Your job contains 1 sequence.
>034201
MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQGMSTFANEGLIPFTSVETNVKQE
IAPNHNIRAGLASLIPKKHESWSIIYGWRASLASLLFKQGN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 034201
(101 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2149299 - symbol:AT5G20180 species:3702 "Arabi... 302 7.3e-27 1
ASPGD|ASPL0000017226 - symbol:AN10477 species:162425 "Eme... 147 2.0e-10 1
UNIPROTKB|P0A7Q6 - symbol:rpmJ "50S ribosomal subunit pro... 140 1.1e-09 1
CGD|CAL0001889 - symbol:orf19.760 species:5476 "Candida a... 137 2.2e-09 1
SGD|S000007224 - symbol:RTC6 "Protein involved in transla... 137 2.2e-09 1
UNIPROTKB|P0C458 - symbol:rpl36 "50S ribosomal protein L3... 135 3.6e-09 1
UNIPROTKB|P0C459 - symbol:rpl36 "50S ribosomal protein L3... 135 3.6e-09 1
UNIPROTKB|P62727 - symbol:rpl36 "50S ribosomal protein L3... 135 3.6e-09 1
UNIPROTKB|Q6ENE0 - symbol:rpl36 "50S ribosomal protein L3... 135 3.6e-09 1
TIGR_CMR|BA_0134 - symbol:BA_0134 "ribosomal protein L36"... 133 5.9e-09 1
TIGR_CMR|CHY_2285 - symbol:CHY_2285 "ribosomal protein L3... 133 5.9e-09 1
TIGR_CMR|CJE_1763 - symbol:CJE_1763 "ribosomal protein L3... 132 7.6e-09 1
UNIPROTKB|P0A497 - symbol:rpmJ "50S ribosomal protein L36... 129 1.6e-08 1
TIGR_CMR|VC_2575 - symbol:VC_2575 "ribosomal protein L36"... 129 1.6e-08 1
TIGR_CMR|DET_0498 - symbol:DET_0498 "ribosomal protein L3... 128 2.0e-08 1
TIGR_CMR|SO_0252 - symbol:SO_0252 "ribosomal protein L36"... 124 5.3e-08 1
TIGR_CMR|CPS_0622 - symbol:CPS_0622 "ribosomal protein L3... 123 6.8e-08 1
TIGR_CMR|CBU_2097 - symbol:CBU_2097 "ribosomal protein L3... 121 1.1e-07 1
ZFIN|ZDB-GENE-060503-821 - symbol:mrpl36 "mitochondrial r... 120 1.4e-07 1
UNIPROTKB|F1NQQ6 - symbol:F1NQQ6 "Ribosomal protein" spec... 116 3.8e-07 1
POMBASE|SPBC83.06c - symbol:SPBC83.06c "mitochondrial rib... 116 3.8e-07 1
DICTYBASE|DDB_G0280799 - symbol:DDB_G0280799 species:4468... 114 6.1e-07 1
RGD|1306375 - symbol:Mrpl36 "mitochondrial ribosomal prot... 111 1.3e-06 1
UNIPROTKB|G3MYN6 - symbol:MRPL36 "Ribosomal protein" spec... 107 3.4e-06 1
MGI|MGI:2137228 - symbol:Mrpl36 "mitochondrial ribosomal ... 107 3.4e-06 1
UNIPROTKB|I3LDE8 - symbol:MRPL36 "Ribosomal protein" spec... 106 4.3e-06 1
UNIPROTKB|E2RNM7 - symbol:MRPL36 "Ribosomal protein" spec... 103 9.0e-06 1
UNIPROTKB|Q9P0J6 - symbol:MRPL36 "39S ribosomal protein L... 102 1.1e-05 1
UNIPROTKB|Q9KTM3 - symbol:rpmJ2 "50S ribosomal protein L3... 85 0.00072 1
TIGR_CMR|SPO_3284 - symbol:SPO_3284 "ribosomal protein L3... 85 0.00072 1
TIGR_CMR|VC_0879 - symbol:VC_0879 "ribosomal protein L36,... 85 0.00072 1
>TAIR|locus:2149299 [details] [associations]
symbol:AT5G20180 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0006354
"DNA-dependent transcription, elongation" evidence=RCA]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
KO:K02919 eggNOG:COG0257 HOGENOM:HOG000111584 EMBL:AY062820
EMBL:AY081660 EMBL:AY086821 EMBL:AK317333 IPI:IPI00524551
RefSeq:NP_197518.1 RefSeq:NP_850857.1 UniGene:At.27221
ProteinModelPortal:Q8W464 SMR:Q8W464 STRING:Q8W464 PaxDb:Q8W464
PRIDE:Q8W464 EnsemblPlants:AT5G20180.1 EnsemblPlants:AT5G20180.2
GeneID:832141 KEGG:ath:AT5G20180 TAIR:At5g20180 InParanoid:Q8W464
OMA:YVICSSN PhylomeDB:Q8W464 ProtClustDB:CLSN2687194
EvolutionaryTrace:Q8W464 Genevestigator:Q8W464 Uniprot:Q8W464
Length = 103
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 63/104 (60%), Positives = 75/104 (72%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQGMSTFANEGLIPFTS-VETNVKQ 59
MKVRSSVKKMCEFCK +KRRGRVYVICS+N KHKQRQG S+FA EG+ P E Q
Sbjct: 1 MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60
Query: 60 EIA--PNHNIRAGLASLIPKKHESWSIIYGWRASLASLLFKQGN 101
E+ P + AGLASL+ K+ + +GWR+ LAS+LFKQGN
Sbjct: 61 ELVRLPGQGVSAGLASLLHKRPMP-TAYFGWRSGLASILFKQGN 103
>ASPGD|ASPL0000017226 [details] [associations]
symbol:AN10477 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828
HAMAP:MF_00251 GO:GO:0006412 GO:GO:0005840 EMBL:BN001302
GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
EnsemblFungi:CADANIAT00004878 HOGENOM:HOG000089092 Uniprot:C8V6Q7
Length = 109
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 26/38 (68%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MK RSSVK++CE CK ++R+ RVY+ICS N KHKQRQG
Sbjct: 71 MKTRSSVKRLCEGCKPVRRKNRVYIICSKNPKHKQRQG 108
>UNIPROTKB|P0A7Q6 [details] [associations]
symbol:rpmJ "50S ribosomal subunit protein L36"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR000473
Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251 EMBL:X01563 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 EMBL:U18997 GO:GO:0005840 GO:GO:0003735 PDB:2VHM
PDBsum:2VHM PDB:2RDO PDBsum:2RDO PANTHER:PTHR18804 SUPFAM:SSF57840
TIGRFAMs:TIGR01022 KO:K02919 PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11
PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T PDBsum:3J0W
PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF
PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4
PDB:2AWB PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA
PDB:2QBC PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX
PDB:2QOZ PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2
PDB:3DF4 PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R
PDB:3I1T PDB:3I20 PDB:3I22 PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS
PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0
PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2I2T PDBsum:2I2V PDBsum:2J28 PDBsum:2QAM
PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE PDBsum:2QBG
PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX PDBsum:2QOZ
PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L PDBsum:2Z4N
PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D PDBsum:3FIK
PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T PDBsum:3I20
PDBsum:3I22 PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS
PDBsum:3OAT PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR
PDBsum:3OFZ PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T
PDBsum:4GAR PDBsum:4GAU PDB:3BBX PDBsum:3BBX eggNOG:COG0257
HOGENOM:HOG000111584 ProtClustDB:PRK00465 EMBL:M12432 PIR:S14057
RefSeq:NP_417758.1 RefSeq:YP_492133.1 ProteinModelPortal:P0A7Q6
SMR:P0A7Q6 IntAct:P0A7Q6 EnsemblBacteria:EBESCT00000002931
EnsemblBacteria:EBESCT00000016384 GeneID:12934393 GeneID:947805
KEGG:ecj:Y75_p3877 KEGG:eco:b3299 PATRIC:32122030 EchoBASE:EB1214
EcoGene:EG11232 BioCyc:EcoCyc:EG11232-MONOMER
BioCyc:ECOL316407:JW3261-MONOMER EvolutionaryTrace:P0A7Q6
Genevestigator:P0A7Q6 Uniprot:P0A7Q6
Length = 38
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVKK+C CKI+KR G + VICSA KHKQRQG
Sbjct: 1 MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG 38
>CGD|CAL0001889 [details] [associations]
symbol:orf19.760 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828
CGD:CAL0001889 HAMAP:MF_00251 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AACQ01000123 EMBL:AACQ01000122 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 eggNOG:COG0257
RefSeq:XP_713570.1 RefSeq:XP_713605.1 ProteinModelPortal:Q59VH3
SMR:Q59VH3 STRING:Q59VH3 GeneID:3644739 GeneID:3644787
KEGG:cal:CaO19.760 KEGG:cal:CaO19.8380 Uniprot:Q59VH3
Length = 123
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
KVR+SVK MC+ C ++KR+GRVYV C +N KHKQRQG
Sbjct: 87 KVRTSVKCMCKDCYLVKRKGRVYVYCKSNGKHKQRQG 123
>SGD|S000007224 [details] [associations]
symbol:RTC6 "Protein involved in translation" species:4932
"Saccharomyces cerevisiae" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IGI;IMP] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=ISA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000473 Pfam:PF00444
PROSITE:PS00828 SGD:S000007224 GO:GO:0042254 EMBL:BK006949
GO:GO:0005762 GO:GO:0003735 GO:GO:0032543 EMBL:Z73540
PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022 eggNOG:COG0257
GeneTree:ENSGT00390000010866 OrthoDB:EOG4M3DKD EMBL:Z73539
EMBL:AY558522 PIR:S72254 RefSeq:NP_015141.1
ProteinModelPortal:O14464 SMR:O14464 DIP:DIP-6800N IntAct:O14464
MINT:MINT-615849 STRING:O14464 PaxDb:O14464 EnsemblFungi:YPL183W-A
GeneID:855918 KEGG:sce:YPL183W-A CYGD:YPL183w-a NextBio:980637
Genevestigator:O14464 GermOnline:YPL183W-A Uniprot:O14464
Length = 93
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 23/37 (62%), Positives = 30/37 (81%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
KVR+SVKK C C +++R+GRVY+ C +N KHKQRQG
Sbjct: 57 KVRTSVKKFCSDCYLVRRKGRVYIYCKSNKKHKQRQG 93
>UNIPROTKB|P0C458 [details] [associations]
symbol:rpl36 "50S ribosomal protein L36, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
GO:GO:0009507 GO:GO:0009536 GO:GO:0006412 GO:GO:0005840
EMBL:AY522331 GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840
TIGRFAMs:TIGR01022 ProteinModelPortal:P0C458 SMR:P0C458
Gramene:P0C458 Genevestigator:P0C458 Uniprot:P0C458
Length = 37
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MK+R+SV+K+C C++I+RRGR+ VICS N KHKQRQG
Sbjct: 1 MKIRASVRKICTKCRLIRRRGRIRVICS-NPKHKQRQG 37
>UNIPROTKB|P0C459 [details] [associations]
symbol:rpl36 "50S ribosomal protein L36, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828
HAMAP:MF_00251 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
GO:GO:0005840 EMBL:AY522329 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 ProteinModelPortal:P0C459
SMR:P0C459 Gramene:P0C459 Uniprot:P0C459
Length = 37
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MK+R+SV+K+C C++I+RRGR+ VICS N KHKQRQG
Sbjct: 1 MKIRASVRKICTKCRLIRRRGRIRVICS-NPKHKQRQG 37
>UNIPROTKB|P62727 [details] [associations]
symbol:rpl36 "50S ribosomal protein L36, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828
HAMAP:MF_00251 GO:GO:0009507 GO:GO:0009536 GO:GO:0006412
GO:GO:0005840 EMBL:X15901 EMBL:AY522330 GO:GO:0003735
ProtClustDB:CHL00029 PANTHER:PTHR18804 SUPFAM:SSF57840
TIGRFAMs:TIGR01022 PIR:JQ0260 RefSeq:NP_039419.1
ProteinModelPortal:P62727 SMR:P62727 STRING:P62727
EnsemblPlants:LOC_Os01g57952.1 EnsemblPlants:LOC_Os04g16836.1
EnsemblPlants:LOC_Os05g22714.1 EnsemblPlants:LOC_Osp1g00680.1
GeneID:3131430 KEGG:osa:3131430 Gramene:P62727 eggNOG:NOG273055
KO:K02919 Uniprot:P62727
Length = 37
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MK+R+SV+K+C C++I+RRGR+ VICS N KHKQRQG
Sbjct: 1 MKIRASVRKICTKCRLIRRRGRIRVICS-NPKHKQRQG 37
>UNIPROTKB|Q6ENE0 [details] [associations]
symbol:rpl36 "50S ribosomal protein L36, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
GO:GO:0009507 GO:GO:0009536 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AP006728 RefSeq:YP_052783.1
ProteinModelPortal:Q6ENE0 SMR:Q6ENE0 GeneID:2885945 Gramene:Q6ENE0
ProtClustDB:CHL00029 PANTHER:PTHR18804 SUPFAM:SSF57840
TIGRFAMs:TIGR01022 Uniprot:Q6ENE0
Length = 37
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 25/38 (65%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MK+R+SV+K+C C++I+RRGR+ VICS N KHKQRQG
Sbjct: 1 MKIRASVRKICTKCRLIRRRGRIRVICS-NPKHKQRQG 37
>TIGR_CMR|BA_0134 [details] [associations]
symbol:BA_0134 "ribosomal protein L36" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840
TIGRFAMs:TIGR01022 KO:K02919 eggNOG:COG0257 RefSeq:NP_842702.1
RefSeq:YP_016739.1 RefSeq:YP_026420.1 ProteinModelPortal:Q81VQ6
SMR:Q81VQ6 DNASU:1087046 EnsemblBacteria:EBBACT00000013170
EnsemblBacteria:EBBACT00000018222 EnsemblBacteria:EBBACT00000023906
GeneID:1087046 GeneID:2819281 GeneID:2850775 KEGG:ban:BA_0134
KEGG:bar:GBAA_0134 KEGG:bat:BAS0134 HOGENOM:HOG000111584
ProtClustDB:PRK00465 BioCyc:BANT260799:GJAJ-145-MONOMER
BioCyc:BANT261594:GJ7F-147-MONOMER Uniprot:Q81VQ6
Length = 37
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 26/38 (68%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE CK+I+RRG+V VIC N KHKQ+QG
Sbjct: 1 MKVRPSVKPICEKCKVIRRRGKVMVICE-NPKHKQKQG 37
>TIGR_CMR|CHY_2285 [details] [associations]
symbol:CHY_2285 "ribosomal protein L36" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828
HAMAP:MF_00251 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 KO:K02919 HOGENOM:HOG000111584
RefSeq:YP_361094.1 ProteinModelPortal:Q3A9U0 SMR:Q3A9U0
STRING:Q3A9U0 GeneID:3728786 KEGG:chy:CHY_2285 PATRIC:21277641
eggNOG:NOG130225 BioCyc:CHYD246194:GJCN-2284-MONOMER Uniprot:Q3A9U0
Length = 37
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE CKII+R+GRV VIC N KHKQ+QG
Sbjct: 1 MKVRPSVKPICEKCKIIRRKGRVRVICE-NPKHKQKQG 37
>TIGR_CMR|CJE_1763 [details] [associations]
symbol:CJE_1763 "ribosomal protein L36" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828
HAMAP:MF_00251 GO:GO:0006412 GO:GO:0005840 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 KO:K02919 HOGENOM:HOG000111584
ProtClustDB:PRK00465 RefSeq:YP_179735.1 HSSP:P80256
ProteinModelPortal:Q5HSK0 SMR:Q5HSK0 STRING:Q5HSK0 GeneID:3232390
KEGG:cjr:CJE1763 PATRIC:20045336 eggNOG:bactNOG44345
BioCyc:CJEJ195099:GJC0-1793-MONOMER Uniprot:Q5HSK0
Length = 37
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVKKMC+ CK+++R+G V +IC N KHKQRQG
Sbjct: 1 MKVRPSVKKMCDKCKVVRRKGVVRIICE-NPKHKQRQG 37
>UNIPROTKB|P0A497 [details] [associations]
symbol:rpmJ "50S ribosomal protein L36" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000473 Pfam:PF00444
PROSITE:PS00828 HAMAP:MF_00251 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022 KO:K02919
eggNOG:COG0257 ProtClustDB:PRK00465 EMBL:Y08367 EMBL:Y07817
PIR:A82057 RefSeq:NP_232203.1 ProteinModelPortal:P0A497 SMR:P0A497
DNASU:2615592 GeneID:2615592 KEGG:vch:VC2575 PATRIC:20084176
Uniprot:P0A497
Length = 37
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVKK+C CK+IKR G V VICS KHKQRQG
Sbjct: 1 MKVRASVKKICRNCKVIKRNGVVRVICSEP-KHKQRQG 37
>TIGR_CMR|VC_2575 [details] [associations]
symbol:VC_2575 "ribosomal protein L36" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
KO:K02919 eggNOG:COG0257 ProtClustDB:PRK00465 EMBL:Y08367
EMBL:Y07817 PIR:A82057 RefSeq:NP_232203.1 ProteinModelPortal:P0A497
SMR:P0A497 DNASU:2615592 GeneID:2615592 KEGG:vch:VC2575
PATRIC:20084176 Uniprot:P0A497
Length = 37
Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVKK+C CK+IKR G V VICS KHKQRQG
Sbjct: 1 MKVRASVKKICRNCKVIKRNGVVRVICSEP-KHKQRQG 37
>TIGR_CMR|DET_0498 [details] [associations]
symbol:DET_0498 "ribosomal protein L36" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828
HAMAP:MF_00251 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CP000027 GenomeReviews:CP000027_GR PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 KO:K02919 eggNOG:COG0257
HOGENOM:HOG000111584 ProtClustDB:PRK00465 RefSeq:YP_181242.1
ProteinModelPortal:Q3Z957 SMR:Q3Z957 STRING:Q3Z957 GeneID:3230224
KEGG:det:DET0498 PATRIC:21608065 BioCyc:DETH243164:GJNF-498-MONOMER
Uniprot:Q3Z957
Length = 37
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 27/38 (71%), Positives = 30/38 (78%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVK MCE CKI+KR G V IC+ N KHKQRQG
Sbjct: 1 MKVRASVKTMCEKCKIVKRNGVVRNICT-NPKHKQRQG 37
>TIGR_CMR|SO_0252 [details] [associations]
symbol:SO_0252 "ribosomal protein L36" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
GO:GO:0006412 GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
KO:K02919 eggNOG:COG0257 HOGENOM:HOG000111584 ProtClustDB:PRK00465
RefSeq:NP_715892.1 ProteinModelPortal:Q8EK49 SMR:Q8EK49
GeneID:1168135 KEGG:son:SO_0252 PATRIC:23520197 Uniprot:Q8EK49
Length = 37
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 26/38 (68%), Positives = 29/38 (76%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVKK+C CKI+KR G V VIC KHKQRQG
Sbjct: 1 MKVRASVKKICRNCKIVKRSGVVRVIC-VEPKHKQRQG 37
>TIGR_CMR|CPS_0622 [details] [associations]
symbol:CPS_0622 "ribosomal protein L36" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
GO:GO:0006412 GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
KO:K02919 eggNOG:COG0257 HOGENOM:HOG000111584 RefSeq:YP_267372.1
ProteinModelPortal:Q488Z2 SMR:Q488Z2 STRING:Q488Z2 GeneID:3521373
KEGG:cps:CPS_0622 PATRIC:21464571 ProtClustDB:CLSK2768399
BioCyc:CPSY167879:GI48-709-MONOMER Uniprot:Q488Z2
Length = 37
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVKK+C CK++KR+G + V+C KHKQRQG
Sbjct: 1 MKVRASVKKICRNCKVVKRKGVIRVLC-VEPKHKQRQG 37
>TIGR_CMR|CBU_2097 [details] [associations]
symbol:CBU_2097 "ribosomal protein L36" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
GO:GO:0006412 GO:GO:0005840 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0003735 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
KO:K02919 eggNOG:COG0257 HOGENOM:HOG000111584 ProtClustDB:PRK00465
RefSeq:YP_338278.1 ProteinModelPortal:Q4AAY2 SMR:Q4AAY2
GeneID:3704276 KEGG:cbu:CBU_2097 PATRIC:17929211
BioCyc:CBUR227377:GJ7S-265-MONOMER Uniprot:Q4AAY2
Length = 40
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 24/37 (64%), Positives = 30/37 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQ 37
MKVR+SVK+MC CK+I+R G V VICS + +HKQRQ
Sbjct: 1 MKVRASVKRMCRNCKVIRRNGVVRVICS-DARHKQRQ 36
>ZFIN|ZDB-GENE-060503-821 [details] [associations]
symbol:mrpl36 "mitochondrial ribosomal protein L36"
species:7955 "Danio rerio" [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000473
Pfam:PF00444 PROSITE:PS00828 ZFIN:ZDB-GENE-060503-821 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BX571830
PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
eggNOG:NOG129164 EMBL:BC142854 IPI:IPI00759011
RefSeq:NP_001092727.1 UniGene:Dr.74684 ProteinModelPortal:Q1LWG3
STRING:Q1LWG3 Ensembl:ENSDART00000103862 GeneID:100093703
KEGG:dre:100093703 CTD:64979 GeneTree:ENSGT00390000010866
HOGENOM:HOG000111586 InParanoid:Q1LWG3 OrthoDB:EOG4FN4KF
NextBio:20788633 Bgee:Q1LWG3 Uniprot:Q1LWG3
Length = 116
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MK +S++KK C C ++RRGR++V C A+ +HKQRQG
Sbjct: 79 MKTKSALKKRCNECFFVRRRGRLFVFCKAHPRHKQRQG 116
>UNIPROTKB|F1NQQ6 [details] [associations]
symbol:F1NQQ6 "Ribosomal protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 HAMAP:MF_00251 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 GeneTree:ENSGT00390000010866
EMBL:AADN02008187 EMBL:AADN02008186 IPI:IPI00590949
Ensembl:ENSGALT00000036982 Uniprot:F1NQQ6
Length = 141
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQ 37
+K ++S+K+ C+ C I++RRGR+YV C N +HKQR+
Sbjct: 104 LKTKTSIKRRCKDCYIVRRRGRLYVCCKTNPRHKQRK 140
>POMBASE|SPBC83.06c [details] [associations]
symbol:SPBC83.06c "mitochondrial ribosomal protein
subunit L36, Rtc6 (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR000473 Pfam:PF00444 PomBase:SPBC83.06c
EMBL:CU329671 GO:GO:0005762 GO:GO:0003735 GO:GO:0032543
PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022 eggNOG:COG0257
HSSP:P80256 HOGENOM:HOG000111586 PIR:T40695 RefSeq:NP_595638.2
STRING:O94690 GeneID:2540781 OrthoDB:EOG4M3DKD NextBio:20801899
Uniprot:O94690
Length = 92
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
KV++SVKK C C ++R+GR+YV+C + +HK RQG
Sbjct: 56 KVKASVKKRCSSCYFVRRKGRLYVLCKKHPRHKTRQG 92
>DICTYBASE|DDB_G0280799 [details] [associations]
symbol:DDB_G0280799 species:44689 "Dictyostelium
discoideum" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828
dictyBase:DDB_G0280799 HAMAP:MF_00251 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AAFI02000038 PANTHER:PTHR18804 SUPFAM:SSF57840
TIGRFAMs:TIGR01022 RefSeq:XP_641036.1 ProteinModelPortal:Q54UV1
EnsemblProtists:DDB0204739 GeneID:8622738 KEGG:ddi:DDB_G0280799
InParanoid:Q54UV1 ProtClustDB:CLSZ2430597 Uniprot:Q54UV1
Length = 42
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQGMST 41
M+ S++KK+C FC+ I+R V+V C AN +HKQ+QG T
Sbjct: 1 MRHVSALKKLCRFCQTIRRGKNVFVFCKANARHKQKQGWIT 41
>RGD|1306375 [details] [associations]
symbol:Mrpl36 "mitochondrial ribosomal protein L36"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR000473 Pfam:PF00444
RGD:1306375 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CH474002 PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022
CTD:64979 GeneTree:ENSGT00390000010866 HOGENOM:HOG000111586
OrthoDB:EOG4FN4KF eggNOG:NOG267357 EMBL:BC167015 IPI:IPI00360015
RefSeq:NP_001102349.1 RefSeq:XP_003748731.1 RefSeq:XP_003753204.1
UniGene:Rn.7601 ProteinModelPortal:B2RZ39 SMR:B2RZ39
Ensembl:ENSRNOT00000029531 GeneID:100910528 GeneID:364656
KEGG:rno:100910528 KEGG:rno:364656 UCSC:RGD:1306375 OMA:SAKPCAE
NextBio:685757 Genevestigator:B2RZ39 Uniprot:B2RZ39
Length = 97
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQ 37
K + +KK C C ++KRRGR +V+C N KHKQRQ
Sbjct: 61 KTKGVIKKRCRDCYMVKRRGRWFVLCKTNPKHKQRQ 96
>UNIPROTKB|G3MYN6 [details] [associations]
symbol:MRPL36 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 HAMAP:MF_00251 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 GeneTree:ENSGT00390000010866
EMBL:DAAA02051422 Ensembl:ENSBTAT00000064878 OMA:RAGPATH
Uniprot:G3MYN6
Length = 100
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQ 37
K + +KK C+ C ++KRRGR ++ C N KHKQRQ
Sbjct: 64 KTKGVLKKRCKGCYLVKRRGRWFIYCKTNPKHKQRQ 99
>MGI|MGI:2137228 [details] [associations]
symbol:Mrpl36 "mitochondrial ribosomal protein L36"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762
"mitochondrial large ribosomal subunit" evidence=ISO] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=ISO]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 MGI:MGI:2137228 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 CTD:64979
GeneTree:ENSGT00390000010866 HOGENOM:HOG000111586 OrthoDB:EOG4FN4KF
eggNOG:NOG267357 HOVERGEN:HBG029144 OMA:IKKRCKD EMBL:AB049655
EMBL:AK075780 EMBL:AK131597 EMBL:AK131601 EMBL:AK131604
EMBL:AK160778 EMBL:BC009166 IPI:IPI00118224 RefSeq:NP_444393.1
UniGene:Mm.26775 ProteinModelPortal:Q99N90 SMR:Q99N90 PRIDE:Q99N90
Ensembl:ENSMUST00000022098 GeneID:94066 KEGG:mmu:94066
UCSC:uc007rdi.1 InParanoid:Q99N90 NextBio:352049 Bgee:Q99N90
CleanEx:MM_MRPL36 Genevestigator:Q99N90
GermOnline:ENSMUSG00000021607 Uniprot:Q99N90
Length = 102
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQ 37
K + +KK C+ C +KRRGR +++C N KHKQRQ
Sbjct: 66 KTKGVIKKRCKDCYKVKRRGRWFILCKTNPKHKQRQ 101
>UNIPROTKB|I3LDE8 [details] [associations]
symbol:MRPL36 "Ribosomal protein" species:9823 "Sus scrofa"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 HAMAP:MF_00251 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 GeneTree:ENSGT00390000010866
OMA:GVIKERC EMBL:CU640453 RefSeq:XP_003134214.1
Ensembl:ENSSSCT00000026626 GeneID:100519932 KEGG:ssc:100519932
Uniprot:I3LDE8
Length = 100
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQ 37
K + +KK C C ++KRRGR ++ C N KHKQRQ
Sbjct: 64 KTKGVLKKRCRDCYLVKRRGRWFIYCKTNPKHKQRQ 99
>UNIPROTKB|E2RNM7 [details] [associations]
symbol:MRPL36 "Ribosomal protein" species:9615 "Canis lupus
familiaris" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR000473 Pfam:PF00444 HAMAP:MF_00251 GO:GO:0005739
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 CTD:64979
GeneTree:ENSGT00390000010866 EMBL:AAEX03017215 RefSeq:XP_545188.2
ProteinModelPortal:E2RNM7 Ensembl:ENSCAFT00000016580 GeneID:488065
KEGG:cfa:488065 OMA:GVIKERC NextBio:20861504 Uniprot:E2RNM7
Length = 110
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQ 37
K + +K+ C C +KRRGR Y+ C N KHKQRQ
Sbjct: 74 KTKGVIKERCRDCYRVKRRGRWYIYCKTNPKHKQRQ 109
>UNIPROTKB|Q9P0J6 [details] [associations]
symbol:MRPL36 "39S ribosomal protein L36, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005762 "mitochondrial large ribosomal
subunit" evidence=NAS] [GO:0006412 "translation" evidence=NAS]
InterPro:IPR000473 Pfam:PF00444 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 EMBL:CH471102 CleanEx:HS_BRIP1 PANTHER:PTHR18804
SUPFAM:SSF57840 TIGRFAMs:TIGR01022 CTD:64979 HOGENOM:HOG000111586
OrthoDB:EOG4FN4KF EMBL:AB049654 EMBL:AF151109 EMBL:EF036487
EMBL:AF155653 EMBL:AK312001 EMBL:BC020642 EMBL:BC104652
IPI:IPI00007622 RefSeq:NP_115868.1 UniGene:Hs.719465
ProteinModelPortal:Q9P0J6 SMR:Q9P0J6 IntAct:Q9P0J6 STRING:Q9P0J6
DMDM:24212267 PRIDE:Q9P0J6 DNASU:64979 Ensembl:ENST00000382647
Ensembl:ENST00000505059 Ensembl:ENST00000505818
Ensembl:ENST00000508987 GeneID:64979 KEGG:hsa:64979 UCSC:uc003jcx.4
GeneCards:GC05M001851 HGNC:HGNC:14490 HPA:HPA047238 MIM:611842
neXtProt:NX_Q9P0J6 PharmGKB:PA30967 eggNOG:NOG267357
HOVERGEN:HBG029144 InParanoid:Q9P0J6 OMA:IKKRCKD PhylomeDB:Q9P0J6
GenomeRNAi:64979 NextBio:67168 ArrayExpress:Q9P0J6 Bgee:Q9P0J6
CleanEx:HS_MRPL36 Genevestigator:Q9P0J6 GermOnline:ENSG00000171421
Uniprot:Q9P0J6
Length = 103
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 2 KVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQ 37
K ++ +KK C+ C ++KRRGR YV C + +HKQRQ
Sbjct: 67 KNKTVLKKRCKDCYLVKRRGRWYVYCKTHPRHKQRQ 102
>UNIPROTKB|Q9KTM3 [details] [associations]
symbol:rpmJ2 "50S ribosomal protein L36 2" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000473 Pfam:PF00444
PROSITE:PS00828 HAMAP:MF_00251 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022 KO:K02919
PIR:D82269 RefSeq:NP_230526.1 ProteinModelPortal:Q9KTM3
DNASU:2614546 GeneID:2614546 KEGG:vch:VC0879 PATRIC:20080858
eggNOG:COG0257 ProtClustDB:PRK00831 Uniprot:Q9KTM3
Length = 41
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 1 MKVRSSVKKMCEF---CKIIKRRGRVYVICSANLKHKQRQ 37
MKV SS+K C+I+KRRGR+YVIC +N + K Q
Sbjct: 1 MKVLSSLKSAKNRHPDCQIVKRRGRLYVICKSNPRFKAVQ 40
>TIGR_CMR|SPO_3284 [details] [associations]
symbol:SPO_3284 "ribosomal protein L36" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR000473 Pfam:PF00444 PROSITE:PS00828 HAMAP:MF_00251
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 SUPFAM:SSF57840 TIGRFAMs:TIGR01022 KO:K02919
eggNOG:COG0257 ProtClustDB:PRK00831 HOGENOM:HOG000111585
RefSeq:YP_168480.2 ProteinModelPortal:Q5LNC8 GeneID:3196292
KEGG:sil:SPO3284 PATRIC:23380011 Uniprot:Q5LNC8
Length = 41
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 1 MKVRSSVKKMCEF---CKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+S++ + C++++R+GRVYVI K K RQG
Sbjct: 1 MKVRNSLRSLKSRHRDCRVVRRKGRVYVINKTQRKFKARQG 41
>TIGR_CMR|VC_0879 [details] [associations]
symbol:VC_0879 "ribosomal protein L36, putative"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR000473 Pfam:PF00444
PROSITE:PS00828 HAMAP:MF_00251 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR18804 SUPFAM:SSF57840 TIGRFAMs:TIGR01022 KO:K02919
PIR:D82269 RefSeq:NP_230526.1 ProteinModelPortal:Q9KTM3
DNASU:2614546 GeneID:2614546 KEGG:vch:VC0879 PATRIC:20080858
eggNOG:COG0257 ProtClustDB:PRK00831 Uniprot:Q9KTM3
Length = 41
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 1 MKVRSSVKKMCEF---CKIIKRRGRVYVICSANLKHKQRQ 37
MKV SS+K C+I+KRRGR+YVIC +N + K Q
Sbjct: 1 MKVLSSLKSAKNRHPDCQIVKRRGRLYVICKSNPRFKAVQ 40
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.132 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 101 101 0.00091 102 3 11 22 0.36 30
29 0.47 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 567 (60 KB)
Total size of DFA: 124 KB (2080 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.22u 0.18s 9.40t Elapsed: 00:00:00
Total cpu time: 9.22u 0.18s 9.40t Elapsed: 00:00:00
Start: Fri May 10 17:31:17 2013 End: Fri May 10 17:31:17 2013