna-associated sm-like protein [Theileria annulata strain
Ankara]
gi|65303570|emb|CAI75948.1| u6 snrna-associated sm-like protein, putative [Theileria
annulata]
Length = 87
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 37/47 (78%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++V++L K ++K V VK +GGR+V G L+G+D + NLVLD+ VEFL+
Sbjct: 12 KSVINLNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEFLK 58
>gi|302694279|ref|XP_003036818.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune
H4-8]
gi|300110515|gb|EFJ01916.1| hypothetical protein SCHCODRAFT_47419 [Schizophyllum commune
H4-8]
Length = 77
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K + +L KF+DK + V L GGR+V+GTL+GYD LNLV+DEA+E + I +V
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDEALEETTPGQKHPIGTVV 61
>gi|210076097|ref|XP_002143124.1| YALI0F30426p [Yarrowia lipolytica]
gi|199424991|emb|CAR65212.1| YALI0F30426p [Yarrowia lipolytica CLIB122]
Length = 165
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
++E +LDL++F +K V VK+TG R++ GTLKG+DQL+NL+LD+ E +
Sbjct: 64 KREPILDLSRFENKRVVVKVTG-RKIEGTLKGWDQLMNLILDDVKETI 110
>gi|156541626|ref|XP_001601035.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Nasonia vitripennis]
Length = 76
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +N+V+DE++E + N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDGTKNNIGMVV 61
>gi|339245769|ref|XP_003374518.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
gi|316972305|gb|EFV55988.1| putative small nuclear ribonucleoprotein G [Trichinella spiralis]
Length = 76
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +L K++DK +Q++L G R+++G L+G+D +N+V+DEAVE L+
Sbjct: 3 KAHPPELKKYMDKKMQLRLNGDRKISGVLRGFDPFMNMVIDEAVEHLK 50
>gi|284413736|ref|NP_001165120.1| small nuclear ribonucleoprotein polypeptide G [Xenopus (Silurana)
tropicalis]
gi|138519693|gb|AAI35835.1| LOC100125174 protein [Xenopus (Silurana) tropicalis]
Length = 76
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE E G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECTEISGGGHQNTIGMVV 61
>gi|410053341|ref|XP_003953440.1| PREDICTED: LOW QUALITY PROTEIN: small nuclear ribonucleoprotein
G-like protein-like [Pan troglodytes]
Length = 74
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVI 94
K L+L KF+DK +KL GGR V G L+G+D +NLV+DE VE N I ++
Sbjct: 3 KAHPLELKKFMDKKFSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 60
>gi|398397857|ref|XP_003852386.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
gi|339472267|gb|EGP87362.1| hypothetical protein MYCGRDRAFT_104681 [Zymoseptoria tritici
IPO323]
Length = 93
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATE 46
>gi|148666746|gb|EDK99162.1| mCG130514, isoform CRA_b [Mus musculus]
Length = 99
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 27 FLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
F SL + ++ V +F+DK + +KL GGR V G L+G+D +NLV+DE VE
Sbjct: 16 FQTSLGLKKKRHCVSKSLRFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSG 75
Query: 87 LYNGIFVIV 95
N I ++V
Sbjct: 76 QQNNIGMVV 84
>gi|399216804|emb|CCF73491.1| unnamed protein product [Babesia microti strain RI]
Length = 102
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+TV++L K+++K ++VK GGR+V G LKG+D + NLVLDEA EF
Sbjct: 12 KTVINLNKYLNKYIRVKFNGGREVRGLLKGFDVMSNLVLDEAEEF 56
>gi|389746943|gb|EIM88122.1| like-Sm ribonucleo protein [Stereum hirsutum FP-91666 SS1]
Length = 77
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIE 47
>gi|169860675|ref|XP_001836972.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea
okayama7#130]
gi|116501694|gb|EAU84589.1| hypothetical protein CC1G_00108 [Coprinopsis cinerea
okayama7#130]
Length = 78
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K + +L KF+DK + + L GGR+V+GTL+GYD LNLV+D+AVE + I +V
Sbjct: 3 KASQPELKKFMDKKLFIHLQGGRKVSGTLRGYDLFLNLVIDDAVEETTPGQKHPIGTVV 61
>gi|170106101|ref|XP_001884262.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640608|gb|EDR04872.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 78
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIE 47
>gi|323448261|gb|EGB04162.1| hypothetical protein AURANDRAFT_32975 [Aureococcus
anophagefferens]
Length = 77
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL K++DK + +K+ G R+V+G L+GYDQ LNLVL++A E
Sbjct: 8 DLKKYMDKALTIKMNGNRRVSGVLRGYDQFLNLVLEDATE 47
>gi|229367628|gb|ACQ58794.1| Small nuclear ribonucleoprotein G [Anoplopoma fimbria]
Length = 76
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+D+++E G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDSLEMGPGGQQNTIGMVV 61
>gi|341882586|gb|EGT38521.1| hypothetical protein CAEBREN_25112 [Caenorhabditis brenneri]
gi|341895108|gb|EGT51043.1| hypothetical protein CAEBREN_10134 [Caenorhabditis brenneri]
Length = 77
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
K +L K++DK + +KL G R V+G L+G+D +N+V+DEAVE+ +
Sbjct: 3 KTHPPELKKYMDKEMDLKLNGNRHVSGILRGFDPFMNMVIDEAVEYTK 50
>gi|449299266|gb|EMC95280.1| hypothetical protein BAUCODRAFT_577920 [Baudoinia compniacensis
UAMH 10762]
Length = 83
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E N
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNN 51
>gi|282848218|gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
[Jatropha curcas]
Length = 80
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + G+ N I ++V
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE-VNGDEKNDIGMVV 61
>gi|147806402|emb|CAN67622.1| hypothetical protein VITISV_014712 [Vitis vinifera]
Length = 148
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVI 94
R DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN I ++
Sbjct: 2 SRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE-VNGNEKTDIGMV 60
Query: 95 V 95
V
Sbjct: 61 V 61
>gi|157119614|ref|XP_001659450.1| Sm protein G, putative [Aedes aegypti]
gi|108875262|gb|EAT39487.1| AAEL008719-PA [Aedes aegypti]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V+G L+G+D +N+VLDE++E + + N I ++V
Sbjct: 3 KAHPPELKKYMDKRLSLKLNGGRVVSGILRGFDPFMNVVLDESIEECKDSTRNNIGMVV 61
>gi|62083383|gb|AAX62416.1| small nuclear ribonucleoprotein G [Lysiphlebus testaceipes]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V G L+G+D +N+V+DE+VE + N I ++V
Sbjct: 3 KAHPPELKKYMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDGSQNNIGMVV 61
>gi|169598900|ref|XP_001792873.1| hypothetical protein SNOG_02259 [Phaeosphaeria nodorum SN15]
gi|160704495|gb|EAT90471.2| hypothetical protein SNOG_02259 [Phaeosphaeria nodorum SN15]
Length = 163
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 35/96 (36%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQ-------------------------------VTGT 64
+KE +LDL+K++DK + VK +GGR+ V GT
Sbjct: 42 KKENILDLSKYMDKQLTVKFSGGREERKTNGVMVAMFALGNRKILWKERHPLTHPPVIGT 101
Query: 65 LKGYDQLLNLVLDEAVEFL---RGNL-YNGIFVIVC 96
LKGYDQL+NLVLDE E L GN+ Y + +IV
Sbjct: 102 LKGYDQLMNLVLDEVKEALTDDEGNIRYRKLGLIVA 137
>gi|452979544|gb|EME79306.1| hypothetical protein MYCFIDRAFT_71922 [Pseudocercospora fijiensis
CIRAD86]
Length = 84
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E N
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATESKPNN 51
>gi|294891050|ref|XP_002773395.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239878548|gb|EER05211.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 85
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
DL KF++K + +KL G R V G L+GYDQ +NLVLD AVE +
Sbjct: 15 DLRKFMEKRLDLKLNGNRHVVGVLRGYDQFMNLVLDNAVELV 56
>gi|403372169|gb|EJY85976.1| Small nuclear ribonucleoprotein G, putative [Oxytricha trifallax]
Length = 709
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
M+ ++ DL KF+D V ++L R V G LKGYDQ LN+VLD A+E +
Sbjct: 1 MASKQGYGADLRKFMDLRVDLRLNANRHVAGVLKGYDQFLNIVLDNAIEII 51
>gi|351714344|gb|EHB17263.1| Small nuclear ribonucleoprotein G, partial [Heterocephalus
glaber]
Length = 60
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVI 94
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 60
>gi|443899154|dbj|GAC76485.1| hypothetical protein PANT_22d00050 [Pseudozyma antarctica T-34]
Length = 536
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 32/40 (80%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L +F+DK + V + GGR+V GTL+G+D LNLV+D+A+E
Sbjct: 8 ELKRFLDKRIAVNIQGGRKVQGTLRGFDMFLNLVVDDAIE 47
>gi|71026359|ref|XP_762856.1| U6 snRNA-associated protein [Theileria parva strain Muguga]
gi|68349808|gb|EAN30573.1| U6 snRNA-associated protein, putative [Theileria parva]
Length = 104
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++V++L K ++K V VK +GGR+V G L+G+D + NLVLD+ VE+L+
Sbjct: 12 KSVINLNKHLNKEVYVKFSGGREVKGVLRGHDAMSNLVLDDTVEYLK 58
>gi|395731711|ref|XP_003775950.1| PREDICTED: small nuclear ribonucleoprotein G [Pongo abelii]
Length = 96
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVI 94
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 60
>gi|340725441|ref|XP_003401078.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus terrestris]
gi|350403951|ref|XP_003486961.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Bombus impatiens]
gi|307172241|gb|EFN63758.1| Probable small nuclear ribonucleoprotein G [Camponotus
floridanus]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V G L+G+D +N+V+DE+VE + N I ++V
Sbjct: 3 KAHPPELKKYMDKRLSLKLNGGRHVIGILRGFDPFMNMVIDESVEECKDGTKNNIGMVV 61
>gi|307214549|gb|EFN89534.1| Probable small nuclear ribonucleoprotein G [Harpegnathos
saltator]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GR VTG L+G+D +N+V+DE VE + N I ++V
Sbjct: 3 KAHPPELKKYMDKKLSLKLNAGRHVTGILRGFDPFMNMVIDETVEECKDGTKNNIGMVV 61
>gi|426238536|ref|XP_004013207.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGLDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|321461226|gb|EFX72260.1| hypothetical protein DAPPUDRAFT_189031 [Daphnia pulex]
Length = 77
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
K +L K++DK + +KL GGR + G L+G+D +NLV+DE VE ++ N I ++V
Sbjct: 3 KAHPPELKKYMDKRMSLKLNGGRNIVGILRGFDPFMNLVIDETVEEVKDGSKNNIGMVVV 62
>gi|195447608|ref|XP_002071290.1| GK25208 [Drosophila willistoni]
gi|194167375|gb|EDW82276.1| GK25208 [Drosophila willistoni]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V G L+G+D +N+VLD+ +E + N N I ++V
Sbjct: 3 KAHPPELKKYMDKRMMLKLNGGRAVNGILRGFDPFMNVVLDDTIEECKDNTKNNIGMVV 61
>gi|452842262|gb|EME44198.1| hypothetical protein DOTSEDRAFT_71875 [Dothistroma septosporum
NZE10]
Length = 85
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATE 46
>gi|432864568|ref|XP_004070353.1| PREDICTED: small nuclear ribonucleoprotein G-like [Oryzias
latipes]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+D+ +E G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVMDDCLEMGPGGQQNTIGMVV 61
>gi|66525153|ref|XP_625205.1| PREDICTED: probable small nuclear ribonucleoprotein G [Apis
mellifera]
gi|380016176|ref|XP_003692064.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Apis
florea]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V G L+G+D +N+V+DE++E + N I ++V
Sbjct: 3 KAHPPELKKYMDKKLSLKLNGGRHVIGILRGFDPFMNMVIDESIEECKDGTKNNIGMVV 61
>gi|410930990|ref|XP_003978880.1| PREDICTED: small nuclear ribonucleoprotein G-like [Takifugu
rubripes]
gi|47207638|emb|CAF90891.1| unnamed protein product [Tetraodon nigroviridis]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE +E G + I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDETLEMGPGGQQSSIGMVV 61
>gi|402861349|ref|XP_003895059.1| PREDICTED: small nuclear ribonucleoprotein G-like [Papio anubis]
Length = 76
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR+V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRRVQGILQGFDPFMNLVIDECVEMAISGQQNNIGMVV 61
>gi|383851818|ref|XP_003701428.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Megachile rotundata]
Length = 76
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V G L+G+D +N+V+DE++E + N I ++V
Sbjct: 3 KAHPPELKKYMDKRLSLKLNGGRHVVGILRGFDPFMNMVIDESIEECKDGTKNNIGMVV 61
>gi|109122308|ref|XP_001087684.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
gi|354490736|ref|XP_003507512.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344246755|gb|EGW02859.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|355565765|gb|EHH22194.1| hypothetical protein EGK_05417, partial [Macaca mulatta]
Length = 95
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVI 94
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 60
>gi|225440849|ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
vinifera]
gi|297740131|emb|CBI30313.3| unnamed protein product [Vitis vinifera]
Length = 80
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE-VNGNEKTDIGMVV 61
>gi|410957729|ref|XP_003985477.1| PREDICTED: small nuclear ribonucleoprotein G-like [Felis catus]
Length = 76
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D ++LV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDSFMHLVIDECVEMATSGQQNNIGMVV 61
>gi|332018098|gb|EGI58712.1| Putative small nuclear ribonucleoprotein G [Acromyrmex
echinatior]
Length = 76
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR+V G L+G+D +N+V+DE++E + N I ++V
Sbjct: 3 KAHPPELKKYMDKRLSLKLNGGRRVVGILRGFDPFMNMVIDESIEECKDGTKNNIGMVV 61
>gi|392568108|gb|EIW61282.1| like-Sm ribonucleo protein [Trametes versicolor FP-101664 SS1]
gi|395328913|gb|EJF61303.1| like-Sm ribonucleo protein [Dichomitus squalens LYAD-421 SS1]
gi|449549694|gb|EMD40659.1| hypothetical protein CERSUDRAFT_111239 [Ceriporiopsis
subvermispora B]
Length = 77
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDALE 47
>gi|426195723|gb|EKV45652.1| hypothetical protein AGABI2DRAFT_72502 [Agaricus bisporus var.
bisporus H97]
Length = 78
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L K++DK + V L GGR+V+GTL+GYD LNLV+D+A+E
Sbjct: 3 KASQPELKKYMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDAIE 47
>gi|336373417|gb|EGO01755.1| hypothetical protein SERLA73DRAFT_177234 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386246|gb|EGO27392.1| hypothetical protein SERLADRAFT_460722 [Serpula lacrymans var.
lacrymans S7.9]
Length = 77
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRRVSGTLRGYDLFLNLVIDDALE 47
>gi|358421445|ref|XP_003584961.1| PREDICTED: small nuclear ribonucleoprotein G-like [Bos taurus]
gi|296486781|tpg|DAA28894.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 76
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRLVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|109048997|ref|XP_001112504.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 76
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHSPELKKFMDKKLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMAISGQQNNIGMVV 61
>gi|403301993|ref|XP_003941654.1| PREDICTED: small nuclear ribonucleoprotein G-like [Saimiri
boliviensis boliviensis]
Length = 76
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|390601213|gb|EIN10607.1| like-Sm ribonucleo protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 77
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+GTL+GYD LNLV+D+A+E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGTLRGYDLFLNLVIDDALE 47
>gi|193713710|ref|XP_001949387.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Acyrthosiphon pisum]
Length = 79
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L +++DK + +KL RQV G L+G+D +NLVLDE VE ++ + N I ++V
Sbjct: 3 KAHPPELKRYLDKKLSLKLNANRQVAGVLRGFDPFMNLVLDETVEKIKDGVVNSIGMVV 61
>gi|453085821|gb|EMF13864.1| LSM-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 84
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK V+V+L G R+V GTL+GYD LN+VLDEA E
Sbjct: 7 ELKKYLDKRVEVQLNGSRKVMGTLRGYDVFLNIVLDEATE 46
>gi|393215720|gb|EJD01211.1| like-Sm ribonucleo protein [Fomitiporia mediterranea MF3/22]
Length = 77
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+GTL+G+D LNLVLD+A+E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGTLRGFDIFLNLVLDDAIE 47
>gi|346468165|gb|AEO33927.1| hypothetical protein [Amblyomma maculatum]
Length = 99
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + ++L G R +TG L+G+D +NLVLDE VE +G + I ++V
Sbjct: 3 KAHPPELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEKHNIGMVV 61
>gi|116780179|gb|ABK21578.1| unknown [Picea sitchensis]
gi|116780948|gb|ABK21894.1| unknown [Picea sitchensis]
Length = 80
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK + +KL R V GTL+G+DQ +NLVLD VE + GN N I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLNIKLNANRVVVGTLRGFDQFMNLVLDGTVE-VNGNERNEIGMVV 61
>gi|348540852|ref|XP_003457901.1| PREDICTED: small nuclear ribonucleoprotein G-like [Oreochromis
niloticus]
Length = 76
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D +NLV+D+ +E G N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVVDDCLEMGPGGQQNTIGMVV 61
>gi|115473291|ref|NP_001060244.1| Os07g0608700 [Oryza sativa Japonica Group]
gi|113611780|dbj|BAF22158.1| Os07g0608700 [Oryza sativa Japonica Group]
Length = 67
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVI 94
R DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN N I ++
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE-VNGNEKNDIGMV 60
>gi|17510511|ref|NP_491032.1| Protein SNR-7 [Caenorhabditis elegans]
gi|29428018|sp|Q9N4G9.1|RUXG_CAEEL RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|12276019|gb|AAG50222.1|AF303264_1 SM protein G [Caenorhabditis elegans]
gi|351062434|emb|CCD70411.1| Protein SNR-7 [Caenorhabditis elegans]
Length = 77
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR--GNLYNGIFVI 94
K +L K++DK + +KL G R+V+G L+G+D +N+V+DEAVE+ + G++ G+ VI
Sbjct: 3 KTHPPELKKYMDKEMDLKLNGNRRVSGILRGFDPFMNMVIDEAVEYQKDGGSVNLGMTVI 62
>gi|112253333|gb|ABI14254.1| small nuclear ribonucleoprotein polypeptide G [Pfiesteria
piscicida]
Length = 78
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL KF++K + +KLT R V G L+GYDQ +N+VLD VE N I ++V
Sbjct: 9 DLRKFMEKRLDLKLTANRHVVGVLRGYDQFMNIVLDNTVEIASPTEKNEIGMVV 62
>gi|109510961|ref|XP_001057009.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392343298|ref|XP_003754845.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392355788|ref|XP_003752134.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D ++LV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILQGFDPFMSLVIDECVEMATSGQQNNIGMVV 61
>gi|226295235|gb|EEH50655.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb18]
Length = 81
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 32/43 (74%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
++K V VK G R+VTGTLKGYDQL+NLVLD+ E +R + N
Sbjct: 1 MEKEVCVKFNGAREVTGTLKGYDQLMNLVLDDVKEVMRDDEDN 43
>gi|302309677|ref|XP_002999529.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049117|emb|CAR58012.1| unnamed protein product [Candida glabrata]
Length = 76
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+L K+VDK + ++L G RQV G L+GYD LN+VLD+A+E L+
Sbjct: 6 ELKKYVDKKILLQLNGSRQVAGVLRGYDLFLNVVLDDAIELLK 48
>gi|428181287|gb|EKX50151.1| small nuclear ribonucleo protein polypeptide G [Guillardia theta
CCMP2712]
Length = 78
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIF 92
MSG+ DL K++DK V +KL R +TG L+GYDQ +NLVLD E + N I
Sbjct: 1 MSGKGGP--DLKKYMDKRVTLKLNANRNITGILRGYDQFMNLVLDHTQEVVTPTQRNEIG 58
Query: 93 VIV 95
++V
Sbjct: 59 MVV 61
>gi|355751391|gb|EHH55646.1| hypothetical protein EGM_04892 [Macaca fascicularis]
Length = 76
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L+G+D + LV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMTLVIDECVEMATSGQQNNIGMVV 61
>gi|334349064|ref|XP_003342141.1| PREDICTED: small nuclear ribonucleoprotein G-like [Monodelphis
domestica]
Length = 76
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K + +L KF+DK + +KL GGR + G L+G D +NLV DE VE G N I ++V
Sbjct: 3 KAYLPELKKFMDKKLSLKLNGGRPIQGILRGSDLFMNLVADECVEMAPGGQQNNIGMVV 61
>gi|327291504|ref|XP_003230461.1| PREDICTED: small nuclear ribonucleoprotein G-like, partial
[Anolis carolinensis]
Length = 65
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
F+DK + +KL GGR V G L+G+D +NLV+DE VE G N I ++V
Sbjct: 1 FMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGMVV 50
>gi|350535404|ref|NP_001232194.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
gi|197127873|gb|ACH44371.1| putative small nuclear ribonucleoprotein polypeptide G
[Taeniopygia guttata]
Length = 74
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
K +L KF+DK + +KL GGR V G L+G+D +NLV+DE VE
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEI 48
>gi|354482503|ref|XP_003503437.1| PREDICTED: small nuclear ribonucleoprotein G-like [Cricetulus
griseus]
gi|344245943|gb|EGW02047.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 76
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
L KF+DK + +KL GGR V G L+G++ +NLV+DE VE N I ++V
Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFNPFMNLVIDECVEMATSGPQNNIGMVV 61
>gi|427784695|gb|JAA57799.1| Putative small ribonucleoprotein particle protein smg
[Rhipicephalus pulchellus]
Length = 77
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
K +L K++DK + ++L G R VTG L+G+D +NLVLDE VE +G + I ++V
Sbjct: 3 KAHPPELKKYMDKKLSLRLNGSRVVTGILRGFDPFMNLVLDETVEETKGGEKHNIGMVVV 62
>gi|296488612|tpg|DAA30725.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 76
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K L KF+DK + +KL GGR V G L G+D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPKLKKFMDKKLSLKLNGGRHVQGILWGFDPFMNLVIDECVEMATSGQQNNIGMVV 61
>gi|343428207|emb|CBQ71737.1| probable SMX2-snRNP G protein [Sporisorium reilianum SRZ2]
Length = 87
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+L +F+DK + V + GGR++ GTL+G+D LNLV+D+AVE +R N
Sbjct: 8 ELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDDAVEQVRPEAGN 55
>gi|194694128|gb|ACF81148.1| unknown [Zea mays]
gi|195637264|gb|ACG38100.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195645546|gb|ACG42241.1| small nuclear ribonucleoprotein G [Zea mays]
gi|413955444|gb|AFW88093.1| Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVIDNTVE-VNGNDKTDIGMVV 61
>gi|196476795|gb|ACG76261.1| small nuclear ribonucleoprotein G [Amblyomma americanum]
Length = 77
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
K +L K++DK + ++L G R +TG L+G+D +NLVLDE VE +G + I ++V
Sbjct: 3 KAHPPELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEEAKGGEKHNIGMVVV 62
>gi|187610687|gb|ACD13592.1| small nuclear ribonucleoprotein polypeptide G [Penaeus monodon]
gi|408842889|gb|AFU93450.1| small nuclear ribonucleoprotein polypeptide G [Litopenaeus
vannamei]
Length = 77
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
K +L K++DK V KL GGR V GTL+G+D +NLV+D+ VE R +G V V
Sbjct: 3 KAHPPELKKYMDKRVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVEVRR----SGDRVRVG 58
Query: 97 FLLV 100
F+++
Sbjct: 59 FVVI 62
>gi|322800993|gb|EFZ21774.1| hypothetical protein SINV_00836 [Solenopsis invicta]
Length = 76
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V G L+G+D +N+V+DE++E + N I ++V
Sbjct: 3 KAHPPELKKYMDKRLSLKLNGGRTVIGILRGFDPFMNMVIDESIEECKDGTKNNIGMVV 61
>gi|168067143|ref|XP_001785484.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662891|gb|EDQ49691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 77
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
DL K++DK + +KL GR V G L+G+DQ +NLVLD VE
Sbjct: 9 DLKKYMDKKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVEI 49
>gi|124805657|ref|XP_001350501.1| lsm7 homologue, putative [Plasmodium falciparum 3D7]
gi|23496624|gb|AAN36181.1| lsm7 homologue, putative [Plasmodium falciparum 3D7]
Length = 108
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
D+ KF+++ ++VK GGR+V GTL G+D + NLVLD+ E++R N FV+
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGTLIGHDAIFNLVLDKTEEYIRD--PNDSFVVT 71
>gi|294887859|ref|XP_002772254.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239876324|gb|EER04070.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 87
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
DL +F++K + VKL R V G ++GYDQ +NLVLD AVE +
Sbjct: 16 DLRRFMEKRIDVKLNADRHVVGVVRGYDQFMNLVLDNAVELV 57
>gi|255578959|ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
gi|223530136|gb|EEF32048.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
Length = 80
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE 48
>gi|71006012|ref|XP_757672.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
gi|46097347|gb|EAK82580.1| hypothetical protein UM01525.1 [Ustilago maydis 521]
Length = 134
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 12 FFIVCRSARVS---FNLGFLKSL-KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKG 67
+ +CR++ + L L+ L KM+ K + +L +F+DK + V + GGR++ GTL+G
Sbjct: 23 LYALCRTSSLHDLYLPLAQLEVLRKMA--KVSQPELKRFLDKRIAVNIQGGRKIQGTLRG 80
Query: 68 YDQLLNLVLDEAVE 81
+D LNLV+DEA+E
Sbjct: 81 FDMFLNLVVDEAIE 94
>gi|294950648|ref|XP_002786721.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239901040|gb|EER18517.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 87
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
DL +F++K + VKL R V G ++GYDQ +NLVLD AVE +
Sbjct: 16 DLRRFMEKRIDVKLNADRHVVGVVRGYDQFMNLVLDNAVELV 57
>gi|149744765|ref|XP_001500582.1| PREDICTED: small nuclear ribonucleoprotein G-like [Equus
caballus]
Length = 76
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L G+D +NLV+DE VE N I ++V
Sbjct: 3 KAQPPELKKFMDKKLSLKLHGGRHVQGILWGFDPFVNLVIDECVEMTTSGQQNNIGMVV 61
>gi|449451158|ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
gi|449482341|ref|XP_004156252.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Cucumis sativus]
Length = 80
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 9 DLKKYMDKKLQIKLNANRLVIGTLRGFDQFMNLVVDNTVE-VNGNEKTDIGMVV 61
>gi|355567875|gb|EHH24216.1| hypothetical protein EGK_07838 [Macaca mulatta]
Length = 76
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + KL GGR V G L+ +D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSSKLNGGRHVQGILRAFDPFMNLVIDEYVEMATSGQQNNIGMVV 61
>gi|195144580|ref|XP_002013274.1| GL24044 [Drosophila persimilis]
gi|198452776|ref|XP_002137534.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
gi|194102217|gb|EDW24260.1| GL24044 [Drosophila persimilis]
gi|198132072|gb|EDY68092.1| GA26490 [Drosophila pseudoobscura pseudoobscura]
Length = 76
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR VTG L+G+D +N+VLD+ +E + N + ++V
Sbjct: 3 KAHPPELKKYMDKRMMLKLNGGRAVTGILRGFDPFMNVVLDDTIEECKDKTKNNVGMVV 61
>gi|345778417|ref|XP_003431727.1| PREDICTED: uncharacterized protein LOC100682645 [Canis lupus
familiaris]
Length = 181
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
L KF+DK + +KL GR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 114 LKKFMDKKLSLKLNDGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNIGMVV 166
>gi|324514246|gb|ADY45805.1| Small nuclear ribonucleoprotein G [Ascaris suum]
Length = 79
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL G R V+G L+G+D +N+V+++AVE L+ N + ++V
Sbjct: 3 KTHPPELKKYMDKHMDLKLNGNRHVSGVLRGFDPFMNIVVEDAVEHLKNGESNTLGMVV 61
>gi|224088536|ref|XP_002308466.1| predicted protein [Populus trichocarpa]
gi|222854442|gb|EEE91989.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE 48
>gi|340370971|ref|XP_003384019.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
[Amphimedon queenslandica]
Length = 78
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
MSGR +L K++DK +Q++L G R +TG L+G+D +N+VLD+ VE
Sbjct: 1 MSGRAHPP-ELKKYMDKRLQLRLNGNRTITGILRGFDPYMNVVLDDCVE 48
>gi|426257282|ref|XP_004022258.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K L KF+DK + +KL GGR V G L+G+D +NLV+DE VE N ++V
Sbjct: 3 KAHPPKLKKFMDKKLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNTGMVV 61
>gi|242040617|ref|XP_002467703.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
gi|241921557|gb|EER94701.1| hypothetical protein SORBIDRAFT_01g032730 [Sorghum bicolor]
Length = 81
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE-VNGNDKTDIGMVV 61
>gi|442754995|gb|JAA69657.1| Putative small nuclear ribonucleoprotein g [Ixodes ricinus]
Length = 77
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
K +L K++DK + ++L G R +TG L+G+D +NLVLDE VE +G + I ++V
Sbjct: 3 KAHPPELKKYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEKHDIGMVVV 62
>gi|118483312|gb|ABK93558.1| unknown [Populus trichocarpa]
Length = 80
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE 48
>gi|357159383|ref|XP_003578429.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 1 [Brachypodium distachyon]
gi|357159386|ref|XP_003578430.1| PREDICTED: probable small nuclear ribonucleoprotein G-like
isoform 2 [Brachypodium distachyon]
Length = 81
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+K+ R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE-VNGNEKTDIGMVV 61
Query: 96 C 96
Sbjct: 62 V 62
>gi|115453489|ref|NP_001050345.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|37991869|gb|AAR06315.1| putative small nuclear ribonucleoprotein polypeptide G [Oryza
sativa Japonica Group]
gi|108708766|gb|ABF96561.1| small nuclear ribonucleoprotein G, putative, expressed [Oryza
sativa Japonica Group]
gi|113548816|dbj|BAF12259.1| Os03g0410900 [Oryza sativa Japonica Group]
gi|125544286|gb|EAY90425.1| hypothetical protein OsI_12008 [Oryza sativa Indica Group]
gi|125586635|gb|EAZ27299.1| hypothetical protein OsJ_11235 [Oryza sativa Japonica Group]
gi|215769229|dbj|BAH01458.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 80
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+KL R + GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRVIVGTLRGFDQFMNLVVDNTVE-VNGNDKTDIGMVV 61
Query: 96 C 96
Sbjct: 62 V 62
>gi|401411851|ref|XP_003885373.1| hypothetical protein NCLIV_057680 [Neospora caninum Liverpool]
gi|325119792|emb|CBZ55345.1| hypothetical protein NCLIV_057680 [Neospora caninum Liverpool]
Length = 169
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
G+ DL +F++K + V L+GGR+V G L+GYD +N+VL+ VE ++GN N
Sbjct: 6 GKAGPAADLRRFMEKRLDVHLSGGRRVVGVLRGYDTFMNIVLENTVE-VKGNPAN 59
>gi|114577940|ref|XP_001142444.1| PREDICTED: small nuclear ribonucleoprotein G isoform 3 [Pan
troglodytes]
Length = 85
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+F+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 20 RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 70
>gi|402590109|gb|EJW84040.1| hypothetical protein WUBG_05049 [Wuchereria bancrofti]
Length = 79
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK V +KL G R V+G L+G+D +N+V+++AVE L+ N I ++V
Sbjct: 3 KTHPPELKKYMDKQVDLKLNGNRSVSGILRGFDPFMNIVVEDAVENLKSGDKNEIGMVV 61
>gi|397600435|gb|EJK57654.1| hypothetical protein THAOC_22279 [Thalassiosira oceanica]
Length = 78
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
S + + DL +F+DK +++ L G R+V GTL+GYD LN+VL+EA+
Sbjct: 3 SSKHQKGPDLKRFMDKRLKLSLNGNRKVVGTLRGYDAFLNVVLEEAMP 50
>gi|58382854|ref|XP_312222.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|170033098|ref|XP_001844416.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|55242066|gb|EAA07689.2| AGAP002706-PA [Anopheles gambiae str. PEST]
gi|167873530|gb|EDS36913.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 76
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL GGR V+G L+G+D +N+V+DE++E + N I ++V
Sbjct: 3 KAHPPELKKYMDKRLSLKLNGGRVVSGILRGFDPFMNVVVDESIEECKDGTRNNIGMVV 61
>gi|15229773|ref|NP_187757.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
gi|297833932|ref|XP_002884848.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|12322914|gb|AAG51452.1|AC008153_25 putative small nuclear ribonucleoprotein polypeptide G;
65009-64161 [Arabidopsis thaliana]
gi|17065484|gb|AAL32896.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|24899751|gb|AAN65090.1| putative small nuclear ribonucleoprotein polypeptide G
[Arabidopsis thaliana]
gi|297330688|gb|EFH61107.1| hypothetical protein ARALYDRAFT_478489 [Arabidopsis lyrata subsp.
lyrata]
gi|332641534|gb|AEE75055.1| small nuclear ribonucleoprotein G [Arabidopsis thaliana]
Length = 79
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
R DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE
Sbjct: 3 RSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVE 48
>gi|170576974|ref|XP_001893831.1| small nuclear ribonucleoprotein G [Brugia malayi]
gi|312077085|ref|XP_003141148.1| small nuclear ribonucleoprotein G [Loa loa]
gi|158599912|gb|EDP37330.1| small nuclear ribonucleoprotein G, putative [Brugia malayi]
gi|307763686|gb|EFO22920.1| small nuclear ribonucleoprotein G [Loa loa]
Length = 79
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK V +KL G R V+G L+G+D +N+V+++AVE L+ N I ++V
Sbjct: 3 KTHPPELKKYMDKQVDLKLNGNRSVSGILRGFDPFMNIVVEDAVENLKNGDKNEIGMVV 61
>gi|237830743|ref|XP_002364669.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
ME49]
gi|211962333|gb|EEA97528.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
ME49]
gi|221487756|gb|EEE25988.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
GT1]
gi|221507550|gb|EEE33154.1| small nuclear ribonucleoprotein E/G, putative [Toxoplasma gondii
VEG]
Length = 93
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
G+ DL +F++K + V L+GGR+V G L+GYD +N+VL+ VE ++GN N
Sbjct: 6 GKAGPAADLRRFMEKRLDVHLSGGRRVVGVLRGYDTFMNIVLENTVE-VKGNPAN 59
>gi|409049871|gb|EKM59348.1| hypothetical protein PHACADRAFT_169890 [Phanerochaete carnosa
HHB-10118-sp]
Length = 77
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+G L+GYD LNLVLD+A+E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGVLRGYDLFLNLVLDDALE 47
>gi|397521832|ref|XP_003830990.1| PREDICTED: small nuclear ribonucleoprotein G [Pan paniscus]
Length = 85
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+F+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 20 RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 70
>gi|156087671|ref|XP_001611242.1| LSM domain containing protein [Babesia bovis]
gi|154798496|gb|EDO07674.1| LSM domain containing protein [Babesia bovis]
Length = 103
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 38 ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++V+ L +++K V VK +GGR+V G L+G+D + NLVLDE EFLR
Sbjct: 12 KSVIKLDAYLNKKVYVKFSGGREVQGILRGHDVMSNLVLDETEEFLR 58
>gi|350297191|gb|EGZ78168.1| U6 snRNA-associated Sm-like protein LSm7 [Neurospora tetrasperma
FGSC 2509]
Length = 82
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+D+ + VK GGR+VTGTLKGYD L+NLVLD+ E +R N
Sbjct: 1 MDQRITVKFNGGREVTGTLKGYDALMNLVLDDVQEAVRDEEGN 43
>gi|403363323|gb|EJY81404.1| Small nuclear ribonucleoprotein polypeptide G [Oxytricha
trifallax]
Length = 79
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
M+ ++ DL KF+D V ++L R V G LKGYDQ LN+VLD A+E +
Sbjct: 1 MASKQGYGADLRKFMDLRVDLRLNANRHVAGVLKGYDQFLNIVLDNAIEII 51
>gi|226509589|ref|NP_001148720.1| small nuclear ribonucleoprotein G [Zea mays]
gi|194698570|gb|ACF83369.1| unknown [Zea mays]
gi|195609740|gb|ACG26700.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195621638|gb|ACG32649.1| small nuclear ribonucleoprotein G [Zea mays]
gi|195656303|gb|ACG47619.1| small nuclear ribonucleoprotein G [Zea mays]
gi|414867200|tpg|DAA45757.1| TPA: Small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+K+ R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE-VNGNDKTDIGMVV 61
>gi|260786161|ref|XP_002588127.1| hypothetical protein BRAFLDRAFT_124953 [Branchiostoma floridae]
gi|229273285|gb|EEN44138.1| hypothetical protein BRAFLDRAFT_124953 [Branchiostoma floridae]
Length = 874
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 23 FNLGFLKSLKMSGRKETVLDLAKF-----VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD 77
+ L F + SG + TVL +A V +V+L G R+V+G L+G+D +NLV+D
Sbjct: 782 YCLAFTYNGSSSGSQPTVLLMAVMWSCAAVKLAAEVQLNGNRKVSGILRGFDPFMNLVID 841
Query: 78 EAVEFLRGNLYNGIFVIV 95
E VE LRGN I ++V
Sbjct: 842 ECVE-LRGNERQSIGMVV 858
>gi|384244771|gb|EIE18269.1| small nuclear ribonucleo protein polypeptide G [Coccomyxa
subellipsoidea C-169]
Length = 73
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L KF+DK + V L RQVTG L+G+DQ +N+VLD AV+
Sbjct: 8 ELKKFMDKKLSVSLNANRQVTGVLRGFDQFMNIVLDNAVD 47
>gi|205829943|sp|A8MWD9.2|RUXGL_HUMAN RecName: Full=Small nuclear ribonucleoprotein G-like protein
Length = 76
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
K +L KF DK +KL GGR V G L+G+D +NLV+DE VE
Sbjct: 3 KAHPPELKKFTDKKFSLKLNGGRHVQGILRGFDPFMNLVIDECVEM 48
>gi|344250803|gb|EGW06907.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 82
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+F+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 17 RFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 67
>gi|392592906|gb|EIW82232.1| like-Sm ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 77
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + V L GGR+V+G L+GYD LNLV+D+A+E
Sbjct: 3 KASQPELKKFMDKKLFVHLQGGRKVSGILRGYDLFLNLVIDDALE 47
>gi|389585573|dbj|GAB68303.1| U6 snRNA-associated Sm-like protein LSm7 [Plasmodium cynomolgi
strain B]
Length = 114
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
D+ KF+++ ++VK GGR+V G L G+D + NLVLD+ E++R N FVI
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIRD--PNDSFVIT 70
>gi|109465326|ref|XP_001075060.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL G R+V G L+G+D NLV+DE VE + N I +V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGTRRVQGILRGFDPFTNLVIDECVEMVTSGQQNNIGTVV 61
>gi|326517334|dbj|BAK00034.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 80
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D VE
Sbjct: 9 DLKKYMDKKLQIKLNANRVVIGTLRGFDQFMNLVVDNTVE 48
>gi|168049678|ref|XP_001777289.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671391|gb|EDQ57944.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 76
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL K++D+ + +KL GR V G L+G+DQ +NLVLD VE ++G N I ++V
Sbjct: 9 DLKKYMDRKLNIKLNAGRNVVGVLRGFDQFMNLVLDNTVE-VQGAEKNEIGMVV 61
>gi|68062334|ref|XP_673172.1| u6 snRNA-associated Sm-like protein [Plasmodium berghei strain
ANKA]
gi|56490825|emb|CAH96266.1| u6 snRNA-associated Sm-like protein, putative [Plasmodium
berghei]
Length = 108
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
D+ KF+++ ++VK GGR+V G L G+D + NLVLD+ EF+R
Sbjct: 20 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEFIR 62
>gi|156101744|ref|XP_001616565.1| U6 snRNA-associated Sm-like protein LSm7 [Plasmodium vivax Sal-1]
gi|148805439|gb|EDL46838.1| U6 snRNA-associated Sm-like protein LSm7, putative [Plasmodium
vivax]
Length = 107
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
D+ KF+++ ++VK GGR+V G L G+D + NLVLD+ E++R N FVI
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIRD--PNDSFVIT 70
>gi|384487006|gb|EIE79186.1| hypothetical protein RO3G_03891 [Rhizopus delemar RA 99-880]
Length = 96
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVCFLL 99
++K ++V+ GGR+V GTL GYD LLNLVLD E+ +G Y ++V V LL
Sbjct: 1 MEKKIRVRFNGGREVVGTLMGYDPLLNLVLDNTTEYQKGLCY--LYVKVANLL 51
>gi|332253185|ref|XP_003275727.1| PREDICTED: small nuclear ribonucleoprotein G-like [Nomascus
leucogenys]
Length = 89
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVI 94
K +L KF+DK + +KL GR V G L+G+D +NLV+DE VE N I ++
Sbjct: 16 KAHPPELKKFMDKKLSLKLNDGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 73
>gi|342326346|gb|AEL23088.1| small nuclear ribonucleoprotein polypeptide G [Cherax
quadricarinatus]
Length = 77
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K +L K++DK V KL GGR V GTL+G+D +NLV+D+ VE
Sbjct: 3 KAHPPELKKYMDKRVMTKLNGGRVVEGTLRGFDPFMNLVVDDGVE 47
>gi|195606768|gb|ACG25214.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 80
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
R DL K++DK +Q+K+ R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 3 RSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNIVE-VNGNDKTDIGMVV 61
>gi|293345587|ref|XP_002726075.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL G R+V G L+G+D +NLV+DE VE + N I +V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGTRRVQGILRGFDPFMNLVIDECVEMVTSGQQNIIGTVV 61
>gi|296484107|tpg|DAA26222.1| TPA: small nuclear ribonucleoprotein polypeptide G-like [Bos
taurus]
Length = 75
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +DK V +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 10 KSMDKKVSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNIGMVV 60
>gi|333449426|gb|AEF33399.1| small nuclear ribonucleoprotein polypeptide G protein
[Crassostrea ariakensis]
Length = 77
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K+++K + +KL GGRQ+ G L+G+D +NLV+DE +E + N I ++V
Sbjct: 3 KAHPPELKKYMEKKINLKLNGGRQIQGILRGFDPFMNLVVDECIEETKLGERNQIGMVV 61
>gi|302404042|ref|XP_002999859.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361361|gb|EEY23789.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 85
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L GGR+V G L+GYD LN+VLDEAVE G
Sbjct: 7 ELKKYLDKRLFVQLNGGRKVIGVLRGYDVFLNIVLDEAVEEKEG 50
>gi|109112083|ref|XP_001087555.1| PREDICTED: small nuclear ribonucleoprotein G-like [Macaca
mulatta]
Length = 76
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + KL GGR V G L +D +NLV+DE VE N I ++V
Sbjct: 3 KAHPPELKKFMDKKLSSKLNGGRHVQGILWAFDPFMNLVIDEYVEMATSGQQNNIGMVV 61
>gi|224138462|ref|XP_002322820.1| predicted protein [Populus trichocarpa]
gi|222867450|gb|EEF04581.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL K++DK +Q+KL R V GTL+G+DQ +NLV+D V+
Sbjct: 9 DLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVD 48
>gi|134126|sp|P24715.1|RUXG_MEDSA RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|19573|emb|CAA44975.1| snRNP-related protein [Medicago sativa]
Length = 81
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
L K++DK +Q+ L R + GTL+G+DQ +NLV+D VE + GN N I ++V
Sbjct: 10 LKKYMDKQLQINLKANRMIVGTLRGFDQFMNLVVDNTVE-VNGNEKNDIGMVV 61
>gi|156097813|ref|XP_001614939.1| small nuclear ribonucleoprotein G [Plasmodium vivax Sal-1]
gi|148803813|gb|EDL45212.1| small nuclear ribonucleoprotein G, putative [Plasmodium vivax]
gi|389582433|dbj|GAB65171.1| small nuclear ribonucleoprotein G [Plasmodium cynomolgi strain B]
Length = 83
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN-GIFV 93
G+ D KF++K +QV L G RQ+ G L+GYD +NLVLD VE + + GI V
Sbjct: 6 GKAGPASDFRKFMEKRLQVYLNGNRQIVGVLRGYDTFMNLVLDNTVEIKKEEQIDIGIVV 65
Query: 94 I 94
I
Sbjct: 66 I 66
>gi|299117056|emb|CBN73827.1| small nuclear ribonucleoprotein polypeptide G [Ectocarpus
siliculosus]
Length = 75
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVCFLLVC 101
DL +++DK + +KL G R V G L+GYD +NLVLDE + + G+ +I +V
Sbjct: 7 DLKRYMDKTLSLKLNGNRTVKGVLRGYDPFMNLVLDETTDPASSDKKMGMVIIRGNSVVQ 66
Query: 102 F 102
F
Sbjct: 67 F 67
>gi|145518536|ref|XP_001445140.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412584|emb|CAK77743.1| unnamed protein product [Paramecium tetraurelia]
Length = 83
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
KE+++ L ++K V ++ GGRQV GTL +D LLNLVLDE E
Sbjct: 6 KESIIKLQSHINKEVVIQFQGGRQVKGTLLSFDNLLNLVLDEVREL 51
>gi|426335864|ref|XP_004029426.1| PREDICTED: small nuclear ribonucleoprotein G [Gorilla gorilla
gorilla]
Length = 101
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVI 94
+F+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++
Sbjct: 15 GEFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV 65
>gi|388852751|emb|CCF53669.1| probable SMX2-snRNP G protein [Ustilago hordei]
Length = 87
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+L +F+DK + V + GGR++ GTL+G+D LNLV+D+A+E + N
Sbjct: 8 ELKRFLDKRIAVNIQGGRKIQGTLRGFDMFLNLVVDDAIEQVHPEAGN 55
>gi|358390848|gb|EHK40253.1| hypothetical protein TRIATDRAFT_252624 [Trichoderma atroviride
IMI 206040]
Length = 83
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L GGR+V G L+GYD LN+VLDEAVE
Sbjct: 7 ELKKYLDKRLFVQLNGGRKVIGVLRGYDVFLNVVLDEAVE 46
>gi|443926894|gb|ELU45444.1| LSM domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 306
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L KF+DK + + L GGR+++G L+G+D LNLV+D+AVE
Sbjct: 3 KASQPELKKFMDKRLFIHLQGGRKISGVLRGFDIFLNLVVDDAVE 47
>gi|221053452|ref|XP_002258100.1| small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|193807933|emb|CAQ38637.1| small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 83
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN-GIFV 93
G+ D KF++K +QV L G RQ+ G L+GYD +NLVLD VE + + GI V
Sbjct: 6 GKAGPSSDFRKFMEKRLQVYLNGNRQIVGVLRGYDTFMNLVLDNTVEIKKEQQIDIGIVV 65
Query: 94 I 94
I
Sbjct: 66 I 66
>gi|221059904|ref|XP_002260597.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain
H]
gi|193810671|emb|CAQ42569.1| u6 snrna-associated sm-like protein [Plasmodium knowlesi strain
H]
Length = 107
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
D+ KF+++ ++VK GGR+V G L G+D + NLVLD+ E++R
Sbjct: 19 DIKKFMNQKIRVKFDGGREVVGNLIGHDAIFNLVLDKTEEYIR 61
>gi|426248212|ref|XP_004017858.1| PREDICTED: small nuclear ribonucleoprotein G-like [Ovis aries]
Length = 76
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF+DK + +KL GGR V G L G+D +NLV+DE VE N ++V
Sbjct: 3 KAHPPELKKFMDKKLSLKLNGGRLVQGILWGFDPFMNLVIDECVEMATSGQQNNFGMVV 61
>gi|134116118|ref|XP_773230.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255852|gb|EAL18583.1| hypothetical protein CNBJ0090 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 78
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+ + +L KF+D+ + + L GGRQ++G L+GYD LNLV+D A E L G
Sbjct: 3 RASQPELKKFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEELGG 51
>gi|429853426|gb|ELA28500.1| small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 104
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEG 50
>gi|405122533|gb|AFR97299.1| hypothetical protein CNAG_04914 [Cryptococcus neoformans var.
grubii H99]
Length = 78
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+ + +L KF+D+ + + L GGRQ++G L+GYD LNLV+D A E L G
Sbjct: 3 RASQPELKKFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDNAFEELGG 51
>gi|196009502|ref|XP_002114616.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582678|gb|EDV22750.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 76
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L KF++K + +K+ G R V GTL+G+D +N+VLD+ VE + N + ++V
Sbjct: 3 KAHPPELKKFMEKRLSIKINGNRTVVGTLRGFDPFMNIVLDDTVEQVSSKENNHLGMVV 61
>gi|395815302|ref|XP_003781169.1| PREDICTED: small nuclear ribonucleoprotein G-like [Otolemur
garnettii]
Length = 73
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+L K +DK + L GGR V G L+G+D L+NLV+DE +E N I ++V
Sbjct: 8 ELKKIIDKKLPWTLNGGRHVQGILQGFDTLMNLVIDECMEMSTSGQQNNIGMVV 61
>gi|241594929|ref|XP_002404416.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
gi|215500409|gb|EEC09903.1| small nuclear ribonucleoprotein G, putative [Ixodes scapularis]
Length = 76
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
++++DK + ++L G R +TG L+G+D +NLVLDE VE +G + I ++V
Sbjct: 9 SRYMDKKLSLRLNGSRVITGILRGFDPFMNLVLDETVEETKGGEKHDIGMVV 60
>gi|209879283|ref|XP_002141082.1| small nuclear ribonucleoprotein G [Cryptosporidium muris RN66]
gi|209556688|gb|EEA06733.1| small nuclear ribonucleoprotein G, putative [Cryptosporidium
muris RN66]
Length = 81
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNLYNGIFVI 94
DL +F+DK + +KL G R + G L+GYD +NLVL+ VE +GN G +I
Sbjct: 11 DLRRFMDKRLDIKLNGKRHIVGLLRGYDNFMNLVLENTVEVTSKGNKEIGTVII 64
>gi|344242125|gb|EGV98228.1| Small nuclear ribonucleoprotein G [Cricetulus griseus]
Length = 51
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
K +L K +DK + +KL GGR V G L+G+D +NLV+DE VE
Sbjct: 3 KAHPPELKKCMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEI 48
>gi|380478035|emb|CCF43823.1| LSM domain-containing protein [Colletotrichum higginsianum]
Length = 108
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEG 50
>gi|402226213|gb|EJU06273.1| like-Sm ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 77
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L KF+DK + V + GGR+V+G L+GYD LNLV+D+AVE
Sbjct: 8 ELKKFMDKRLFVYIQGGRRVSGVLRGYDIFLNLVVDDAVE 47
>gi|254583570|ref|XP_002497353.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
gi|238940246|emb|CAR28420.1| ZYRO0F03564p [Zygosaccharomyces rouxii]
Length = 76
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +L ++VDK V ++L G R+V G L+GYD LN+VLD+AVE
Sbjct: 3 STPELKRYVDKKVLLQLNGARKVAGVLRGYDLFLNVVLDDAVE 45
>gi|124512338|ref|XP_001349302.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23499071|emb|CAD51151.1| small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 83
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
G+ D KF++K +Q+ L G RQV G L+GYD +NLVLD +E
Sbjct: 6 GKAGPASDFRKFMEKRLQIYLNGNRQVVGILRGYDTFMNLVLDNTMEI 53
>gi|452825043|gb|EME32042.1| small nuclear ribonucleoprotein G [Galdieria sulphuraria]
Length = 76
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
D+ + +D+ V V+L G R+V G L+GYDQ +N+VL++ VE L
Sbjct: 7 DMKRLMDRKVSVQLNGNRKVEGVLRGYDQFMNIVLEDCVEKL 48
>gi|403216098|emb|CCK70596.1| hypothetical protein KNAG_0E03380 [Kazachstania naganishii CBS
8797]
Length = 77
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 35/46 (76%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ +L +++DK V +++ G R+V GT++G+D LN+VLD+AVE L+
Sbjct: 3 STPELKRYMDKKVVLQINGSRKVAGTMRGFDLFLNVVLDDAVELLQ 48
>gi|367011365|ref|XP_003680183.1| hypothetical protein TDEL_0C00830 [Torulaspora delbrueckii]
gi|359747842|emb|CCE90972.1| hypothetical protein TDEL_0C00830 [Torulaspora delbrueckii]
Length = 76
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+L ++VDK V +++ G R++ G L+GYD LN+VLD+AVE L+
Sbjct: 6 ELKRYVDKKVVLQVNGSRKLAGVLRGYDVFLNVVLDDAVELLK 48
>gi|310798750|gb|EFQ33643.1| LSM domain-containing protein [Glomerella graminicola M1.001]
Length = 84
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEG 50
>gi|255076665|ref|XP_002502006.1| predicted protein [Micromonas sp. RCC299]
gi|226517271|gb|ACO63264.1| predicted protein [Micromonas sp. RCC299]
Length = 81
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
V +L +++DK +++KL G R V G L+G+DQ LNLVLDEA
Sbjct: 4 AVPELKQYMDKKLRLKLNGNRGVVGVLRGFDQFLNLVLDEA 44
>gi|254565605|ref|XP_002489913.1| hypothetical protein [Komagataella pastoris GS115]
gi|238029709|emb|CAY67632.1| hypothetical protein PAS_chr1-1_0487 [Komagataella pastoris GS115]
gi|328350324|emb|CCA36724.1| U6 snRNA-associated Sm-like protein LSm7 [Komagataella pastoris CBS
7435]
Length = 156
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 36 RKETVLDLAKFVDKGVQVKLTG---GRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ ++++LA + DK +++ +G R+V G LKGYDQL+NLVLD+A E L+
Sbjct: 61 KRASIINLANYKDKQIRLTFSGVHDSREVIGCLKGYDQLMNLVLDDAEEILK 112
>gi|70944596|ref|XP_742213.1| small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56521062|emb|CAH84531.1| small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 83
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG-NLYNGIFV 93
G+ D KF++K +Q+ L G R + G L+GYD +NLVLD VE + N+ GI V
Sbjct: 6 GKAGPASDFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTVEIKKDENIEIGIVV 65
Query: 94 I 94
I
Sbjct: 66 I 66
>gi|82793460|ref|XP_728048.1| small nuclear ribonucleoprotein polypeptide G [Plasmodium yoelii
yoelii 17XNL]
gi|23484203|gb|EAA19613.1| putative small nuclear ribonucleoprotein polypeptide G
[Plasmodium yoelii yoelii]
Length = 83
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG-NLYNGIFV 93
G+ D KF++K +Q+ L G R + G L+GYD +NLVLD VE + N+ GI V
Sbjct: 6 GKAGPASDFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTVEIKKDENIEIGIVV 65
Query: 94 I 94
I
Sbjct: 66 I 66
>gi|440797084|gb|ELR18179.1| small nuclear ribonucleoprotein G, putative [Acanthamoeba
castellanii str. Neff]
Length = 76
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 37/54 (68%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL +++DK + ++L R+V+G L+G+DQ +NLVL++ VE + N + ++V
Sbjct: 8 DLRRYMDKKLAIRLNANRRVSGILRGFDQFMNLVLEDTVEEVSSTEKNELGMVV 61
>gi|346971880|gb|EGY15332.1| hypothetical protein VDAG_06186 [Verticillium dahliae VdLs.17]
Length = 85
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVEEKEG 50
>gi|392577844|gb|EIW70972.1| hypothetical protein TREMEDRAFT_67521 [Tremella mesenterica DSM
1558]
Length = 78
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+ + +L KF+D+ + + L GGR V+G L+GYD LNLV+D A E L G
Sbjct: 3 RASQPELKKFMDRKLYLHLQGGRAVSGILRGYDMFLNLVVDNAFEELGG 51
>gi|366990797|ref|XP_003675166.1| hypothetical protein NCAS_0B07110 [Naumovozyma castellii CBS
4309]
gi|342301030|emb|CCC68795.1| hypothetical protein NCAS_0B07110 [Naumovozyma castellii CBS
4309]
Length = 75
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 26/28 (92%)
Query: 57 GGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
GG+ V+GTLKGYDQL+NLVLD+ +E+L+
Sbjct: 2 GGKLVSGTLKGYDQLMNLVLDDTIEYLK 29
>gi|221120336|ref|XP_002162004.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Hydra
magnipapillata]
Length = 76
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + +KL R VTG L+G+D +NLV+D+ VE N I ++V
Sbjct: 3 KTNPPELKKYMDKRLHLKLNCNRSVTGILRGFDPFMNLVIDDTVENTSTQERNNIGMVV 61
>gi|391346676|ref|XP_003747595.1| PREDICTED: small nuclear ribonucleoprotein G-like [Metaseiulus
occidentalis]
Length = 76
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +L K++DK + ++L G R V+G L+G+D +N+VL+EA E ++G I + V
Sbjct: 3 KAHPPELKKYMDKSLSLRLNGSRVVSGILRGFDPFMNIVLEEAFEEVKGGQRTPIGMTV 61
>gi|300123719|emb|CBK24991.2| unnamed protein product [Blastocystis hominis]
Length = 77
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
KE ++LA ++ K V VKL G R V G L+GYDQ++N+VL++ E + N
Sbjct: 3 KEINVNLANYMGKVVTVKLNGNRIVEGVLRGYDQMMNIVLEDVYEVVNEN 52
>gi|302831688|ref|XP_002947409.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
gi|300267273|gb|EFJ51457.1| hypothetical protein VOLCADRAFT_87780 [Volvox carteri f.
nagariensis]
Length = 74
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L +F+DK + + L R V+GTL+G+DQ +N+VLD+ V+
Sbjct: 8 ELKRFMDKKLSIHLNANRHVSGTLRGFDQFMNVVLDQTVD 47
>gi|320592629|gb|EFX05059.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 107
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+D+ + +K GGR+V+G LKG+D LLN+VLD A E +R
Sbjct: 1 MDREIYIKFNGGREVSGVLKGFDPLLNMVLDNAQEKMR 38
>gi|407929252|gb|EKG22086.1| hypothetical protein MPH_00541 [Macrophomina phaseolina MS6]
Length = 81
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVE 46
>gi|68069273|ref|XP_676547.1| small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56496296|emb|CAH97122.1| small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 83
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG-NLYNGIFV 93
G+ D KF++K +Q+ L G R + G L+GYD +NLVLD +E + N+ GI V
Sbjct: 6 GKAGPASDFRKFMEKRLQIYLNGNRLIVGVLRGYDTFMNLVLDNTIEIKKDENIEIGIVV 65
Query: 94 I 94
I
Sbjct: 66 I 66
>gi|322368834|ref|ZP_08043401.1| snRNP-like protein [Haladaptatus paucihalophilus DX253]
gi|320551565|gb|EFW93212.1| snRNP-like protein [Haladaptatus paucihalophilus DX253]
Length = 60
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL-DEAVEFLRGN 86
MSGR VL+ + ++ V V+L GG + TGTL GYDQ +NLV+ DE +RG+
Sbjct: 1 MSGRPLDVLEAS--LNSAVTVQLKGGEEYTGTLTGYDQHMNLVIEDEDTTIIRGD 53
>gi|340520043|gb|EGR50280.1| predicted protein [Trichoderma reesei QM6a]
gi|358387525|gb|EHK25119.1| hypothetical protein TRIVIDRAFT_32934 [Trichoderma virens Gv29-8]
Length = 83
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVE 46
>gi|145329599|ref|NP_001077949.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|330252410|gb|AEC07504.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
Length = 67
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK +Q+KL R VTGTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 1 MDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE-VNGNDKTDIGMVV 48
>gi|46107748|ref|XP_380933.1| hypothetical protein FG00757.1 [Gibberella zeae PH-1]
gi|408399451|gb|EKJ78553.1| hypothetical protein FPSE_01277 [Fusarium pseudograminearum
CS3096]
Length = 84
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVE 46
>gi|399217705|emb|CCF74592.1| unnamed protein product [Babesia microti strain RI]
Length = 79
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 17/76 (22%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF---------- 82
M+G+ +DL +F++K + + L G R + G L+GYD +N+VLD A++
Sbjct: 1 MAGKTGPAVDLRRFMEKRLDIYLNGHRHIVGVLRGYDTFMNIVLDNALKIGDEKEELGTV 60
Query: 83 -LRGNLYNGIFVIVCF 97
LRGN IVC+
Sbjct: 61 VLRGN------SIVCW 70
>gi|198427430|ref|XP_002130422.1| PREDICTED: similar to small nuclear ribonucleoprotein G [Ciona
intestinalis]
Length = 89
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
K +L KF+DK + +KL GGR + G L+G+D +NLV+D+ +
Sbjct: 16 KAHPPELKKFMDKKLDLKLNGGRSIQGILRGFDPFMNLVIDDGI 59
>gi|58260010|ref|XP_567415.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229465|gb|AAW45898.1| hypothetical protein CNJ03360 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 71
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
A+F+D+ + + L GGRQ++G L+GYD LNLV+D A E L G
Sbjct: 3 AEFMDRRLFLHLQGGRQISGVLRGYDMFLNLVVDSAFEELGG 44
>gi|320591988|gb|EFX04427.1| small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 86
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLDEAVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDEAVE 46
>gi|71296893|gb|AAH35103.1| SNRPG protein [Homo sapiens]
gi|74177547|dbj|BAE43250.1| unnamed protein product [Mus musculus]
gi|149036609|gb|EDL91227.1| rCG56468, isoform CRA_a [Rattus norvegicus]
gi|149036612|gb|EDL91230.1| rCG56468, isoform CRA_a [Rattus norvegicus]
gi|149036613|gb|EDL91231.1| rCG56468, isoform CRA_a [Rattus norvegicus]
Length = 64
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 1 MDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 49
>gi|449267710|gb|EMC78623.1| Small nuclear ribonucleoprotein G, partial [Columba livia]
Length = 58
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
VKL GGR V G L+G+D +NLV+DE VE G N I ++V
Sbjct: 1 VKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGMVV 43
>gi|355561845|gb|EHH18477.1| hypothetical protein EGK_15086 [Macaca mulatta]
Length = 63
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 1 MDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 49
>gi|326936526|ref|XP_003214304.1| PREDICTED: small nuclear ribonucleoprotein G-like, partial
[Meleagris gallopavo]
Length = 60
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
VKL GGR V G L+G+D +NLV+DE VE G N I ++V
Sbjct: 3 VKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGMVV 45
>gi|429327915|gb|AFZ79675.1| small nuclear ribonucleoprotein G, putative [Babesia equi]
Length = 81
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
G K DL +F++K + V L G R V G L+GYD +N+VLD A+E
Sbjct: 3 GGGKAGSADLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALE 50
>gi|159471089|ref|XP_001693689.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
gi|158283192|gb|EDP08943.1| small nuclear ribonucleoprotein polypeptide G [Chlamydomonas
reinhardtii]
Length = 77
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L +F+DK + + L R V+GTL+G+DQ +NLVLD V+
Sbjct: 8 ELKRFMDKKLSITLNANRHVSGTLRGFDQFMNLVLDATVD 47
>gi|145517616|ref|XP_001444691.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412113|emb|CAK77294.1| unnamed protein product [Paramecium tetraurelia]
Length = 83
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
KE+++ L ++K V ++ GGRQV GTL +D LNLVLDE E
Sbjct: 6 KESIIKLQSHINKEVVIQFQGGRQVKGTLLSFDNQLNLVLDEVREL 51
>gi|410730333|ref|XP_003671346.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS
421]
gi|401780164|emb|CCD26103.2| hypothetical protein NDAI_0G03260 [Naumovozyma dairenensis CBS
421]
Length = 76
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +L K++DK + ++L G R++ G L+GYD LN+V+D+AVE
Sbjct: 3 STPELKKYMDKKILIQLNGSRKIAGILRGYDIFLNVVIDDAVE 45
>gi|302310596|ref|XP_453405.2| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|199425041|emb|CAH00501.2| KLLA0D07678p [Kluyveromyces lactis]
Length = 73
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLYNGIFVIV 95
T DL K++DK + ++L G R++ G L+GYD LNLVLD ++ F G + G +V
Sbjct: 2 TSPDLRKYMDKKLILQLNGNRKIIGILRGYDAFLNLVLDNPIQIFEEGEVQMGPQTVV 59
>gi|320164748|gb|EFW41647.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 77
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K +L KF+D+ V +KL G R+V+G L+G+D +N+VLDE E
Sbjct: 3 KPANPELKKFLDRRVILKLNGNRKVSGILRGFDPFMNVVLDETFE 47
>gi|396471648|ref|XP_003838919.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
gi|312215488|emb|CBX95440.1| similar to small nuclear ribonucleoprotein G [Leptosphaeria
maculans JN3]
Length = 84
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K V V+L G R+V G L+GYD LN+VLDEA+E
Sbjct: 7 ELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALE 46
>gi|300175124|emb|CBK20435.2| unnamed protein product [Blastocystis hominis]
Length = 82
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 55 LTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ GGR++ G LKG+D L+N+VLDEAVE++R
Sbjct: 1 MQGGREIVGILKGFDSLMNIVLDEAVEYMR 30
>gi|451850030|gb|EMD63333.1| hypothetical protein COCSADRAFT_38193 [Cochliobolus sativus
ND90Pr]
gi|452001852|gb|EMD94311.1| hypothetical protein COCHEDRAFT_1170230 [Cochliobolus
heterostrophus C5]
Length = 84
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K V V+L G R+V G L+GYD LN+VLDEA+E
Sbjct: 7 ELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALE 46
>gi|169602875|ref|XP_001794859.1| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
gi|160706278|gb|EAT88201.2| hypothetical protein SNOG_04441 [Phaeosphaeria nodorum SN15]
Length = 84
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K V V+L G R+V G L+GYD LN+VLDEA+E
Sbjct: 7 ELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDEALE 46
>gi|422294798|gb|EKU22098.1| U6 snRNA-associated Sm-like protein LSm7 [Nannochloropsis
gaditana CCMP526]
Length = 77
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 57 GGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
GGR+VTG L+G+DQL+NLVLDE+ E LR L
Sbjct: 2 GGREVTGILRGFDQLINLVLDESKETLRDPL 32
>gi|403222297|dbj|BAM40429.1| small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 82
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNLYNGIFVI 94
DL +F++K + V L G R V G L+GYD +N+VLD A+E + G + G+ V+
Sbjct: 12 DLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALEVVGEGQVELGVVVV 65
>gi|390336863|ref|XP_001199475.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Strongylocentrotus purpuratus]
Length = 90
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
L +V+ V V GRQ+ GTLKG+DQ +NL+LDE+ E + N
Sbjct: 5 LESYVNHTVSVITNDGRQIVGTLKGFDQTINLILDESHERVYSN 48
>gi|402083491|gb|EJT78509.1| sm snRNP core protein Smg1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 86
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK V V+L G R+V G ++GYD LN+VLDEA E
Sbjct: 7 ELKKYLDKKVFVQLNGSRKVVGVVRGYDVFLNIVLDEAFE 46
>gi|410077765|ref|XP_003956464.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS
2517]
gi|372463048|emb|CCF57329.1| hypothetical protein KAFR_0C03370 [Kazachstania africana CBS
2517]
Length = 76
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+ +L K++DK V +++ G R+V G L+GYD LN+VLD+A E + +
Sbjct: 3 STPELKKYMDKKVLLQINGSRKVAGILRGYDIFLNIVLDDAFELSKND 50
>gi|84994586|ref|XP_952015.1| small nuclear ribonucleoprotein [Theileria annulata strain
Ankara]
gi|65302176|emb|CAI74283.1| small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 82
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL +F++K + V L G R V G L+GYD +N+VLD A+E
Sbjct: 12 DLRRFMEKRLDVHLNGSRHVVGVLRGYDTFMNIVLDNALE 51
>gi|154300461|ref|XP_001550646.1| hypothetical protein BC1G_11054 [Botryotinia fuckeliana B05.10]
gi|347828363|emb|CCD44060.1| similar to small nuclear ribonucleoprotein g [Botryotinia
fuckeliana]
Length = 85
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKEG 50
>gi|340897533|gb|EGS17123.1| putative small nuclear ribonucleoprotein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 82
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELKKYLDKRLFVELNGSRRVIGVLRGYDVFLNIVLDDAVE 46
>gi|430813244|emb|CCJ29390.1| unnamed protein product [Pneumocystis jirovecii]
Length = 76
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+ +L K++DK V + L G R+V G L+GYD LN+VLDEA E G
Sbjct: 5 STPELKKYMDKKVFLMLNGSRKVIGVLRGYDVFLNIVLDEAFEEKEG 51
>gi|45199029|ref|NP_986058.1| AFR511Cp [Ashbya gossypii ATCC 10895]
gi|44985104|gb|AAS53882.1| AFR511Cp [Ashbya gossypii ATCC 10895]
gi|374109289|gb|AEY98195.1| FAFR511Cp [Ashbya gossypii FDAG1]
Length = 76
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGI 91
+ +L K++++ V ++L G R+V G L+GYD LN+VLD+AVE R +G+
Sbjct: 3 STPELKKYMERKVFLQLNGARKVVGVLRGYDLFLNVVLDDAVEITRTGGKHGL 55
>gi|388579558|gb|EIM19880.1| DUF21-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 625
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
+L K++DK V V L R+VTG L+G+D LNLVLD+A
Sbjct: 9 ELKKYMDKRVLVHLQANRKVTGQLRGFDLFLNLVLDDA 46
>gi|344303705|gb|EGW33954.1| hypothetical protein SPAPADRAFT_59353 [Spathaspora passalidarum
NRRL Y-27907]
Length = 80
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 37 KETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
KE LDL +F +D+ V +KL G R++ G L+GYD N+VL EA E++
Sbjct: 4 KEEPLDLIRFHLDEFVLIKLRGAREIKGKLQGYDSHCNMVLSEAEEYI 51
>gi|301097686|ref|XP_002897937.1| small nuclear ribonucleoprotein G [Phytophthora infestans T30-4]
gi|262106382|gb|EEY64434.1| small nuclear ribonucleoprotein G [Phytophthora infestans T30-4]
gi|348673260|gb|EGZ13079.1| hypothetical protein PHYSODRAFT_514215 [Phytophthora sojae]
Length = 64
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK + +KL G R+V+G L+G+DQ +N+ LDE VE + N I ++V
Sbjct: 1 MDKRLSLKLNGNRKVSGVLRGFDQFMNVTLDETVEEVSATESNRIGMVV 49
>gi|312385157|gb|EFR29724.1| hypothetical protein AND_23652 [Anopheles darlingi]
Length = 64
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK + +KL GGR V+G L+G+D +N+VLDE++E + N I ++V
Sbjct: 1 MDKRLSLKLNGGRVVSGILRGFDPFMNVVLDESIEECKDGTRNNIGMVV 49
>gi|260947516|ref|XP_002618055.1| hypothetical protein CLUG_01514 [Clavispora lusitaniae ATCC 42720]
gi|238847927|gb|EEQ37391.1| hypothetical protein CLUG_01514 [Clavispora lusitaniae ATCC 42720]
Length = 130
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 24 NLGFLKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
N + +++ ++E LDL ++ +D+ V VKL G R++ G L+GYD N+VL +A E
Sbjct: 39 NFILMSNIQTGAQQEEPLDLIRYQLDESVLVKLRGAREMKGKLQGYDSHCNMVLSDAQET 98
Query: 83 LRG 85
+ G
Sbjct: 99 IYG 101
>gi|255710607|ref|XP_002551587.1| KLTH0A02970p [Lachancea thermotolerans]
gi|238932964|emb|CAR21145.1| KLTH0A02970p [Lachancea thermotolerans CBS 6340]
Length = 76
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +L K++DK V ++L G R++ G L+G+D LN+VLD+AVE
Sbjct: 3 STPELKKYMDKKVYIQLNGSRKLVGVLRGFDIFLNVVLDDAVE 45
>gi|393246263|gb|EJD53772.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 100
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 31/38 (81%)
Query: 44 AKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
A+F+DK + V + GGR+V+GTL+G+D LNLVLD+A +
Sbjct: 33 AQFMDKKLFVHIQGGRKVSGTLRGFDIFLNLVLDDAQD 70
>gi|189203891|ref|XP_001938281.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|330924593|ref|XP_003300696.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
gi|187985380|gb|EDU50868.1| hypothetical protein PTRG_07949 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|311325030|gb|EFQ91212.1| hypothetical protein PTT_12029 [Pyrenophora teres f. teres 0-1]
Length = 84
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 33/44 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K+++K V V+L G R+V G L+GYD LN+VLD+A+E + G
Sbjct: 7 ELKKYLEKRVLVQLNGSRKVMGILRGYDVYLNIVLDDALEEVAG 50
>gi|213404670|ref|XP_002173107.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
gi|212001154|gb|EEB06814.1| small nuclear ribonucleoprotein [Schizosaccharomyces japonicus
yFS275]
Length = 77
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K DL K++DK V V+L G R+V G L+GYD LN+V+++A E
Sbjct: 3 KAAAPDLKKYLDKQVFVQLNGSRKVYGVLRGYDIFLNIVVEDAYE 47
>gi|296421463|ref|XP_002840284.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636499|emb|CAZ84475.1| unnamed protein product [Tuber melanosporum]
Length = 76
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+A+E
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGILRGYDVFLNIVLDDAIE 46
>gi|366991963|ref|XP_003675747.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS
4309]
gi|342301612|emb|CCC69383.1| hypothetical protein NCAS_0C03930 [Naumovozyma castellii CBS
4309]
Length = 76
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +L K++DK + ++L G R+V G L+GYD LN+V+D+AVE
Sbjct: 3 STPELKKYMDKKILLQLNGSRKVAGILRGYDIFLNVVVDDAVE 45
>gi|156040265|ref|XP_001587119.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980]
gi|154696205|gb|EDN95943.1| hypothetical protein SS1G_12149 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 84
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVEEKEG 50
>gi|171694560|ref|XP_001912204.1| hypothetical protein [Podospora anserina S mat+]
gi|170947522|emb|CAP59683.1| unnamed protein product [Podospora anserina S mat+]
Length = 85
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+V+D+AVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVMDDAVE 46
>gi|14192871|gb|AAK55776.1|AC079038_10 Putative small nuclear ribonucleoprotein G [Oryza sativa]
Length = 94
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 15/76 (19%)
Query: 35 GRKETVLDLAKFVDKGVQ--------------VKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
R DL K++DK +Q VKL R V GTL+G+DQ +NLV+D V
Sbjct: 2 SRSGQPPDLKKYMDKKLQTLMVYSFTLFSILPVKLNANRVVIGTLRGFDQFMNLVVDNTV 61
Query: 81 EFLRGNLYNGIFVIVC 96
E + GN N I ++V
Sbjct: 62 E-VNGNEKNDIGMVVI 76
>gi|308807046|ref|XP_003080834.1| putative snRNP splicing factor-related (ISS) [Ostreococcus tauri]
gi|116059295|emb|CAL55002.1| putative snRNP splicing factor-related (ISS) [Ostreococcus tauri]
Length = 112
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 26/27 (96%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTG 63
K+TVLDLA+ +D+GV+VKL+GGR+VTG
Sbjct: 30 KDTVLDLARCIDRGVRVKLSGGREVTG 56
>gi|150866473|ref|XP_001386093.2| hypothetical protein PICST_63621 [Scheffersomyces stipitis CBS
6054]
gi|149387729|gb|ABN68064.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 88
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 28 LKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+ +++ +++ LDL +F +D+ V VKL G R++ G L+GYD N+VL EA E++
Sbjct: 1 MSTIRTESQQQEPLDLIRFQLDEFVLVKLRGAREMKGRLQGYDSHCNMVLSEAEEYI 57
>gi|402871713|ref|XP_003899798.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Papio anubis]
Length = 96
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +VD+ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENYVDRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|226291004|gb|EEH46432.1| small nuclear ribonucleoprotein SmG [Paracoccidioides
brasiliensis Pb18]
Length = 79
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K+++K + V++ G R+V G L+GYD +N+VLDEAVE G
Sbjct: 7 ELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVEEKSG 50
>gi|367030948|ref|XP_003664757.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila
ATCC 42464]
gi|347012028|gb|AEO59512.1| hypothetical protein MYCTH_2119714 [Myceliophthora thermophila
ATCC 42464]
Length = 83
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVE 46
>gi|261198058|ref|XP_002625431.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239595394|gb|EEQ77975.1| predicted protein [Ajellomyces dermatitidis SLH14081]
gi|239607755|gb|EEQ84742.1| predicted protein [Ajellomyces dermatitidis ER-3]
gi|327354601|gb|EGE83458.1| small nuclear ribonucleoprotein SmG [Ajellomyces dermatitidis
ATCC 18188]
Length = 78
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K+++K + V+L G R+V G L+GYD +N+VLDEAVE G
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDEAVEEKNG 50
>gi|358057697|dbj|GAA96462.1| hypothetical protein E5Q_03129 [Mixia osmundae IAM 14324]
Length = 79
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K + +L K++DK + V L G R+++G L+G+D LNLVLDEA + G+
Sbjct: 3 KASQPELKKYMDKRIFVNLQGNRKISGVLRGFDIFLNLVLDEAKDETPGS 52
>gi|367000792|ref|XP_003685131.1| hypothetical protein TPHA_0D00530 [Tetrapisispora phaffii CBS
4417]
gi|357523429|emb|CCE62697.1| hypothetical protein TPHA_0D00530 [Tetrapisispora phaffii CBS
4417]
Length = 76
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + +KL G R++ G L+GYD LN+V+D+AVE
Sbjct: 6 ELKKYLEKKIVIKLNGERRIAGVLRGYDVFLNVVVDDAVE 45
>gi|326427331|gb|EGD72901.1| small nuclear ribonucleoprotein G [Salpingoeca sp. ATCC 50818]
Length = 76
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
GR + +L +F+DK +++KL R+V+G L+G+D +N+V+D+ VE
Sbjct: 2 GRPQAP-ELKRFLDKKLELKLNANRKVSGILRGFDPFMNIVMDQTVEH 48
>gi|303276466|ref|XP_003057527.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461879|gb|EEH59172.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 77
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+++DK +++KL G R V G L+G+DQ LNLVLDE V+
Sbjct: 5 RYMDKKLRLKLNGNRGVVGVLRGFDQFLNLVLDECVD 41
>gi|308810487|ref|XP_003082552.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
gi|116061021|emb|CAL56409.1| putative small nuclear ribonucleoprotein E (ISS) [Ostreococcus
tauri]
Length = 101
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
+++DK ++++L G R VTG L+G+DQ LNLVLD++
Sbjct: 29 RYMDKKLRLRLNGNRSVTGILRGFDQFLNLVLDDST 64
>gi|367051545|ref|XP_003656151.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL
8126]
gi|347003416|gb|AEO69815.1| hypothetical protein THITE_2120569 [Thielavia terrestris NRRL
8126]
Length = 83
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVE 46
>gi|259146173|emb|CAY79432.1| Smx2p [Saccharomyces cerevisiae EC1118]
Length = 77
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+ +L K++DK + + + G R+V G L+GYD LN+VLD+A+E
Sbjct: 3 STPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI 46
>gi|440640051|gb|ELR09970.1| small nuclear ribonucleoprotein G [Geomyces destructans 20631-21]
Length = 83
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVE 46
>gi|156085737|ref|XP_001610278.1| small nuclear ribonucleoprotein G [Babesia bovis T2Bo]
gi|154797530|gb|EDO06710.1| small nuclear ribonucleoprotein G, putative [Babesia bovis]
Length = 80
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
DL ++++K + V LTG R V G L+GYD +N+VLD A++
Sbjct: 10 DLRRYMEKRLDVHLTGSRHVVGVLRGYDTFMNVVLDNALQI 50
>gi|151940745|gb|EDN59132.1| Sm G [Saccharomyces cerevisiae YJM789]
gi|190406555|gb|EDV09822.1| small nuclear ribonucleoprotein G [Saccharomyces cerevisiae
RM11-1a]
gi|256268877|gb|EEU04227.1| Smx2p [Saccharomyces cerevisiae JAY291]
gi|349577899|dbj|GAA23066.1| K7_Smx2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299654|gb|EIW10747.1| Smx2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 77
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+ +L K++DK + + + G R+V G L+GYD LN+VLD+A+E
Sbjct: 3 STPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI 46
>gi|440907817|gb|ELR57914.1| hypothetical protein M91_09610 [Bos grunniens mutus]
Length = 247
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
VKL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 190 VKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 232
>gi|390478353|ref|XP_002761603.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7 [Callithrix
jacchus]
Length = 103
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
K +KE++LDL+K++DK ++VK GGR+ G L+G+ L ++ + +V
Sbjct: 4 KEKKKKESILDLSKYIDKTIRVKFQGGREAGGLLRGFTMLARMLPESSV 52
>gi|307111678|gb|EFN59912.1| hypothetical protein CHLNCDRAFT_132948 [Chlorella variabilis]
Length = 101
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVCFLLV 100
LA++VD V V GR + GTL+GYDQ NL+LDE E + + NG+ +V L V
Sbjct: 10 LAQYVDTTVSVITNDGRTIVGTLRGYDQATNLILDECHERVYSS-KNGVEQLVLGLYV 66
>gi|14318502|ref|NP_116636.1| Smx2p [Saccharomyces cerevisiae S288c]
gi|730760|sp|P40204.1|RUXG_YEAST RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|499706|gb|AAB63977.1| small nuclear ribonucleoprotein E [Saccharomyces cerevisiae]
gi|559938|emb|CAA86353.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45270816|gb|AAS56789.1| YFL017W-A [Saccharomyces cerevisiae]
gi|285811877|tpg|DAA12422.1| TPA: Smx2p [Saccharomyces cerevisiae S288c]
Length = 77
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+ +L K++DK + + + G R+V G L+GYD LN+VLD+A+E
Sbjct: 3 STPELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI 46
>gi|395841395|ref|XP_003793525.1| PREDICTED: uncharacterized protein LOC100954411 [Otolemur
garnettii]
Length = 186
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
VKL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 129 VKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 171
>gi|340059633|emb|CCC54026.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma vivax Y486]
Length = 81
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV-EFLRGNLYNG 90
K+ + +L F++K V +KL GGR V+G L+G DQ +++VL +AV E RG+ G
Sbjct: 4 KKGIPNLNHFMEKRVMLKLQGGRSVSGELRGVDQFMSVVLHDAVDESQRGSDSEG 58
>gi|116182940|ref|XP_001221319.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88186395|gb|EAQ93863.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 83
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVLGVLRGYDVFLNIVLDDAVE 46
>gi|154283627|ref|XP_001542609.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|150410789|gb|EDN06177.1| small nuclear ribonucleoprotein SmG [Ajellomyces capsulatus NAm1]
gi|225561938|gb|EEH10218.1| hypothetical protein HCBG_01863 [Ajellomyces capsulatus G186AR]
gi|240275552|gb|EER39066.1| hypothetical protein HCDG_07010 [Ajellomyces capsulatus H143]
gi|325091383|gb|EGC44693.1| hypothetical protein HCEG_03908 [Ajellomyces capsulatus H88]
Length = 78
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + V+L G R+V G L+GYD +N+V+DEAVE
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVMDEAVE 46
>gi|119188491|ref|XP_001244852.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|320031840|gb|EFW13798.1| small nuclear ribonucleoprotein SmG [Coccidioides posadasii str.
Silveira]
gi|392867766|gb|EAS33463.2| small nuclear ribonucleoprotein SmG [Coccidioides immitis RS]
Length = 78
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + +++ G R+V G L+GYD +N+VLDEA+E
Sbjct: 7 ELKKYMEKRLLIQINGNRRVIGVLRGYDVFMNIVLDEAIE 46
>gi|361126108|gb|EHK98124.1| putative small nuclear ribonucleoprotein G [Glarea lozoyensis
74030]
Length = 85
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVE 46
>gi|156839006|ref|XP_001643199.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113798|gb|EDO15341.1| hypothetical protein Kpol_1011p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 76
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 33/46 (71%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+ +L K+++K V ++L G R+V G L+GYD LN+V+D+A+E +
Sbjct: 3 STPELKKYMEKKVLLQLNGSRKVAGILRGYDIFLNVVIDDAIEISK 48
>gi|378754992|gb|EHY65020.1| hypothetical protein NERG_02076 [Nematocida sp. 1 ERTm2]
Length = 114
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL 76
++ + + +++ V DL K+V K V++ GG +VTG L GYDQLLN+VL
Sbjct: 1 MQEEEKASKRDQVFDLEKYVGKKVRICFFGGIEVTGCLLGYDQLLNIVL 49
>gi|85090916|ref|XP_958647.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336273960|ref|XP_003351734.1| hypothetical protein SMAC_00278 [Sordaria macrospora k-hell]
gi|28920025|gb|EAA29411.1| hypothetical protein NCU09880 [Neurospora crassa OR74A]
gi|336463997|gb|EGO52237.1| hypothetical protein NEUTE1DRAFT_90311 [Neurospora tetrasperma
FGSC 2508]
gi|350296078|gb|EGZ77055.1| LSM-domain-containing protein [Neurospora tetrasperma FGSC 2509]
gi|380096013|emb|CCC06060.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 85
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAVE 46
>gi|19113214|ref|NP_596422.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe 972h-]
gi|6094213|sp|O74966.1|RUXG_SCHPO RecName: Full=Small nuclear ribonucleoprotein G; Short=snRNP-G;
AltName: Full=Sm protein G; Short=Sm-G; Short=SmG
gi|3169092|emb|CAA19285.1| U4/U6 x U5 tri-snRNP complex Sm snRNP core protein Smg1
[Schizosaccharomyces pombe]
Length = 77
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K DL K++D+ V V+L G R+V G L+GYD LN+VL++++E
Sbjct: 3 KAGAPDLKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLEDSIE 47
>gi|281212625|gb|EFA86785.1| LSM domain-containing protein [Polysphondylium pallidum PN500]
Length = 82
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K DL K +DK + VKL G R V G L+G+D +N+VL + VE
Sbjct: 5 KPQDPDLTKLLDKKMNVKLNGNRTVIGILRGFDSFMNIVLKDTVE 49
>gi|406865394|gb|EKD18436.1| LSM domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 83
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELKKYLDKRLFVQLNGTRKVIGILRGYDVFLNIVLDDAVE 46
>gi|387592745|gb|EIJ87769.1| hypothetical protein NEQG_01841 [Nematocida parisii ERTm3]
gi|387595371|gb|EIJ92995.1| hypothetical protein NEPG_01950 [Nematocida parisii ERTm1]
Length = 114
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD 77
++ + + +++ V DL K++ K +++ GG +VTG L GYDQLLNLVL+
Sbjct: 1 MQEDEKTSKRDQVFDLEKYLGKDIRICFFGGIEVTGCLLGYDQLLNLVLE 50
>gi|395818964|ref|XP_003782876.1| PREDICTED: uncharacterized protein LOC100942869 [Otolemur
garnettii]
Length = 450
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK + +KL GGR V G +G+D +NLV+DE VE N I ++V
Sbjct: 1 MDKKLSLKLNGGRHVQGISRGFDSSVNLVIDECVEMATSGQQNTIRMVV 49
>gi|380800039|gb|AFE71895.1| U6 snRNA-associated Sm-like protein LSm7, partial [Macaca
mulatta]
Length = 80
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 52 QVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+VK GGR+ +G LKG+D LLNLVLD +E++R
Sbjct: 1 RVKFQGGREASGILKGFDPLLNLVLDGTIEYMR 33
>gi|119719338|ref|YP_919833.1| like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
gi|119524458|gb|ABL77830.1| Like-Sm ribonucleoprotein, core [Thermofilum pendens Hrk 5]
Length = 73
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
T+ LA+ ++K V VKL GGR++ G LK YD LNLVL+ A E +RG
Sbjct: 5 TISVLAESLEKNVLVKLKGGREIRGQLKSYDYHLNLVLENA-EEIRG 50
>gi|225679289|gb|EEH17573.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
Length = 78
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + V++ G R+V G L+GYD +N+VLDEAVE
Sbjct: 7 ELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVE 46
>gi|344231234|gb|EGV63116.1| LSM-domain-containing protein [Candida tenuis ATCC 10573]
Length = 88
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 28 LKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+ ++ ++E LDL ++ +D+ V VKL G R++ G L+GYD N+VL +A E++
Sbjct: 1 MADVQPQQKQEEPLDLIRYQLDETVLVKLRGAREMKGKLQGYDSHCNMVLSDATEYI 57
>gi|328872445|gb|EGG20812.1| LSM domain-containing protein [Dictyostelium fasciculatum]
Length = 125
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K DL K +D+ + V+L G R V G L+G+D +N+VL + VE + + I ++V
Sbjct: 5 KPQDPDLTKLLDRKMNVRLNGNRTVVGVLRGFDTFMNIVLKDTVEIISPTESHNIGMVV 63
>gi|281346695|gb|EFB22279.1| hypothetical protein PANDA_002886 [Ailuropoda melanoleuca]
Length = 50
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
VKL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 1 VKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 43
>gi|295665420|ref|XP_002793261.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp.
'lutzii' Pb01]
gi|226278175|gb|EEH33741.1| small nuclear ribonucleoprotein SmG [Paracoccidioides sp.
'lutzii' Pb01]
Length = 78
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + V++ G R+V G L+GYD +N+VLDEAVE
Sbjct: 7 ELKKYMEKRLFVQINGNRKVIGILRGYDVFMNIVLDEAVE 46
>gi|157104024|ref|XP_001648223.1| small nuclear ribonucleoprotein, core, putative [Aedes aegypti]
gi|108880439|gb|EAT44664.1| AAEL003985-PA [Aedes aegypti]
Length = 162
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 20 RVSFNLGFLKSLKMSGRK----ETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLV 75
R G L++L ++ ET+ L +V+ V + GR GTLKG+DQ +N++
Sbjct: 44 RTQHEQGHLQALSNRNQRYDIHETMSGLESYVNTTVSIITADGRNFVGTLKGFDQTINII 103
Query: 76 LDEAVE 81
LDE+ E
Sbjct: 104 LDESHE 109
>gi|303323787|ref|XP_003071885.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240111587|gb|EER29740.1| LSM domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 67
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + +++ G R+V G L+GYD +N+VLDEA+E
Sbjct: 7 ELKKYMEKRLLIQINGNRRVIGVLRGYDVFMNIVLDEAIE 46
>gi|401625929|gb|EJS43908.1| smx2p [Saccharomyces arboricola H-6]
Length = 77
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
+ +L K++DK + + + G R++ G L+GYD LN+VLD+A+E N N
Sbjct: 3 STPELKKYMDKKILLNVNGSRKIAGILRGYDIFLNVVLDDAMEINGENAAN 53
>gi|315046146|ref|XP_003172448.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|327305055|ref|XP_003237219.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|311342834|gb|EFR02037.1| small nuclear ribonucleoprotein SmG [Arthroderma gypseum CBS
118893]
gi|326460217|gb|EGD85670.1| small nuclear ribonucleoprotein SmG [Trichophyton rubrum CBS
118892]
gi|326472004|gb|EGD96013.1| small nuclear ribonucleoprotein SmG [Trichophyton tonsurans CBS
112818]
gi|326477131|gb|EGE01141.1| small nuclear ribonucleoprotein SmG [Trichophyton equinum CBS
127.97]
Length = 78
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K+++K + V+L G R+V G L+GYD +N+VLD+AVE G
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGVLRGYDVFMNIVLDDAVEEKNG 50
>gi|50421915|ref|XP_459516.1| DEHA2E04510p [Debaryomyces hansenii CBS767]
gi|49655184|emb|CAG87742.1| DEHA2E04510p [Debaryomyces hansenii CBS767]
Length = 88
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 28 LKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+ +++ +++ LDL ++ +D+ V VKL G R++ G L+GYD N++L +AVE++
Sbjct: 1 MSTVRTEQQQQEPLDLVRYQLDELVLVKLRGAREMKGKLQGYDSHCNMILSDAVEYI 57
>gi|400602043|gb|EJP69668.1| LSM domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 83
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L G R+V G L+GYD LN+VLD+A E G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEETEG 50
>gi|148676870|gb|EDL08817.1| mCG2658 [Mus musculus]
Length = 64
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK + +KL GGR V G L G+D +NLV DE VE N I ++V
Sbjct: 1 MDKKLSLKLNGGRHVQGILLGFDPFMNLVTDECVEMATSGQQNNISMVV 49
>gi|254567409|ref|XP_002490815.1| Small nuclear ribonucleoprotein G [Komagataella pastoris GS115]
gi|238030611|emb|CAY68535.1| Small nuclear ribonucleoprotein G [Komagataella pastoris GS115]
gi|328351196|emb|CCA37596.1| U6 snRNA-associated Sm-like protein LSm6 [Komagataella pastoris
CBS 7435]
Length = 77
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVCFL 98
+ +L K++ + VK+ GRQ+ G L GYD LNL LD+ V+ N V C L
Sbjct: 4 STPELKKYLHHRISVKINAGRQIEGLLTGYDVFLNLTLDDCVQVNPSNRAEDTPVGSCVL 63
>gi|149638763|ref|XP_001516404.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ornithorhynchus anatinus]
Length = 96
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L F+++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENFINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|346325864|gb|EGX95460.1| small nuclear ribonucleoprotein SmG [Cordyceps militaris CM01]
Length = 85
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K++DK + V+L G R+V G L+GYD LN+VLD+A E G
Sbjct: 7 ELKKYLDKRLFVQLNGSRKVIGVLRGYDVFLNIVLDDAFEEREG 50
>gi|342883326|gb|EGU83840.1| hypothetical protein FOXB_05622 [Fusarium oxysporum Fo5176]
Length = 93
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQ--LLNLVLDEAVEFLRGNLYNGIFVI 94
K+ LDL ++DK + V+L G R+V G L+GYD+ LN+VLDEAVE G I ++
Sbjct: 9 KKASLDLFCYLDKRLFVQLNGSRKVIGILRGYDKQVFLNIVLDEAVEEKDGGEKERIGMV 68
Query: 95 V 95
V
Sbjct: 69 V 69
>gi|317036310|ref|XP_001398084.2| small nuclear ribonucleoprotein G [Aspergillus niger CBS 513.88]
gi|358372686|dbj|GAA89288.1| small nuclear ribonucleoprotein SmG [Aspergillus kawachii IFO
4308]
Length = 78
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+L K+++K V +L G R+V G L+GYD +N+VLDEA E +G I +IV
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIGMIV 60
>gi|378732523|gb|EHY58982.1| small nuclear ribonucleoprotein G [Exophiala dermatitidis
NIH/UT8656]
Length = 80
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + V+L G R+V G L+GYD LN+VLD+AVE
Sbjct: 7 ELRKYMEKRLFVQLNGNRKVIGVLRGYDVFLNIVLDDAVE 46
>gi|363727561|ref|XP_003640398.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Gallus gallus]
Length = 80
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|70983548|ref|XP_747301.1| small nuclear ribonucleoprotein SmG [Aspergillus fumigatus Af293]
gi|66844927|gb|EAL85263.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus Af293]
gi|159123693|gb|EDP48812.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
fumigatus A1163]
Length = 78
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K+++K V +L G R+V G L+GYD +N+VLDEA E +G
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKQG 50
>gi|448090794|ref|XP_004197162.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|448095234|ref|XP_004198193.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|359378584|emb|CCE84843.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
gi|359379615|emb|CCE83812.1| Piso0_004401 [Millerozyma farinosa CBS 7064]
Length = 90
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 28 LKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+ + + G + DL ++ +D+ V VKL G R++ G L+GYD N+VL +AVE++
Sbjct: 1 MSNTDVDGNPQEPFDLVRYQLDELVLVKLRGAREMKGRLQGYDSHCNMVLSDAVEYI 57
>gi|302768987|ref|XP_002967913.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
gi|300164651|gb|EFJ31260.1| hypothetical protein SELMODRAFT_227744 [Selaginella
moellendorffii]
Length = 81
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
DL K++D + +KL R V G L+G+DQ +NLVLD +E + GN I ++V
Sbjct: 9 DLKKYMDLKLMIKLNANRVVVGVLRGFDQFMNLVLDNTME-ISGNERTEIGMVV 61
>gi|148698069|gb|EDL30016.1| mCG121012 [Mus musculus]
Length = 90
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 49 KGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+ + +KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 29 RKLSLKLNGGRHVQGILQGFDPFMNLVIDECVEMATSGQQNNIGMVV 75
>gi|67522076|ref|XP_659099.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|40744652|gb|EAA63808.1| hypothetical protein AN1495.2 [Aspergillus nidulans FGSC A4]
gi|259486817|tpe|CBF84982.1| TPA: small nuclear ribonucleoprotein SmG, putative
(AFU_orthologue; AFUA_8G04960) [Aspergillus nidulans
FGSC A4]
Length = 78
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+L K+++K V +L G R+V G L+GYD +N+VLDEA E G I +IV
Sbjct: 7 ELKKYMEKRVFCELNGNRKVIGVLRGYDVFMNIVLDEAFEEKPGGEKVAIGMIV 60
>gi|119484532|ref|XP_001262045.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya
fischeri NRRL 181]
gi|121719811|ref|XP_001276604.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
clavatus NRRL 1]
gi|119404816|gb|EAW15178.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus
clavatus NRRL 1]
gi|119410201|gb|EAW20148.1| small nuclear ribonucleoprotein SmG, putative [Neosartorya
fischeri NRRL 181]
Length = 78
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K+++K V +L G R+V G L+GYD +N+VLDEA E +G
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQG 50
>gi|413919650|gb|AFW59582.1| hypothetical protein ZEAMMB73_572847 [Zea mays]
Length = 71
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 22/24 (91%)
Query: 61 VTGTLKGYDQLLNLVLDEAVEFLR 84
+TGTLKGYDQLLNLVLDEAVE R
Sbjct: 2 LTGTLKGYDQLLNLVLDEAVENER 25
>gi|115491153|ref|XP_001210204.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197064|gb|EAU38764.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 78
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K+++K V +L G R+V G L+GYD +N+VLDEA E +G
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFEEKQG 50
>gi|109139334|gb|ABE96774.2| U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
Length = 126
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 35 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 73
>gi|109458413|ref|XP_001063547.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
gi|392337649|ref|XP_003753311.1| PREDICTED: small nuclear ribonucleoprotein G-like [Rattus
norvegicus]
Length = 76
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
K +D + +KL GGR+V G L+G+D +NLV+DE VE N V+V
Sbjct: 11 KVMDGKLSLKLDGGRRVRGVLRGFDPFMNLVVDECVEMGNSGQQNNSGVVV 61
>gi|402864615|ref|XP_003896552.1| PREDICTED: ankyrin repeat and KH domain-containing protein
mask-like [Papio anubis]
Length = 504
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 249 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 287
>gi|167518686|ref|XP_001743683.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777645|gb|EDQ91261.1| predicted protein [Monosiga brevicollis MX1]
Length = 93
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 33 MSGRK-ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
M GR E LDL + +++ V VK+ G RQ+ GTL YDQ +N+VL VE L
Sbjct: 1 MDGRSVEEPLDLVRLSLEEKVLVKMRGDRQLEGTLHAYDQHMNMVLSNVVETL 53
>gi|260814225|ref|XP_002601816.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
gi|229287118|gb|EEN57828.1| hypothetical protein BRAFLDRAFT_279155 [Branchiostoma floridae]
Length = 96
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+K V V + GR + GTLKG+DQ NL+LDE+ E
Sbjct: 5 LEDYVNKTVSVITSDGRMIVGTLKGFDQTTNLILDESHE 43
>gi|238483149|ref|XP_002372813.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
gi|317139686|ref|XP_001817686.2| small nuclear ribonucleoprotein G [Aspergillus oryzae RIB40]
gi|220700863|gb|EED57201.1| small nuclear ribonucleoprotein SmG, putative [Aspergillus flavus
NRRL3357]
Length = 78
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+L K+++K V +L G R+V G L+GYD +N+VLDEA E +G
Sbjct: 7 ELKKYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQG 50
>gi|429965212|gb|ELA47209.1| hypothetical protein VCUG_01309 [Vavraia culicis 'floridensis']
Length = 71
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+K V DL ++DK V VKL GGR+V G LK YD NL+L ++ N
Sbjct: 6 KKFLVDDLNDYIDKAVIVKLIGGREVKGFLKSYDNNFNLILKGGHDWEYSN 56
>gi|294945142|ref|XP_002784569.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
gi|239897680|gb|EER16365.1| Small nuclear ribonucleoprotein G, putative [Perkinsus marinus
ATCC 50983]
Length = 59
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 54 KLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
KL G R V G L+GYDQ +NLVLD AVE +
Sbjct: 1 KLNGNRHVVGVLRGYDQFMNLVLDNAVELV 30
>gi|414867201|tpg|DAA45758.1| TPA: small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK +Q+K+ R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 1 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNTVE-VNGNDKTDIGMVV 48
>gi|225716368|gb|ACO14030.1| U6 snRNA-associated Sm-like protein LSm8 [Esox lucius]
Length = 96
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYINRTVAVVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|395839861|ref|XP_003792793.1| PREDICTED: small nuclear ribonucleoprotein G-like [Otolemur
garnettii]
Length = 101
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGI 91
K +L K +DK + +KL+ GR V G L+ +D +NLV+DE VE N I
Sbjct: 30 KADPPELKKIIDKKLWLKLSSGRYVQGILQRFDSFMNLVIDECVEMATSGQQNNI 84
>gi|366997500|ref|XP_003678512.1| hypothetical protein NCAS_0J01950 [Naumovozyma castellii CBS
4309]
gi|342304384|emb|CCC72174.1| hypothetical protein NCAS_0J01950 [Naumovozyma castellii CBS
4309]
Length = 84
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
ET LDL K +D+ V VKL G R +TGTL+ +D N+VL +AVE +
Sbjct: 4 ETPLDLLKLNLDEKVYVKLRGARSLTGTLQAFDSHCNIVLSDAVETI 50
>gi|212541212|ref|XP_002150761.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
gi|210068060|gb|EEA22152.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
marneffei ATCC 18224]
Length = 77
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + V+L G R+V G L+GYD +N+VLD+AVE
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDDAVE 46
>gi|327272990|ref|XP_003221266.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 67
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|440491888|gb|ELQ74493.1| Small Nuclear ribonucleoprotein splicing factor
[Trachipleistophora hominis]
Length = 71
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+K + DL +++D+ + VKL GGR+V G LK YD NLVL ++ N
Sbjct: 6 KKFLIEDLNEYIDRTIIVKLIGGREVKGLLKSYDNNFNLVLKGGADWEYNN 56
>gi|242799446|ref|XP_002483380.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
gi|218716725|gb|EED16146.1| small nuclear ribonucleoprotein SmG, putative [Talaromyces
stipitatus ATCC 10500]
Length = 77
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K+++K + V+L G R+V G L+GYD +N+VLD+AVE
Sbjct: 7 ELKKYMEKRLFVQLNGNRKVIGILRGYDVFMNIVLDDAVE 46
>gi|393232628|gb|EJD40208.1| LSM-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 95
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +VD V + LT GR + GTL+GYDQ N+VL E+VE
Sbjct: 4 LQGYVDHRVYLVLTDGRSIIGTLRGYDQKSNIVLSESVE 42
>gi|7706425|ref|NP_057284.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Homo
sapiens]
gi|19527156|ref|NP_598700.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Mus
musculus]
gi|77736425|ref|NP_001029912.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos taurus]
gi|157819253|ref|NP_001100055.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Rattus
norvegicus]
gi|197102128|ref|NP_001125239.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Pongo
abelii]
gi|388453491|ref|NP_001253526.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|57096120|ref|XP_532529.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 1 [Canis lupus familiaris]
gi|126340603|ref|XP_001364736.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Monodelphis domestica]
gi|194209825|ref|XP_001501036.2| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Equus caballus]
gi|291391224|ref|XP_002712161.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8 [Oryctolagus
cuniculus]
gi|296210100|ref|XP_002751829.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Callithrix jacchus]
gi|301764070|ref|XP_002917457.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Ailuropoda melanoleuca]
gi|311275562|ref|XP_003134801.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|332224269|ref|XP_003261290.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Nomascus leucogenys]
gi|332869198|ref|XP_001141412.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan troglodytes]
gi|344270905|ref|XP_003407282.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Loxodonta africana]
gi|345783317|ref|XP_003432400.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Canis lupus familiaris]
gi|348578839|ref|XP_003475189.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cavia porcellus]
gi|350595285|ref|XP_003484077.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sus scrofa]
gi|395539266|ref|XP_003771593.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Sarcophilus harrisii]
gi|395738892|ref|XP_003777165.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Pongo abelii]
gi|395833654|ref|XP_003789838.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Otolemur garnettii]
gi|397474452|ref|XP_003808693.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Pan paniscus]
gi|410952710|ref|XP_003983022.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
gi|426227909|ref|XP_004008057.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Ovis aries]
gi|426357668|ref|XP_004046156.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Gorilla gorilla gorilla]
gi|10720071|sp|O95777.3|NAA38_HUMAN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|52783125|sp|Q6ZWM4.3|NAA38_MOUSE RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|75055136|sp|Q5RCP3.3|NAA38_PONAB RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|115312132|sp|Q3ZCE0.3|NAA38_BOVIN RecName: Full=N-alpha-acetyltransferase 38, NatC auxiliary
subunit; AltName: Full=U6 snRNA-associated Sm-like
protein LSm8
gi|5919157|gb|AAD56232.1|AF182294_1 U6 snRNA-associated Sm-like protein LSm8 [Homo sapiens]
gi|4309884|gb|AAD15542.1| similar to Schizosaccharomyces pombe splicing factor; similar to
PID:3395591 [Homo sapiens]
gi|12803805|gb|AAH02742.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|18044123|gb|AAH19458.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|18490261|gb|AAH22440.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|26353716|dbj|BAC40488.1| unnamed protein product [Mus musculus]
gi|51095108|gb|EAL24351.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Homo sapiens]
gi|55727417|emb|CAH90464.1| hypothetical protein [Pongo abelii]
gi|73586551|gb|AAI02500.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Bos taurus]
gi|74198481|dbj|BAE39723.1| unnamed protein product [Mus musculus]
gi|90080802|dbj|BAE89882.1| unnamed protein product [Macaca fascicularis]
gi|119603943|gb|EAW83537.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gi|148681914|gb|EDL13861.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Mus musculus]
gi|149065053|gb|EDM15129.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
gi|187469565|gb|AAI67094.1| LSM8 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Rattus norvegicus]
gi|189065154|dbj|BAG34877.1| unnamed protein product [Homo sapiens]
gi|296488327|tpg|DAA30440.1| TPA: U6 snRNA-associated Sm-like protein LSm8 [Bos taurus]
gi|355747958|gb|EHH52455.1| hypothetical protein EGM_12900 [Macaca fascicularis]
gi|380813674|gb|AFE78711.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|383419121|gb|AFH32774.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Macaca
mulatta]
gi|410208824|gb|JAA01631.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410256304|gb|JAA16119.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410288376|gb|JAA22788.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|410353357|gb|JAA43282.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Pan
troglodytes]
gi|431911774|gb|ELK13922.1| U6 snRNA-associated Sm-like protein LSm8 [Pteropus alecto]
gi|432103158|gb|ELK30417.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Myotis
davidii]
gi|440909990|gb|ELR59832.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Bos
grunniens mutus]
Length = 96
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|118082191|ref|XP_416009.2| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
isoform 2 [Gallus gallus]
gi|326911334|ref|XP_003202015.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Meleagris gallopavo]
Length = 96
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|67468165|ref|XP_650141.1| small nuclear ribonucleo protein G [Entamoeba histolytica
HM-1:IMSS]
gi|56466712|gb|EAL44755.1| small nuclear ribonucleo protein G, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407041678|gb|EKE40885.1| LSM domain containing protein [Entamoeba nuttalli P19]
gi|449707868|gb|EMD47446.1| small nuclear ribonucleo protein G, putative [Entamoeba
histolytica KU27]
Length = 81
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L +++K + VK+ G R + G L GYD+ +NLVLDEA +
Sbjct: 7 ELKHYLEKRILVKIHGKRSIIGVLSGYDEYMNLVLDEAYD 46
>gi|403256938|ref|XP_003921099.1| PREDICTED: ankyrin repeat domain-containing protein 7 [Saimiri
boliviensis boliviensis]
Length = 260
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|363748558|ref|XP_003644497.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888129|gb|AET37680.1| hypothetical protein Ecym_1454 [Eremothecium cymbalariae
DBVPG#7215]
Length = 76
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 32/43 (74%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +L K++++ + ++L G R+V G L+GYD LN+VLD+A+E
Sbjct: 3 STPELKKYMERKLFIQLNGSRKVVGVLRGYDVFLNVVLDDALE 45
>gi|88604287|ref|YP_504465.1| like-Sm ribonucleoprotein, core [Methanospirillum hungatei JF-1]
gi|88189749|gb|ABD42746.1| Small nuclear ribonucleoprotein, LSM family [Methanospirillum
hungatei JF-1]
Length = 80
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
++ + M+ R +LD + V + L GGR++ G L+GYD +NLVLD+A E ++G
Sbjct: 1 MQGIDMTKRPMDILDQV-LNRQPVLISLKGGREIKGVLQGYDVHMNLVLDKAEEIVQG 57
>gi|328770153|gb|EGF80195.1| hypothetical protein BATDEDRAFT_11709 [Batrachochytrium
dendrobatidis JAM81]
Length = 70
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 31/41 (75%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+ +++D+ + V+L G R+VTG L+GYD +N+VL++A E L
Sbjct: 1 MDRYMDRKLFVQLNGNRKVTGVLRGYDPFMNIVLEDASEEL 41
>gi|148666747|gb|EDK99163.1| mCG130514, isoform CRA_c [Mus musculus]
gi|149036611|gb|EDL91229.1| rCG56468, isoform CRA_c [Rattus norvegicus]
Length = 58
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+KL GGR V G L+G+D +NLV+DE VE N I ++V
Sbjct: 1 MKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVV 43
>gi|242002636|ref|XP_002435961.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|215499297|gb|EEC08791.1| small nuclear ribonucleoprotein (snRNP) splicing factor [Ixodes
scapularis]
gi|442754057|gb|JAA69188.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
gi|442754059|gb|JAA69189.1| Putative small nuclear ribonucleoprotein snrnp splicing factor
[Ixodes ricinus]
Length = 96
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHE 43
>gi|145353525|ref|XP_001421061.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581297|gb|ABO99354.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
+DK ++++L G R V GTL+G+DQ LN+VLD+A
Sbjct: 1 MDKKLRLRLNGNRNVVGTLRGFDQFLNVVLDDAT 34
>gi|323454582|gb|EGB10452.1| hypothetical protein AURANDRAFT_9439, partial [Aureococcus
anophagefferens]
Length = 62
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 31/40 (77%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DL ++++K + +K R++ GTL+GYDQ +NLV+++A+E
Sbjct: 6 DLKRYMEKRLLIKARARRKLVGTLRGYDQFMNLVVEDAIE 45
>gi|209736546|gb|ACI69142.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|209738386|gb|ACI70062.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|355706179|gb|AES02561.1| LSM8-like protein, U6 small nuclear RNA associated [Mustela
putorius furo]
Length = 99
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 9 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 47
>gi|449481053|ref|XP_004177250.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Taeniopygia guttata]
Length = 96
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LETYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|213513122|ref|NP_001135313.1| N-alpha-acetyltransferase 38, NatC auxiliary subunit [Salmo
salar]
gi|209731702|gb|ACI66720.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732172|gb|ACI66955.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|209732248|gb|ACI66993.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
gi|303665717|gb|ADM16200.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|74025842|ref|XP_829487.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei TREU927]
gi|9837172|gb|AAG00460.1|AF280392_1 Sm-G [Trypanosoma brucei]
gi|70834873|gb|EAN80375.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261335490|emb|CBH18484.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma brucei
gambiense DAL972]
Length = 82
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 34/45 (75%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K+ + +L F++K V+VKLT GR ++G L+G D+ +++VL +AV+
Sbjct: 4 KKRIANLNHFMEKRVKVKLTSGRSISGELRGVDEFMSIVLYDAVD 48
>gi|348521232|ref|XP_003448130.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oreochromis niloticus]
gi|410918466|ref|XP_003972706.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Takifugu rubripes]
gi|432943853|ref|XP_004083300.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Oryzias latipes]
Length = 96
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|224164763|ref|XP_002189792.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Taeniopygia guttata]
Length = 96
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LETYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|449018428|dbj|BAM81830.1| similar to U6 snRNA-associated Sm-like protein LSm7
[Cyanidioschyzon merolae strain 10D]
Length = 204
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+ L+++ + + VQV L GGR V G L G+D L NLVL++AVE+
Sbjct: 68 SALEVSPWSGQTVQVLLVGGRCVIGKLVGWDTLANLVLEDAVEY 111
>gi|66811318|ref|XP_639367.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
gi|74854860|sp|Q54RX0.1|RUXG_DICDI RecName: Full=Probable small nuclear ribonucleoprotein G;
Short=snRNP-G; AltName: Full=Sm protein G; Short=Sm-G;
Short=SmG
gi|60468000|gb|EAL66011.1| LSM domain-containing protein [Dictyostelium discoideum AX4]
Length = 85
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K+ DL K +DK + +KL G R V G L+G+D +N+ L + VE
Sbjct: 5 KQADPDLTKLLDKKLAIKLNGNRTVHGILRGFDTFMNIALKDTVE 49
>gi|209731758|gb|ACI66748.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|448513188|ref|XP_003866888.1| Smx2 protein [Candida orthopsilosis Co 90-125]
gi|380351226|emb|CCG21450.1| Smx2 protein [Candida orthopsilosis Co 90-125]
Length = 90
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
T +L ++DK V V+L G R+V G L+GYD LN+ + +A+E
Sbjct: 4 TEPELKAYLDKKVSVQLNGSRKVIGILRGYDIFLNVTISDALE 46
>gi|448122563|ref|XP_004204478.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|448124870|ref|XP_004205036.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358249669|emb|CCE72735.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
gi|358350017|emb|CCE73296.1| Piso0_000329 [Millerozyma farinosa CBS 7064]
Length = 74
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 30/43 (69%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +L +++K + ++L G R+V GTL+GYD LN+ L EA+E
Sbjct: 3 SAPELKNYLNKKISIQLNGTRKVIGTLRGYDIFLNVTLSEALE 45
>gi|401426935|ref|XP_003877951.1| putative small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494198|emb|CBZ29495.1| putative small nuclear ribonucleoprotein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 81
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 36/54 (66%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNG 90
+T+ +L F++K + VK+ GGR ++G L+G D+ +++VL +A++ R +G
Sbjct: 4 HKTLPNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETRNAAVSG 57
>gi|389631277|ref|XP_003713291.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|351645624|gb|EHA53484.1| sm snRNP core protein Smg1 [Magnaporthe oryzae 70-15]
gi|440466674|gb|ELQ35928.1| sm snRNP core protein Smg1 [Magnaporthe oryzae Y34]
gi|440476979|gb|ELQ58129.1| sm snRNP core protein Smg1 [Magnaporthe oryzae P131]
Length = 88
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK V V+L G R+V G ++GYD LN+VL++A E
Sbjct: 7 ELKKYLDKKVFVQLNGSRKVVGVVRGYDVFLNIVLEDAFE 46
>gi|47026939|gb|AAT08690.1| small nuclear ribonucleoprotein polypeptide G [Hyacinthus
orientalis]
Length = 96
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 52 QVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
Q+KL R V GTL+G+DQ +NLV+D +E + GN N I ++V
Sbjct: 35 QIKLNANRVVVGTLRGFDQFMNLVIDNTME-VNGNDKNDIGMVV 77
>gi|307354786|ref|YP_003895837.1| small nuclear riboprotein-like protein [Methanoplanus
petrolearius DSM 11571]
gi|307158019|gb|ADN37399.1| Like-Sm ribonucleoprotein core [Methanoplanus petrolearius DSM
11571]
Length = 75
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN 89
M+ R +LD A K V V L GGR++ G L+GYD +NLVL+ A E + G + N
Sbjct: 1 MTKRPLEILDQA-LNQKPVIVSLKGGREIRGILQGYDVHMNLVLENAEEEINGVIKN 56
>gi|195657879|gb|ACG48407.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 67
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+DK +Q+K+ R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 1 MDKKLQIKMNANRVVIGTLRGFDQFMNLVVDNIVE-VNGNDKTDIGMVV 48
>gi|225708270|gb|ACO09981.1| U6 snRNA-associated Sm-like protein LSm8 [Osmerus mordax]
Length = 96
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LETYINRTVAIITSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|147904722|ref|NP_001084715.1| N(alpha)-acetyltransferase 38, NatC auxiliary subunit [Xenopus
laevis]
gi|46329906|gb|AAH68881.1| MGC82379 protein [Xenopus laevis]
Length = 96
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LENYINRTVAVITADGRMIVGTLKGFDQTINLILDESHE 43
>gi|303276468|ref|XP_003057528.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461880|gb|EEH59173.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 71
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+DK +++KL G R V G L+G+DQ LNLVLDE V+
Sbjct: 1 MDKKLRLKLNGNRGVLGVLRGFDQFLNLVLDECVD 35
>gi|412986570|emb|CCO14996.1| predicted protein [Bathycoccus prasinos]
Length = 72
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
+DK +++KL G R V G L+G+DQ LNLVLDE V
Sbjct: 1 MDKKLKLKLNGNRGVIGILRGFDQFLNLVLDECV 34
>gi|403170432|ref|XP_003329769.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375168717|gb|EFP85350.2| small nuclear ribonucleoprotein G [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 78
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + + L G R+++G L+G+D LNLVLDEA E
Sbjct: 8 ELKKYMDKRLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQE 47
>gi|281350538|gb|EFB26122.1| hypothetical protein PANDA_000104 [Ailuropoda melanoleuca]
Length = 57
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
KF+DK + +KL GGR + G L+ ++ +NLV+DE E N ++V
Sbjct: 2 KFMDKKLSLKLNGGRHIQGILQEFNPFMNLVIDECTEMATSEQQNNTGMVV 52
>gi|397773764|ref|YP_006541310.1| Like-Sm ribonucleoprotein core [Natrinema sp. J7-2]
gi|397682857|gb|AFO57234.1| Like-Sm ribonucleoprotein core [Natrinema sp. J7-2]
Length = 135
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 3 AFVEINAVSFFIVCRSARVSFNLGFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVT 62
+ EI + I C S V L+MSGR VL+ A D+ V V+L G +
Sbjct: 40 SSTEIGLRTGTIKCPSPAV---------LRMSGRPLDVLE-ASLGDR-VTVRLKSGDEYV 88
Query: 63 GTLKGYDQLLNLVLDEAVEFLRGNL 87
G L GYDQ +NLVL++ + + GN+
Sbjct: 89 GDLAGYDQHMNLVLEDVMIPVEGNV 113
>gi|321263328|ref|XP_003196382.1| hypothetical protein CGB_J0080C [Cryptococcus gattii WM276]
gi|317462858|gb|ADV24595.1| hypothetical protein CNJ03360 [Cryptococcus gattii WM276]
Length = 66
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
+D+ + + L GGRQV+G L+GYD LNLV+D A E L G
Sbjct: 1 MDRRLFLHLQGGRQVSGVLRGYDMFLNLVVDNAFEELGG 39
>gi|328853199|gb|EGG02339.1| hypothetical protein MELLADRAFT_75479 [Melampsora larici-populina
98AG31]
Length = 78
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L K++DK + + L G R+++G L+G+D LNLVLDEA E
Sbjct: 8 ELKKYMDKRLFLNLQGNRKLSGVLRGFDIFLNLVLDEAQE 47
>gi|294495046|ref|YP_003541539.1| Small nuclear ribonucleoprotein, LSM family [Methanohalophilus
mahii DSM 5219]
gi|292666045|gb|ADE35894.1| Small nuclear ribonucleoprotein, LSM family [Methanohalophilus
mahii DSM 5219]
Length = 72
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIF 92
M R +L+ A ++ V V+L G R+ GTL+GYD +NLVLDEA E G + I
Sbjct: 1 MGNRPLDILNNA--LNTAVIVRLKGAREFRGTLQGYDVHMNLVLDEAEEIKEGEIIRKIG 58
Query: 93 VIVC 96
+V
Sbjct: 59 SVVV 62
>gi|346470191|gb|AEO34940.1| hypothetical protein [Amblyomma maculatum]
gi|346470193|gb|AEO34941.1| hypothetical protein [Amblyomma maculatum]
gi|427786053|gb|JAA58478.1| Putative small nuclear ribonucleoprotein splicing factor
[Rhipicephalus pulchellus]
Length = 96
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LEGYVNHTVSIITADGRHIVGTLKGFDQTINLILDESHE 43
>gi|392341147|ref|XP_003754265.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38,
NatC auxiliary subunit-like [Rattus norvegicus]
gi|392348918|ref|XP_003750235.1| PREDICTED: LOW QUALITY PROTEIN: N-alpha-acetyltransferase 38,
NatC auxiliary subunit-like [Rattus norvegicus]
Length = 132
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
L ++++ V V ++ R + GTLKG+DQ +NL LDE+ E+L
Sbjct: 40 LENYINRIVDVIISDVRTIVGTLKGFDQTINLTLDESHEWL 80
>gi|330827552|ref|XP_003291838.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
gi|325077961|gb|EGC31640.1| hypothetical protein DICPUDRAFT_39635 [Dictyostelium purpureum]
Length = 78
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K+ DL + +DK + VKL G R V G L+G+D +N+ L + VE
Sbjct: 5 KQIDPDLTRLLDKKLNVKLNGNRTVQGILRGFDTFMNIALKDTVE 49
>gi|326666504|ref|XP_694374.3| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Danio rerio]
Length = 96
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++ + V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYIHRTVAIVTSDGRMIVGTLKGFDQAINLILDESHE 43
>gi|328350067|emb|CCA36467.1| U6 snRNA-associated Sm-like protein LSm6 [Komagataella pastoris CBS
7435]
Length = 199
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 21 VSFNLGFLKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
SF F +S MS + L++ K +D+ V VKL G R++ G L YD NLVL +A
Sbjct: 104 TSFTHHFHRSTAMSVSEP--LNMIKLCLDEKVYVKLRGAREIVGKLHAYDNHCNLVLGDA 161
Query: 80 VEFL 83
VE +
Sbjct: 162 VETI 165
>gi|209733618|gb|ACI67678.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYINRTVATVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|333449461|gb|AEF33416.1| U6 snRNA-associated Sm-like protein LSm8 [Crassostrea ariakensis]
Length = 96
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V++ V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYVNRTVSIVTADGRIIVGTLKGFDQTINLILDESHE 43
>gi|374629344|ref|ZP_09701729.1| Small nuclear ribonucleoprotein, LSM family [Methanoplanus
limicola DSM 2279]
gi|373907457|gb|EHQ35561.1| Small nuclear ribonucleoprotein, LSM family [Methanoplanus
limicola DSM 2279]
Length = 75
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
M+ R +LD A K V V L GGR++ G L+GYD +NLVL+ A E + G
Sbjct: 1 MTKRPLEILDKA-LNQKPVIVSLKGGREIRGVLQGYDVHMNLVLENAEEEING 52
>gi|367012788|ref|XP_003680894.1| hypothetical protein TDEL_0D00990 [Torulaspora delbrueckii]
gi|359748554|emb|CCE91683.1| hypothetical protein TDEL_0D00990 [Torulaspora delbrueckii]
Length = 85
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
ET LDL K +D+ V VKL G R++ GTL+ +D N+VL +AVE
Sbjct: 4 ETPLDLLKLNLDERVYVKLRGARELIGTLQAFDSHCNIVLSDAVE 48
>gi|209731736|gb|ACI66737.1| U6 snRNA-associated Sm-like protein LSm8 [Salmo salar]
Length = 96
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L + ++ V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYTNRTVAIVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|126460744|ref|YP_001057022.1| LSM family small nuclear ribonucleoprotein [Pyrobaculum
calidifontis JCM 11548]
gi|126250465|gb|ABO09556.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
calidifontis JCM 11548]
Length = 80
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLY 88
L + K V VKL ++ G LK +DQ +NL+LD+A E + GN+Y
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILKAFDQHVNLLLDDAEEIIDGNVY 61
>gi|21226441|ref|NP_632363.1| small nuclear ribonucleoprotein [Methanosarcina mazei Go1]
gi|452208952|ref|YP_007489066.1| snRNP Sm-like protein [Methanosarcina mazei Tuc01]
gi|30173324|sp|Q8PZZ9.1|RUXX_METMA RecName: Full=Putative snRNP Sm-like protein
gi|20904702|gb|AAM30035.1| putative snRNP Sm-like protein [Methanosarcina mazei Go1]
gi|452098854|gb|AGF95794.1| snRNP Sm-like protein [Methanosarcina mazei Tuc01]
Length = 72
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
M+ R +L+ A +D V V+L G R+ G LKGYD +NLVLD A E G
Sbjct: 1 MANRPLDILNNA--LDTPVIVRLKGAREFRGELKGYDIHMNLVLDNAEELREG 51
>gi|281354384|gb|EFB29968.1| hypothetical protein PANDA_005106 [Ailuropoda melanoleuca]
Length = 54
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+L F+ K + +KL GGR V G L+G+D ++LV++E VE
Sbjct: 8 ELKAFMGKKLSLKLNGGRHVQGILQGFDPFMDLVIEECVEM 48
>gi|354546754|emb|CCE43486.1| hypothetical protein CPAR2_211300 [Candida parapsilosis]
Length = 73
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
T +L ++DK V V+L G R+V G L+GYD LN+ + +A+E
Sbjct: 4 TEPELKAYLDKKVSVQLNGSRKVIGILRGYDIFLNVTISDALE 46
>gi|255727663|ref|XP_002548757.1| hypothetical protein CTRG_03054 [Candida tropicalis MYA-3404]
gi|240133073|gb|EER32629.1| hypothetical protein CTRG_03054 [Candida tropicalis MYA-3404]
Length = 92
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+ LDL +F +D+ V VKL G R++ G L+GYD N+VL +A EF+
Sbjct: 12 QQPLDLIRFQLDEYVLVKLRGARELKGKLQGYDSHCNMVLSDAQEFI 58
>gi|146096397|ref|XP_001467793.1| putative small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|157873845|ref|XP_001685423.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|398020732|ref|XP_003863529.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
gi|68128495|emb|CAJ08627.1| putative small nuclear ribonucleoprotein [Leishmania major strain
Friedlin]
gi|134072159|emb|CAM70860.1| putative small nuclear ribonucleoprotein [Leishmania infantum
JPCM5]
gi|322501762|emb|CBZ36844.1| small nuclear ribonucleoprotein, putative [Leishmania donovani]
Length = 81
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 34/48 (70%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+T+ +L F++K + VK+ GGR ++G L+G D+ +++VL +A++ R
Sbjct: 4 HKTLPNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHDAMDETR 51
>gi|291238793|ref|XP_002739308.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm8-like
[Saccoglossus kowalevskii]
Length = 96
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +++ + V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LEGYINHTISVVTSDGRMIVGTLKGFDQTINLILDESHE 43
>gi|410080239|ref|XP_003957700.1| hypothetical protein KAFR_0E04140 [Kazachstania africana CBS
2517]
gi|372464286|emb|CCF58565.1| hypothetical protein KAFR_0E04140 [Kazachstania africana CBS
2517]
Length = 85
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+T LDL K +D+ V VKL G R +TGTL+ +D N+VL +AVE +
Sbjct: 3 DTPLDLLKLNLDETVYVKLRGARALTGTLQAFDSHCNIVLSDAVETI 49
>gi|402469099|gb|EJW04157.1| hypothetical protein EDEG_01552 [Edhazardia aedis USNM 41457]
Length = 90
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL 76
+K+ + DL ++++K + VKL GG+++ G L G+D + NLVL
Sbjct: 5 KKQLIFDLNQYMNKIIAVKLVGGKEIVGKLSGFDNICNLVL 45
>gi|109077418|ref|XP_001087356.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary subunit
[Macaca mulatta]
Length = 96
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V++ V V + GR + GTLKG+DQ +NL+L+E+ E
Sbjct: 5 LENYVNRTVAVITSDGRMIVGTLKGFDQTINLILNESHE 43
>gi|134083643|emb|CAK47035.1| unnamed protein product [Aspergillus niger]
Length = 105
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 36 RKETVLDLA---KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIF 92
+K T ++A ++++K V +L G R+V G L+GYD +N+VLDEA E +G I
Sbjct: 9 KKSTEANIAVFQQYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQGGEKVAIG 68
Query: 93 VIV 95
+IV
Sbjct: 69 MIV 71
>gi|440294421|gb|ELP87438.1| snrnp sm protein, putative [Entamoeba invadens IP1]
Length = 79
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 13/63 (20%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE------------FLR 84
E +DL K +D+ V VKL G RQ+ G L+ +DQ LNLVL E E ++R
Sbjct: 7 EEPIDLVKLSLDEVVLVKLRGNRQLKGKLRAFDQHLNLVLTEVTETYNSVSRDFPVLYIR 66
Query: 85 GNL 87
G+L
Sbjct: 67 GDL 69
>gi|73670936|ref|YP_306951.1| small nuclear ribonucleoprotein [Methanosarcina barkeri str.
Fusaro]
gi|121724584|sp|Q465S1.1|RUXX_METBF RecName: Full=Putative snRNP Sm-like protein
gi|72398098|gb|AAZ72371.1| Small nuclear ribonucleoprotein, LSM family [Methanosarcina
barkeri str. Fusaro]
Length = 72
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
M+ R +L+ A +D V V+L G R+ G LKGYD +NLVLD A E G
Sbjct: 1 MANRPLDILNNA--LDTPVIVRLKGAREFRGELKGYDIHMNLVLDNAEELREG 51
>gi|429216595|ref|YP_007174585.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM
15908]
gi|429133124|gb|AFZ70136.1| small nuclear ribonucleoprotein [Caldisphaera lagunensis DSM
15908]
Length = 79
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+A +++ V VK+ G R+V G L YDQ LNL+L++A E
Sbjct: 15 MADYLNSSVLVKMKGNREVKGILTSYDQHLNLILEKAEEL 54
>gi|116783050|gb|ABK22776.1| unknown [Picea sitchensis]
gi|116791884|gb|ABK26147.1| unknown [Picea sitchensis]
gi|148908711|gb|ABR17463.1| unknown [Picea sitchensis]
Length = 98
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKGYDQ NL++DE+ E
Sbjct: 7 LEDLVDETISVITNDGRNIVGILKGYDQATNLIMDESHE 45
>gi|355560937|gb|EHH17623.1| hypothetical protein EGK_14070 [Macaca mulatta]
Length = 96
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V + GR + GTLKG+DQ +NL+L+E+ E
Sbjct: 5 LENYINRTVAVITSDGRMIVGTLKGFDQTINLILNESHE 43
>gi|119872589|ref|YP_930596.1| like-Sm ribonucleoprotein, core [Pyrobaculum islandicum DSM 4184]
gi|119673997|gb|ABL88253.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
islandicum DSM 4184]
Length = 80
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYN-GIFVI 94
L + K V VKL ++ G L+ +DQ +NL+LD+A E + GN+Y G VI
Sbjct: 16 LQDAIGKQVLVKLRDSHEIRGILRSFDQHVNLLLDDAEEIIDGNVYKRGTIVI 68
>gi|20092011|ref|NP_618086.1| small nuclear ribonucleoprotein [Methanosarcina acetivorans C2A]
gi|30173335|sp|Q8TL47.1|RUXX_METAC RecName: Full=Putative snRNP Sm-like protein
gi|19917220|gb|AAM06566.1| Sm protein [Methanosarcina acetivorans C2A]
Length = 72
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
M+ R +L+ A +D V V+L G R+ G LKGYD +NLVLD A E G
Sbjct: 1 MANRPLDILNNA--LDTPVIVRLKGAREFRGELKGYDIHMNLVLDNAEELRDG 51
>gi|302772304|ref|XP_002969570.1| hypothetical protein SELMODRAFT_146440 [Selaginella
moellendorffii]
gi|302774851|ref|XP_002970842.1| hypothetical protein SELMODRAFT_94071 [Selaginella
moellendorffii]
gi|300161553|gb|EFJ28168.1| hypothetical protein SELMODRAFT_94071 [Selaginella
moellendorffii]
gi|300163046|gb|EFJ29658.1| hypothetical protein SELMODRAFT_146440 [Selaginella
moellendorffii]
Length = 127
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLY 88
LA +DK + V L GR++ GTL+ +DQ NLVL++AVE + G+LY
Sbjct: 14 LADNLDKKLLVILRDGRKLVGTLRSFDQFANLVLEKAVERIIVGDLY 60
>gi|156551834|ref|XP_001604291.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Nasonia vitripennis]
Length = 96
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + + GR GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHE 43
>gi|330835854|ref|YP_004410582.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
gi|329567993|gb|AEB96098.1| like-Sm ribonucleoprotein, core [Metallosphaera cuprina Ar-4]
Length = 75
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
LA+ V V VKL G ++V G LK YDQ +NLVL ++VE N
Sbjct: 9 LAESVGSLVLVKLKGNKEVRGYLKSYDQHMNLVLSDSVEIQNNN 52
>gi|154149642|ref|YP_001403260.1| like-Sm ribonucleoprotein, core [Methanoregula boonei 6A8]
gi|153998194|gb|ABS54617.1| Like-Sm ribonucleoprotein, core [Methanoregula boonei 6A8]
Length = 76
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
M+ R +LDL + V V L GGR++ G L+GYD +NLVLD+A E G +
Sbjct: 1 MTKRPLDILDLV-LNRQPVIVSLKGGREIRGVLQGYDVHMNLVLDKAEETENGQV 54
>gi|332024909|gb|EGI65097.1| U6 snRNA-associated Sm-like protein LSm8 [Acromyrmex echinatior]
Length = 96
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + + GR GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LESYVNHTVSIITSDGRNFIGTLKGFDQTINLILDESHE 43
>gi|171184523|ref|YP_001793442.1| like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
gi|170933735|gb|ACB38996.1| Like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
Length = 80
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLY 88
L + K V VKL ++ G L+ +DQ +NL+LD+A E + GN+Y
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLDDAEEIIDGNVY 61
>gi|254579134|ref|XP_002495553.1| ZYRO0B14102p [Zygosaccharomyces rouxii]
gi|238938443|emb|CAR26620.1| ZYRO0B14102p [Zygosaccharomyces rouxii]
Length = 85
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ LDL K +D+ V VKL G R++TGTL+ +D N+VL +AVE
Sbjct: 4 DAPLDLLKLNLDERVYVKLRGARELTGTLQAFDSHCNIVLSDAVE 48
>gi|58258887|ref|XP_566856.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus neoformans
var. neoformans JEC21]
gi|134107025|ref|XP_777825.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260523|gb|EAL23178.1| hypothetical protein CNBA5220 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222993|gb|AAW41037.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 95
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +VD VQV L GR + G LKGYD NL+L ++VE
Sbjct: 4 IESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVE 42
>gi|321249860|ref|XP_003191600.1| u6 snRNA-associated sm-like protein lsm8 [Cryptococcus gattii
WM276]
gi|317458067|gb|ADV19813.1| u6 snRNA-associated sm-like protein lsm8, putative [Cryptococcus
gattii WM276]
Length = 95
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +VD VQV L GR + G LKGYD NL+L ++VE
Sbjct: 4 IESYVDHTVQVILQDGRVIVGKLKGYDPRTNLILSDSVE 42
>gi|315425372|dbj|BAJ47038.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426552|dbj|BAJ48182.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|315426610|dbj|BAJ48238.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
gi|343485302|dbj|BAJ50956.1| small nuclear ribonucleoprotein [Candidatus Caldiarchaeum
subterraneum]
Length = 74
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
L+K V V V+L G+ + G LKGYDQ +N+VL++ E + N N + IV
Sbjct: 10 LSKSVGSTVLVRLRNGKVLRGLLKGYDQHMNIVLEDTDELIDENTQNKLGTIVV 63
>gi|147921633|ref|YP_684550.1| small nuclear ribonucleoprotein [Methanocella arvoryzae MRE50]
gi|121685694|sp|Q0W8R9.1|RUXX_UNCMA RecName: Full=Putative snRNP Sm-like protein
gi|110619946|emb|CAJ35224.1| putative small nuclear ribonucleoprotein (snRNP) Sm-like protein
[Methanocella arvoryzae MRE50]
Length = 72
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
MS R VL+ A ++ V V+L GGR+ G L+GYD +NLVLD A E
Sbjct: 1 MSQRPLDVLNEA--LNSPVIVRLKGGREFRGELQGYDMHMNLVLDNAEEL 48
>gi|308162403|gb|EFO64802.1| Small nuclear ribonucleoprotein Sm D2, putative [Giardia lamblia
P15]
Length = 83
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 29/57 (50%)
Query: 30 SLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
S K S D A + K V V+L GR +TG LK YD+ LNLV EA E N
Sbjct: 2 SNKASDSPYMFFDEALALRKPVLVQLRSGRFITGVLKAYDRHLNLVFSEATETWEEN 58
>gi|126654168|ref|XP_001388399.1| small nuclear ribonucleoprotein [Cryptosporidium parvum Iowa II]
gi|126117492|gb|EAZ51592.1| small nuclear ribonucleoprotein, putative [Cryptosporidium parvum
Iowa II]
Length = 62
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
VKL G RQ+ G+L+GYD +NLVL+ E L
Sbjct: 4 VKLNGNRQIIGSLRGYDNFMNLVLENTTEVL 34
>gi|401624580|gb|EJS42636.1| lsm3p [Saccharomyces arboricola H-6]
Length = 89
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
ET LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE +
Sbjct: 2 ETPLDLLKLNLDERVYIKLRGARSLVGTLQAFDSHCNIVLSDAVETI 48
>gi|405117913|gb|AFR92688.1| hypothetical protein CNAG_00557 [Cryptococcus neoformans var.
grubii H99]
Length = 95
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +VD VQV L GR + G LKGYD NL+L ++VE
Sbjct: 4 IESYVDHTVQVILQDGRIIVGKLKGYDPRTNLILSDSVE 42
>gi|307203833|gb|EFN82769.1| U6 snRNA-associated Sm-like protein LSm8 [Harpegnathos saltator]
Length = 96
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V V + GR GTLKG+DQ +N++LDE+ E
Sbjct: 5 LESYVNHTVSVITSDGRNFIGTLKGFDQTINIILDESHE 43
>gi|198428544|ref|XP_002121997.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm8
[Ciona intestinalis]
Length = 96
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L V++ V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 5 LEPLVNRIVSIVTADGRMIVGTLKGFDQTVNLILDESHE 43
>gi|119569838|gb|EAW49453.1| hCG2041295 [Homo sapiens]
Length = 107
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGI 91
+KL GGR V G L+G+D NLV+DE VE + N I
Sbjct: 6 LKLNGGRHVKGILQGFDHFTNLVIDECVEMATSDQQNKI 44
>gi|170785183|pdb|3BW1|A Chain A, Crystal Structure Of Homomeric Yeast Lsm3 Exhibiting
Novel Octameric Ring Organisation
gi|170785184|pdb|3BW1|B Chain B, Crystal Structure Of Homomeric Yeast Lsm3 Exhibiting
Novel Octameric Ring Organisation
Length = 96
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
ET LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE +
Sbjct: 9 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETI 55
>gi|398366287|ref|NP_013543.3| Lsm3p [Saccharomyces cerevisiae S288c]
gi|12230246|sp|P57743.1|LSM3_YEAST RecName: Full=U6 snRNA-associated Sm-like protein LSm3; AltName:
Full=SmX4 protein
gi|151940954|gb|EDN59336.1| snRNP protein [Saccharomyces cerevisiae YJM789]
gi|190405474|gb|EDV08741.1| snRNP protein [Saccharomyces cerevisiae RM11-1a]
gi|256271118|gb|EEU06213.1| Lsm3p [Saccharomyces cerevisiae JAY291]
gi|259148415|emb|CAY81662.1| Lsm3p [Saccharomyces cerevisiae EC1118]
gi|285813843|tpg|DAA09739.1| TPA: Lsm3p [Saccharomyces cerevisiae S288c]
gi|349580131|dbj|GAA25292.1| K7_Lsm3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297940|gb|EIW09039.1| Lsm3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 89
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
ET LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE +
Sbjct: 2 ETPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETI 48
>gi|149235353|ref|XP_001523555.1| hypothetical protein LELG_05401 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452964|gb|EDK47220.1| hypothetical protein LELG_05401 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 90
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+ LDL +F +D V VKL G R++ G L+GYD N+VL +A E + G+
Sbjct: 12 QEPLDLIRFQLDDYVVVKLRGARELYGKLQGYDSHCNMVLSDATETIYGD 61
>gi|218197373|gb|EEC79800.1| hypothetical protein OsI_21233 [Oryza sativa Indica Group]
Length = 136
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV-CFLL 99
L VD+ + V GR + GTL+G+DQ N++LDE+ E +Y+ +V+V C LL
Sbjct: 8 LESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE----RVYSTRYVLVNCDLL 61
>gi|126465841|ref|YP_001040950.1| LSM family small nuclear ribonucleoprotein [Staphylothermus
marinus F1]
gi|126014664|gb|ABN70042.1| Small nuclear ribonucleoprotein, LSM family [Staphylothermus
marinus F1]
Length = 75
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
V +KL G R+V G LK YDQ LN+VLD+A E
Sbjct: 17 VLIKLKGEREVRGKLKSYDQHLNIVLDDAEEI 48
>gi|222632782|gb|EEE64914.1| hypothetical protein OsJ_19774 [Oryza sativa Japonica Group]
Length = 136
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV-CFLL 99
L VD+ + V GR + GTL+G+DQ N++LDE+ E +Y+ +V+V C LL
Sbjct: 8 LESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE----RVYSTRYVLVNCDLL 61
>gi|241951220|ref|XP_002418332.1| small nuclear ribonucleoprotein G (snRNP-G), putative [Candida
dubliniensis CD36]
gi|223641671|emb|CAX43632.1| small nuclear ribonucleoprotein G (snRNP-G), putative [Candida
dubliniensis CD36]
Length = 74
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L ++DK + ++L G R++ G L+GYD LN+ L +A+E
Sbjct: 6 ELKSYMDKKLSIQLNGSRKIIGILRGYDIFLNITLTDALE 45
>gi|301610947|ref|XP_002935003.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like, partial [Xenopus (Silurana) tropicalis]
Length = 89
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 27/36 (75%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
++++ V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 1 YLNRTVAVITSDGRMIVGTLKGFDQTINLILDESHE 36
>gi|365991154|ref|XP_003672406.1| hypothetical protein NDAI_0J02710 [Naumovozyma dairenensis CBS
421]
gi|343771181|emb|CCD27163.1| hypothetical protein NDAI_0J02710 [Naumovozyma dairenensis CBS
421]
Length = 85
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
ET LDL K +D+ V VKL G R + GTL+ +D N+VL +A+E +
Sbjct: 4 ETPLDLLKLNLDEQVYVKLRGARSLVGTLQAFDSHCNIVLSDAIETI 50
>gi|159125035|gb|EDP50152.1| small nuclear ribonucleoprotein SmB, putative [Aspergillus
fumigatus A1163]
Length = 357
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
GR++ D ++ +++ LT GRQ+TG + +D+ +NLVL + EF R
Sbjct: 119 GRQQAGQDADTLINYRMRITLTDGRQMTGQMLAFDKHMNLVLADTEEFRR 168
>gi|164657750|ref|XP_001730001.1| hypothetical protein MGL_2987 [Malassezia globosa CBS 7966]
gi|159103895|gb|EDP42787.1| hypothetical protein MGL_2987 [Malassezia globosa CBS 7966]
Length = 147
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-----RGNLYNGIFVI 94
L VDK V V L GR++ G L+ YDQ NLVL +AVE + G++ G F++
Sbjct: 18 LVDLVDKRVIVVLRDGRKLLGVLRSYDQFANLVLQDAVERIFLGHRYGDVPKGTFIV 74
>gi|70994546|ref|XP_752051.1| small nuclear ribonucleoprotein SmB [Aspergillus fumigatus Af293]
gi|66849685|gb|EAL90013.1| small nuclear ribonucleoprotein SmB, putative [Aspergillus
fumigatus Af293]
Length = 357
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 35 GRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
GR++ D ++ +++ LT GRQ+TG + +D+ +NLVL + EF R
Sbjct: 119 GRQQAGQDADTLINYRMRITLTDGRQMTGQMLAFDKHMNLVLADTEEFRR 168
>gi|297527485|ref|YP_003669509.1| hypothetical protein Shell_1522 [Staphylothermus hellenicus DSM
12710]
gi|297256401|gb|ADI32610.1| Like-Sm ribonucleoprotein core [Staphylothermus hellenicus DSM
12710]
Length = 75
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
V +KL G R+V G LK YDQ LN+VLD+A E
Sbjct: 17 VLIKLKGEREVRGKLKSYDQHLNIVLDDAEEI 48
>gi|388582146|gb|EIM22452.1| RNA cap binding protein [Wallemia sebi CBS 633.66]
Length = 146
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-----GNLYNGIFVI 94
VDK + V L GR++ G L+ +DQ NLVL++AVE + ++ GIF+I
Sbjct: 17 VDKKMLVALRDGRKIIGVLRSFDQFANLVLNDAVERIHALNEYADIPRGIFLI 69
>gi|154343057|ref|XP_001567474.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064806|emb|CAM42912.1| putative small nuclear ribonucleoprotein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 82
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 33/48 (68%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+T+ +L F++K + VK+ GGR ++G L+G D+ +++VL A++ R
Sbjct: 4 NKTLPNLNHFMEKRIVVKIQGGRSISGVLRGVDEHMSIVLHNAMDETR 51
>gi|345566656|gb|EGX49598.1| hypothetical protein AOL_s00078g87 [Arthrobotrys oligospora ATCC
24927]
Length = 75
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+L K+++K + V+L G R++ G L+GYD LNL +D+ +E G I +V
Sbjct: 7 ELKKYLEKRLFVQLNGSRKIIGVLRGYDIFLNLCMDDCIEEKAGGEKERIGTVV 60
>gi|255945545|ref|XP_002563540.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588275|emb|CAP86377.1| Pc20g10480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 88
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 45 KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
++++K V +L G R+V G L+GYD +N+VLDEA E G
Sbjct: 20 QYMEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKEG 60
>gi|66533783|ref|XP_624537.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis mellifera]
gi|340726388|ref|XP_003401541.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus terrestris]
gi|350423978|ref|XP_003493651.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Bombus impatiens]
gi|380024341|ref|XP_003695959.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Apis florea]
gi|383847985|ref|XP_003699633.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Megachile rotundata]
Length = 96
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + + GR GTLKG+DQ +N++LDE+ E
Sbjct: 5 LESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHE 43
>gi|282164954|ref|YP_003357339.1| putative small nucleolar RNP Sm protein [Methanocella paludicola
SANAE]
gi|282157268|dbj|BAI62356.1| putative small nucleolar RNP Sm protein [Methanocella paludicola
SANAE]
Length = 72
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
MS R VL+ A ++ V V+L GGR+ G L+GYD +NLVLD A E
Sbjct: 1 MSQRPLDVLNDA--LNSPVIVRLKGGREFRGELQGYDMHMNLVLDNAEEL 48
>gi|354548424|emb|CCE45160.1| hypothetical protein CPAR2_701720 [Candida parapsilosis]
Length = 90
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 36 RKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+++ LDL +F +D+ V VKL G R+ G L+GYD NLVL +A E +
Sbjct: 10 QQQEPLDLIRFQLDEYVIVKLRGAREFKGKLQGYDSHCNLVLSDATETI 58
>gi|322784412|gb|EFZ11383.1| hypothetical protein SINV_13023 [Solenopsis invicta]
Length = 102
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + + GR GTLKG+DQ +N++LDE+ E
Sbjct: 11 LESYVNHTVSIITSDGRNFIGTLKGFDQTINIILDESHE 49
>gi|242016169|ref|XP_002428708.1| lsm1, putative [Pediculus humanus corporis]
gi|212513379|gb|EEB15970.1| lsm1, putative [Pediculus humanus corporis]
Length = 96
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + + GR GTL+G+DQ +NL+LDE+ E
Sbjct: 5 LESYVNHTVSIITSDGRNFVGTLRGFDQTINLILDESHE 43
>gi|110668788|ref|YP_658599.1| small nuclear ribonucleoprotein (snRNP)-like protein
[Haloquadratum walsbyi DSM 16790]
gi|109626535|emb|CAJ52998.1| RNA-binding protein Lsm [Haloquadratum walsbyi DSM 16790]
Length = 77
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
MSGR VL+ A +D V + L G GTL GYDQ +N VLD A+
Sbjct: 1 MSGRPLDVLEAA--LDDTVTITLKDGSAYHGTLAGYDQHMNAVLDPAM 46
>gi|91084979|ref|XP_972279.1| PREDICTED: similar to CG2021 CG2021-PA [Tribolium castaneum]
gi|270009009|gb|EFA05457.1| hypothetical protein TcasGA2_TC015638 [Tribolium castaneum]
Length = 96
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L FV+ V + + GR GTLKG+DQ +N+++DE+ E
Sbjct: 5 LDSFVNHTVSIITSDGRNFIGTLKGFDQTINVIIDESHE 43
>gi|363748022|ref|XP_003644229.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887861|gb|AET37412.1| hypothetical protein Ecym_1162 [Eremothecium cymbalariae
DBVPG#7215]
Length = 83
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 5/55 (9%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA----VEFLRGNL 87
+T LDL + +D+ V VKL G R++TGTL+ +D N+VL +A E + GNL
Sbjct: 3 DTPLDLLRLNLDEKVYVKLRGARKLTGTLQAFDSHCNIVLSDAEETIYELVDGNL 57
>gi|159111944|ref|XP_001706202.1| Small nuclear ribonucleoprotein Sm D2, putative [Giardia lamblia
ATCC 50803]
gi|157434296|gb|EDO78528.1| Small nuclear ribonucleoprotein Sm D2, putative [Giardia lamblia
ATCC 50803]
Length = 124
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 49 KGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
K V V+L GR +TG LK YD+ LNLV EA E N
Sbjct: 62 KPVLVQLRSGRFITGVLKAYDRHLNLVFSEATETWEEN 99
>gi|256077883|ref|XP_002575229.1| small nuclear ribonucleoprotein G (snrnp-G) [Schistosoma mansoni]
gi|353231785|emb|CCD79140.1| putative small nuclear ribonucleoprotein G (snrnp-G) [Schistosoma
mansoni]
Length = 76
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+L K++DK +++KL R+V G L+G+D +N+V+ +A E +
Sbjct: 8 ELKKYLDKRLRLKLNANREVVGVLRGFDAFMNIVVSDAYEVTK 50
>gi|448535532|ref|XP_003870996.1| Smx4 component of heteroheptameric complexes (Lsm1p, Lsm8p)
[Candida orthopsilosis Co 90-125]
gi|380355352|emb|CCG24870.1| Smx4 component of heteroheptameric complexes (Lsm1p, Lsm8p)
[Candida orthopsilosis]
Length = 91
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 36 RKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+++ LDL +F +D+ V VKL G R+ G L+GYD NLVL +A E +
Sbjct: 10 QQQEPLDLIRFQLDEYVIVKLRGAREFKGKLQGYDSHCNLVLSDATETI 58
>gi|313586493|gb|ADR71257.1| U6 snRNA-associated Sm-like protein LSm8 [Hevea brasiliensis]
Length = 98
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
T L L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 3 TGLGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHE 45
>gi|326435095|gb|EGD80665.1| LSM domain-containing protein [Salpingoeca sp. ATCC 50818]
Length = 91
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
E LDL + +D+ V VK+ G R ++G L YDQ LN+VL + VE +
Sbjct: 6 EEPLDLIRLSLDERVTVKMRGNRVLSGQLHAYDQHLNMVLSDVVETI 52
>gi|357622254|gb|EHJ73807.1| hypothetical protein KGM_20501 [Danaus plexippus]
Length = 96
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L ++++ V V GR GTLKG+DQ +N++LDE+ E
Sbjct: 5 LENYINQTVSVITADGRNFIGTLKGFDQTINIILDESHE 43
>gi|288560538|ref|YP_003424024.1| LSM domain-containing protein [Methanobrevibacter ruminantium M1]
gi|288543248|gb|ADC47132.1| LSM domain-containing protein [Methanobrevibacter ruminantium M1]
Length = 77
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 33 MSGRK--ETVLD-LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
MSG++ + LD L K V+ V +KL G R+ G LK +D +NLVLD+A E +G +
Sbjct: 1 MSGQQNVQRPLDALGKAVNSPVLIKLKGEREFRGILKSFDLHMNLVLDDAEELEKGEV 58
>gi|410671979|ref|YP_006924350.1| Small nuclear ribonucleoprotein, LSM family [Methanolobus
psychrophilus R15]
gi|409171107|gb|AFV24982.1| Small nuclear ribonucleoprotein, LSM family [Methanolobus
psychrophilus R15]
Length = 72
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
M R +L+ A ++ V V+L G R+ G L+GYD +NLVLDEA E G++
Sbjct: 1 MGNRPLDILNNA--LNTPVIVRLKGAREFRGKLQGYDVHMNLVLDEAEELKEGDI 53
>gi|126460705|ref|YP_001056983.1| LSM family small nuclear ribonucleoprotein [Pyrobaculum
calidifontis JCM 11548]
gi|126250426|gb|ABO09517.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
calidifontis JCM 11548]
Length = 86
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
L K ++K V +L GG V G L YD +NLVLD+A E R
Sbjct: 17 LTKMLNKEVVARLKGGIAVKGVLTAYDSCMNLVLDDAAELDR 58
>gi|384251155|gb|EIE24633.1| hypothetical protein COCSUDRAFT_53022 [Coccomyxa subellipsoidea
C-169]
Length = 99
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
LA VD + V GR + G L+GYDQ NL+LDE E
Sbjct: 7 LAPLVDSTISVITNDGRVIVGILRGYDQATNLILDECHE 45
>gi|159042090|ref|YP_001541342.1| like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
gi|157920925|gb|ABW02352.1| Like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
Length = 79
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL--RGNLYNGIFVI 94
+L+ V V VKL G + GTLK YDQ +NL+LD+ E + + ++ G+ VI
Sbjct: 12 ELSSVVGSTVLVKLRDGTTIRGTLKNYDQHMNLLLDDTEEIIDPKTSIKRGMVVI 66
>gi|448410087|ref|ZP_21575036.1| Sm ribonucleoprotein-like protein [Halosimplex carlsbadense
2-9-1]
gi|445672367|gb|ELZ24943.1| Sm ribonucleoprotein-like protein [Halosimplex carlsbadense
2-9-1]
Length = 61
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL--DEAVEFLRGN 86
MSGR VL+ + + + V V+L GG + G L GYDQ +NLVL D+ +RG+
Sbjct: 1 MSGRPLDVLEAS--LGEEVTVRLKGGEEYVGDLSGYDQHMNLVLEDDQDTTIIRGD 54
>gi|345323913|ref|XP_001506763.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm7-like
[Ornithorhynchus anatinus]
Length = 159
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 58 GRQVTGTLKGYDQLLNLVLDEAVEFLR 84
GR+ +G LKG+D LLNLVLD +E++R
Sbjct: 86 GRESSGILKGFDPLLNLVLDGTIEYMR 112
>gi|255565755|ref|XP_002523867.1| lsm1, putative [Ricinus communis]
gi|223536955|gb|EEF38593.1| lsm1, putative [Ricinus communis]
Length = 98
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LESLVDQNISVITNDGRNIVGILKGFDQATNIILDESHE 45
>gi|403214565|emb|CCK69066.1| hypothetical protein KNAG_0B06380 [Kazachstania naganishii CBS
8797]
Length = 83
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
ET L+L K +D+ V VKL G R + GTL+ +D N+VL +AVE
Sbjct: 3 ETPLNLLKLNLDERVYVKLRGARSMAGTLQAFDSHCNIVLSDAVE 47
>gi|395646750|ref|ZP_10434610.1| Like-Sm ribonucleoprotein core [Methanofollis liminatans DSM
4140]
gi|395443490|gb|EJG08247.1| Like-Sm ribonucleoprotein core [Methanofollis liminatans DSM
4140]
Length = 88
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
LK + M+ R +LD + V + L GG ++ G L+GYD LNLVLD A E + G
Sbjct: 9 LKVIAMTKRPLEILDQV-LNGQPVIISLKGGHEIRGVLQGYDVHLNLVLDRAEEEVDG 65
>gi|60692640|gb|AAX30638.1| SJCHGC06306 protein [Schistosoma japonicum]
gi|226485693|emb|CAX75266.1| putative small nuclear ribonucleoprotein G [Schistosoma
japonicum]
gi|226485695|emb|CAX75267.1| putative small nuclear ribonucleoprotein G [Schistosoma
japonicum]
gi|226485697|emb|CAX75268.1| putative small nuclear ribonucleoprotein G [Schistosoma
japonicum]
Length = 76
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+L K++DK +++KL R+V G L+G+D +N+V+ +A E +
Sbjct: 8 ELKKYLDKRLRLKLNANREVVGILRGFDAFMNIVVSDAYEVTK 50
>gi|195645046|gb|ACG41991.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 73
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 52 QVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
Q+K+ R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 12 QIKMNANRVVIGTLRGFDQFMNLVVDNTVE-VNGNDKTDIGMVV 54
>gi|170291026|ref|YP_001737842.1| Sm ribonucleoprotein core-like protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170175106|gb|ACB08159.1| Sm ribonucleoprotein core-like protein [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 80
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
LAK ++ V V L G V G LK YD LNL+LD A E + GN
Sbjct: 8 LAKSMNGSVLVILKNGVYVRGILKSYDNHLNLILDNAEEIMEGN 51
>gi|397779277|ref|YP_006543750.1| Sm ribonucleoprotein [Methanoculleus bourgensis MS2]
gi|396937779|emb|CCJ35034.1| Sm ribonucleoprotein [Methanoculleus bourgensis MS2]
Length = 75
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
M+ R +LD + V + L GGR++ G L+GYD +NLVLD+A E + G
Sbjct: 1 MTPRPLDILDQV-LNRQPVIISLKGGREIRGVLQGYDVHMNLVLDKAEEEMDG 52
>gi|226529351|ref|NP_001150391.1| LOC100284021 [Zea mays]
gi|194699348|gb|ACF83758.1| unknown [Zea mays]
gi|195638896|gb|ACG38916.1| LSM Sm-like protein family member [Zea mays]
gi|195642734|gb|ACG40835.1| LSM Sm-like protein family member [Zea mays]
gi|413946381|gb|AFW79030.1| LSM Sm-like protein family member [Zea mays]
Length = 99
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + GTL+G+DQ N++LDE+ E
Sbjct: 8 LEPLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>gi|401842941|gb|EJT44937.1| SMX2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 67
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+DK + + + G R++ G L+GYD LN+VLD+A+E
Sbjct: 1 MDKKILLNINGSRKIAGVLRGYDIFLNVVLDDAMEI 36
>gi|255724404|ref|XP_002547131.1| predicted protein [Candida tropicalis MYA-3404]
gi|240135022|gb|EER34576.1| predicted protein [Candida tropicalis MYA-3404]
Length = 62
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVCFL 98
+DK + V+L G R++ G LKGYD LN+ + A+E + I V VC L
Sbjct: 1 MDKKISVQLNGSRKIIGILKGYDIFLNITVTNALEVDSKGEHLNIGVTVCRL 52
>gi|366998846|ref|XP_003684159.1| hypothetical protein TPHA_0B00530 [Tetrapisispora phaffii CBS
4417]
gi|357522455|emb|CCE61725.1| hypothetical protein TPHA_0B00530 [Tetrapisispora phaffii CBS
4417]
Length = 85
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 39 TVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
T LDL K +D+ V VKL G R++ GTL+ +D N VL +AVE
Sbjct: 5 TPLDLLKLNLDERVYVKLRGARELVGTLQAFDSHCNFVLSDAVE 48
>gi|385804295|ref|YP_005840695.1| snRNP [Haloquadratum walsbyi C23]
gi|339729787|emb|CCC41068.1| RNA-binding protein Lsm [Haloquadratum walsbyi C23]
Length = 77
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAV 80
MSGR VL+ A +D V + L G GTL GYDQ +N VLD A+
Sbjct: 1 MSGRPLDVLEAA--LDDTVTITLKDGSAYYGTLAGYDQHMNAVLDPAM 46
>gi|449019835|dbj|BAM83237.1| U6 snRNA-associated Sm-like protein LSm3 [Cyanidioschyzon merolae
strain 10D]
Length = 102
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Query: 21 VSFNLGFLKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
+SF +G G+ E ++L + +D+ V VKL G R++ GTL YDQ LNL++ +A
Sbjct: 1 MSFTVG-------KGQLEEPVELLRIALDERVFVKLKGDRELVGTLHAYDQHLNLIISDA 53
Query: 80 VEFLR 84
E L+
Sbjct: 54 EETLQ 58
>gi|365759243|gb|EHN01044.1| Lsm3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 126
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+T LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE
Sbjct: 2 DTPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 46
>gi|425783989|gb|EKV21800.1| Small nuclear ribonucleoprotein SmG, putative [Penicillium
digitatum Pd1]
Length = 104
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+++K V +L G R+V G L+GYD +N+VLDEA E
Sbjct: 18 YMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFE 53
>gi|408404869|ref|YP_006862852.1| small nuclear ribonucleoprotein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365465|gb|AFU59195.1| putative small nuclear ribonucleoprotein [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 76
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 49 KGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
K V +KL GG+ + G L G+DQ +NL+L+++VE L N + IV
Sbjct: 16 KVVLIKLKGGKVIRGNLHGFDQHMNLLLEDSVEILEEGKSNDLGTIVV 63
>gi|433638868|ref|YP_007284628.1| small nuclear ribonucleoprotein [Halovivax ruber XH-70]
gi|433290672|gb|AGB16495.1| small nuclear ribonucleoprotein [Halovivax ruber XH-70]
Length = 99
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
+MSGR VL+ A D+ V+V L G + G L GYDQ +NLVL+EA
Sbjct: 19 RMSGRPLDVLE-AALGDR-VRVHLKTGTEYVGELAGYDQHMNLVLEEA 64
>gi|193716261|ref|XP_001944890.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Acyrthosiphon pisum]
Length = 96
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + + GR GTLKG+DQ +N++LD++ E
Sbjct: 5 LESYVNHTVSIITSDGRNFVGTLKGFDQTINIILDDSHE 43
>gi|209879413|ref|XP_002141147.1| LSM domain-containing protein [Cryptosporidium muris RN66]
gi|209556753|gb|EEA06798.1| LSM domain-containing protein [Cryptosporidium muris RN66]
Length = 112
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 39 TVLDLA---KFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
T+L LA K + + + L G R+++GTL+G+D+ +N+VLDE E+
Sbjct: 19 TLLPLALIDKCIGSRIYIILRGDREISGTLRGFDEYVNMVLDEVEEY 65
>gi|156841174|ref|XP_001643962.1| hypothetical protein Kpol_1001p16 [Vanderwaltozyma polyspora DSM
70294]
gi|156114593|gb|EDO16104.1| hypothetical protein Kpol_1001p16 [Vanderwaltozyma polyspora DSM
70294]
Length = 85
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
ET LDL K +D+ V VKL G R++ G L+ +D N+VL +AVE
Sbjct: 4 ETPLDLLKLNLDEKVYVKLRGARELVGILQAFDSHCNIVLSDAVE 48
>gi|312380997|gb|EFR26852.1| hypothetical protein AND_25852 [Anopheles darlingi]
Length = 95
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + GR GT+KG+DQ +N++LDE+ E
Sbjct: 4 LESYVNHTVSIITADGRNFVGTMKGFDQTINIILDESHE 42
>gi|170060880|ref|XP_001865997.1| LSM8 protein [Culex quinquefasciatus]
gi|167879234|gb|EDS42617.1| LSM8 protein [Culex quinquefasciatus]
Length = 95
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + GR GTLKG+DQ +N++LDE+ E
Sbjct: 4 LESYVNNTVSIITADGRNFVGTLKGFDQTVNIILDESHE 42
>gi|397601457|gb|EJK57913.1| hypothetical protein THAOC_22004 [Thalassiosira oceanica]
Length = 527
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L+ + +K V V GR +TGTL GYDQL NL+L + E
Sbjct: 5 LSDWSEKTVTVLTCDGRLITGTLAGYDQLQNLILSRSSE 43
>gi|115465821|ref|NP_001056510.1| Os05g0594900 [Oryza sativa Japonica Group]
gi|55733874|gb|AAV59381.1| unknown protein [Oryza sativa Japonica Group]
gi|113580061|dbj|BAF18424.1| Os05g0594900 [Oryza sativa Japonica Group]
Length = 99
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + GTL+G+DQ N++LDE+ E
Sbjct: 8 LESLVDQIISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>gi|410988918|ref|XP_004000722.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Felis catus]
Length = 123
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD 77
L ++++ V + + GR + GTLKG+DQ +NL+LD
Sbjct: 39 LENYINRTVAIIPSNGRMIVGTLKGFDQTINLILD 73
>gi|167043902|gb|ABZ08590.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG3H9]
gi|167044597|gb|ABZ09270.1| putative LSM domain protein [uncultured marine crenarchaeote
HF4000_APKG7F11]
Length = 76
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIVC 96
L + ++K V +KL G + + G L G+DQ +NL+LD+A E L N + +V
Sbjct: 10 LDESINKTVLIKLKGNKTIRGNLLGFDQHMNLLLDQAEEILSDGDSNSLGSLVV 63
>gi|76802788|ref|YP_330883.1| snRNP-like protein [Natronomonas pharaonis DSM 2160]
gi|76558653|emb|CAI50245.1| RNA-binding protein Lsm [Natronomonas pharaonis DSM 2160]
Length = 61
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA--VEFLRGN 86
MS R VL+ + + V V L GG GTL GYDQ +NLVL+E V +RG+
Sbjct: 1 MSNRPLDVLE--ETLGAEVHVTLKGGETYEGTLSGYDQHMNLVLEEGDNVTIIRGD 54
>gi|154339089|ref|XP_001562225.1| putative Lsm7p protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134062819|emb|CAM39264.1| putative Lsm7p protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 98
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLY 88
+KE +L L K++D+ V V G ++V G LKG+D +NLVL +A E G+ +
Sbjct: 18 KKEGILSLEKYLDRKVVVSQKG-QEVHGVLKGFDNNVNLVLADA-ELWHGDTH 68
>gi|440583672|emb|CCH47178.1| similar to small nuclear ribonucleoprotein G-like [Lupinus
angustifolius]
Length = 88
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 26 GFLKSLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
G L K G LD + +KL R + GTL+G+DQ +NLV+D VE + G
Sbjct: 7 GPLNKTKFDGPDTVQLDHYLYT-----IKLNANRMIVGTLRGFDQFMNLVVDNTVE-VNG 60
Query: 86 NLYNGIFVIV 95
N I ++V
Sbjct: 61 NEKTDIGMVV 70
>gi|219113037|ref|XP_002186102.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582952|gb|ACI65572.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 94
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Query: 45 KFVDKGVQVK----LTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+ +DK + K + G ++V GTL+G+D +NLVLD AVEF
Sbjct: 9 ELIDKAIGSKIWVLMRGTKEVVGTLQGFDDYVNLVLDNAVEF 50
>gi|168040498|ref|XP_001772731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675956|gb|EDQ62445.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 98
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +D+ + V GR + G LKG+DQ NL+LDE+ E
Sbjct: 7 LESLIDQTISVITNDGRNIVGVLKGFDQATNLILDESHE 45
>gi|358253136|dbj|GAA52245.1| small nuclear ribonucleoprotein G [Clonorchis sinensis]
Length = 75
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KL G R+V GTL+G+D +N+V+++A+E +
Sbjct: 18 IKLNGNREVIGTLRGFDAFMNIVINDAMEITK 49
>gi|83765541|dbj|BAE55684.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864814|gb|EIT74108.1| hypothetical protein Ao3042_09989 [Aspergillus oryzae 3.042]
Length = 122
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
++K V +L G R+V G L+GYD +N+VLDEA E +G
Sbjct: 1 MEKRVFCQLNGNRKVIGILRGYDVFMNIVLDEAFEEKQG 39
>gi|227827656|ref|YP_002829436.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.14.25]
gi|227830352|ref|YP_002832132.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
L.S.2.15]
gi|229579169|ref|YP_002837567.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.G.57.14]
gi|229582076|ref|YP_002840475.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus
Y.N.15.51]
gi|229584860|ref|YP_002843362.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.27]
gi|238619824|ref|YP_002914650.1| Sm ribonucleoprotein-like protein [Sulfolobus islandicus M.16.4]
gi|284997857|ref|YP_003419624.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|385773326|ref|YP_005645892.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
gi|385775964|ref|YP_005648532.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|227456800|gb|ACP35487.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus L.S.2.15]
gi|227459452|gb|ACP38138.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.14.25]
gi|228009883|gb|ACP45645.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.G.57.14]
gi|228012792|gb|ACP48553.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus Y.N.15.51]
gi|228019910|gb|ACP55317.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.27]
gi|238380894|gb|ACR41982.1| Like-Sm ribonucleoprotein core [Sulfolobus islandicus M.16.4]
gi|284445752|gb|ADB87254.1| Like-Sm ribonucleoprotein, core [Sulfolobus islandicus L.D.8.5]
gi|323474712|gb|ADX85318.1| archaeal Sm1 protein [Sulfolobus islandicus REY15A]
gi|323477440|gb|ADX82678.1| Sm ribonucleoprotein core-like protein [Sulfolobus islandicus
HVE10/4]
Length = 76
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
LA+ ++ V VKL G ++V GTL+ YDQ +NLVL ++ E
Sbjct: 9 LAESLNNLVLVKLKGNKEVRGTLRSYDQHMNLVLSDSEEI 48
>gi|448377944|ref|ZP_21560567.1| Like-Sm ribonucleoprotein core [Halovivax asiaticus JCM 14624]
gi|445654917|gb|ELZ07766.1| Like-Sm ribonucleoprotein core [Halovivax asiaticus JCM 14624]
Length = 99
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 32 KMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
+MSGR VL+ A D+ V+V L G + G L GYDQ +NLVL+EA
Sbjct: 19 RMSGRPLDVLE-AALGDR-VRVNLKTGTEYVGELAGYDQHMNLVLEEA 64
>gi|357132320|ref|XP_003567778.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Brachypodium distachyon]
Length = 99
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + GTL+G+DQ N++LDE+ E
Sbjct: 8 LESLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHE 46
>gi|171186416|ref|YP_001795335.1| like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
gi|170935628|gb|ACB40889.1| Like-Sm ribonucleoprotein core [Pyrobaculum neutrophilum V24Sta]
Length = 86
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
L K ++K V +L GG V GTL YD +NLVLD A E
Sbjct: 17 LTKMLNKEVVARLKGGVAVRGTLTAYDGCMNLVLDNAAEL 56
>gi|159041439|ref|YP_001540691.1| like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
gi|157920274|gb|ABW01701.1| Like-Sm ribonucleoprotein core [Caldivirga maquilingensis IC-167]
Length = 86
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
L V+K V VKL GR ++GTL+ DQ +N+VLD+A E
Sbjct: 16 LGMMVNKSVVVKLKAGRVLSGTLRFIDQCMNIVLDDAEEL 55
>gi|448341319|ref|ZP_21530281.1| Like-Sm ribonucleoprotein core [Natrinema gari JCM 14663]
gi|445628366|gb|ELY81674.1| Like-Sm ribonucleoprotein core [Natrinema gari JCM 14663]
Length = 75
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
MSGR VL+ A D+ V V+L G + G L GYDQ +NLVL++ + + GN+
Sbjct: 1 MSGRPLDVLE-ASLGDR-VTVRLKSGDEYVGDLAGYDQHMNLVLEDVMIPVEGNV 53
>gi|425781950|gb|EKV19884.1| Small nuclear ribonucleoprotein SmG, putative [Penicillium
digitatum PHI26]
Length = 85
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+++K V +L G R+V G L+GYD +N+VLDEA E
Sbjct: 18 YMEKRVFCQLNGNRKVIGVLRGYDVFMNIVLDEAFE 53
>gi|388514443|gb|AFK45283.1| unknown [Lotus japonicus]
Length = 98
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LESLVDQQISVITNDGRNIVGVLKGFDQATNIILDESHE 45
>gi|219884693|gb|ACL52721.1| unknown [Zea mays]
gi|413955445|gb|AFW88094.1| hypothetical protein ZEAMMB73_159101 [Zea mays]
Length = 74
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 52 QVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
VKL R V GTL+G+DQ +NLV+D VE + GN I ++V
Sbjct: 13 SVKLNANRVVIGTLRGFDQFMNLVIDNTVE-VNGNDKTDIGMVV 55
>gi|401838766|gb|EJT42227.1| LSM3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 89
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+T LDL K +D+ V +KL G R + GTL+ +D N+VL +AVE +
Sbjct: 2 DTPLDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVETI 48
>gi|449690492|ref|XP_002158063.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like, partial
[Hydra magnipapillata]
Length = 72
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVL 76
E LDL KF +D+ V VK+ R++ G L YDQ LN+VL
Sbjct: 11 EEPLDLMKFSLDEKVYVKMRNDRELRGKLHAYDQHLNMVL 50
>gi|351723875|ref|NP_001237294.1| uncharacterized protein LOC100305829 [Glycine max]
gi|356525792|ref|XP_003531507.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Glycine max]
gi|255626721|gb|ACU13705.1| unknown [Glycine max]
Length = 98
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHE 45
>gi|238882171|gb|EEQ45809.1| predicted protein [Candida albicans WO-1]
Length = 68
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF-LRGNLYN-GIFVIVCF 97
+DK + ++L G R++ G L+GYD LN+ L +A+E +G N G V +CF
Sbjct: 1 MDKKLSIQLNGSRKIIGILRGYDIFLNITLTDALEVDSKGEKMNIGATVCICF 53
>gi|432329499|ref|YP_007247642.1| small nuclear ribonucleoprotein [Methanoregula formicicum SMSP]
gi|432136208|gb|AGB01135.1| small nuclear ribonucleoprotein [Methanoregula formicicum SMSP]
Length = 75
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
M+ R +LD + V V L GGR++ G L+GYD +NLVLD+A E G +
Sbjct: 1 MTKRPLDILDQV-LNRQPVIVSLKGGREIRGVLQGYDVHMNLVLDKAEEVENGQV 54
>gi|18312179|ref|NP_558846.1| small nuclear ribonucleoprotein (Sm-like) [Pyrobaculum aerophilum
str. IM2]
gi|18159615|gb|AAL63028.1| small nuclear ribonucleoprotein homolog (Sm-like) [Pyrobaculum
aerophilum str. IM2]
Length = 80
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLY 88
L + K V VKL ++ G L+ +DQ +NL+L++A E + GN+Y
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVY 61
>gi|388521873|gb|AFK48998.1| unknown [Lotus japonicus]
Length = 80
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLYN----GIFVI 94
LA ++DK + V L GR++ GTL+ +DQ N VL+ A E + G+LY G++VI
Sbjct: 15 LASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
>gi|225454559|ref|XP_002263175.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary subunit
[Vitis vinifera]
gi|297737198|emb|CBI26399.3| unnamed protein product [Vitis vinifera]
Length = 98
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHE 45
>gi|119872206|ref|YP_930213.1| like-Sm ribonucleoprotein, core [Pyrobaculum islandicum DSM 4184]
gi|119673614|gb|ABL87870.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
islandicum DSM 4184]
Length = 86
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
L K ++K + +L GG V GTL YD +NLVLD A E
Sbjct: 17 LTKMLNKEIVARLKGGVAVKGTLTAYDGCMNLVLDNAAEL 56
>gi|21537395|gb|AAM61736.1| unknown [Arabidopsis thaliana]
Length = 128
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLYNGI 91
LA ++DK + V L GR++ G L+ +DQ N VL+EA E + G+LY I
Sbjct: 15 LAPYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDI 64
>gi|31240533|ref|XP_320680.1| AGAP011837-PA [Anopheles gambiae str. PEST]
gi|21288006|gb|EAA00327.1| AGAP011837-PA [Anopheles gambiae str. PEST]
Length = 95
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + GR GTLKG+DQ +N++LDE+ E
Sbjct: 4 LESYVNNTVSIITADGRNFVGTLKGFDQTVNVILDESHE 42
>gi|354610729|ref|ZP_09028685.1| Like-Sm ribonucleoprotein core [Halobacterium sp. DL1]
gi|353195549|gb|EHB61051.1| Like-Sm ribonucleoprotein core [Halobacterium sp. DL1]
Length = 60
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD-EAVEFLRGN 86
MSGR VL+ + +++ V V+L G + TG L GYDQ +N+VL+ E +RG+
Sbjct: 1 MSGRPLDVLE--ESLEESVTVRLKDGEEFTGVLTGYDQHMNIVLEGEDTIIIRGD 53
>gi|238880144|gb|EEQ43782.1| hypothetical protein CAWG_02031 [Candida albicans WO-1]
Length = 96
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LDL +F +D+ V VKL G R++ G L+GYD N+VL +A E +
Sbjct: 15 LDLIRFQLDEYVLVKLRGARELKGKLQGYDSHCNMVLSDAEETI 58
>gi|406696065|gb|EKC99361.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 113
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNG 90
L VDK V V L GR++ G L+ YDQ N +L+ VE LYNG
Sbjct: 13 LVDLVDKKVLVVLRDGRKLIGVLRSYDQFANFLLESTVE----RLYNG 56
>gi|402217673|gb|EJT97752.1| Sm-like ribonucleo protein [Dacryopinax sp. DJM-731 SS1]
Length = 135
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 5/53 (9%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-----RGNLYNGIFVI 94
VDK V + L GR++ G L+ YDQ NLVL+++ E + +++ G+FVI
Sbjct: 17 VDKKVLIVLRDGRKLVGVLRSYDQFANLVLEDSYERIFHGLEYADVWKGVFVI 69
>gi|327273127|ref|XP_003221332.1| PREDICTED: n-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Anolis carolinensis]
Length = 89
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 27 VAVITSDGRMIVGTLKGFDQTINLILDESHE 57
>gi|388510216|gb|AFK43174.1| unknown [Lotus japonicus]
Length = 98
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LESLVDQQISVITNDGRNIVGILKGFDQATNIILDESHE 45
>gi|268552449|ref|XP_002634207.1| C. briggsae CBR-LSM-3 protein [Caenorhabditis briggsae]
Length = 102
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 29 KSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
K + +S E LDL + +D+ V VK+ R++ G L+ +DQ LN+VL E E +
Sbjct: 6 KEVTLSATVEEPLDLLRLSLDEKVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETI 61
>gi|126178181|ref|YP_001046146.1| like-Sm ribonucleoprotein, core [Methanoculleus marisnigri JR1]
gi|125860975|gb|ABN56164.1| Small nuclear ribonucleoprotein, LSM family [Methanoculleus
marisnigri JR1]
Length = 75
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
M+ R +LD + V + L GGR++ G L+GYD +NLVLD+A E + G
Sbjct: 1 MTPRPLDILDQV-LNRQPVIISLKGGREIRGILQGYDVHMNLVLDKAEEEVDG 52
>gi|448338508|ref|ZP_21527554.1| Like-Sm ribonucleoprotein core [Natrinema pallidum DSM 3751]
gi|448345677|ref|ZP_21534566.1| Like-Sm ribonucleoprotein core [Natrinema altunense JCM 12890]
gi|445622626|gb|ELY76076.1| Like-Sm ribonucleoprotein core [Natrinema pallidum DSM 3751]
gi|445633610|gb|ELY86797.1| Like-Sm ribonucleoprotein core [Natrinema altunense JCM 12890]
Length = 75
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
MSGR VL+ A D+ V V+L G + G L GYDQ +NLVL++ + GN+
Sbjct: 1 MSGRPLDVLE-ASLGDR-VTVRLKSGDEYVGDLAGYDQHMNLVLEDVTIPVEGNV 53
>gi|384491006|gb|EIE82202.1| hypothetical protein RO3G_06907 [Rhizopus delemar RA 99-880]
Length = 102
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 35 GRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
G E LDL + +D+ V VKL G R++TG L YD LN+VL E E +
Sbjct: 13 GAVEEPLDLVRLSLDERVYVKLRGDRELTGILHAYDGHLNMVLGEVEETI 62
>gi|336376345|gb|EGO04680.1| hypothetical protein SERLA73DRAFT_173904 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389388|gb|EGO30531.1| hypothetical protein SERLADRAFT_454838 [Serpula lacrymans var.
lacrymans S7.9]
Length = 136
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-----GNLYNGIFVI 94
L VD+ + V L GR++ G L+ YDQ NLVL++ VE L ++GIFVI
Sbjct: 13 LVDCVDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERLYHENTFAENWHGIFVI 69
>gi|401883959|gb|EJT48139.1| RNA cap binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 147
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNG 90
L VDK V V L GR++ G L+ YDQ N +L+ VE LYNG
Sbjct: 13 LVDLVDKKVLVVLRDGRKLIGVLRSYDQFANFLLESTVE----RLYNG 56
>gi|302348719|ref|YP_003816357.1| hypothetical protein ASAC_0920 [Acidilobus saccharovorans 345-15]
gi|302329131|gb|ADL19326.1| hypothetical protein ASAC_0920 [Acidilobus saccharovorans 345-15]
Length = 78
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
R T + ++++ V VKL GG V G LK +DQ LNLVL+ A E
Sbjct: 7 RTNTFKVMNEYLNASVYVKLKGGEGVKGVLKSFDQHLNLVLENAEEL 53
>gi|308492161|ref|XP_003108271.1| CRE-LSM-3 protein [Caenorhabditis remanei]
gi|308249119|gb|EFO93071.1| CRE-LSM-3 protein [Caenorhabditis remanei]
Length = 102
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 29 KSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
K + +S E +DL + +D+ V VK+ R++ G L+ +DQ LN+VL E E +
Sbjct: 6 KEVTLSATVEEPIDLLRLSLDERVYVKMRNDREIRGRLRAFDQHLNMVLSEVEETI 61
>gi|298711111|emb|CBJ32339.1| U6 snRNA-associated Sm-like protein LSm3 [Ectocarpus siliculosus]
Length = 93
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 33 MSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVL 76
MS E LDL + +D+ + VK G R++ G L YDQ LN+VL
Sbjct: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVL 45
>gi|14277786|pdb|1I8F|A Chain A, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277787|pdb|1I8F|B Chain B, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277788|pdb|1I8F|C Chain C, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277789|pdb|1I8F|D Chain D, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277790|pdb|1I8F|E Chain E, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277791|pdb|1I8F|F Chain F, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|14277792|pdb|1I8F|G Chain G, The Crystal Structure Of A Heptameric Archaeal Sm
Protein: Implications For The Eukaryotic Snrnp Core
gi|29726402|pdb|1LNX|A Chain A, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726403|pdb|1LNX|B Chain B, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726404|pdb|1LNX|C Chain C, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726405|pdb|1LNX|D Chain D, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726406|pdb|1LNX|E Chain E, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726407|pdb|1LNX|F Chain F, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
gi|29726408|pdb|1LNX|G Chain G, Crystal Structure Of The P.Aerophilum Smap1 Heptamer In
A New Crystal Form (C2221)
Length = 81
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLY 88
L + K V VKL ++ G L+ +DQ +NL+L++A E + GN+Y
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVY 61
>gi|399216324|emb|CCF73012.1| unnamed protein product [Babesia microti strain RI]
Length = 93
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 41 LDLAKFV-DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LDL + D+ V +K G R++TG L YD+ N++L++AVE +
Sbjct: 11 LDLIRLTLDEYVYIKSKGNREITGKLHAYDEHCNIILEDAVETI 54
>gi|449439529|ref|XP_004137538.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
gi|449514856|ref|XP_004164499.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cucumis sativus]
Length = 98
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LDSLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHE 45
>gi|444322267|ref|XP_004181789.1| hypothetical protein TBLA_0G03330 [Tetrapisispora blattae CBS
6284]
gi|387514834|emb|CCH62270.1| hypothetical protein TBLA_0G03330 [Tetrapisispora blattae CBS
6284]
Length = 76
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ +L K+V++ + +KL R V G L+GYD LN+V++ +E
Sbjct: 3 STPELKKYVNRKILLKLNNNRTVIGELRGYDIFLNVVIENGIE 45
>gi|170041123|ref|XP_001848324.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864689|gb|EDS28072.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 123
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + GR GTLKG+DQ +N++LDE+ E
Sbjct: 4 LESYVNNTVSIITADGRNFVGTLKGFDQTVNIILDESHE 42
>gi|195642632|gb|ACG40784.1| small nuclear ribonucleoprotein G [Zea mays]
Length = 66
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQL--LNLVLDEAVEFLRGNLYNGIFV 93
R DL K++DK +Q+K+ R V GTL+G+DQ +L + N N + +
Sbjct: 3 RSGQPPDLKKYMDKKLQIKMNANRVVIGTLRGFDQAGSRQALLSAPTNHVECNPKNVLIM 62
Query: 94 IVC 96
IV
Sbjct: 63 IVA 65
>gi|241959048|ref|XP_002422243.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
gi|223645588|emb|CAX40247.1| U6 snRNA-associated Sm-like protein, putative [Candida
dubliniensis CD36]
Length = 96
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LDL +F +D+ V VKL G R++ G L+GYD N+VL +A E +
Sbjct: 15 LDLIRFQLDEYVLVKLRGARELKGKLQGYDSHCNMVLSDAQETI 58
>gi|326522308|dbj|BAK07616.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 70
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ VKL R V GTL+G+DQ +NLV+D VE
Sbjct: 12 LPVKLNANRVVIGTLRGFDQFMNLVVDNTVE 42
>gi|156405763|ref|XP_001640901.1| predicted protein [Nematostella vectensis]
gi|156228037|gb|EDO48838.1| predicted protein [Nematostella vectensis]
Length = 96
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V V GR + GTLKG+DQ +N++LD++ E
Sbjct: 5 LESYVNHTVAVITQDGRMIVGTLKGFDQTVNVILDDSHE 43
>gi|399576624|ref|ZP_10770379.1| small nuclear ribonucleoprotein, lsm family [Halogranum salarium
B-1]
gi|399238068|gb|EJN58997.1| small nuclear ribonucleoprotein, lsm family [Halogranum salarium
B-1]
Length = 77
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
MSGR VL+ + +++ V V+L G + GTL GYDQ +N+VL+E+++
Sbjct: 1 MSGRPLDVLEAS--LNEPVTVQLKDGAEYYGTLAGYDQHMNVVLEESLD 47
>gi|403164177|ref|XP_003324247.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164920|gb|EFP79828.2| hypothetical protein PGTG_05053 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 142
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG------NLYNGIFVI 94
L VDK + V L G+++ G L+ YDQ NLVL + +E + +++ GI+++
Sbjct: 16 LVDIVDKKILVSLRDGKKLIGVLRSYDQFANLVLQDTIERIHDGICKYTDIWRGIYLV 73
>gi|383320750|ref|YP_005381591.1| Small nuclear ribonucleoprotein, LSM family [Methanocella
conradii HZ254]
gi|379322120|gb|AFD01073.1| Small nuclear ribonucleoprotein, LSM family [Methanocella
conradii HZ254]
Length = 72
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
MS R VL+ A ++ V V+L GGR+ G L+GYD +NLVL+ A E
Sbjct: 1 MSQRPLDVLNDA--LNSPVIVRLKGGREFRGELQGYDMHMNLVLENAEEL 48
>gi|17543872|ref|NP_502579.1| Protein LSM-3 [Caenorhabditis elegans]
gi|14530659|emb|CAB60606.2| Protein LSM-3 [Caenorhabditis elegans]
Length = 102
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 29 KSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
K + +S E LDL + +D+ V VK+ R++ G L+ +DQ LN+VL E E +
Sbjct: 6 KEVTLSATVEEPLDLLRLSLDERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETI 61
>gi|71031248|ref|XP_765266.1| small nuclear ribonucleoprotein G [Theileria parva strain Muguga]
gi|68352222|gb|EAN32983.1| small nuclear ribonucleoprotein G, putative [Theileria parva]
Length = 86
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
V L G R V G L+GYD +N+VLD A+E
Sbjct: 27 VHLNGSRHVVGVLRGYDTFMNIVLDNALE 55
>gi|354486322|ref|XP_003505330.1| PREDICTED: N-alpha-acetyltransferase 38, NatC auxiliary
subunit-like [Cricetulus griseus]
Length = 121
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
V V + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 38 VAVITSDGRMIVGTLKGFDQTINLILDESHE 68
>gi|47210706|emb|CAF89998.1| unnamed protein product [Tetraodon nigroviridis]
Length = 99
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 48 DKG-VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
D G V + + GR + GTLKG+DQ +NL+LDE+ E
Sbjct: 12 DSGTVAIVTSDGRMIVGTLKGFDQTINLILDESHE 46
>gi|257388144|ref|YP_003177917.1| Sm ribonucleoprotein-like protein [Halomicrobium mukohataei DSM
12286]
gi|257170451|gb|ACV48210.1| Like-Sm ribonucleoprotein core [Halomicrobium mukohataei DSM
12286]
Length = 60
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL-DEAVEFLRGN 86
MSGR VL+ + + + V V L GG G L GYDQ +NLV+ DE +RG+
Sbjct: 1 MSGRPLDVLEAS--LGETVTVHLKGGELYEGELSGYDQHMNLVIEDEDTTIIRGD 53
>gi|328856685|gb|EGG05805.1| hypothetical protein MELLADRAFT_36483 [Melampsora larici-populina
98AG31]
Length = 152
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VDK + V L GR + G L+ YDQ NLVL +A+E
Sbjct: 16 LVDIVDKKILVSLRDGRSLIGVLRSYDQFANLVLQDAIE 54
>gi|18394697|ref|NP_564072.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
gi|15724180|gb|AAL06482.1|AF411792_1 At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|20334848|gb|AAM16180.1| At1g19120/F14D16_26 [Arabidopsis thaliana]
gi|332191686|gb|AEE29807.1| Small nuclear ribonucleoprotein family protein [Arabidopsis
thaliana]
Length = 128
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLYNGI 91
LA ++DK + V L GR++ G L+ +DQ N VL+EA E + G+LY I
Sbjct: 15 LAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEEAYERVIVGDLYCDI 64
>gi|71663496|ref|XP_818740.1| small nuclear ribonucleoprotein Sm-G [Trypanosoma cruzi strain CL
Brener]
gi|70884008|gb|EAN96889.1| small nuclear ribonucleoprotein Sm-G, putative [Trypanosoma
cruzi]
Length = 82
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K + +L F++K V VKL GGR ++G L+G D L +VL +A +
Sbjct: 4 KRSPPNLNHFMEKRVVVKLQGGRSISGELRGVDNFLGVVLFDATD 48
>gi|71001662|ref|XP_755512.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus fumigatus
Af293]
gi|66853150|gb|EAL93474.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus Af293]
gi|159129580|gb|EDP54694.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
fumigatus A1163]
Length = 177
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNLY----NGIFV 93
T L DK + + L GR++ G L+ +DQ NLVL + +E L GNLY GIF+
Sbjct: 49 TAAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFL 108
Query: 94 I 94
+
Sbjct: 109 V 109
>gi|334183663|ref|NP_001185323.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196294|gb|AEE34415.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 141
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHE 45
>gi|91774104|ref|YP_566796.1| small nuclear ribonucleoprotein [Methanococcoides burtonii DSM
6242]
gi|121684189|sp|Q12U30.1|RUXX_METBU RecName: Full=Putative snRNP Sm-like protein
gi|91713119|gb|ABE53046.1| Sm or Sm-like protein, RNA-binding [Methanococcoides burtonii DSM
6242]
Length = 72
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
M R +L+ A ++ V V+L G R+ G L+GYD +NLVLDEA E G +
Sbjct: 1 MGNRPLDILNDA--LNTSVIVRLKGAREFRGVLQGYDVHMNLVLDEAEELKDGEI 53
>gi|385806095|ref|YP_005842493.1| Like-Sm ribonucleoprotein, core [Fervidicoccus fontis Kam940]
gi|383795958|gb|AFH43041.1| Like-Sm ribonucleoprotein, core [Fervidicoccus fontis Kam940]
Length = 146
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L +DK V +KL GR + GTL G+D LN++L A E
Sbjct: 9 ELNALLDKQVTIKLKDGRTIKGTLYGFDDKLNILLKNATE 48
>gi|224059783|ref|XP_002299990.1| predicted protein [Populus trichocarpa]
gi|118484411|gb|ABK94082.1| unknown [Populus trichocarpa]
gi|222847248|gb|EEE84795.1| predicted protein [Populus trichocarpa]
Length = 98
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + + GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LESLVDQTISIITNDGRNIVGVLKGFDQATNIILDESHE 45
>gi|443702849|gb|ELU00673.1| hypothetical protein CAPTEDRAFT_206003 [Capitella teleta]
Length = 96
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L FV V V GR + G +KG+DQ +NL+LDE+ E
Sbjct: 5 LESFVGHQVSVITADGRVINGVMKGFDQAINLILDESHE 43
>gi|119481233|ref|XP_001260645.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
gi|119408799|gb|EAW18748.1| small nuclear ribonucleoprotein (LSM1), putative [Neosartorya
fischeri NRRL 181]
Length = 177
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNLY----NGIFV 93
T L DK + + L GR++ G L+ +DQ NLVL + +E L GNLY GIF+
Sbjct: 49 TAAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFL 108
Query: 94 I 94
+
Sbjct: 109 V 109
>gi|328859290|gb|EGG08400.1| hypothetical protein MELLADRAFT_105058 [Melampsora
larici-populina 98AG31]
Length = 124
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 48 DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DK V V GR +TG LKG+DQ N++L E++E
Sbjct: 38 DKRVLVITQDGRTITGDLKGFDQTTNIILSESIE 71
>gi|213404570|ref|XP_002173057.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
gi|212001104|gb|EEB06764.1| U6 snRNP-associated protein Lsm8 [Schizosaccharomyces japonicus
yFS275]
Length = 94
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+ LA+FV++ V+V GR V G+L+G+DQ NL+L + E L
Sbjct: 1 MSLAEFVEQQVEVITNDGRCVLGSLRGFDQTTNLILSNSKERL 43
>gi|407917694|gb|EKG10998.1| hypothetical protein MPH_12001 [Macrophomina phaseolina MS6]
Length = 170
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 7/62 (11%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE--FLRGNLY----NGIF 92
T L DK + V L GR++ G L+ +DQ NLVL E +E F++ NLY G+F
Sbjct: 42 TAAQLLDLTDKKLMVALRDGRKLIGVLRSWDQFANLVLQETIERIFVQ-NLYADINRGVF 100
Query: 93 VI 94
++
Sbjct: 101 LV 102
>gi|393247771|gb|EJD55278.1| Sm-like ribonucleo protein [Auricularia delicata TFB-10046 SS5]
Length = 136
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLY----NGIFVI 94
VDK + V L GR++ G L+ YDQ NLVL++ +E F G Y G+F+I
Sbjct: 17 VDKKMLVVLRDGRKLVGVLRSYDQFANLVLEDTIERFYHGQNYGEVRRGVFLI 69
>gi|305662480|ref|YP_003858768.1| Sm ribonucleoprotein-like protein [Ignisphaera aggregans DSM
17230]
gi|304377049|gb|ADM26888.1| Like-Sm ribonucleoprotein core [Ignisphaera aggregans DSM 17230]
Length = 78
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LA+ + + V +KL GG+ V G L+ YD LN+VLD+A E L
Sbjct: 14 LAESLGQMVLIKLRGGKSVRGKLRSYDLHLNIVLDDAEEEL 54
>gi|3289993|gb|AAC25622.1|AAC25622 R30783_1 [Homo sapiens]
Length = 145
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 58 GRQVTGTLKGYDQLLNLVLDEAVEFLR 84
GR +G LKG+D LLNLVLD +E++R
Sbjct: 72 GRPRSGILKGFDPLLNLVLDGTIEYMR 98
>gi|121543869|gb|ABM55599.1| U6 snRNA-associated Sm-like protein [Maconellicoccus hirsutus]
Length = 95
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +V+ V + GR GTLKG+DQ LN++LD++ E
Sbjct: 4 LESYVNHIVTIITADGRHFVGTLKGFDQTLNVILDDSHE 42
>gi|145516418|ref|XP_001444103.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411503|emb|CAK76706.1| unnamed protein product [Paramecium tetraurelia]
Length = 104
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG-------NLYNG 90
DL K+ K +++KL R + GT+ G+D +NLVLD E + G NLY G
Sbjct: 17 DLNKYFGKRLKIKLNAKRTIIGTVIGFDIFMNLVLDHCKELIPGQGAENKDNLYPG 72
>gi|19173631|ref|NP_597434.1| SMALL NUCLEAR RIBONUCLEOPROTEIN G [Encephalitozoon cuniculi
GB-M1]
gi|19170837|emb|CAD26611.1| SMALL NUCLEAR RIBONUCLEOPROTEIN G [Encephalitozoon cuniculi
GB-M1]
gi|449329224|gb|AGE95498.1| small nuclear ribonucleoprotein g [Encephalitozoon cuniculi]
Length = 78
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
K V +LA + K + V++ GG + G L GYD +N+VL E E
Sbjct: 3 KSAVPNLASLLHKRIVVRIGGGHTLKGLLTGYDAFMNIVLSEVTE 47
>gi|119589796|gb|EAW69390.1| LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
Length = 146
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 58 GRQVTGTLKGYDQLLNLVLDEAVEFLR 84
GR +G LKG+D LLNLVLD +E++R
Sbjct: 73 GRPRSGILKGFDPLLNLVLDGTIEYMR 99
>gi|428182006|gb|EKX50868.1| hypothetical protein GUITHDRAFT_157257 [Guillardia theta
CCMP2712]
Length = 96
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L+ +D V + GR + GTLKG DQ LN++L+E E
Sbjct: 5 LSSLIDSPVSIITNDGRNIIGTLKGLDQKLNVILEECYE 43
>gi|45190730|ref|NP_984984.1| AER125Cp [Ashbya gossypii ATCC 10895]
gi|44983709|gb|AAS52808.1| AER125Cp [Ashbya gossypii ATCC 10895]
gi|374108207|gb|AEY97114.1| FAER125Cp [Ashbya gossypii FDAG1]
Length = 83
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+T LDL + +D+ V VKL G R+++GTL+ +D N+VL +A E +
Sbjct: 3 DTPLDLLRLNLDERVYVKLRGARKLSGTLQAFDSHCNIVLSDAEETI 49
>gi|303277307|ref|XP_003057947.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460604|gb|EEH57898.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L + VD + V + GR + G L+G+DQ NL+LDE E
Sbjct: 4 ELTELVDTLISVITSDGRNIVGVLRGFDQTTNLILDECFE 43
>gi|290989375|ref|XP_002677313.1| predicted protein [Naegleria gruberi]
gi|284090920|gb|EFC44569.1| predicted protein [Naegleria gruberi]
Length = 95
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVL 76
LDL + +D+ V +KL G R++ GTL YDQ LN+VL
Sbjct: 10 LDLIRLSLDEQVYIKLKGDRELRGTLHAYDQHLNMVL 46
>gi|116783136|gb|ABK22805.1| unknown [Picea sitchensis]
Length = 172
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLY 88
LA ++DK + V L GR++ G L+ +DQ N VL+ A+E + G+LY
Sbjct: 59 LASYLDKKLLVLLRDGRKLIGILRSFDQFANAVLENALERIIVGDLY 105
>gi|134056432|emb|CAL00599.1| unnamed protein product [Aspergillus niger]
Length = 143
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNLY----NGIFV 93
T L DK + + L GR++ G L+ +DQ NLVL + +E L GNLY GIF+
Sbjct: 15 TAAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFL 74
Query: 94 I 94
+
Sbjct: 75 V 75
>gi|262089301|gb|ACY24522.1| putative LSM domain protein [uncultured crenarchaeote 57a5]
Length = 104
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 23 FNLGFLK-SLKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
N+G K L+MS L + + K V VKL G R V G +KG+D+ +N+V+ +A E
Sbjct: 8 INIGLSKGKLRMSEEGIATQLLQESIGKNVLVKLKGRRSVRGKIKGFDKQMNIVITDATE 67
Query: 82 FL 83
+
Sbjct: 68 II 69
>gi|254565075|ref|XP_002489648.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
gi|238029444|emb|CAY67367.1| Lsm (Like Sm) protein [Komagataella pastoris GS115]
Length = 84
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+D+ V VKL G R++ G L YD NLVL +AVE +
Sbjct: 14 LDEKVYVKLRGAREIVGKLHAYDNHCNLVLGDAVETI 50
>gi|440302928|gb|ELP95234.1| small nuclear ribonucleoprotein G, putative [Entamoeba invadens
IP1]
Length = 88
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
+L +++K + VK+ R + G L+G+D+ LNLVLD+A
Sbjct: 14 ELKHYMEKRIYVKIHCNRAIIGVLRGFDEYLNLVLDDA 51
>gi|448727785|ref|ZP_21710134.1| Like-Sm ribonucleoprotein core [Halococcus morrhuae DSM 1307]
gi|445789771|gb|EMA40450.1| Like-Sm ribonucleoprotein core [Halococcus morrhuae DSM 1307]
Length = 78
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
MSGR VL+ A D GV V+L G TG L GYDQ LN+VL+ A
Sbjct: 1 MSGRPLDVLE-ANLGD-GVAVRLKDGATYTGELGGYDQHLNVVLEPA 45
>gi|19076009|ref|NP_588509.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59799781|sp|O74483.1|LSM8_SCHPO RecName: Full=U6 snRNA-associated Sm-like protein LSm8
gi|3395591|emb|CAA20133.1| U6 snRNP-associated protein Lsm8 (predicted) [Schizosaccharomyces
pombe]
Length = 94
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ LA F+++ VQV GR V G+LKG+D NL+L ++ E
Sbjct: 1 MSLADFMEQRVQVITNDGRVVLGSLKGFDHTTNLILSDSFE 41
>gi|351721438|ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
Length = 128
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLYN----GIFVI 94
LA ++DK + V L GR++ GTL+ +DQ N VL+ A E + G+LY G++VI
Sbjct: 15 LASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
>gi|55377641|ref|YP_135491.1| snRNP-like protein [Haloarcula marismortui ATCC 43049]
gi|448633752|ref|ZP_21674251.1| snRNP-like protein [Haloarcula vallismortis ATCC 29715]
gi|448639871|ref|ZP_21677019.1| snRNP-like protein [Haloarcula sinaiiensis ATCC 33800]
gi|448659277|ref|ZP_21683245.1| snRNP-like protein [Haloarcula californiae ATCC 33799]
gi|448677873|ref|ZP_21689063.1| snRNP-like protein [Haloarcula argentinensis DSM 12282]
gi|55230366|gb|AAV45785.1| snRNP-like protein [Haloarcula marismortui ATCC 43049]
gi|445750443|gb|EMA01881.1| snRNP-like protein [Haloarcula vallismortis ATCC 29715]
gi|445760779|gb|EMA12036.1| snRNP-like protein [Haloarcula californiae ATCC 33799]
gi|445762398|gb|EMA13619.1| snRNP-like protein [Haloarcula sinaiiensis ATCC 33800]
gi|445773548|gb|EMA24581.1| snRNP-like protein [Haloarcula argentinensis DSM 12282]
Length = 60
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL-DEAVEFLRGN 86
MSGR VL+ + + + V V+L GG G L GYDQ +NLV+ DE +RG+
Sbjct: 1 MSGRPLDVLEAS--LGETVTVQLKGGELFEGELTGYDQHMNLVVEDEDTTIIRGD 53
>gi|125976760|ref|XP_001352413.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|195170789|ref|XP_002026194.1| GL16212 [Drosophila persimilis]
gi|54641159|gb|EAL29909.1| GA15189 [Drosophila pseudoobscura pseudoobscura]
gi|194111074|gb|EDW33117.1| GL16212 [Drosophila persimilis]
Length = 95
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +++ V + GR GTLKG+DQ +N+++DE E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>gi|238496495|ref|XP_002379483.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
gi|317147143|ref|XP_003189890.1| small nuclear ribonucleoprotein (LSM1) [Aspergillus oryzae RIB40]
gi|220694363|gb|EED50707.1| small nuclear ribonucleoprotein (LSM1), putative [Aspergillus
flavus NRRL3357]
Length = 174
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNLY----NGIFV 93
T L DK + + L GR++ G L+ +DQ NLVL + +E L GNLY GIF+
Sbjct: 46 TAAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYAEISRGIFL 105
Query: 94 I 94
+
Sbjct: 106 V 106
>gi|344211722|ref|YP_004796042.1| snRNP-like protein [Haloarcula hispanica ATCC 33960]
gi|448666742|ref|ZP_21685387.1| snRNP-like protein [Haloarcula amylolytica JCM 13557]
gi|448688412|ref|ZP_21694245.1| snRNP-like protein [Haloarcula japonica DSM 6131]
gi|343783077|gb|AEM57054.1| snRNP-like protein [Haloarcula hispanica ATCC 33960]
gi|445771873|gb|EMA22929.1| snRNP-like protein [Haloarcula amylolytica JCM 13557]
gi|445779473|gb|EMA30403.1| snRNP-like protein [Haloarcula japonica DSM 6131]
Length = 60
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL-DEAVEFLRGN 86
MSGR VL+ + + + V V+L GG G L GYDQ +NLV+ DE +RG+
Sbjct: 1 MSGRPLDVLEAS--LGETVTVQLKGGEIFEGELTGYDQHMNLVVEDEDTTIIRGD 53
>gi|15218779|ref|NP_176747.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|79320777|ref|NP_001031238.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|17979539|gb|AAL50104.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|20334918|gb|AAM16215.1| At1g65700/F1E22_3 [Arabidopsis thaliana]
gi|21592627|gb|AAM64576.1| small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
gi|332196292|gb|AEE34413.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
gi|332196293|gb|AEE34414.1| U6 snRNA-associated Sm-like protein LSm8 [Arabidopsis thaliana]
Length = 98
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L VD+ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 7 LETLVDQIISVITNDGRNIVGVLKGFDQATNIILDESHE 45
>gi|14600779|ref|NP_147300.1| small nucleolar RNP protein Sm [Aeropyrum pernix K1]
gi|10720267|sp|Q9YEQ5.1|RUXX_AERPE RecName: Full=Putative snRNP Sm-like protein
gi|5104175|dbj|BAA79491.1| small nucleolar RNP protein Sm [Aeropyrum pernix K1]
Length = 77
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+VD V VKL G ++ G LK YDQ LN++L +A E
Sbjct: 16 YVDTPVLVKLKSGLRIKGVLKTYDQHLNIILGDAEEI 52
>gi|405968071|gb|EKC33173.1| U6 snRNA-associated Sm-like protein LSm7, partial [Crassostrea
gigas]
Length = 69
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/22 (72%), Positives = 18/22 (81%)
Query: 63 GTLKGYDQLLNLVLDEAVEFLR 84
G LKGYD LLNLVLD+ E+LR
Sbjct: 3 GVLKGYDPLLNLVLDDTTEYLR 24
>gi|317026774|ref|XP_001399521.2| small nuclear ribonucleoprotein (LSM1) [Aspergillus niger CBS
513.88]
gi|350634459|gb|EHA22821.1| hypothetical protein ASPNIDRAFT_174735 [Aspergillus niger ATCC
1015]
gi|358365679|dbj|GAA82301.1| small nuclear ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 174
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNLY----NGIFV 93
T L DK + + L GR++ G L+ +DQ NLVL + +E L GNLY GIF+
Sbjct: 46 TAAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERLYAGNLYADIPRGIFL 105
Query: 94 I 94
+
Sbjct: 106 V 106
>gi|302790966|ref|XP_002977250.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
gi|300155226|gb|EFJ21859.1| hypothetical protein SELMODRAFT_417143 [Selaginella
moellendorffii]
Length = 103
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
S K+T L+ V++ + V GR + G LKGYDQ NL++DE+ E
Sbjct: 3 SANKDTGLEY--LVNQLISVITNDGRNIVGMLKGYDQATNLIIDESHE 48
>gi|170083973|ref|XP_001873210.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650762|gb|EDR15002.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 136
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNL----YNGIFVI 94
VD+ + V L GR++ G L+ YDQ NLVL++ VE + GN ++G+F+I
Sbjct: 17 VDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAENWHGLFLI 69
>gi|392597347|gb|EIW86669.1| Sm-like ribonucleo protein [Coniophora puteana RWD-64-598 SS2]
Length = 136
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 5/53 (9%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNL----YNGIFVI 94
VD+ + V L GR++ G L+ YDQ NLVL++ VE + GN ++G+F+I
Sbjct: 17 VDRKMLVILRDGRKLHGVLRSYDQFANLVLEDTVERIYHGNAFAEHWHGLFLI 69
>gi|255714250|ref|XP_002553407.1| KLTH0D16082p [Lachancea thermotolerans]
gi|238934787|emb|CAR22969.1| KLTH0D16082p [Lachancea thermotolerans CBS 6340]
Length = 81
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
+T LDL K +D+ V VKL G R++TG L+ +D N+VL A E +
Sbjct: 2 DTPLDLLKLNLDEKVFVKLRGAREMTGVLQAFDSHCNIVLSNATETI 48
>gi|401827282|ref|XP_003887733.1| Sm-like protein [Encephalitozoon hellem ATCC 50504]
gi|392998740|gb|AFM98752.1| Sm-like protein [Encephalitozoon hellem ATCC 50504]
Length = 79
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
L+L K+++ V+V++ GR + GT+ D+ +N VLD+ EF R
Sbjct: 3 LNLEKYMNYRVKVRMRDGRWMEGTMMAIDEDVNAVLDDTEEFRR 46
>gi|1401208|gb|AAD05369.1| small nucleolar ribonucleoprotein E homolog [Bigelowiella natans]
Length = 71
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFV 93
K + DL F+++ +Q++L + GTL+G+DQ LN+VL+++ N ++ + V
Sbjct: 4 KINIPDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKSSYSKESNYFDILIV 60
>gi|225711126|gb|ACO11409.1| U6 snRNA-associated Sm-like protein LSm5 [Caligus rogercresseyi]
Length = 93
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 28 LKSLKMSGRKETVLDLAKFVDKGV----QVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+ SL + T+L L + VDK + + + G +++ GTL G+D +N+VL++ EF
Sbjct: 1 MSSLPPAPNPSTILPL-ELVDKAIGSRIHIIMKGDKEIVGTLLGFDDFVNMVLEDVTEF 58
>gi|401423638|ref|XP_003876305.1| putative Lsm7p protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322492547|emb|CBZ27824.1| putative Lsm7p protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 91
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +L L K++D+ + V G +V G LKG+D +NLVL +A + R
Sbjct: 11 KKEGILSLEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADAELWHR 58
>gi|124028416|ref|YP_001013736.1| putative snRNP Sm protein [Hyperthermus butylicus DSM 5456]
gi|123979110|gb|ABM81391.1| putative snRNP Sm protein [Hyperthermus butylicus DSM 5456]
Length = 77
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
VKL G +V G LK YDQ LNLVL++A E
Sbjct: 19 VKLKGANEVRGRLKSYDQHLNLVLEDAEEI 48
>gi|161899457|ref|XP_001712962.1| mRNA splicing factor snRNPG [Bigelowiella natans]
gi|75756457|gb|ABA27350.1| mRNA splicing factor snRNPG [Bigelowiella natans]
Length = 71
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 37 KETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFV 93
K + DL F+++ +Q++L + GTL+G+DQ LN+VL+++ N ++ + V
Sbjct: 4 KINIPDLKLFMEEEIQIQLKNKLCLKGTLRGFDQFLNIVLEKSSYSKESNYFDILIV 60
>gi|303390224|ref|XP_003073343.1| U6 snRNA-associated Sm-like protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302489|gb|ADM11983.1| U6 snRNA-associated Sm-like protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 88
Score = 37.4 bits (85), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 41 LDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
L L K+V+ V+VK+ GR + GT+ D+ +N+VLD++ EF
Sbjct: 3 LSLGKYVNYRVKVKMKDGRWMEGTMLSVDEDVNVVLDDSEEF 44
>gi|116181000|ref|XP_001220349.1| hypothetical protein CHGG_01128 [Chaetomium globosum CBS 148.51]
gi|88185425|gb|EAQ92893.1| hypothetical protein CHGG_01128 [Chaetomium globosum CBS 148.51]
Length = 381
Score = 37.4 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+A +++ ++V L GRQ+TG + +D+ +NLVL + EF R
Sbjct: 10 MAGYINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADTEEFRR 51
>gi|169236227|ref|YP_001689427.1| small nuclear ribonucleoprotein [Halobacterium salinarum R1]
gi|167727293|emb|CAP14079.1| RNA-binding protein Lsm [Halobacterium salinarum R1]
Length = 60
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD-EAVEFLRGN 86
MSGR VL+ + +++ V V+L G + TG L GYDQ +N+V++ E +RG+
Sbjct: 1 MSGRPLDVLE--ESLEETVTVRLKDGDEFTGVLTGYDQHMNVVIEGEDTTIIRGD 53
>gi|145590308|ref|YP_001152310.1| like-Sm ribonucleoprotein, core [Pyrobaculum arsenaticum DSM
13514]
gi|379005411|ref|YP_005261083.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
gi|145282076|gb|ABP49658.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
arsenaticum DSM 13514]
gi|375160864|gb|AFA40476.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
Length = 80
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLY 88
L + K V VKL ++ G L+ +DQ +NL+L++A E + GN++
Sbjct: 16 LQDSIGKQVLVKLRDSHEIRGVLRSFDQHVNLLLEDAEEIIDGNVF 61
>gi|320580108|gb|EFW94331.1| Alpha 4 subunit of the 20S proteasome [Ogataea parapolymorpha
DL-1]
Length = 384
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE--FLRGNLY 88
VD+ V V L GR V G L+ +DQ NLV+ + VE +L G+ Y
Sbjct: 29 VDRKVFVLLRDGRSVIGVLRTFDQFANLVIHDGVERIYLDGSRY 72
>gi|297844878|ref|XP_002890320.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
gi|297336162|gb|EFH66579.1| hypothetical protein ARALYDRAFT_472135 [Arabidopsis lyrata subsp.
lyrata]
Length = 128
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLYNGI 91
LA ++DK + V L GR++ G L+ +DQ N V++EA E + G+LY I
Sbjct: 15 LAAYLDKKLLVLLRDGRKLMGLLRSFDQFANAVIEEAYERVIVGDLYCDI 64
>gi|124484977|ref|YP_001029593.1| hypothetical protein Mlab_0149 [Methanocorpusculum labreanum Z]
gi|124362518|gb|ABN06326.1| Like-Sm ribonucleoprotein, core [Methanocorpusculum labreanum Z]
Length = 75
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
M+ R +LD + V + L GGR++ G L+GYD +NLVLD+A E
Sbjct: 1 MTKRPLEILDQV-LNRQPVIISLKGGREIRGVLQGYDVHMNLVLDKAEE 48
>gi|367001532|ref|XP_003685501.1| hypothetical protein TPHA_0D04330 [Tetrapisispora phaffii CBS
4417]
gi|357523799|emb|CCE63067.1| hypothetical protein TPHA_0D04330 [Tetrapisispora phaffii CBS
4417]
Length = 86
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
+ K +++ V + L R+ TGTL G+D +N+++++AVE++ N
Sbjct: 13 IDKTINQNVWIILQSNREFTGTLIGFDDFVNVIIEDAVEYITRN 56
>gi|257051760|ref|YP_003129593.1| Like-Sm ribonucleoprotein core [Halorhabdus utahensis DSM 12940]
gi|256690523|gb|ACV10860.1| Like-Sm ribonucleoprotein core [Halorhabdus utahensis DSM 12940]
Length = 61
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD--EAVEFLRGN 86
MSG+ VL+ + V V V L GG + G L GYDQ LNLVL E +RG+
Sbjct: 1 MSGQPRDVLE--ETVGSTVTVDLKGGEVLEGELTGYDQHLNLVLSAGEDTTIIRGD 54
>gi|336477290|ref|YP_004616431.1| Sm ribonucleoprotein-like protein [Methanosalsum zhilinae DSM
4017]
gi|335930671|gb|AEH61212.1| Like-Sm ribonucleoprotein core [Methanosalsum zhilinae DSM 4017]
Length = 72
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
M+ R +L+ A ++ V V+L G R+ G L+GYD +NLVLD A E G +
Sbjct: 1 MANRPLDILNNA--LNTPVIVRLKGAREFRGELQGYDVHMNLVLDNAEELKDGEI 53
>gi|355571637|ref|ZP_09042865.1| Like-Sm ribonucleoprotein core [Methanolinea tarda NOBI-1]
gi|354825270|gb|EHF09500.1| Like-Sm ribonucleoprotein core [Methanolinea tarda NOBI-1]
Length = 75
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
V L GGR++ G L+GYD +NLVLD+A E
Sbjct: 20 VSLKGGRELRGVLQGYDVHMNLVLDKAEEI 49
>gi|19112539|ref|NP_595747.1| U6 snRNP-associated protein Lsm3 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|10720084|sp|Q9Y7M4.2|LSM3_SCHPO RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm3
gi|6942158|emb|CAB42366.2| U6 snRNP-associated protein Lsm3 (predicted) [Schizosaccharomyces
pombe]
Length = 93
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LDL + +D+ V VKL G R++ G L YD+ LN+VL +A E +
Sbjct: 11 LDLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEIV 54
>gi|374327713|ref|YP_005085913.1| hypothetical protein P186_2269 [Pyrobaculum sp. 1860]
gi|356642982|gb|AET33661.1| hypothetical protein P186_2269 [Pyrobaculum sp. 1860]
Length = 57
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
VKL ++ G L+ +DQ +NL+L++A E + GN+Y V+V
Sbjct: 3 VKLRDSHEIRGILRSFDQHVNLLLEDAEEIIDGNVYKRGTVVV 45
>gi|357514091|ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
Length = 131
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE-FLRGNLYN----GIFVI 94
LA ++DK + + L GR++ GTL+ +DQ N VL+ A E + G+LY G++VI
Sbjct: 15 LASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVI 71
>gi|340505820|gb|EGR32114.1| small nuclear ribonucleoprotein, putative [Ichthyophthirius
multifiliis]
Length = 85
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGI 91
DL K+ K + V L G R+V G +KG+D +N+VL+ A E + + N I
Sbjct: 17 DLQKYNGKRLLVYLNGKRRVQGVVKGHDNYMNIVLENAQELIGKDKVNNI 66
>gi|340370917|ref|XP_003383992.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like
[Amphimedon queenslandica]
Length = 105
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 35 GRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
G E LDL + +D+ + VK+ R++TG L G+DQ LN+++ E E
Sbjct: 12 GDIEEPLDLVRLSLDERLYVKMRNDRELTGRLHGFDQHLNMIMSEVEE 59
>gi|50310953|ref|XP_455499.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644635|emb|CAG98207.1| KLLA0F09207p [Kluyveromyces lactis]
Length = 95
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD 77
VD V+V+L G ++TGTLK DQ LNL LD
Sbjct: 10 LVDHEVKVELKNGIELTGTLKSVDQFLNLKLD 41
>gi|24655606|ref|NP_647660.1| CG2021 [Drosophila melanogaster]
gi|194747038|ref|XP_001955961.1| GF24963 [Drosophila ananassae]
gi|194864976|ref|XP_001971199.1| GG14562 [Drosophila erecta]
gi|195336718|ref|XP_002034980.1| GM14170 [Drosophila sechellia]
gi|195490564|ref|XP_002093192.1| GE20916 [Drosophila yakuba]
gi|195587050|ref|XP_002083278.1| GD13439 [Drosophila simulans]
gi|7292155|gb|AAF47567.1| CG2021 [Drosophila melanogaster]
gi|68051537|gb|AAY85032.1| IP05684p [Drosophila melanogaster]
gi|190623243|gb|EDV38767.1| GF24963 [Drosophila ananassae]
gi|190652982|gb|EDV50225.1| GG14562 [Drosophila erecta]
gi|194128073|gb|EDW50116.1| GM14170 [Drosophila sechellia]
gi|194179293|gb|EDW92904.1| GE20916 [Drosophila yakuba]
gi|194195287|gb|EDX08863.1| GD13439 [Drosophila simulans]
gi|220951344|gb|ACL88215.1| CG2021-PA [synthetic construct]
Length = 95
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +++ V + GR GTLKG+DQ +N+++DE E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>gi|219129945|ref|XP_002185137.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403316|gb|EEC43269.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 89
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
E LDL + +D+ V VK G R++ G L GYDQ LN++L + E
Sbjct: 2 EEPLDLIRLSIDERVYVKCRGDRELRGKLHGYDQHLNMILGDVEE 46
>gi|288932200|ref|YP_003436260.1| Like-Sm ribonucleoprotein core [Ferroglobus placidus DSM 10642]
gi|288894448|gb|ADC65985.1| Like-Sm ribonucleoprotein core [Ferroglobus placidus DSM 10642]
Length = 73
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNL 87
L K + V V+L GGR+ GTL GYD +NLVL +A E G +
Sbjct: 8 LNKALKTPVLVRLKGGREFRGTLDGYDIHMNLVLVDAEEIQNGEV 52
>gi|167375897|ref|XP_001733767.1| snrnp sm protein [Entamoeba dispar SAW760]
gi|165904941|gb|EDR30063.1| snrnp sm protein, putative [Entamoeba dispar SAW760]
Length = 99
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
E +DL K +D + +KL GGR++ G L+ +DQ LN++L + E
Sbjct: 28 EEPIDLIKLSLDDNIFIKLRGGRKLKGKLRAFDQHLNIILTDVNE 72
>gi|85119473|ref|XP_965639.1| hypothetical protein NCU02508 [Neurospora crassa OR74A]
gi|28927451|gb|EAA36403.1| predicted protein [Neurospora crassa OR74A]
gi|336464924|gb|EGO53164.1| hypothetical protein NEUTE1DRAFT_126545 [Neurospora tetrasperma
FGSC 2508]
gi|350297029|gb|EGZ78006.1| Sm-like ribonucleoprotein [Neurospora tetrasperma FGSC 2509]
Length = 213
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+A +++ ++V L GRQ+TG + +D+ +NLVL +A EF R
Sbjct: 10 MAGYINYRMRVTLNDGRQMTGQMLAFDKHMNLVLADAEEFRR 51
>gi|403160315|ref|XP_003890597.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169505|gb|EHS63902.1| hypothetical protein PGTG_20884 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 149
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 48 DKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
DK V V GR +TG LKG+DQ N++L ++VE
Sbjct: 63 DKRVLVITQDGRTITGELKGFDQTTNIILSDSVE 96
>gi|159479600|ref|XP_001697878.1| Sm protein [Chlamydomonas reinhardtii]
gi|158273976|gb|EDO99761.1| Sm protein [Chlamydomonas reinhardtii]
Length = 97
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LDL + +D+ + VKL G R++ G L YDQ LN++L E E L
Sbjct: 14 LDLIRLSLDERIYVKLRGERELRGRLHAYDQHLNMILGEVEETL 57
>gi|115383876|ref|XP_001208485.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
gi|114196177|gb|EAU37877.1| hypothetical protein ATEG_01120 [Aspergillus terreus NIH2624]
Length = 171
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 39 TVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL-RGNLY----NGIFV 93
T L DK + + L GR++ G L+ +DQ NLVL + +E + GNLY GIF+
Sbjct: 43 TAAQLLDLTDKKLVLVLRDGRKLIGVLRSWDQFANLVLQDTIERMYAGNLYADIPRGIFL 102
Query: 94 I 94
+
Sbjct: 103 V 103
>gi|409721748|ref|ZP_11269904.1| Sm ribonucleoprotein-like protein [Halococcus hamelinensis 100A6]
gi|448721880|ref|ZP_21704423.1| Sm ribonucleoprotein-like protein [Halococcus hamelinensis 100A6]
gi|445790952|gb|EMA41602.1| Sm ribonucleoprotein-like protein [Halococcus hamelinensis 100A6]
Length = 74
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
MSGR VL+ A D+ V V+L G G L GYDQ +N+VLD A E
Sbjct: 1 MSGRPLDVLE-ATLGDR-VTVRLKDGAAYAGELGGYDQHMNVVLDPAEE 47
>gi|119630086|gb|EAX09681.1| hCG1812837 [Homo sapiens]
Length = 56
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNGIFVIV 95
+K GGR V G L G D +NLV+DE VE N I +V
Sbjct: 1 MKCNGGRHVQGILWGLDPFMNLVIDECVEMSTSWQQNSIGTVV 43
>gi|91087977|ref|XP_973274.1| PREDICTED: similar to LSM Sm-like protein family member
[Tribolium castaneum]
gi|270011905|gb|EFA08353.1| hypothetical protein TcasGA2_TC005996 [Tribolium castaneum]
Length = 101
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LDL + +D+ + VK+ R++ G L YDQ +N++L +A E +
Sbjct: 17 LDLVRLSLDERIYVKMRNDREIRGRLHAYDQHMNMILSDAEETI 60
>gi|307206257|gb|EFN84322.1| U6 snRNA-associated Sm-like protein LSm3 [Harpegnathos saltator]
Length = 96
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
LDL + +D+ + VK+ R++ G L YDQ LN+VL EA E
Sbjct: 10 LDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEE 51
>gi|302309894|ref|XP_002999599.1| hypothetical protein [Candida glabrata CBS 138]
gi|196049204|emb|CAR58072.1| unnamed protein product [Candida glabrata]
Length = 85
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 39 TVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
T LDL K +D+ V VKL G R + G L+ +D N+VL +AVE +
Sbjct: 5 TPLDLLKLNLDERVYVKLRGARAMEGVLQAFDSHCNIVLSDAVETI 50
>gi|448611893|ref|ZP_21662323.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mucosum ATCC BAA-1512]
gi|445742654|gb|ELZ94148.1| small nuclear ribonucleoprotein (snRNP)-like protein [Haloferax
mucosum ATCC BAA-1512]
Length = 76
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
MSGR VL+ + +D+ V V L G G L GYDQ +N+VL+EA++
Sbjct: 1 MSGRPLDVLEAS--LDEPVTVLLKDGNAYYGVLAGYDQHMNVVLEEALD 47
>gi|302855073|ref|XP_002959037.1| hypothetical protein VOLCADRAFT_108433 [Volvox carteri f.
nagariensis]
gi|300255603|gb|EFJ39898.1| hypothetical protein VOLCADRAFT_108433 [Volvox carteri f.
nagariensis]
Length = 97
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LDL + +D+ + VKL G R++ G L YDQ LN++L E E L
Sbjct: 14 LDLIRLSLDERIYVKLRGERELRGRLHAYDQHLNMILGEVEETL 57
>gi|157870915|ref|XP_001684007.1| putative Lsm7p protein [Leishmania major strain Friedlin]
gi|68127075|emb|CAJ04433.1| putative Lsm7p protein [Leishmania major strain Friedlin]
Length = 91
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
+KE +L L K++D+ + V G +V G LKG+D +NLVL +A + R
Sbjct: 11 KKEGILSLEKYLDRKIVVS-QKGHEVHGVLKGFDNNVNLVLADAELWHR 58
>gi|300120504|emb|CBK20058.2| Like-Sm ribonucleoprotein, core [Blastocystis hominis]
Length = 458
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 27 FLKSLKMSGRKETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+ SL MS DL + +D+ V +K GR++ G L YDQ LN+V+ A E
Sbjct: 361 YTNSLYMSSSVSQPFDLIRLSLDEEVVIKCRHGREIRGKLLAYDQHLNMVVSNAKE 416
>gi|195125357|ref|XP_002007145.1| GI12774 [Drosophila mojavensis]
gi|193918754|gb|EDW17621.1| GI12774 [Drosophila mojavensis]
Length = 95
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +++ V + GR GTLKG+DQ +N+++DE E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>gi|412991139|emb|CCO15984.1| predicted protein [Bathycoccus prasinos]
Length = 97
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 44 AKFVDKGVQVKL-----TGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++ VDK V K+ G ++ TGTLKG+D +N VL++A+E+ R
Sbjct: 20 SELVDKCVNEKVWIIMKNGHKEFTGTLKGFDVYVNCVLEDAIEYDR 65
>gi|392575745|gb|EIW68877.1| hypothetical protein TREMEDRAFT_39244 [Tremella mesenterica DSM
1558]
Length = 94
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 46 FVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+VD VQV L GR + G L+GYD NL+L + VE
Sbjct: 7 YVDHTVQVILYDGRVIVGKLRGYDPRTNLILSDCVE 42
>gi|297841127|ref|XP_002888445.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
gi|297334286|gb|EFH64704.1| hypothetical protein ARALYDRAFT_315605 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L V++ + V GR + G LKG+DQ N++LDE+ E
Sbjct: 499 LEDLVNQIISVITNDGRNIVGVLKGFDQATNIILDESHE 537
>gi|195403403|ref|XP_002060279.1| GJ16072 [Drosophila virilis]
gi|194140618|gb|EDW57092.1| GJ16072 [Drosophila virilis]
Length = 95
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +++ V + GR GTLKG+DQ +N+++DE E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>gi|145592526|ref|YP_001154528.1| like-Sm ribonucleoprotein, core [Pyrobaculum arsenaticum DSM
13514]
gi|379005495|ref|YP_005261167.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
gi|145284294|gb|ABP51876.1| Small nuclear ribonucleoprotein, LSM family [Pyrobaculum
arsenaticum DSM 13514]
gi|375160948|gb|AFA40560.1| Small nuclear ribonucleoprotein-like (snRNP) [Pyrobaculum
oguniense TE7]
Length = 86
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
L K ++K + KL GG + G L YD +NLVLD A E
Sbjct: 17 LTKMLNKEIVAKLKGGVAIKGVLTAYDGCMNLVLDSAAEL 56
>gi|195435808|ref|XP_002065871.1| GK20525 [Drosophila willistoni]
gi|194161956|gb|EDW76857.1| GK20525 [Drosophila willistoni]
Length = 95
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +++ V + GR GTLKG+DQ +N+++DE E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>gi|392512800|emb|CCI73964.1| ECU08_0545 [Encephalitozoon cuniculi GB-M1]
Length = 79
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
L K++D V+V++ GR + GT+ D+ +N+VLD+ EF +
Sbjct: 5 LTKYIDYRVKVRMRDGRWMEGTMLAVDEDVNVVLDDCEEFRKA 47
>gi|452824963|gb|EME31962.1| U6 snRNA-associated Sm-like protein LSm8 [Galdieria sulphuraria]
Length = 95
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGN 86
L+ +VDK V V GR + G LKG+DQ N++L+ VE + G
Sbjct: 4 LSSYVDKTVSVVTNDGRILIGILKGFDQSCNVILESTVERIFGT 47
>gi|70950373|ref|XP_744515.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524501|emb|CAH78948.1| hypothetical protein PC001427.02.0 [Plasmodium chabaudi chabaudi]
Length = 60
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 53 VKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG-NLYNGIFVI 94
V L G R + G L+GYD +NLVLD VE + N+ GI VI
Sbjct: 1 VYLNGNRLIVGVLRGYDTFMNLVLDNTVEIKKDENIEIGIVVI 43
>gi|380093645|emb|CCC08609.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 253
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 51 VQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR 84
++V L GRQ+TG + +D+ +NLVL +A EF R
Sbjct: 1 MRVTLNDGRQMTGQMLAFDKHMNLVLADAEEFRR 34
>gi|383857174|ref|XP_003704080.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
[Megachile rotundata]
Length = 103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
LDL + +D+ + VK+ R++ G L YDQ LN+VL EA E
Sbjct: 17 LDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEE 58
>gi|392571535|gb|EIW64707.1| Sm-like ribonucleo protein [Trametes versicolor FP-101664 SS1]
Length = 136
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 47 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-----GNLYNGIFVI 94
VD+ + V L GR++ G L+ YDQ NLVL++ VE + ++ G+F+I
Sbjct: 17 VDRKMLVLLRDGRKLQGVLRSYDQFANLVLEDTVERIYHQDVFAEMWRGLFLI 69
>gi|195011534|ref|XP_001983196.1| GH15765 [Drosophila grimshawi]
gi|193896678|gb|EDV95544.1| GH15765 [Drosophila grimshawi]
Length = 95
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L +++ V + GR GTLKG+DQ +N+++DE E
Sbjct: 4 LESYINHTVSIITADGRNFIGTLKGFDQTINIIIDECHE 42
>gi|386875009|ref|ZP_10117213.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
gi|386807169|gb|EIJ66584.1| LSM domain protein [Candidatus Nitrosopumilus salaria BD31]
Length = 74
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
L + +D+ V +KL G + + GTL G+DQ +NL+LD + E
Sbjct: 6 LDESIDQVVLIKLKGSKTIRGTLLGFDQHMNLLLDSSEEI 45
>gi|378754575|gb|EHY64606.1| hypothetical protein NERG_02416 [Nematocida sp. 1 ERTm2]
Length = 109
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 34 SGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+G K T L + +++DK + V + G+ + GTL+ YDQ N++L+++ E+
Sbjct: 6 TGSKGTRL-MEEYLDKPIFVVMRDGKYMVGTLRSYDQYYNILLEDSTEY 53
>gi|339248315|ref|XP_003375791.1| putative LSM domain protein [Trichinella spiralis]
gi|316970790|gb|EFV54665.1| putative LSM domain protein [Trichinella spiralis]
Length = 184
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
L F++K V + GR + G +KG+DQ +NLVL+++ E
Sbjct: 92 LEPFLEKLVSIITGDGRHIVGIMKGFDQTINLVLEDSHE 130
>gi|296424977|ref|XP_002842020.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638277|emb|CAZ86211.1| unnamed protein product [Tuber melanosporum]
Length = 99
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
+L FV+K V + + GR +TG L G+DQ NL+L +E
Sbjct: 3 NLQTFVNKTVTIITSDGRTLTGKLMGHDQTTNLILSRTIE 42
>gi|67484430|ref|XP_657435.1| U6 snRNA-associated Sm-like protein LSm3 [Entamoeba histolytica
HM-1:IMSS]
gi|56474688|gb|EAL52049.1| U6 snRNA-associated Sm-like protein LSm3, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449702203|gb|EMD42886.1| U6 snrnaassociated Sm family LSm3 protein [Entamoeba histolytica
KU27]
Length = 78
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
E +DL K +D V +KL GGR++ G L+ +DQ LN++L E
Sbjct: 7 EEPIDLIKLSLDDNVFIKLRGGRKLKGKLRAFDQHLNIILTNVSEM 52
>gi|15897658|ref|NP_342263.1| small nuclear riboprotein (snRNP-2) [Sulfolobus solfataricus P2]
gi|13813927|gb|AAK41053.1| Small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus P2]
Length = 79
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
LA+ ++ V VKL G ++V G L+ YDQ +NLVL ++ E
Sbjct: 12 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEI 51
>gi|15790491|ref|NP_280315.1| snRNP-like protein [Halobacterium sp. NRC-1]
gi|10580991|gb|AAG19795.1| snRNP homolog [Halobacterium sp. NRC-1]
Length = 69
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD-EAVEFLRGN 86
MSGR VL+ + +++ V V+L G + TG L GYDQ +N+V++ E +RG+
Sbjct: 10 MSGRPLDVLE--ESLEETVTVRLKDGDEFTGVLTGYDQHMNVVIEGEDTTIIRGD 62
>gi|384494127|gb|EIE84618.1| hypothetical protein RO3G_09328 [Rhizopus delemar RA 99-880]
Length = 125
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE--FLR---GNLYNGIFVI 94
L +DK + V L GR++ G L+ +DQ NLVL + +E ++R G++ G+F+I
Sbjct: 15 LIDSIDKKLMVVLRDGRKLIGILRSFDQFANLVLQDTIERIYVRGCYGDIPRGVFLI 71
>gi|300711196|ref|YP_003737010.1| snRNP-like protein [Halalkalicoccus jeotgali B3]
gi|448296703|ref|ZP_21486756.1| snRNP-like protein [Halalkalicoccus jeotgali B3]
gi|299124879|gb|ADJ15218.1| snRNP-like protein [Halalkalicoccus jeotgali B3]
gi|445580835|gb|ELY35205.1| snRNP-like protein [Halalkalicoccus jeotgali B3]
Length = 61
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVL--DEAVEFLRGN 86
MSGR VL+ A + V V+L G + GTL GYDQ +N+V+ D+ +RG+
Sbjct: 1 MSGRPLDVLEAA--IGDIVTVQLKDGEEFVGTLTGYDQHMNVVVEDDDNTTIIRGD 54
>gi|110755468|ref|XP_001121255.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like [Apis
mellifera]
gi|340729056|ref|XP_003402825.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform
1 [Bombus terrestris]
gi|340729058|ref|XP_003402826.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm3-like isoform
2 [Bombus terrestris]
gi|350401475|ref|XP_003486164.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Bombus
impatiens]
gi|380013750|ref|XP_003690912.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Apis
florea]
Length = 103
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
LDL + +D+ + VK+ R++ G L YDQ LN+VL EA E
Sbjct: 17 LDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEE 58
>gi|148642242|ref|YP_001272755.1| small nuclear ribonucleoprotein [Methanobrevibacter smithii ATCC
35061]
gi|222444586|ref|ZP_03607101.1| hypothetical protein METSMIALI_00198 [Methanobrevibacter smithii
DSM 2375]
gi|261350875|ref|ZP_05976292.1| like-Sm ribonucleoprotein, core [Methanobrevibacter smithii DSM
2374]
gi|148551259|gb|ABQ86387.1| snRNP Sm-like protein [Methanobrevibacter smithii ATCC 35061]
gi|222434151|gb|EEE41316.1| LSM domain protein [Methanobrevibacter smithii DSM 2375]
gi|288860212|gb|EFC92510.1| like-Sm ribonucleoprotein, core [Methanobrevibacter smithii DSM
2374]
Length = 76
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 33 MSGRK-ETVLD-LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRGNLYNG 90
MSG+ + LD L K V+ V +KL G R+ G LK +D +NLVL++A E G +
Sbjct: 1 MSGQNVQRPLDALGKSVNSPVLIKLKGDREFRGILKSFDLHMNLVLNDAEELQDGEVTRR 60
Query: 91 IFVIV 95
+ V++
Sbjct: 61 LGVVL 65
>gi|384252623|gb|EIE26099.1| Sm-like ribonucleo protein [Coccomyxa subellipsoidea C-169]
Length = 95
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
LDL + +D+ + VKL G R++ G L YDQ LN++L E E
Sbjct: 12 LDLIRLSLDERIYVKLRGDRELRGRLHAYDQHLNMILGEVEE 53
>gi|385805901|ref|YP_005842299.1| putative snRNP Sm protein [Fervidicoccus fontis Kam940]
gi|383795764|gb|AFH42847.1| putative snRNP Sm protein [Fervidicoccus fontis Kam940]
Length = 76
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
L+ + + V VKL G ++V G LK YD LN+VL++A E
Sbjct: 9 LSSSMGQTVLVKLKGNKEVRGKLKSYDHHLNIVLEDAEEL 48
>gi|146304997|ref|YP_001192313.1| Sm ribonucleoprotein-like protein [Metallosphaera sedula DSM
5348]
gi|145703247|gb|ABP96389.1| Small nuclear ribonucleoprotein, LSM family [Metallosphaera
sedula DSM 5348]
Length = 75
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
LA+ V V VKL G ++V G LK YDQ +NLVL ++ E
Sbjct: 9 LAESVGSLVLVKLKGNKEVRGLLKSYDQHMNLVLSDSEEI 48
>gi|448738899|ref|ZP_21720920.1| Like-Sm ribonucleoprotein core [Halococcus thailandensis JCM
13552]
gi|445801285|gb|EMA51629.1| Like-Sm ribonucleoprotein core [Halococcus thailandensis JCM
13552]
Length = 78
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
MSGR VL+ A D GV V+L G TG L GYDQ LN+VL+ A
Sbjct: 1 MSGRPLDVLE-ANLGD-GVAVRLKDGVTYTGELGGYDQHLNVVLEPA 45
>gi|242021605|ref|XP_002431235.1| lsm1, putative [Pediculus humanus corporis]
gi|212516484|gb|EEB18497.1| lsm1, putative [Pediculus humanus corporis]
Length = 139
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLR-----GNLYNGIFVI 94
L + +DK + V L GR + G L+ DQ NLVL + +E + G++Y G+F++
Sbjct: 15 LVEELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHKTIERIHVGKEYGDIYRGVFIV 71
>gi|407038130|gb|EKE38950.1| LSM domain containing protein [Entamoeba nuttalli P19]
Length = 78
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 38 ETVLDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
E +DL K +D V +KL GGR++ G L+ +DQ LN++L E
Sbjct: 7 EEPIDLIKLSLDDNVFIKLRGGRKLKGKLRAFDQHLNIILTNVSEI 52
>gi|328769008|gb|EGF79053.1| hypothetical protein BATDEDRAFT_90185 [Batrachochytrium
dendrobatidis JAM81]
Length = 105
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
LDL + +D+ + VK+ G R++ G L YDQ +N+VL E E
Sbjct: 22 LDLVRLSLDERIYVKMRGDRELRGKLHAYDQHMNMVLGEVEE 63
>gi|448578387|ref|ZP_21643822.1| snRNP-like protein [Haloferax larsenii JCM 13917]
gi|448592536|ref|ZP_21651643.1| snRNP-like protein [Haloferax elongans ATCC BAA-1513]
gi|445726928|gb|ELZ78544.1| snRNP-like protein [Haloferax larsenii JCM 13917]
gi|445731541|gb|ELZ83125.1| snRNP-like protein [Haloferax elongans ATCC BAA-1513]
Length = 75
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 33 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
MSGR VL+ + +D+ V V L G G L GYDQ +N+VL+E+++
Sbjct: 1 MSGRPLDVLE--ESLDEPVTVTLKDGSAYYGVLAGYDQHMNVVLEESLD 47
>gi|325968287|ref|YP_004244479.1| Sm ribonucleoprotein-like protein [Vulcanisaeta moutnovskia
768-28]
gi|323707490|gb|ADY00977.1| Like-Sm ribonucleoprotein core [Vulcanisaeta moutnovskia 768-28]
Length = 72
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 42 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF-LRGNLYNGIFVI 94
+L K ++K + VKL G ++ G L GYDQ LNL+L E +G + +G+ +I
Sbjct: 7 ELQKNLNKVILVKLRNGTEIRGVLVGYDQHLNLLLTNTEEINPKGGVKSGLMII 60
>gi|255719860|ref|XP_002556210.1| KLTH0H07612p [Lachancea thermotolerans]
gi|238942176|emb|CAR30348.1| KLTH0H07612p [Lachancea thermotolerans CBS 6340]
Length = 81
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
+ K V + V V LT R+ GTL GYD +N+VL++ +E+
Sbjct: 12 IDKTVGQPVWVMLTSHREFAGTLVGYDDFVNVVLEDVIEY 51
>gi|284174982|ref|ZP_06388951.1| small nuclear riboprotein protein (snRNP-2) [Sulfolobus
solfataricus 98/2]
gi|384434272|ref|YP_005643630.1| Sm ribonucleoprotein-like protein [Sulfolobus solfataricus 98/2]
gi|261602426|gb|ACX92029.1| Like-Sm ribonucleoprotein core [Sulfolobus solfataricus 98/2]
Length = 76
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
LA+ ++ V VKL G ++V G L+ YDQ +NLVL ++ E
Sbjct: 9 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEI 48
>gi|303288678|ref|XP_003063627.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454695|gb|EEH52000.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 95
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVL 76
LDL + +D+ V VKL G R++ G L YDQ LN++L
Sbjct: 12 LDLIRLSLDERVYVKLRGDREIRGKLHAYDQHLNMIL 48
>gi|71041581|pdb|1TH7|A Chain A, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041582|pdb|1TH7|B Chain B, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041583|pdb|1TH7|C Chain C, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041584|pdb|1TH7|D Chain D, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041585|pdb|1TH7|E Chain E, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041586|pdb|1TH7|F Chain F, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041587|pdb|1TH7|G Chain G, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041588|pdb|1TH7|H Chain H, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041589|pdb|1TH7|I Chain I, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041590|pdb|1TH7|J Chain J, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041591|pdb|1TH7|K Chain K, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041592|pdb|1TH7|L Chain L, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041593|pdb|1TH7|M Chain M, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
gi|71041594|pdb|1TH7|N Chain N, Crystal Structure Of An Archaeal Sm Protein From
Sulfolobus Solfataricus
Length = 81
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
LA+ ++ V VKL G ++V G L+ YDQ +NLVL ++ E
Sbjct: 14 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEI 53
>gi|254166962|ref|ZP_04873815.1| hypothetical protein ABOONEI_370 [Aciduliprofundum boonei T469]
gi|289597064|ref|YP_003483760.1| Like-Sm ribonucleoprotein core [Aciduliprofundum boonei T469]
gi|197623818|gb|EDY36380.1| hypothetical protein ABOONEI_370 [Aciduliprofundum boonei T469]
gi|289534851|gb|ADD09198.1| Like-Sm ribonucleoprotein core [Aciduliprofundum boonei T469]
Length = 75
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 43 LAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRG 85
L + ++K V V + G ++ G L GYDQ LNLVL E + G
Sbjct: 11 LHESLNKPVLVAMKGNKEYRGVLDGYDQHLNLVLKNVEEIING 53
>gi|145356505|ref|XP_001422469.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582712|gb|ABP00786.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 97
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFL 83
LDL + +D+ V VKL G R+ G L YDQ LN++L + E +
Sbjct: 14 LDLIRLALDEKVYVKLRGDREARGRLHAYDQHLNMILGDVEEVI 57
>gi|342181229|emb|CCC90708.1| putative U6 snRNA-associated Sm-like protein LSm7p [Trypanosoma
congolense IL3000]
Length = 167
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 36 RKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEA 79
+KE++L L +D+ V V L R+V G LKG+D +NLVL A
Sbjct: 86 KKESILSLEAHLDRRVVVSLED-REVHGVLKGFDNNINLVLANA 128
>gi|430813883|emb|CCJ28802.1| unnamed protein product [Pneumocystis jirovecii]
Length = 97
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 41 LDLAKF-VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVE 81
LDL + +D+ V VKL G R++ G L YD LN+VL + E
Sbjct: 17 LDLVRLSLDERVYVKLRGDREIKGRLHAYDSHLNMVLSDVEE 58
>gi|340508672|gb|EGR34332.1| hypothetical protein IMG5_016230 [Ichthyophthirius multifiliis]
Length = 1010
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 31 LKMSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEF 82
LK R+ +++D V+V + GR + GT +D+ LNLV+ E EF
Sbjct: 826 LKTDTRQSRRSKFIQWIDYRVRVTILDGRMLVGTFLAFDKHLNLVISETEEF 877
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.331 0.146 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,330,902,466
Number of Sequences: 23463169
Number of extensions: 44381088
Number of successful extensions: 146271
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 144949
Number of HSP's gapped (non-prelim): 1527
length of query: 102
length of database: 8,064,228,071
effective HSP length: 71
effective length of query: 31
effective length of database: 6,398,343,072
effective search space: 198348635232
effective search space used: 198348635232
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 69 (31.2 bits)