BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034193
MADLPGYMRACLHTGKLAFLAILVSGGIVLQILACALYNNWWPMLTGKPHELFVFGVNGV
LFLESILHFVANFKYIVCPAIGQLSFMHAKIISDLPSMPRP

High Scoring Gene Products

Symbol, full name Information P value
AT1G32410 protein from Arabidopsis thaliana 6.7e-17
AT3G11530 protein from Arabidopsis thaliana 2.4e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034193
        (101 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2033729 - symbol:AT1G32410 "AT1G32410" species...   208  6.7e-17   1
TAIR|locus:2080732 - symbol:AT3G11530 "AT3G11530" species...    99  2.4e-05   1


>TAIR|locus:2033729 [details] [associations]
            symbol:AT1G32410 "AT1G32410" species:3702 "Arabidopsis
            thaliana" [GO:0005215 "transporter activity" evidence=ISS]
            [GO:0006810 "transport" evidence=ISS] [GO:0005773 "vacuole"
            evidence=IDA] Pfam:PF04133 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005773 GO:GO:0015031 EMBL:AC007767
            GO:GO:0010008 eggNOG:NOG116508 HOGENOM:HOG000038515
            InterPro:IPR007262 PANTHER:PTHR12050 PIR:B86449 EMBL:AF361848
            EMBL:AY066053 EMBL:AK176917 EMBL:AK230417 EMBL:AY086458
            IPI:IPI00537465 RefSeq:NP_001077643.1 RefSeq:NP_001077644.1
            RefSeq:NP_001077645.1 RefSeq:NP_564400.1 RefSeq:NP_849741.1
            UniGene:At.15526 IntAct:Q9AST6 PaxDb:Q9AST6 PRIDE:Q9AST6
            EnsemblPlants:AT1G32410.1 EnsemblPlants:AT1G32410.2
            EnsemblPlants:AT1G32410.3 EnsemblPlants:AT1G32410.4
            EnsemblPlants:AT1G32410.5 GeneID:840134 KEGG:ath:AT1G32410
            TAIR:At1g32410 InParanoid:Q9AST6 OMA:IMYVLLP PhylomeDB:Q9AST6
            ProtClustDB:CLSN2688199 Genevestigator:Q9AST6 Uniprot:Q9AST6
        Length = 140

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 48/93 (51%), Positives = 61/93 (65%)

Query:     1 MADLPGYMRACLHTGKLAFLAILVSGGIVLQILACALYNNWWPMLTG-----KPHELFVF 55
             MAD+PGY+R CL  GK+AFLAILVS GIVLQILACAL+NNWWPML+       P  L  F
Sbjct:     1 MADVPGYLRTCLDMGKIAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFF 60

Query:    56 GVNGV--LFLESILHFVANFKYIV-CPAIGQLS 85
             G +    LF ES   ++   K++    A+G ++
Sbjct:    61 GGSDSTSLFNESDNSWINAAKFLTGASAVGSVA 93


>TAIR|locus:2080732 [details] [associations]
            symbol:AT3G11530 "AT3G11530" species:3702 "Arabidopsis
            thaliana" [GO:0005215 "transporter activity" evidence=ISS]
            [GO:0006810 "transport" evidence=ISS] [GO:0005773 "vacuole"
            evidence=IDA] [GO:0006661 "phosphatidylinositol biosynthetic
            process" evidence=RCA] Pfam:PF04133 GO:GO:0005773 EMBL:CP002686
            InterPro:IPR007262 PANTHER:PTHR12050 IPI:IPI00524848
            RefSeq:NP_566391.1 RefSeq:NP_974285.2 UniGene:At.22373 PRIDE:F4J6B8
            EnsemblPlants:AT3G11530.1 EnsemblPlants:AT3G11530.2 GeneID:820326
            KEGG:ath:AT3G11530 OMA:EFTSFFI Uniprot:F4J6B8
        Length = 113

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 22/48 (45%), Positives = 26/48 (54%)

Query:    23 LVSGGIVLQILACALYNNWWPMLTGK-----PHELFVFGVNGVLFLES 65
             + S  I+LQILACA+Y NWWPML+       P     FG     FL S
Sbjct:     1 MFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLIS 48


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.145   0.478    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      101       101   0.00091  102 3  11 21  0.45    29
                                                     29  0.47    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  573 (61 KB)
  Total size of DFA:  120 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.71u 0.13s 10.84t   Elapsed:  00:00:01
  Total cpu time:  10.71u 0.13s 10.84t   Elapsed:  00:00:01
  Start:  Fri May 10 17:26:05 2013   End:  Fri May 10 17:26:06 2013

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