Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>034184
MDNSLPQTKDVDLSDENVDKACLSVSRAVPEPGASVVHMTVDQVNLQPIGDGEWSDIQAT
EARIADVREVAPETEGSSLDIPVVSPPVNNHHEQGTNSFHQP

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034184
        (102 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2052831 - symbol:SWAP70 species:3702 "Arabidop...   263  4.4e-22   1


>TAIR|locus:2052831 [details] [associations]
            symbol:SWAP70 species:3702 "Arabidopsis thaliana"
            [GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0007165 "signal transduction"
            evidence=ISS] [GO:0035091 "phosphatidylinositol binding"
            evidence=ISS] [GO:0009505 "plant-type cell wall" evidence=IDA]
            Pfam:PF00169 InterPro:IPR001849 PROSITE:PS50003 SMART:SM00233
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005543
            Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0009505 UniGene:At.58604
            EMBL:AY070724 EMBL:AY143965 IPI:IPI00547804 RefSeq:NP_850155.1
            UniGene:At.71016 UniGene:At.71415 ProteinModelPortal:Q8VYJ6
            SMR:Q8VYJ6 IntAct:Q8VYJ6 PRIDE:Q8VYJ6 EnsemblPlants:AT2G30880.1
            GeneID:817638 KEGG:ath:AT2G30880 TAIR:At2g30880
            HOGENOM:HOG000030854 InParanoid:Q8VYJ6 OMA:TPQKKDY PhylomeDB:Q8VYJ6
            ProtClustDB:CLSN2679936 Genevestigator:Q8VYJ6 Uniprot:Q8VYJ6
        Length = 504

 Score = 263 (97.6 bits), Expect = 4.4e-22, P = 4.4e-22
 Identities = 59/106 (55%), Positives = 78/106 (73%)

Query:     4 SLPQTKDVDLSDENVDKACLSVSRAVPEPGASVVHMTVDQV-NLQP-IGDGEWSDIQATE 61
             SLP TK+   +++NVDKACLS+SR    PG +VVHM+ +QV N QP +G+ EW+DIQATE
Sbjct:   402 SLPMTKE---TEKNVDKACLSISRTASIPGENVVHMSEEQVVNAQPPVGENEWNDIQATE 458

Query:    62 ARIADVREVAPETEG---SSLDIPVVSPPVN-NHHEQGTNSFH-QP 102
             AR++DVRE++ ETE    +SLDIPVVSP  N   ++  + SFH QP
Sbjct:   459 ARVSDVREISAETERDRRNSLDIPVVSPEPNVPRNDPPSESFHHQP 504


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.127   0.366    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102       102   0.00091  102 3  11 23  0.37    31
                                                     29  0.48    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  544 (58 KB)
  Total size of DFA:  118 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.36u 0.17s 11.53t   Elapsed:  00:00:00
  Total cpu time:  11.36u 0.17s 11.53t   Elapsed:  00:00:00
  Start:  Fri May 10 17:04:23 2013   End:  Fri May 10 17:04:23 2013

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