BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034201
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B2G8V5|RL36_LACRJ 50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM
1112) GN=rpmJ PE=3 SV=1
Length = 39
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVKKMCE CKI+KR GRV VICSAN KHKQRQG
Sbjct: 1 MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38
>sp|A5VLI2|RL36_LACRD 50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM
20016) GN=rpmJ PE=3 SV=1
Length = 39
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVKKMCE CKI+KR GRV VICSAN KHKQRQG
Sbjct: 1 MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38
>sp|Q74L67|RL36_LACJO 50S ribosomal protein L36 OS=Lactobacillus johnsonii (strain CNCM
I-12250 / La1 / NCC 533) GN=rpmJ PE=3 SV=1
Length = 38
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CKIIKR+GRV VICSAN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKIIKRQGRVMVICSANPKHKQRQG 38
>sp|Q03PY0|RL36_LACBA 50S ribosomal protein L36 OS=Lactobacillus brevis (strain ATCC
367 / JCM 1170) GN=rpmJ PE=3 SV=1
Length = 39
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CK+IKR+GRV VICSAN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIKRKGRVMVICSANPKHKQRQG 38
>sp|Q046A3|RL36_LACGA 50S ribosomal protein L36 OS=Lactobacillus gasseri (strain ATCC
33323 / DSM 20243) GN=rpmJ PE=3 SV=1
Length = 38
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CKIIKR GRV VICSAN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKIIKRHGRVMVICSANPKHKQRQG 38
>sp|P73300|RL36_SYNY3 50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=rpmJ PE=3 SV=1
Length = 38
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 35/38 (92%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVKKMC+ C++I+RRGRV VICSAN KHKQRQG
Sbjct: 1 MKVRASVKKMCDKCRVIRRRGRVMVICSANPKHKQRQG 38
>sp|B3WAJ5|RL36_LACCB 50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23)
GN=rpmJ PE=3 SV=1
Length = 38
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 34/38 (89%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVKKMCE CK+++R+GRV +ICSAN KHKQRQG
Sbjct: 1 MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38
>sp|Q035A6|RL36_LACC3 50S ribosomal protein L36 OS=Lactobacillus casei (strain ATCC
334) GN=rpmJ PE=3 SV=1
Length = 38
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 34/38 (89%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVKKMCE CK+++R+GRV +ICSAN KHKQRQG
Sbjct: 1 MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38
>sp|Q03ED9|RL36_PEDPA 50S ribosomal protein L36 OS=Pediococcus pentosaceus (strain ATCC
25745 / 183-1w) GN=rpmJ PE=3 SV=1
Length = 39
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CKII+R+GRV VICSAN KHKQRQG
Sbjct: 1 MKVRPSVKTMCEHCKIIRRKGRVMVICSANPKHKQRQG 38
>sp|Q38UT4|RL36_LACSS 50S ribosomal protein L36 OS=Lactobacillus sakei subsp. sakei
(strain 23K) GN=rpmJ PE=3 SV=1
Length = 38
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CK+IKR+GRV +IC+AN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIKRKGRVMIICAANPKHKQRQG 38
>sp|Q88XW3|RL36_LACPL 50S ribosomal protein L36 OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=rpmJ PE=3 SV=1
Length = 39
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CK+I+R+GRV +ICSAN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIRRKGRVMIICSANPKHKQRQG 38
>sp|Q04BZ2|RL36_LACDB 50S ribosomal protein L36 OS=Lactobacillus delbrueckii subsp.
bulgaricus (strain ATCC BAA-365) GN=rpmJ PE=3 SV=1
Length = 38
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CK+IKR GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIKRHGRVMVICPANPKHKQRQG 38
>sp|Q1GBJ5|RL36_LACDA 50S ribosomal protein L36 OS=Lactobacillus delbrueckii subsp.
bulgaricus (strain ATCC 11842 / DSM 20081) GN=rpmJ PE=3
SV=1
Length = 38
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CK+IKR GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIKRHGRVMVICPANPKHKQRQG 38
>sp|Q5FM68|RL36_LACAC 50S ribosomal protein L36 OS=Lactobacillus acidophilus (strain
ATCC 700396 / NCK56 / N2 / NCFM) GN=rpmJ PE=3 SV=1
Length = 38
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CK+IKR GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIKRHGRVMVICPANPKHKQRQG 38
>sp|Q839E1|RL36_ENTFA 50S ribosomal protein L36 OS=Enterococcus faecalis (strain ATCC
700802 / V583) GN=rpmJ PE=3 SV=1
Length = 38
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MCE CK+I+R+GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPMCEHCKVIRRKGRVMVICPANPKHKQRQG 38
>sp|C1CPB1|RL36_STRZT 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|C1CIC0|RL36_STRZP 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
P1031) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|C1CC29|RL36_STRZJ 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
JJA) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|A3CK87|RL36_STRSV 50S ribosomal protein L36 OS=Streptococcus sanguinis (strain
SK36) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|P0A496|RL36_STRR6 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
ATCC BAA-255 / R6) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|P0A495|RL36_STRPN 50S ribosomal protein L36 OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|B1I8M1|RL36_STRPI 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|C1CAN5|RL36_STRP7 50S ribosomal protein L36 OS=Streptococcus pneumoniae (strain
70585) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|A8AZK2|RL36_STRGC 50S ribosomal protein L36 OS=Streptococcus gordonii (strain
Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpmJ PE=3
SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|Q02W48|RL36_LACLS 50S ribosomal protein L36 OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|A2RNN0|RL36_LACLM 50S ribosomal protein L36 OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|P0A494|RL36_LACLC 50S ribosomal protein L36 OS=Lactococcus lactis subsp. cremoris
GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|P0A493|RL36_LACLA 50S ribosomal protein L36 OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=rpmJ PE=3 SV=1
Length = 38
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC AN KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPANPKHKQRQG 38
>sp|Q04G63|RL36_OENOB 50S ribosomal protein L36 OS=Oenococcus oeni (strain ATCC BAA-331
/ PSU-1) GN=rpmJ PE=3 SV=1
Length = 39
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/38 (76%), Positives = 32/38 (84%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK MC+ C++IKR GRV VICSAN KHKQRQG
Sbjct: 1 MKVRPSVKPMCDQCRVIKRNGRVMVICSANPKHKQRQG 38
>sp|Q7V9Y2|RL36_PROMA 50S ribosomal protein L36 OS=Prochlorococcus marinus (strain SARG
/ CCMP1375 / SS120) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVKKMCE C++I+R GRV VIC+A KHKQRQG
Sbjct: 1 MKVRASVKKMCEKCRVIRRHGRVMVICTATQKHKQRQG 38
>sp|A9BCM7|RL36_PROM4 50S ribosomal protein L36 OS=Prochlorococcus marinus (strain MIT
9211) GN=rpmJ PE=3 SV=1
Length = 38
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR+SVKKMCE C++I+R GRV VIC+A KHKQRQG
Sbjct: 1 MKVRASVKKMCEKCRVIRRHGRVMVICTATQKHKQRQG 38
>sp|B9DSX3|RL36_STRU0 50S ribosomal protein L36 OS=Streptococcus uberis (strain ATCC
BAA-854 / 0140J) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q03IH4|RL36_STRTD 50S ribosomal protein L36 OS=Streptococcus thermophilus (strain
ATCC BAA-491 / LMD-9) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q5M2D6|RL36_STRT2 50S ribosomal protein L36 OS=Streptococcus thermophilus (strain
ATCC BAA-250 / LMG 18311) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q5LXT4|RL36_STRT1 50S ribosomal protein L36 OS=Streptococcus thermophilus (strain
CNRZ 1066) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|C0ME28|RL36_STRS7 50S ribosomal protein L36 OS=Streptococcus equi subsp.
zooepidemicus (strain H70) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|B5XJ59|RL36_STRPZ 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M49
(strain NZ131) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|P0DE51|RL36_STRPQ 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q48VS6|RL36_STRPM 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M28
(strain MGAS6180) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|A2RC37|RL36_STRPG 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M5
(strain Manfredo) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q1J8Z0|RL36_STRPF 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M4
(strain MGAS10750) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q1JJ38|RL36_STRPD 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M2
(strain MGAS10270) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q1JNZ4|RL36_STRPC 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M12
(strain MGAS9429) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q1JE36|RL36_STRPB 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M12
(strain MGAS2096) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|P66305|RL36_STRP8 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|Q5XEB2|RL36_STRP6 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|P0DE50|RL36_STRP3 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|P66303|RL36_STRP1 50S ribosomal protein L36 OS=Streptococcus pyogenes serotype M1
GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|P66308|RL36_STRMU 50S ribosomal protein L36 OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
>sp|B4U523|RL36_STREM 50S ribosomal protein L36 OS=Streptococcus equi subsp.
zooepidemicus (strain MGCS10565) GN=rpmJ PE=3 SV=1
Length = 38
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 31/38 (81%)
Query: 1 MKVRSSVKKMCEFCKIIKRRGRVYVICSANLKHKQRQG 38
MKVR SVK +CE+CK+I+R GRV VIC N KHKQRQG
Sbjct: 1 MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG 38
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,793,525
Number of Sequences: 539616
Number of extensions: 1093996
Number of successful extensions: 3548
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 2344
Number of HSP's gapped (non-prelim): 878
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)