BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034183
(102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DFH5|SH3Y1_XENLA SH3 domain-containing YSC84-like protein 1 OS=Xenopus laevis
GN=sh3yl1 PE=2 SV=1
Length = 335
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 2 HFSFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEEN 61
+ + G + A G +GR E DV + AA YTY S+G F G SLEGS + R E N
Sbjct: 119 NLTLGGNFTVAVGPLGRNLEGDV--AIRSSAAVYTYCKSRGLFAGISLEGSGLIERKETN 176
Query: 62 SRFYGNPSICASAILLGSLPRPPAAAILYHALSDLFEKVE 101
+FYG I A IL G + RP A LY L EK E
Sbjct: 177 RKFYGQDDIRAYEILFGEIFRPTEAKELYEILDSFTEKYE 216
>sp|Q9URW6|YIE2_SCHPO SH3 domain-containing protein PJ696.02 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAPJ696.02 PE=1 SV=1
Length = 430
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 3 FSFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEENS 62
+ G LS AAG +GR AE A VGG A ++YS +KG F G SLEGS++ R + N
Sbjct: 122 ITLGGNLSIAAGPLGRNAEAGGGASVGGMAPMFSYSKTKGLFAGVSLEGSVLVERRDANR 181
Query: 63 RFYGNPSICASAILLGSLPRPPAAAILYHALSDLFEKVER 102
Y I A +L G + +P AA LY L+ + R
Sbjct: 182 SLYRG-DITAKRLLSGQVAQPAAADPLYRVLNSKIFNLNR 220
>sp|Q96HL8|SH3Y1_HUMAN SH3 domain-containing YSC84-like protein 1 OS=Homo sapiens
GN=SH3YL1 PE=1 SV=1
Length = 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 2 HFSFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEEN 61
+ + G L+ A G +GR E +V + AA +TY S+G F G SLEGS + R E N
Sbjct: 119 NLTLGGNLTVAVGPLGRNLEGNV--ALRSSAAVFTYCKSRGLFAGVSLEGSCLIERKETN 176
Query: 62 SRFYGNPSICASAILLGSLPRPPAAAILYHALSDLFEKVE 101
+FY I A IL G PRP A LY L EK E
Sbjct: 177 RKFYCQ-DIRAYDILFGDTPRPAQAEDLYEILDSFTEKYE 215
>sp|Q5RAQ2|SH3Y1_PONAB SH3 domain-containing YSC84-like protein 1 OS=Pongo abelii
GN=SH3YL1 PE=2 SV=1
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 2 HFSFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEEN 61
+ + G L+ A G +GR E +V + AA +TY S+G F G SLEGS + R E N
Sbjct: 119 NLTLGGNLTVAVGPLGRNLEGNV--ALRNSAAVFTYCKSRGLFAGVSLEGSCLIERKETN 176
Query: 62 SRFYGNPSICASAILLGSLPRPPAAAILYHALSDLFEKVE 101
+FY I A IL G PRP A LY L EK E
Sbjct: 177 RKFYCQ-DIRAYDILFGDTPRPAQAEDLYEILDSFTEKYE 215
>sp|Q3SZ01|SH3Y1_BOVIN SH3 domain-containing YSC84-like protein 1 OS=Bos taurus GN=SH3YL1
PE=2 SV=1
Length = 341
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 2 HFSFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEEN 61
+ + G L+ A G +GR E +V + AA +TY S+G F G SLEGS + R E N
Sbjct: 119 NLTLGGNLTVAVGPLGRNLEGNV--SLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETN 176
Query: 62 SRFYGNPSICASAILLGSLPRPPAAAILYHALSDLFEKVE 101
+FY I A IL G + RP A LY L EK E
Sbjct: 177 RKFYCQ-DIRAYDILFGDITRPAQAEDLYEVLDSFTEKYE 215
>sp|O08641|SH3Y1_MOUSE SH3 domain-containing YSC84-like protein 1 OS=Mus musculus
GN=Sh3yl1 PE=1 SV=1
Length = 340
Score = 62.4 bits (150), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 2 HFSFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEEN 61
+ + G + A G +GR E +V + AA +TY S+G F G SLEGS + R E N
Sbjct: 119 NLTLGGNFTVAVGPLGRNLEGNV--SLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETN 176
Query: 62 SRFYGNPSICASAILLGSLPRPPAAAILYHALSDLFEKVE 101
+FY I A IL G +P+P A LY L+ EK E
Sbjct: 177 RKFYCQ-DIRAYDILFGDVPQPAQAEDLYEILNSFTEKYE 215
>sp|B0BNA1|SH3Y1_RAT SH3 domain-containing YSC84-like protein 1 OS=Rattus norvegicus
GN=Sh3yl1 PE=2 SV=1
Length = 340
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 2 HFSFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEEN 61
+ + G + A G +GR E +V + AA +TY S+G F G SLEGS + R E N
Sbjct: 119 NLTLGGNFTVAVGPLGRNLEGNV--SLRSSAAVFTYCKSRGLFAGISLEGSCLIERKETN 176
Query: 62 SRFYGNPSICASAILLGSLPRPPAAAILYHALSDLFEKVE 101
+FY I A IL G +P+P A LY L+ EK E
Sbjct: 177 RKFYCQ-DIRAYDILFGDVPQPAQAEDLYEILNSFTEKYE 215
>sp|P32793|YSC84_YEAST Protein YSC84 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=YSC84 PE=1 SV=2
Length = 468
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 4 SFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEENSR 63
+ G +S +AG +GR+AE A GG +A + YS SKG F G S+EGS + R E N +
Sbjct: 123 TLGGNVSVSAGPLGRSAEAAASASTGGVSAVFAYSKSKGLFAGVSVEGSAILERREANRK 182
Query: 64 FYGNPSICASAILLGSLPRPPAAAILYHAL 93
FYG+ + + IL G + PPAA L L
Sbjct: 183 FYGD-NCTSKMILSGRVKVPPAADPLLRIL 211
>sp|P43603|LSB3_YEAST LAS seventeen-binding protein 3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=LSB3 PE=1 SV=3
Length = 459
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 4 SFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEENSR 63
+ G +S +AG +GR+AE A GG AA + YS SKG F G S+EGS + R E N +
Sbjct: 123 TLGGNVSVSAGPLGRSAEAAASASAGGVAAVFAYSKSKGLFAGVSVEGSAIIERREANRK 182
Query: 64 FYGNPSICASAILLGSLPRPPAAAILYHAL 93
FYG+ + A IL G + PPA L+ L
Sbjct: 183 FYGD-NCTAKMILSGRIRPPPAVDPLFRVL 211
>sp|A7A261|LSB3_YEAS7 LAS seventeen-binding protein 3 OS=Saccharomyces cerevisiae (strain
YJM789) GN=LSB3 PE=3 SV=2
Length = 459
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 4 SFGAGLSAAAGIVGRAAEVDVRAGVGGYAACYTYSCSKGAFVGCSLEGSIVATRAEENSR 63
+ G +S +AG +GR+AE A GG AA + YS SKG F G S+EGS + R E N +
Sbjct: 123 TLGGNVSVSAGPLGRSAEAAASASAGGVAAVFAYSKSKGLFAGVSVEGSAIIERREANRK 182
Query: 64 FYGNPSICASAILLGSLPRPPAAAILYHAL 93
FYG+ + A IL G + PPA L+ L
Sbjct: 183 FYGD-NCTAKMILSGRIRPPPAVDPLFRVL 211
>sp|Q3AE81|ADEC2_CARHZ Adenine deaminase 2 OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=ade2 PE=3 SV=1
Length = 570
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 29 GGYAACYTYSCSKGAFVGCSLEGSIVATRAEENSRFYGNPSICASAILLGSLPRPPAAAI 88
G A+ + G S E I A EE R G ++ A +LGSLP P A +
Sbjct: 448 GAIASTVAHDSHNLVVAGMSDEDIIAA--VEELKRIGGGLTVVADGQVLGSLPLPIAGLM 505
Query: 89 LYHALSDLFEKVER 102
L ++ E++E+
Sbjct: 506 SDRTLYEVQEELEK 519
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,335,469
Number of Sequences: 539616
Number of extensions: 1380411
Number of successful extensions: 3128
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3112
Number of HSP's gapped (non-prelim): 14
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)