Your job contains 1 sequence.
>034187
MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFY
NLSKGHPHYEEPPRYEYLHIRNKEFPWGMFPYPCKLVFVKPC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034187
(102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2137554 - symbol:AT4G37830 species:3702 "Arabi... 307 2.2e-27 1
FB|FBgn0050093 - symbol:CG30093 species:7227 "Drosophila ... 109 2.1e-06 1
FB|FBgn0034877 - symbol:levy "levy" species:7227 "Drosoph... 105 5.5e-06 1
ZFIN|ZDB-GENE-030131-7715 - symbol:cox6a1 "cytochrome c o... 105 5.5e-06 1
UNIPROTKB|E1C3B2 - symbol:COX6A1 "Cytochrome c oxidase su... 96 5.0e-05 1
MGI|MGI:103099 - symbol:Cox6a1 "cytochrome c oxidase subu... 96 5.0e-05 1
WB|WBGene00006519 - symbol:tag-174 species:6239 "Caenorha... 96 5.0e-05 1
UNIPROTKB|J9P8X9 - symbol:LOC477508 "Cytochrome c oxidase... 98 9.1e-05 1
UNIPROTKB|F1RJI7 - symbol:COX6A1 "Cytochrome c oxidase su... 93 0.00010 1
UNIPROTKB|Q02221 - symbol:COX6A2 "Cytochrome c oxidase su... 92 0.00013 1
RGD|2384 - symbol:Cox6a1 "cytochrome c oxidase, subunit V... 91 0.00017 1
UNIPROTKB|P12074 - symbol:COX6A1 "Cytochrome c oxidase su... 87 0.00045 1
UNIPROTKB|I3LTV6 - symbol:COX6A2 "Cytochrome c oxidase su... 87 0.00045 1
UNIPROTKB|Q5T8I0 - symbol:COX6A1P2 "Protein COX6A1P2" spe... 86 0.00057 1
UNIPROTKB|P13182 - symbol:COX6A1 "Cytochrome c oxidase su... 85 0.00072 1
>TAIR|locus:2137554 [details] [associations]
symbol:AT4G37830 species:3702 "Arabidopsis thaliana"
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
InterPro:IPR001349 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
GO:GO:0005739 EMBL:CP002687 EMBL:AL035709 EMBL:AL161592
GO:GO:0004129 GO:GO:0005751 HOGENOM:HOG000193965 KO:K02266
Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411 EMBL:AF326892
EMBL:AF339709 EMBL:AF380645 EMBL:AY056090 EMBL:AK228845
EMBL:AY088604 IPI:IPI00545037 PIR:T06030 RefSeq:NP_195496.1
UniGene:At.2877 ProteinModelPortal:Q9T070 SMR:Q9T070 STRING:Q9T070
PRIDE:Q9T070 DNASU:829939 EnsemblPlants:AT4G37830.1 GeneID:829939
KEGG:ath:AT4G37830 GeneFarm:3614 TAIR:At4g37830 eggNOG:NOG299757
InParanoid:Q9T070 OMA:EFPWGPD PhylomeDB:Q9T070 ProtClustDB:PLN02595
Genevestigator:Q9T070 Uniprot:Q9T070
Length = 102
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 58/87 (66%), Positives = 68/87 (78%)
Query: 2 AMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYN 61
A+VRS L + A+ R + +S PKR F+SSA HDDAYE AKWEKITYLGIA+CT LA Y
Sbjct: 4 AIVRSALSR-AVTRAAPKTSVAPKRNFSSSAGHDDAYEAAKWEKITYLGIASCTALAVYV 62
Query: 62 LSKGHPHYEEPPRYEYLHIRNKEFPWG 88
LSKGH H E+PP Y ++HIRNKEFPWG
Sbjct: 63 LSKGHHHGEDPPAYPHMHIRNKEFPWG 89
>FB|FBgn0050093 [details] [associations]
symbol:CG30093 species:7227 "Drosophila melanogaster"
[GO:0004129 "cytochrome-c oxidase activity" evidence=ISS]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] InterPro:IPR001349 Pfam:PF02046 PIRSF:PIRSF000277
ProDom:PD006036 EMBL:AE013599 GO:GO:0004129 GO:GO:0005751
eggNOG:NOG279259 KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 GeneTree:ENSGT00390000002756 OMA:CTLNSWL
EMBL:BT023629 RefSeq:NP_725504.1 UniGene:Dm.16027 SMR:Q4QPY7
STRING:Q4QPY7 EnsemblMetazoa:FBtr0087199 GeneID:246451
KEGG:dme:Dmel_CG30093 UCSC:CG30093-RA FlyBase:FBgn0050093
InParanoid:Q4QPY7 OrthoDB:EOG4W0VWQ GenomeRNAi:246451
NextBio:842527 Uniprot:Q4QPY7
Length = 94
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 43 WEKITYLGIATCTVLAFYNLSKGHPHYEEPP--RYEYLHIRNKEFPWG 88
W+++T+L VL N GH H E P +YEYL R K FPWG
Sbjct: 20 WKRVTFLLALPAIVLCAANAFTGHKHVEREPFAKYEYLRRRTKRFPWG 67
>FB|FBgn0034877 [details] [associations]
symbol:levy "levy" species:7227 "Drosophila melanogaster"
[GO:0004129 "cytochrome-c oxidase activity" evidence=ISS;IMP]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IC;ISS] [GO:0006123 "mitochondrial electron transport,
cytochrome c to oxygen" evidence=ISS;IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0030234 "enzyme regulator activity"
evidence=IMP] InterPro:IPR001349 Pfam:PF02046 PIRSF:PIRSF000277
ProDom:PD006036 EMBL:AE013599 GO:GO:0008340 GO:GO:0030234
GO:GO:0005811 GO:GO:0004129 GO:GO:0006123 GO:GO:0005751
eggNOG:NOG279259 KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 GeneTree:ENSGT00390000002756 OMA:NAYLKHQ
EMBL:AY070648 RefSeq:NP_611805.1 UniGene:Dm.30932 SMR:Q9W1N3
STRING:Q9W1N3 EnsemblMetazoa:FBtr0072061 GeneID:37728
KEGG:dme:Dmel_CG17280 UCSC:CG17280-RA CTD:37728 FlyBase:FBgn0034877
InParanoid:Q9W1N3 OrthoDB:EOG46T1HZ ChiTaRS:levy GenomeRNAi:37728
NextBio:805107 Uniprot:Q9W1N3
Length = 109
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSA-HHDDAYETAKWEKITYLGIATCTVLAFYNLSK 64
S +L A+RR AS+A G A+ A H Y+ W+++++ L N
Sbjct: 2 SAILNHAIRRQFGASAARNMSGTAAVAGEHSGGYKV--WKRLSFFVAVPAVGLCMLNAYL 59
Query: 65 GHPHYEEPPR-----YEYLHIRNKEFPWG 88
H + PR Y+YL R K FPWG
Sbjct: 60 KHQEEHDKPRQEFVKYDYLRRREKRFPWG 88
>ZFIN|ZDB-GENE-030131-7715 [details] [associations]
symbol:cox6a1 "cytochrome c oxidase subunit VIa
polypeptide 1" species:7955 "Danio rerio" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329
ZFIN:ZDB-GENE-030131-7715 GO:GO:0004129 GO:GO:0005751 KO:K02266
Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411 CTD:1337
HOVERGEN:HBG060482 EMBL:BC081530 IPI:IPI00773169
RefSeq:NP_001005592.1 UniGene:Dr.7906 ProteinModelPortal:Q642I9
SMR:Q642I9 STRING:Q642I9 PRIDE:Q642I9 GeneID:335774 KEGG:dre:335774
InParanoid:Q642I9 NextBio:20811022 ArrayExpress:Q642I9 Bgee:Q642I9
Uniprot:Q642I9
Length = 108
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 14 RRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHY 69
+++ +++ R +++AH ++A +T W+ +T++ G+A C +L Y L H H+
Sbjct: 9 QKLFKSAALTQSRQLSAAAHGENAAKT--WKILTFVVALPGVAVC-MLNMY-LRSQH-HH 63
Query: 70 EEPP--RYEYLHIRNKEFPWG 88
E+P Y +L IR+K FPWG
Sbjct: 64 EQPEFVPYSHLRIRSKRFPWG 84
>UNIPROTKB|E1C3B2 [details] [associations]
symbol:COX6A1 "Cytochrome c oxidase subunit 6A,
mitochondrial" species:9031 "Gallus gallus" [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 GO:GO:0004129
GO:GO:0005751 KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 GeneTree:ENSGT00390000002756 CTD:1337 OMA:NAYLKHQ
EMBL:AADN02043204 IPI:IPI00583550 RefSeq:XP_415270.1 PRIDE:E1C3B2
Ensembl:ENSGALT00000011661 GeneID:416978 KEGG:gga:416978
NextBio:20820364 Uniprot:E1C3B2
Length = 108
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 14 RRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHY 69
R + +A + P R A+SA H+ W+ ++++ + C +L Y L H H
Sbjct: 9 RLLPAAPGSVPARSMAASAAHEGG-GARLWKTLSFVVALPAVGVC-MLNCY-LKAQHEH- 64
Query: 70 EEPP--RYEYLHIRNKEFPWG 88
E P RY +L IR+K FPWG
Sbjct: 65 ERPEFIRYAHLRIRSKPFPWG 85
>MGI|MGI:103099 [details] [associations]
symbol:Cox6a1 "cytochrome c oxidase subunit VIa polypeptide
1" species:10090 "Mus musculus" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 MGI:MGI:103099 GO:GO:0005739 GO:GO:0004129
GO:GO:0005751 eggNOG:NOG279259 KO:K02266 Gene3D:4.10.95.10
PANTHER:PTHR11504 SUPFAM:SSF81411 CTD:1337 HOVERGEN:HBG060482
OMA:NAYLKHQ OrthoDB:EOG4N04GG ChiTaRS:COX6A1 EMBL:L06465
EMBL:U08440 IPI:IPI00121443 RefSeq:NP_031774.1 UniGene:Mm.43415
ProteinModelPortal:P43024 SMR:P43024 IntAct:P43024 STRING:P43024
PhosphoSite:P43024 SWISS-2DPAGE:P43024 PaxDb:P43024 PRIDE:P43024
GeneID:12861 KEGG:mmu:12861 InParanoid:P43024 NextBio:282424
Bgee:P43024 CleanEx:MM_COX6A1 Genevestigator:P43024
GermOnline:ENSMUSG00000041697 Uniprot:P43024
Length = 111
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 25 KRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP--RYEYL 78
+R +S AH ++ W+ +TY G+ + F L H +E PP Y +L
Sbjct: 23 RRPMSSGAHGEEG-SARMWKALTYFVALPGVGVSMLNVF--LKSRHEEHERPPFVAYPHL 79
Query: 79 HIRNKEFPWG 88
IR K FPWG
Sbjct: 80 RIRTKPFPWG 89
>WB|WBGene00006519 [details] [associations]
symbol:tag-174 species:6239 "Caenorhabditis elegans"
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 GO:GO:0005739
GO:GO:0008340 GO:GO:0040010 GO:GO:0000003 GO:GO:0004129
EMBL:FO080874 GO:GO:0005751 eggNOG:NOG279259 HOGENOM:HOG000193965
KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
GeneTree:ENSGT00390000002756 PIR:E88449 RefSeq:NP_498082.1
ProteinModelPortal:Q20779 SMR:Q20779 MINT:MINT-3386538
STRING:Q20779 PaxDb:Q20779 EnsemblMetazoa:F54D8.2.1
EnsemblMetazoa:F54D8.2.2 EnsemblMetazoa:F54D8.2.3
EnsemblMetazoa:F54D8.2.4 EnsemblMetazoa:F54D8.2.5
EnsemblMetazoa:F54D8.2.6 EnsemblMetazoa:F54D8.2.7 GeneID:175693
KEGG:cel:CELE_F54D8.2 UCSC:F54D8.2.1 CTD:175693 WormBase:F54D8.2
InParanoid:Q20779 OMA:CLALTMY NextBio:889244 Uniprot:Q20779
Length = 128
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 32 AHHDDAYETAKWEKITYLGIATCTVLAFYNLSKGHP-H--YEEPPRYEY--LHIRNKEFP 86
AH+ A ET W+KI ++ C L Y K H H +E P EY L++RNK FP
Sbjct: 44 AHN--ASET--WKKIFFIASIPCLALTMYAAFKDHKKHMSHERPEHVEYAFLNVRNKPFP 99
Query: 87 W 87
W
Sbjct: 100 W 100
>UNIPROTKB|J9P8X9 [details] [associations]
symbol:LOC477508 "Cytochrome c oxidase subunit 6A,
mitochondrial" species:9615 "Canis lupus familiaris" [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046 ProDom:PD006036
PROSITE:PS01329 GO:GO:0004129 GO:GO:0005751 Gene3D:4.10.95.10
PANTHER:PTHR11504 SUPFAM:SSF81411 GeneTree:ENSGT00390000002756
EMBL:AAEX03014735 Ensembl:ENSCAFT00000044210 Uniprot:J9P8X9
Length = 233
Score = 98 (39.6 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 25/75 (33%), Positives = 35/75 (46%)
Query: 20 SSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP-- 73
S AP R +S AH ++ W+ +TY G+ + F L H +E P
Sbjct: 140 SGAPLGRSMSSGAHGEEG-SARMWKALTYFVALPGVGVSMLNVF--LKSHHGEHERPEFI 196
Query: 74 RYEYLHIRNKEFPWG 88
Y +L IR+K FPWG
Sbjct: 197 AYPHLRIRSKPFPWG 211
>UNIPROTKB|F1RJI7 [details] [associations]
symbol:COX6A1 "Cytochrome c oxidase subunit 6A,
mitochondrial" species:9823 "Sus scrofa" [GO:0005751 "mitochondrial
respiratory chain complex IV" evidence=IEA] [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 GO:GO:0004129 GO:GO:0005751 KO:K02266
Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
GeneTree:ENSGT00390000002756 CTD:1337 OMA:NAYLKHQ EMBL:CU468509
RefSeq:NP_001177150.1 UniGene:Ssc.16681 Ensembl:ENSSSCT00000010859
GeneID:100152232 KEGG:ssc:100152232 Uniprot:F1RJI7
Length = 109
Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
Identities = 29/92 (31%), Positives = 41/92 (44%)
Query: 1 MAMVRSGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYLGIATCTVLAFY 60
MA + LRR S +R +SSAH ++ W+ +TY ++
Sbjct: 1 MAAAAGSRVSGLLRR----SQLQLRRPMSSSAHGEEG-SARMWKTLTYFVALPGVGVSML 55
Query: 61 NLS-KGHPHYEEPPR---YEYLHIRNKEFPWG 88
N+ K H EE P Y +L IR+K FPWG
Sbjct: 56 NVFLKSHHAEEERPEFVPYPHLRIRSKPFPWG 87
>UNIPROTKB|Q02221 [details] [associations]
symbol:COX6A2 "Cytochrome c oxidase subunit 6A2,
mitochondrial" species:9606 "Homo sapiens" [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
[GO:0006091 "generation of precursor metabolites and energy"
evidence=TAS] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 UniProt:Q02221
GO:GO:0006091 GO:GO:0004129 GO:GO:0005751 HOGENOM:HOG000193965
KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
TCDB:3.D.4.11.1 HOVERGEN:HBG060482 OrthoDB:EOG4N04GG CTD:1339
eggNOG:NOG280964 OMA:CTLNSWL EMBL:M83308 EMBL:U66875 EMBL:BC029818
IPI:IPI00293876 PIR:JC1304 RefSeq:NP_005196.1 UniGene:Hs.250760
ProteinModelPortal:Q02221 SMR:Q02221 IntAct:Q02221 STRING:Q02221
PhosphoSite:Q02221 DMDM:116241323 PRIDE:Q02221 DNASU:1339
Ensembl:ENST00000287490 GeneID:1339 KEGG:hsa:1339 UCSC:uc002ebx.2
GeneCards:GC16M031439 HGNC:HGNC:2279 HPA:HPA044591 MIM:602009
neXtProt:NX_Q02221 PharmGKB:PA26796 InParanoid:Q02221
PhylomeDB:Q02221 ChiTaRS:COX6A2 GenomeRNAi:1339 NextBio:5437
Bgee:Q02221 CleanEx:HS_COX6A2 Genevestigator:Q02221
GermOnline:ENSG00000156885
Length = 97
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 23 PPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFYNLSKGH-PHYEEPPRYE 76
P RG AS+A A+ W +T++ +A CT ++ L GH P E P Y+
Sbjct: 7 PLTRGLASAAKGGHGGAGARTWRLLTFVLALPSVALCTFNSY--LHSGHRPRPEFRP-YQ 63
Query: 77 YLHIRNKEFPWG 88
+L IR K +PWG
Sbjct: 64 HLRIRTKPYPWG 75
>RGD|2384 [details] [associations]
symbol:Cox6a1 "cytochrome c oxidase, subunit VIa, polypeptide 1"
species:10116 "Rattus norvegicus" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 RGD:2384
GO:GO:0004129 GO:GO:0005751 eggNOG:NOG279259 HOGENOM:HOG000193965
KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
GeneTree:ENSGT00390000002756 CTD:1337 HOVERGEN:HBG060482 OMA:NAYLKHQ
OrthoDB:EOG4N04GG EMBL:X72757 EMBL:X12553 IPI:IPI00194042 PIR:S01156
PIR:S65379 RefSeq:NP_036946.1 UniGene:Rn.880
ProteinModelPortal:P10818 SMR:P10818 STRING:P10818 PRIDE:P10818
Ensembl:ENSRNOT00000001545 GeneID:25282 KEGG:rno:25282 UCSC:RGD:2384
InParanoid:P10818 NextBio:606005 Genevestigator:P10818
GermOnline:ENSRNOG00000001170 Uniprot:P10818
Length = 111
Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
Identities = 31/90 (34%), Positives = 42/90 (46%)
Query: 6 SGLLQTALRRVSSASSAPPKRGFASSAHHDDAYETAK-WEKITYL----GIATCTVLAFY 60
SGLL AL RV R +S AH ++ +A+ W+ +TY G+ + F
Sbjct: 12 SGLLGRALPRVG--------RPMSSGAHGEEG--SARIWKALTYFVALPGVGVSMLNVF- 60
Query: 61 NLSKGHPHYEEPP--RYEYLHIRNKEFPWG 88
L H +E P Y +L IR K FPWG
Sbjct: 61 -LKSRHEEHERPEFVAYPHLRIRTKPFPWG 89
>UNIPROTKB|P12074 [details] [associations]
symbol:COX6A1 "Cytochrome c oxidase subunit 6A1,
mitochondrial" species:9606 "Homo sapiens" [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
[GO:0006091 "generation of precursor metabolites and energy"
evidence=TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=TAS] [GO:0022904 "respiratory electron transport chain"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 GO:GO:0005743 GO:GO:0044281 GO:GO:0004129
GO:GO:0022904 GO:GO:0005751 eggNOG:NOG279259 HOGENOM:HOG000193965
KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
CTD:1337 HOVERGEN:HBG060482 OMA:NAYLKHQ OrthoDB:EOG4N04GG
EMBL:AK312009 EMBL:AL021546 EMBL:BC007723 EMBL:BC070186
EMBL:BC107861 EMBL:X15341 IPI:IPI00021793 RefSeq:NP_004364.2
UniGene:Hs.369624 ProteinModelPortal:P12074 SMR:P12074
IntAct:P12074 STRING:P12074 PhosphoSite:P12074 DMDM:6166030
SWISS-2DPAGE:P12074 PaxDb:P12074 PRIDE:P12074 DNASU:1337
Ensembl:ENST00000229379 GeneID:1337 KEGG:hsa:1337 UCSC:uc001tyf.1
GeneCards:GC12P120875 HGNC:HGNC:2277 MIM:602072 neXtProt:NX_P12074
PharmGKB:PA26794 InParanoid:P12074 PhylomeDB:P12074 ChiTaRS:COX6A1
GenomeRNAi:1337 NextBio:5431 ArrayExpress:P12074 Bgee:P12074
CleanEx:HS_COX6A1 Genevestigator:P12074 GermOnline:ENSG00000111775
Uniprot:P12074
Length = 109
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 11 TALRRVSSASSAPPKRGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGH 66
+++ R+ S R +S AH ++ W+ +T+ G+A ++L Y L H
Sbjct: 7 SSVSRLLGRSRPQLGRPMSSGAHGEEG-SARMWKTLTFFVALPGVAV-SMLNVY-LKSHH 63
Query: 67 PHYEEPP--RYEYLHIRNKEFPWG 88
+E P Y +L IR K FPWG
Sbjct: 64 GEHERPEFIAYPHLRIRTKPFPWG 87
>UNIPROTKB|I3LTV6 [details] [associations]
symbol:COX6A2 "Cytochrome c oxidase subunit 6A,
mitochondrial" species:9823 "Sus scrofa" [GO:0005751 "mitochondrial
respiratory chain complex IV" evidence=IEA] [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 GO:GO:0004129 GO:GO:0005751 KO:K02266
Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
GeneTree:ENSGT00390000002756 OMA:CTLNSWL EMBL:CU915579
RefSeq:XP_003124503.1 RefSeq:XP_003481061.1
Ensembl:ENSSSCT00000027708 GeneID:100519594 KEGG:ssc:100519594
Uniprot:I3LTV6
Length = 97
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 26 RGFASSAHHDDAYETAK-WEKITYLGIATCTV-LAFYN--LSKGHPHYEEPPRYEYLHIR 81
RG AS+A D A+ W +T+ G+A +V L N L GH H E Y +L IR
Sbjct: 10 RGLASAAKGDHGGTGARTWRFLTF-GLALPSVALCTLNSWLHSGHHHRPEFIPYHHLRIR 68
Query: 82 NKEFPWG 88
K + WG
Sbjct: 69 TKPYSWG 75
>UNIPROTKB|Q5T8I0 [details] [associations]
symbol:COX6A1P2 "Protein COX6A1P2" species:9606 "Homo
sapiens" [GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 GO:GO:0004129
GO:GO:0005751 HOGENOM:HOG000193965 Gene3D:4.10.95.10
PANTHER:PTHR11504 SUPFAM:SSF81411 HOVERGEN:HBG060482 EMBL:AL160264
IPI:IPI00176681 SMR:Q5T8I0 STRING:Q5T8I0 Ensembl:ENST00000423336
HGNC:HGNC:35239 OMA:CMANAYM Uniprot:Q5T8I0
Length = 109
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 26 RGFASSAHHDDAYETAKWEKITYL----GIATCTVLAFYNLSKGHPHYEEPP--RYEYLH 79
R +S AH ++ W+ +T+ G+A ++L Y L H +E P Y +L
Sbjct: 22 RPMSSGAHGEEG-SARMWKTLTFFVALPGVAV-SMLNVY-LKSHHGEHERPEFIAYPHLR 78
Query: 80 IRNKEFPWG 88
IR K FPWG
Sbjct: 79 IRTKPFPWG 87
>UNIPROTKB|P13182 [details] [associations]
symbol:COX6A1 "Cytochrome c oxidase subunit 6A1,
mitochondrial" species:9913 "Bos taurus" [GO:0005751 "mitochondrial
respiratory chain complex IV" evidence=IEA] [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 GO:GO:0004129 GO:GO:0005751 eggNOG:NOG279259
HOGENOM:HOG000193965 KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 GeneTree:ENSGT00390000002756 EMBL:BC114182
EMBL:M38520 IPI:IPI00715456 PIR:S18314 RefSeq:NP_001071299.1
RefSeq:XP_003585081.1 UniGene:Bt.7193 ProteinModelPortal:P13182
SMR:P13182 STRING:P13182 PRIDE:P13182 Ensembl:ENSBTAT00000016993
GeneID:100851363 GeneID:282199 KEGG:bta:100851363 KEGG:bta:282199
CTD:1337 HOVERGEN:HBG060482 InParanoid:P13182 OMA:NAYLKHQ
OrthoDB:EOG4N04GG NextBio:20806024 Uniprot:P13182
Length = 109
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 26 RGFASSAHHDDAYETAKWEKITYLGIATCTVLAFYNLS-KGHPHYEEPPR---YEYLHIR 81
R +S AH ++ W+ +TY ++ N+ K H EE P Y +L IR
Sbjct: 22 RCMSSGAHGEEG-SARMWKALTYFVALPGVGVSMLNVFLKSHHGEEERPEFVAYPHLRIR 80
Query: 82 NKEFPWG 88
+K FPWG
Sbjct: 81 SKPFPWG 87
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.444 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 102 102 0.00091 102 3 11 22 0.38 30
29 0.48 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 563 (60 KB)
Total size of DFA: 133 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.90u 0.21s 11.11t Elapsed: 00:00:01
Total cpu time: 10.90u 0.21s 11.11t Elapsed: 00:00:01
Start: Fri May 10 17:06:50 2013 End: Fri May 10 17:06:51 2013