Query 034203
Match_columns 101
No_of_seqs 113 out of 649
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 18:41:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034203.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034203hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u5r_E Uncharacterized protein 99.8 2.5E-20 8.7E-25 134.1 9.4 88 8-99 122-209 (218)
2 2ywi_A Hypothetical conserved 99.8 3.4E-18 1.2E-22 118.7 9.4 88 8-99 109-196 (196)
3 2cvb_A Probable thiol-disulfid 99.7 5.5E-18 1.9E-22 117.5 8.3 87 8-99 95-181 (188)
4 1n8j_A AHPC, alkyl hydroperoxi 99.4 1.1E-12 3.8E-17 91.9 6.5 78 8-99 90-173 (186)
5 1zye_A Thioredoxin-dependent p 99.3 2.4E-12 8.1E-17 92.8 8.0 77 8-99 119-201 (220)
6 2i81_A 2-Cys peroxiredoxin; st 99.3 1.2E-12 4.1E-17 94.1 5.5 77 8-99 115-196 (213)
7 2pn8_A Peroxiredoxin-4; thiore 99.3 2.5E-12 8.7E-17 92.3 5.4 77 8-99 111-193 (211)
8 1qmv_A Human thioredoxin perox 99.3 2.9E-12 9.9E-17 89.9 5.4 77 8-99 97-179 (197)
9 3ztl_A Thioredoxin peroxidase; 99.3 9.9E-13 3.4E-17 94.8 2.3 77 8-99 132-214 (222)
10 2h01_A 2-Cys peroxiredoxin; th 99.2 7.1E-12 2.4E-16 87.4 5.1 77 8-99 94-175 (192)
11 2c0d_A Thioredoxin peroxidase 99.2 1.4E-11 4.9E-16 89.4 5.9 77 8-99 119-200 (221)
12 1uul_A Tryparedoxin peroxidase 99.2 1.3E-11 4.6E-16 86.9 5.4 77 8-99 99-181 (202)
13 1we0_A Alkyl hydroperoxide red 99.2 3.5E-11 1.2E-15 83.4 6.3 78 8-99 91-174 (187)
14 3qpm_A Peroxiredoxin; oxidored 99.2 2.5E-11 8.6E-16 89.0 5.1 77 8-99 140-222 (240)
15 3tjj_A Peroxiredoxin-4; thiore 99.1 4.6E-11 1.6E-15 88.7 5.2 77 8-99 154-236 (254)
16 2bmx_A Alkyl hydroperoxidase C 99.1 3.8E-10 1.3E-14 78.9 7.9 73 8-99 105-182 (195)
17 2v2g_A Peroxiredoxin 6; oxidor 99.1 1.9E-10 6.4E-15 84.6 5.5 77 8-99 93-181 (233)
18 3eyt_A Uncharacterized protein 99.0 8.6E-10 2.9E-14 73.4 7.6 62 7-81 90-156 (158)
19 3lor_A Thiol-disulfide isomera 99.0 9.9E-10 3.4E-14 73.0 7.4 61 7-80 92-158 (160)
20 1zof_A Alkyl hydroperoxide-red 99.0 6.5E-10 2.2E-14 77.7 6.4 77 7-98 95-176 (198)
21 3a2v_A Probable peroxiredoxin; 99.0 5.4E-10 1.9E-14 83.2 5.0 74 8-97 95-175 (249)
22 1prx_A HORF6; peroxiredoxin, h 98.9 6.9E-10 2.4E-14 80.6 5.1 78 7-99 96-185 (224)
23 1xcc_A 1-Cys peroxiredoxin; un 98.9 1E-09 3.5E-14 79.5 5.4 78 7-99 93-182 (220)
24 2f9s_A Thiol-disulfide oxidore 98.9 2.6E-09 9E-14 70.6 6.9 63 8-83 82-144 (151)
25 2l5o_A Putative thioredoxin; s 98.9 5.6E-09 1.9E-13 68.9 7.6 63 8-83 85-147 (153)
26 4g2e_A Peroxiredoxin; redox pr 98.9 5E-09 1.7E-13 71.4 7.4 61 7-75 85-156 (157)
27 2b5x_A YKUV protein, TRXY; thi 98.9 5.7E-09 2E-13 67.8 7.3 59 8-79 89-147 (148)
28 3gl3_A Putative thiol:disulfid 98.9 9.1E-09 3.1E-13 67.8 7.4 66 7-83 83-148 (152)
29 3kcm_A Thioredoxin family prot 98.8 7.7E-09 2.6E-13 68.3 5.8 65 8-83 85-149 (154)
30 1lu4_A Soluble secreted antige 98.8 1.6E-08 5.4E-13 65.0 6.6 56 8-77 78-136 (136)
31 1zzo_A RV1677; thioredoxin fol 98.8 2.7E-08 9.2E-13 63.6 6.9 56 8-77 79-135 (136)
32 3ha9_A Uncharacterized thiored 98.7 2.5E-08 8.6E-13 66.9 6.5 56 8-78 109-165 (165)
33 3raz_A Thioredoxin-related pro 98.7 3.7E-08 1.3E-12 65.3 7.1 63 7-82 78-145 (151)
34 4gqc_A Thiol peroxidase, perox 98.7 5E-08 1.7E-12 67.1 8.0 62 7-76 88-159 (164)
35 4evm_A Thioredoxin family prot 98.7 4.1E-08 1.4E-12 62.4 6.8 53 10-75 85-137 (138)
36 3gkn_A Bacterioferritin comigr 98.7 5.2E-08 1.8E-12 65.3 6.8 60 8-77 91-162 (163)
37 3ia1_A THIO-disulfide isomeras 98.7 2.2E-08 7.5E-13 66.2 4.8 62 8-82 85-149 (154)
38 3drn_A Peroxiredoxin, bacterio 98.7 5.8E-08 2E-12 65.5 6.8 62 8-78 85-150 (161)
39 2h30_A Thioredoxin, peptide me 98.6 5.5E-08 1.9E-12 64.7 6.1 58 8-78 99-157 (164)
40 1kng_A Thiol:disulfide interch 98.6 7.6E-08 2.6E-12 63.4 6.6 57 8-77 95-152 (156)
41 3erw_A Sporulation thiol-disul 98.6 8.1E-08 2.8E-12 62.1 6.0 45 7-53 92-136 (145)
42 1xvw_A Hypothetical protein RV 98.6 1.2E-07 4.1E-12 63.2 6.6 60 8-76 92-159 (160)
43 2lrn_A Thiol:disulfide interch 98.6 3.6E-07 1.2E-11 60.5 8.9 61 8-84 85-148 (152)
44 2jsy_A Probable thiol peroxida 98.6 2.1E-07 7.1E-12 62.7 7.8 62 8-77 98-167 (167)
45 3kh7_A Thiol:disulfide interch 98.6 1.2E-07 4E-12 65.2 6.7 44 8-53 110-154 (176)
46 4eo3_A Bacterioferritin comigr 98.6 1.2E-07 4.2E-12 72.4 7.1 61 7-77 75-139 (322)
47 1jfu_A Thiol:disulfide interch 98.6 8.4E-08 2.9E-12 65.6 5.5 62 8-80 117-183 (186)
48 3lwa_A Secreted thiol-disulfid 98.6 9.5E-08 3.2E-12 65.3 5.7 59 7-78 121-182 (183)
49 3hdc_A Thioredoxin family prot 98.6 1.4E-07 4.6E-12 63.1 6.3 46 7-54 93-138 (158)
50 3tue_A Tryparedoxin peroxidase 98.6 1E-07 3.6E-12 70.1 6.0 77 8-99 119-201 (219)
51 2hyx_A Protein DIPZ; thioredox 98.5 1.3E-07 4.6E-12 73.3 6.8 59 8-79 143-201 (352)
52 3ixr_A Bacterioferritin comigr 98.5 2.2E-07 7.6E-12 64.2 7.0 60 8-77 107-178 (179)
53 3sbc_A Peroxiredoxin TSA1; alp 98.5 2.7E-07 9.1E-12 67.8 7.6 77 8-99 115-197 (216)
54 1xzo_A BSSCO, hypothetical pro 98.5 1.9E-07 6.6E-12 62.7 6.0 61 8-79 95-174 (174)
55 3fw2_A Thiol-disulfide oxidore 98.5 2.6E-07 9E-12 61.1 6.5 55 7-77 91-148 (150)
56 3keb_A Probable thiol peroxida 98.5 4E-07 1.4E-11 67.1 8.1 63 8-78 104-177 (224)
57 2b1k_A Thiol:disulfide interch 98.5 2.3E-07 8E-12 62.2 6.1 56 8-76 103-159 (168)
58 1psq_A Probable thiol peroxida 98.5 4.1E-07 1.4E-11 61.5 7.4 59 8-74 96-162 (163)
59 3p7x_A Probable thiol peroxida 98.5 3.4E-07 1.2E-11 62.1 6.9 40 8-51 99-146 (166)
60 2lrt_A Uncharacterized protein 98.5 2.3E-07 8E-12 62.1 6.0 57 7-79 88-147 (152)
61 3or5_A Thiol:disulfide interch 98.5 4.5E-07 1.5E-11 60.1 7.1 60 7-80 89-154 (165)
62 3fkf_A Thiol-disulfide oxidore 98.5 3.2E-07 1.1E-11 59.5 6.2 56 7-78 89-147 (148)
63 2lja_A Putative thiol-disulfid 98.5 2.9E-07 9.9E-12 60.4 5.6 58 11-81 90-147 (152)
64 3ewl_A Uncharacterized conserv 98.4 2.9E-07 9.8E-12 59.9 5.2 54 7-76 85-140 (142)
65 2ggt_A SCO1 protein homolog, m 98.4 4E-07 1.4E-11 60.4 5.6 58 8-78 87-162 (164)
66 2yzh_A Probable thiol peroxida 98.4 4.1E-07 1.4E-11 61.9 5.7 60 8-76 101-171 (171)
67 1xvq_A Thiol peroxidase; thior 98.4 7.9E-07 2.7E-11 61.0 6.7 60 8-79 97-167 (175)
68 3hcz_A Possible thiol-disulfid 98.4 5.3E-07 1.8E-11 58.5 5.5 41 8-50 87-130 (148)
69 3zrd_A Thiol peroxidase; oxido 98.4 9.4E-07 3.2E-11 62.5 6.6 40 8-51 132-182 (200)
70 2a4v_A Peroxiredoxin DOT5; yea 98.3 7.3E-07 2.5E-11 59.8 4.9 41 8-51 90-136 (159)
71 2rli_A SCO2 protein homolog, m 98.3 2E-06 6.7E-11 57.5 6.9 58 8-78 90-165 (171)
72 1q98_A Thiol peroxidase, TPX; 98.3 1.4E-06 4.9E-11 59.0 5.9 41 8-50 97-148 (165)
73 3mng_A Peroxiredoxin-5, mitoch 98.2 2.2E-06 7.4E-11 59.9 6.0 39 8-51 101-154 (173)
74 2v1m_A Glutathione peroxidase; 98.2 6.6E-07 2.2E-11 59.7 3.1 60 7-79 94-169 (169)
75 2ls5_A Uncharacterized protein 97.5 1.8E-07 6.2E-12 62.3 0.0 59 8-80 91-151 (159)
76 2k6v_A Putative cytochrome C o 98.2 1.9E-06 6.6E-11 57.5 4.9 57 8-76 98-172 (172)
77 1tp9_A Peroxiredoxin, PRX D (t 98.2 2.1E-06 7E-11 58.3 5.0 38 8-50 93-143 (162)
78 3dwv_A Glutathione peroxidase- 98.1 8.6E-07 2.9E-11 61.4 2.5 60 8-80 110-186 (187)
79 3uma_A Hypothetical peroxiredo 98.1 4.4E-06 1.5E-10 58.9 5.3 40 8-50 114-166 (184)
80 3eur_A Uncharacterized protein 98.1 5.3E-06 1.8E-10 54.2 5.0 40 8-51 90-131 (142)
81 2l57_A Uncharacterized protein 98.1 1.5E-05 5E-10 51.2 6.9 55 15-82 68-122 (126)
82 4fo5_A Thioredoxin-like protei 98.1 4.7E-06 1.6E-10 54.5 4.6 39 8-50 88-130 (143)
83 2wfc_A Peroxiredoxin 5, PRDX5; 98.0 1.3E-05 4.4E-10 55.2 6.6 38 8-50 89-139 (167)
84 2vup_A Glutathione peroxidase- 98.0 3.4E-06 1.2E-10 58.4 3.3 60 7-79 111-187 (190)
85 2p5q_A Glutathione peroxidase 98.0 2.4E-06 8.4E-11 56.9 2.4 58 8-78 96-169 (170)
86 3cmi_A Peroxiredoxin HYR1; thi 98.0 3.6E-06 1.2E-10 57.0 2.7 58 8-78 95-169 (171)
87 2pwj_A Mitochondrial peroxired 97.9 1.1E-05 3.7E-10 55.6 4.9 39 9-50 104-153 (171)
88 2l5l_A Thioredoxin; structural 97.9 4E-05 1.4E-09 50.1 7.3 57 13-83 76-132 (136)
89 2ju5_A Thioredoxin disulfide i 97.9 2.5E-05 8.7E-10 52.5 6.5 51 16-78 103-153 (154)
90 2kuc_A Putative disulphide-iso 97.9 3.9E-05 1.3E-09 49.1 7.1 52 17-81 74-125 (130)
91 3hxs_A Thioredoxin, TRXP; elec 97.9 2.9E-05 1E-09 50.5 5.9 53 12-78 88-140 (141)
92 1nm3_A Protein HI0572; hybrid, 97.9 2.4E-05 8.1E-10 56.0 5.7 41 8-51 91-143 (241)
93 2f8a_A Glutathione peroxidase 97.9 7.1E-06 2.4E-10 58.4 2.8 38 27-77 170-207 (208)
94 2p31_A CL683, glutathione pero 97.8 2.5E-06 8.5E-11 58.6 0.3 58 7-77 112-181 (181)
95 2gs3_A PHGPX, GPX-4, phospholi 97.8 6.2E-06 2.1E-10 56.8 1.1 57 7-76 111-185 (185)
96 2obi_A PHGPX, GPX-4, phospholi 97.7 5.8E-06 2E-10 56.6 0.8 57 7-76 109-183 (183)
97 3me7_A Putative uncharacterize 97.7 9.3E-05 3.2E-09 50.4 6.6 54 17-82 105-167 (170)
98 3fk8_A Disulphide isomerase; A 97.6 0.00012 4.2E-09 47.1 5.7 54 16-76 75-132 (133)
99 2b7k_A SCO1 protein; metalloch 97.6 0.00012 4.1E-09 51.1 6.0 44 8-53 104-166 (200)
100 2trx_A Thioredoxin; electron t 97.6 0.00016 5.3E-09 44.6 5.5 49 15-77 60-108 (108)
101 1thx_A Thioredoxin, thioredoxi 97.6 0.00017 5.9E-09 44.6 5.7 52 13-78 63-114 (115)
102 2i3y_A Epididymal secretory gl 97.6 0.00018 6.1E-09 51.8 6.4 36 30-78 177-212 (215)
103 2es7_A Q8ZP25_salty, putative 97.5 8.4E-05 2.9E-09 50.2 4.4 54 13-80 75-128 (142)
104 2r37_A Glutathione peroxidase 97.5 0.0001 3.5E-09 52.6 4.7 36 30-78 159-194 (207)
105 1dby_A Chloroplast thioredoxin 97.5 0.00027 9.1E-09 43.4 6.0 49 15-77 59-107 (107)
106 2e0q_A Thioredoxin; electron t 97.5 0.00031 1.1E-08 42.3 5.9 49 15-77 55-103 (104)
107 2fwh_A Thiol:disulfide interch 97.5 6.6E-05 2.3E-09 49.0 2.8 46 16-74 78-125 (134)
108 3d22_A TRXH4, thioredoxin H-ty 97.4 0.0003 1E-08 45.5 5.9 60 8-82 77-137 (139)
109 1v98_A Thioredoxin; oxidoreduc 97.4 0.00033 1.1E-08 45.6 6.0 52 14-79 89-140 (140)
110 3tco_A Thioredoxin (TRXA-1); d 97.4 0.00025 8.5E-09 43.4 5.1 50 13-76 59-108 (109)
111 1x5d_A Protein disulfide-isome 97.4 0.00029 9.9E-09 44.9 5.3 52 15-80 69-120 (133)
112 1nsw_A Thioredoxin, TRX; therm 97.4 0.00014 4.8E-09 44.6 3.5 48 15-76 57-104 (105)
113 1t00_A Thioredoxin, TRX; redox 97.4 0.00035 1.2E-08 43.3 5.4 51 13-77 61-111 (112)
114 1i5g_A Tryparedoxin II; electr 97.4 5.6E-05 1.9E-09 49.2 1.7 38 9-50 87-126 (144)
115 1w4v_A Thioredoxin, mitochondr 97.4 0.00046 1.6E-08 43.8 5.8 48 15-76 71-118 (119)
116 1xiy_A Peroxiredoxin, pfaop; a 97.3 0.00073 2.5E-08 47.7 7.0 38 8-50 102-151 (182)
117 1o8x_A Tryparedoxin, TRYX, TXN 97.3 7.3E-05 2.5E-09 48.8 1.6 33 9-41 87-121 (146)
118 2pu9_C TRX-F, thioredoxin F-ty 97.3 0.00083 2.8E-08 41.7 6.5 45 17-76 66-110 (111)
119 2dj1_A Protein disulfide-isome 97.3 0.00081 2.8E-08 43.3 6.6 52 16-82 78-129 (140)
120 2lus_A Thioredoxion; CR-Trp16, 96.4 3.7E-05 1.3E-09 49.5 0.0 31 11-41 90-120 (143)
121 2i4a_A Thioredoxin; acidophIle 97.3 0.00038 1.3E-08 42.5 4.7 47 15-75 60-106 (107)
122 1ep7_A Thioredoxin CH1, H-type 97.3 0.00077 2.7E-08 41.6 6.0 49 14-77 63-111 (112)
123 3f9u_A Putative exported cytoc 97.3 0.00017 5.7E-09 48.6 3.0 30 22-53 123-152 (172)
124 2yzu_A Thioredoxin; redox prot 97.2 0.00038 1.3E-08 42.4 4.3 50 15-78 58-107 (109)
125 2voc_A Thioredoxin; electron t 97.2 0.00047 1.6E-08 43.3 4.8 52 14-79 56-107 (112)
126 2o8v_B Thioredoxin 1; disulfid 97.2 0.00029 1E-08 45.8 3.7 49 15-77 80-128 (128)
127 2dml_A Protein disulfide-isome 97.2 0.0006 2.1E-08 43.4 5.1 52 14-78 74-125 (130)
128 2ppt_A Thioredoxin-2; thiredox 97.2 0.00073 2.5E-08 45.5 5.7 51 15-79 104-154 (155)
129 2lst_A Thioredoxin; structural 96.3 5.5E-05 1.9E-09 48.5 0.0 56 16-84 65-123 (130)
130 3p2a_A Thioredoxin 2, putative 97.2 0.0008 2.7E-08 44.1 5.6 54 13-80 93-146 (148)
131 1fb6_A Thioredoxin M; electron 97.2 0.001 3.4E-08 40.4 5.7 50 13-76 56-105 (105)
132 3die_A Thioredoxin, TRX; elect 97.2 0.00059 2E-08 41.5 4.6 49 13-75 57-105 (106)
133 3qfa_C Thioredoxin; protein-pr 97.2 0.001 3.5E-08 42.2 5.8 49 13-76 68-116 (116)
134 4f82_A Thioredoxin reductase; 97.1 0.0005 1.7E-08 48.7 4.6 39 8-51 105-156 (176)
135 3gnj_A Thioredoxin domain prot 97.1 0.001 3.6E-08 40.8 5.6 51 13-77 60-110 (111)
136 1oaz_A Thioredoxin 1; immune s 97.1 0.00026 8.8E-09 45.9 2.7 50 13-76 73-122 (123)
137 1o73_A Tryparedoxin; electron 97.1 0.00016 5.3E-09 46.8 1.7 32 10-41 88-121 (144)
138 3s9f_A Tryparedoxin; thioredox 97.1 0.00015 5.1E-09 49.1 1.6 38 10-51 108-147 (165)
139 2l6c_A Thioredoxin; oxidoreduc 97.0 0.00093 3.2E-08 41.9 4.8 49 15-77 58-106 (110)
140 3f3q_A Thioredoxin-1; His TAG, 97.0 0.0017 5.8E-08 40.6 5.7 56 6-76 53-109 (109)
141 3m9j_A Thioredoxin; oxidoreduc 97.0 0.0014 4.6E-08 39.9 5.1 49 13-76 57-105 (105)
142 2wz9_A Glutaredoxin-3; protein 97.0 0.002 7E-08 42.7 6.3 59 8-81 63-122 (153)
143 2qgv_A Hydrogenase-1 operon pr 97.0 0.0011 3.9E-08 45.4 5.2 53 13-79 75-127 (140)
144 1xfl_A Thioredoxin H1; AT3G510 97.0 0.0013 4.6E-08 42.3 5.2 49 14-77 76-124 (124)
145 3kij_A Probable glutathione pe 97.0 0.00043 1.5E-08 47.1 2.9 63 7-78 101-175 (180)
146 2j23_A Thioredoxin; immune pro 97.0 0.0015 5.2E-08 41.6 5.3 50 13-77 72-121 (121)
147 3cxg_A Putative thioredoxin; m 97.0 0.001 3.5E-08 43.4 4.6 52 15-78 78-130 (133)
148 2vlu_A Thioredoxin, thioredoxi 96.9 0.0019 6.5E-08 40.6 5.3 49 15-78 73-121 (122)
149 3emx_A Thioredoxin; structural 96.9 0.0015 5.3E-08 42.5 4.9 51 16-80 79-129 (135)
150 1xwb_A Thioredoxin; dimerizati 96.9 0.0017 5.7E-08 39.4 4.7 48 14-76 59-106 (106)
151 1ti3_A Thioredoxin H, PTTRXH1; 96.9 0.0019 6.4E-08 39.8 4.9 48 15-77 65-112 (113)
152 1faa_A Thioredoxin F; electron 96.9 0.0022 7.5E-08 40.5 5.4 45 17-76 79-123 (124)
153 1x5e_A Thioredoxin domain cont 96.8 0.00089 3.1E-08 42.6 3.4 50 15-79 63-112 (126)
154 4euy_A Uncharacterized protein 96.8 0.0017 6E-08 40.0 4.6 50 13-76 55-104 (105)
155 2vim_A Thioredoxin, TRX; thior 96.8 0.0027 9.1E-08 38.4 5.4 47 15-76 58-104 (104)
156 2i1u_A Thioredoxin, TRX, MPT46 96.8 0.00087 3E-08 41.9 3.2 52 13-78 68-119 (121)
157 2vm1_A Thioredoxin, thioredoxi 96.8 0.0031 1.1E-07 39.0 5.7 56 8-78 59-115 (118)
158 2xc2_A Thioredoxinn; oxidoredu 96.8 0.0024 8.3E-08 40.0 5.1 47 15-76 71-117 (117)
159 1r26_A Thioredoxin; redox-acti 96.8 0.0028 9.7E-08 41.0 5.6 51 13-78 74-124 (125)
160 4hde_A SCO1/SENC family lipopr 96.8 0.0032 1.1E-07 42.9 6.0 39 28-77 132-170 (170)
161 3hz4_A Thioredoxin; NYSGXRC, P 96.8 0.0025 8.6E-08 41.6 5.3 52 13-78 62-113 (140)
162 1syr_A Thioredoxin; SGPP, stru 96.8 0.0016 5.6E-08 40.6 4.2 55 7-76 56-111 (112)
163 1nho_A Probable thioredoxin; b 96.8 0.0012 4.1E-08 38.7 3.3 44 15-76 41-84 (85)
164 2qsi_A Putative hydrogenase ex 96.7 0.0033 1.1E-07 42.9 5.7 52 13-78 73-124 (137)
165 3apq_A DNAJ homolog subfamily 96.7 0.0035 1.2E-07 43.7 5.9 54 15-82 154-207 (210)
166 3aps_A DNAJ homolog subfamily 96.7 0.0018 6E-08 40.7 3.8 55 15-79 61-115 (122)
167 2xhf_A Peroxiredoxin 5; oxidor 96.7 0.0028 9.7E-08 44.4 5.2 37 10-51 103-150 (171)
168 3d6i_A Monothiol glutaredoxin- 96.7 0.0034 1.2E-07 38.8 5.1 55 8-77 54-109 (112)
169 1gh2_A Thioredoxin-like protei 96.6 0.0044 1.5E-07 38.0 5.5 47 15-76 60-106 (107)
170 3zzx_A Thioredoxin; oxidoreduc 96.6 0.0042 1.4E-07 39.5 5.2 45 15-74 59-103 (105)
171 2yj7_A LPBCA thioredoxin; oxid 95.6 0.00034 1.2E-08 42.3 0.0 48 14-75 58-105 (106)
172 3ul3_B Thioredoxin, thioredoxi 96.5 0.0027 9.2E-08 40.7 4.0 37 13-52 80-116 (128)
173 1mek_A Protein disulfide isome 96.4 0.002 6.8E-08 39.7 2.8 48 16-77 68-117 (120)
174 3dxb_A Thioredoxin N-terminall 96.3 0.0045 1.5E-07 43.6 4.7 57 13-83 68-124 (222)
175 3uvt_A Thioredoxin domain-cont 96.3 0.0079 2.7E-07 36.6 5.2 46 15-74 64-109 (111)
176 1fo5_A Thioredoxin; disulfide 96.3 0.0017 5.9E-08 38.0 1.8 44 15-76 42-85 (85)
177 1wmj_A Thioredoxin H-type; str 96.1 0.0021 7.4E-08 40.6 1.8 52 15-81 75-126 (130)
178 1a8l_A Protein disulfide oxido 96.1 0.011 3.7E-07 40.9 5.6 49 14-76 177-225 (226)
179 3gix_A Thioredoxin-like protei 96.1 0.0084 2.9E-07 40.0 4.7 62 13-78 61-122 (149)
180 3h79_A Thioredoxin-like protei 96.1 0.011 3.7E-07 37.6 5.0 47 15-74 78-125 (127)
181 3idv_A Protein disulfide-isome 95.9 0.022 7.5E-07 39.4 6.5 50 15-79 75-124 (241)
182 3q6o_A Sulfhydryl oxidase 1; p 95.8 0.021 7.3E-07 40.4 6.1 42 7-51 183-224 (244)
183 2djk_A PDI, protein disulfide- 95.7 0.012 4.1E-07 38.3 4.1 51 16-80 63-118 (133)
184 1sen_A Thioredoxin-like protei 95.6 0.01 3.5E-07 40.1 3.7 64 13-79 84-150 (164)
185 1zma_A Bacterocin transport ac 95.6 0.0099 3.4E-07 37.2 3.4 31 18-51 76-106 (118)
186 2f51_A Thioredoxin; electron t 95.6 0.017 5.7E-07 36.6 4.5 55 8-76 54-112 (118)
187 2dlx_A UBX domain-containing p 95.6 0.025 8.6E-07 38.7 5.6 57 18-88 90-147 (153)
188 3qou_A Protein YBBN; thioredox 95.6 0.016 5.6E-07 41.6 4.9 38 13-53 64-101 (287)
189 1v58_A Thiol:disulfide interch 95.6 0.0081 2.8E-07 43.3 3.2 49 15-77 185-233 (241)
190 2oe3_A Thioredoxin-3; electron 95.6 0.0087 3E-07 37.8 3.0 34 15-51 69-102 (114)
191 1qgv_A Spliceosomal protein U5 95.4 0.0098 3.4E-07 39.3 2.8 61 14-78 62-122 (142)
192 3dml_A Putative uncharacterize 95.3 0.0072 2.5E-07 40.0 1.8 47 19-79 66-112 (116)
193 2dj3_A Protein disulfide-isome 95.1 0.019 6.4E-07 36.4 3.5 53 16-79 68-120 (133)
194 1ilo_A Conserved hypothetical 94.9 0.059 2E-06 30.8 4.9 28 18-52 39-66 (77)
195 3ph9_A Anterior gradient prote 94.8 0.023 7.8E-07 38.7 3.4 63 12-77 82-145 (151)
196 2hls_A Protein disulfide oxido 94.8 0.069 2.4E-06 38.3 6.1 45 16-78 183-227 (243)
197 3gyk_A 27KDA outer membrane pr 94.6 0.041 1.4E-06 36.7 4.2 44 15-77 130-173 (175)
198 1ttz_A Conserved hypothetical 94.5 0.03 1E-06 34.7 3.1 47 13-78 32-78 (87)
199 4dvc_A Thiol:disulfide interch 94.5 0.058 2E-06 35.8 4.8 47 17-79 138-184 (184)
200 3t58_A Sulfhydryl oxidase 1; o 94.3 0.13 4.5E-06 41.3 7.3 52 16-80 76-130 (519)
201 3gv1_A Disulfide interchange p 94.3 0.033 1.1E-06 37.7 3.3 46 15-78 95-140 (147)
202 2dj0_A Thioredoxin-related tra 94.3 0.067 2.3E-06 34.3 4.5 38 15-55 67-110 (137)
203 3iv4_A Putative oxidoreductase 94.0 0.087 3E-06 34.8 4.8 28 13-41 60-92 (112)
204 2ywm_A Glutaredoxin-like prote 94.0 0.06 2.1E-06 37.3 4.2 46 15-77 175-220 (229)
205 2ywm_A Glutaredoxin-like prote 93.9 0.15 5E-06 35.3 6.0 35 16-53 68-102 (229)
206 3gha_A Disulfide bond formatio 93.8 0.077 2.6E-06 37.2 4.5 44 17-79 151-194 (202)
207 3idv_A Protein disulfide-isome 93.8 0.1 3.4E-06 36.0 5.0 54 9-77 183-237 (241)
208 3feu_A Putative lipoprotein; a 93.8 0.097 3.3E-06 36.0 4.9 45 17-77 140-184 (185)
209 3ira_A Conserved protein; meth 93.8 0.2 6.7E-06 34.9 6.5 36 12-51 79-122 (173)
210 3f4s_A Alpha-DSBA1, putative u 93.7 0.065 2.2E-06 38.5 3.9 57 18-82 159-216 (226)
211 3q6o_A Sulfhydryl oxidase 1; p 93.6 0.1 3.5E-06 36.8 4.9 53 16-80 76-130 (244)
212 3h93_A Thiol:disulfide interch 93.5 0.059 2E-06 36.6 3.3 47 16-78 139-185 (192)
213 1sji_A Calsequestrin 2, calseq 93.3 0.086 2.9E-06 39.3 4.2 35 15-53 75-109 (350)
214 2znm_A Thiol:disulfide interch 93.3 0.067 2.3E-06 36.2 3.3 46 15-78 136-181 (195)
215 1eej_A Thiol:disulfide interch 93.0 0.058 2E-06 37.9 2.7 47 12-76 164-210 (216)
216 2in3_A Hypothetical protein; D 92.8 0.17 5.9E-06 34.7 4.9 49 16-78 163-211 (216)
217 3t58_A Sulfhydryl oxidase 1; o 92.7 0.23 7.9E-06 39.9 6.2 35 7-41 183-217 (519)
218 2av4_A Thioredoxin-like protei 92.6 0.045 1.5E-06 38.4 1.6 61 13-78 79-140 (160)
219 2rem_A Disulfide oxidoreductas 92.4 0.17 5.8E-06 34.1 4.3 45 15-78 141-185 (193)
220 2k8s_A Thioredoxin; dimer, str 92.1 0.12 4.1E-06 30.3 3.0 30 17-53 43-72 (80)
221 3bci_A Disulfide bond protein 92.1 0.17 5.8E-06 34.2 4.0 43 18-79 138-180 (186)
222 3gl5_A Putative DSBA oxidoredu 91.9 0.49 1.7E-05 33.9 6.6 46 18-81 172-217 (239)
223 2djj_A PDI, protein disulfide- 91.5 0.14 4.9E-06 31.5 2.9 43 20-77 74-117 (121)
224 1t3b_A Thiol:disulfide interch 91.2 0.13 4.4E-06 36.1 2.7 42 15-74 167-208 (211)
225 1a8l_A Protein disulfide oxido 91.1 0.53 1.8E-05 32.2 5.8 34 18-53 67-100 (226)
226 3kp8_A Vkorc1/thioredoxin doma 90.9 0.23 7.9E-06 31.2 3.5 29 17-53 54-82 (106)
227 3gmf_A Protein-disulfide isome 90.5 0.47 1.6E-05 33.4 5.1 42 18-78 156-198 (205)
228 1wou_A Thioredoxin -related pr 90.5 0.15 5.3E-06 32.2 2.4 25 16-40 79-103 (123)
229 3us3_A Calsequestrin-1; calciu 90.4 0.47 1.6E-05 35.8 5.4 48 15-77 77-124 (367)
230 3c7m_A Thiol:disulfide interch 90.4 0.16 5.6E-06 34.0 2.6 46 16-77 149-194 (195)
231 3qcp_A QSOX from trypanosoma b 89.8 0.14 4.7E-06 41.2 2.1 63 15-78 90-153 (470)
232 3f8u_A Protein disulfide-isome 89.7 0.42 1.4E-05 36.8 4.7 50 13-76 59-108 (481)
233 3evi_A Phosducin-like protein 89.6 0.68 2.3E-05 29.8 5.0 60 5-73 51-110 (118)
234 3uem_A Protein disulfide-isome 89.3 1.2 4E-05 32.8 6.7 54 18-82 180-235 (361)
235 1z6n_A Hypothetical protein PA 89.2 0.18 6.3E-06 34.5 2.1 34 8-41 85-122 (167)
236 2r2j_A Thioredoxin domain-cont 88.7 0.58 2E-05 35.3 4.8 49 16-78 69-118 (382)
237 3hz8_A Thiol:disulfide interch 88.5 0.81 2.8E-05 31.3 5.0 43 17-78 142-184 (193)
238 1z6m_A Conserved hypothetical 88.1 0.4 1.4E-05 31.8 3.1 22 16-40 136-157 (175)
239 3apo_A DNAJ homolog subfamily 88.0 0.79 2.7E-05 37.6 5.4 47 16-77 496-542 (780)
240 3f8u_A Protein disulfide-isome 88.0 0.53 1.8E-05 36.2 4.2 50 19-80 415-464 (481)
241 3kzq_A Putative uncharacterize 87.7 0.74 2.5E-05 31.6 4.5 49 17-79 157-205 (208)
242 1wjk_A C330018D20RIK protein; 87.0 0.82 2.8E-05 28.2 4.0 42 17-77 55-96 (100)
243 2b5e_A Protein disulfide-isome 86.8 1 3.5E-05 34.9 5.2 48 16-77 73-122 (504)
244 3hd5_A Thiol:disulfide interch 86.4 0.7 2.4E-05 31.2 3.7 46 17-78 139-185 (195)
245 3ed3_A Protein disulfide-isome 86.3 0.8 2.7E-05 33.7 4.2 24 17-40 79-102 (298)
246 3apo_A DNAJ homolog subfamily 86.3 0.51 1.7E-05 38.7 3.4 55 15-79 715-769 (780)
247 2dbc_A PDCL2, unnamed protein 85.9 1.6 5.3E-05 28.0 5.0 46 23-75 74-119 (135)
248 1a0r_P Phosducin, MEKA, PP33; 85.9 0.33 1.1E-05 35.5 1.9 32 19-53 175-206 (245)
249 2hls_A Protein disulfide oxido 85.9 1.6 5.4E-05 31.0 5.5 52 9-77 65-117 (243)
250 2c0g_A ERP29 homolog, windbeut 85.1 2.3 7.7E-05 31.0 6.1 46 18-77 82-132 (248)
251 2qc7_A ERP31, ERP28, endoplasm 84.7 2.4 8.2E-05 30.7 6.1 46 18-76 70-118 (240)
252 2fgx_A Putative thioredoxin; N 82.2 1.5 5.1E-05 28.2 3.6 40 8-53 58-98 (107)
253 3l9v_A Putative thiol-disulfid 82.1 2.7 9.3E-05 28.5 5.2 52 17-79 133-185 (189)
254 2trc_P Phosducin, MEKA, PP33; 82.0 0.93 3.2E-05 32.1 2.8 33 18-53 161-193 (217)
255 3ga4_A Dolichyl-diphosphooligo 81.8 0.99 3.4E-05 31.6 2.9 29 13-41 87-115 (178)
256 3l9s_A Thiol:disulfide interch 80.9 3.8 0.00013 28.0 5.7 52 17-78 139-190 (191)
257 1r4w_A Glutathione S-transfera 80.1 2.2 7.4E-05 29.8 4.2 47 18-79 171-217 (226)
258 2imf_A HCCA isomerase, 2-hydro 79.2 4 0.00014 27.7 5.3 42 18-78 156-197 (203)
259 3rpp_A Glutathione S-transfera 77.7 2.6 9E-05 29.8 4.1 48 17-79 170-217 (234)
260 3uem_A Protein disulfide-isome 72.0 1.3 4.5E-05 32.5 1.3 38 13-52 305-343 (361)
261 2d1s_A Luciferase, luciferin 4 67.0 7.3 0.00025 30.4 4.6 52 19-74 408-462 (548)
262 1hyu_A AHPF, alkyl hydroperoxi 66.9 9 0.00031 30.0 5.1 38 8-52 148-186 (521)
263 2e7p_A Glutaredoxin; thioredox 65.3 2.5 8.5E-05 25.7 1.3 20 19-41 63-82 (116)
264 3gn3_A Putative protein-disulf 62.8 4.5 0.00015 27.7 2.4 17 19-35 144-160 (182)
265 1ry2_A Acetyl-coenzyme A synth 62.4 11 0.00039 30.3 5.0 52 19-74 491-547 (663)
266 3kp9_A Vkorc1/thioredoxin doma 62.3 5.9 0.0002 29.6 3.2 27 18-52 240-266 (291)
267 4gr5_A Non-ribosomal peptide s 62.2 3.3 0.00011 32.4 1.8 53 18-74 427-490 (570)
268 3l8c_A D-alanine--poly(phospho 61.0 6.6 0.00023 30.1 3.3 52 19-74 367-424 (521)
269 1mdb_A 2,3-dihydroxybenzoate-A 59.8 7.6 0.00026 30.1 3.5 51 19-73 397-450 (539)
270 3ihg_A RDME; flavoenzyme, anth 59.4 13 0.00044 28.9 4.7 52 14-77 483-534 (535)
271 3o83_A Peptide arylation enzym 59.4 5.8 0.0002 30.9 2.7 52 19-74 406-460 (544)
272 3ni2_A 4-coumarate:COA ligase; 58.6 6.4 0.00022 30.5 2.9 52 19-74 401-455 (536)
273 4f9z_D Endoplasmic reticulum r 57.9 40 0.0014 23.0 6.7 58 9-79 164-227 (227)
274 4h86_A Peroxiredoxin type-2; o 56.6 21 0.00073 25.4 5.1 38 9-51 133-179 (199)
275 1ego_A Glutaredoxin; electron 56.5 7.8 0.00027 21.9 2.4 17 19-35 46-64 (85)
276 4dg8_A PA1221; ANL superfamily 55.2 4.3 0.00015 32.6 1.4 43 28-74 398-440 (620)
277 3fz5_A Possible 2-hydroxychrom 54.5 24 0.00082 23.9 5.0 27 17-51 161-187 (202)
278 3rg2_A Enterobactin synthase c 53.8 5.5 0.00019 31.6 1.8 52 19-74 401-455 (617)
279 1un2_A DSBA, thiol-disulfide i 53.2 22 0.00076 24.4 4.7 20 16-35 37-56 (197)
280 2b5e_A Protein disulfide-isome 52.7 10 0.00036 29.1 3.2 41 24-76 426-466 (504)
281 3ite_A SIDN siderophore synthe 52.3 7.6 0.00026 30.1 2.3 44 28-75 406-449 (562)
282 3rix_A Luciferase, luciferin 4 51.7 8.5 0.00029 29.9 2.5 52 19-74 406-460 (550)
283 4gs5_A Acyl-COA synthetase (AM 51.4 4.7 0.00016 29.9 1.0 49 28-81 230-278 (358)
284 4fuq_A Malonyl COA synthetase; 51.1 8.9 0.0003 29.5 2.6 52 19-74 366-420 (503)
285 3g7s_A Long-chain-fatty-acid-- 51.1 8.6 0.00029 29.8 2.5 43 28-74 418-460 (549)
286 3ipl_A 2-succinylbenzoate--COA 50.4 10 0.00034 28.9 2.7 43 28-74 377-419 (501)
287 2v7b_A Benzoate-coenzyme A lig 49.3 13 0.00043 28.6 3.2 51 19-73 397-449 (529)
288 2ec4_A FAS-associated factor 1 48.9 28 0.00095 23.8 4.6 34 20-53 118-155 (178)
289 1pg4_A Acetyl-COA synthetase; 48.7 9.5 0.00033 30.6 2.4 45 26-74 494-538 (652)
290 3eeq_A Putative cobalamin bios 48.3 29 0.00099 26.4 5.0 74 4-89 50-128 (336)
291 2ia7_A Tail lysozyme, putative 47.3 19 0.00065 23.3 3.4 31 64-94 30-60 (134)
292 3tsy_A Fusion protein 4-coumar 46.7 14 0.00047 31.0 3.2 52 19-74 448-502 (979)
293 2w4l_A DCMP deaminse, deoxycyt 45.0 20 0.00067 24.8 3.3 33 64-100 13-45 (178)
294 1t5h_X 4-chlorobenzoyl COA lig 43.9 8 0.00027 29.6 1.3 51 19-73 370-422 (504)
295 3c5e_A Acyl-coenzyme A synthet 40.8 12 0.0004 29.5 1.8 52 19-74 424-477 (570)
296 1pn0_A Phenol 2-monooxygenase; 39.5 72 0.0025 25.8 6.4 47 18-78 600-647 (665)
297 3etc_A AMP-binding protein; ad 39.4 17 0.00057 28.7 2.5 52 19-74 443-496 (580)
298 3bj5_A Protein disulfide-isome 38.3 80 0.0027 20.4 6.4 59 9-80 65-130 (147)
299 3msz_A Glutaredoxin 1; alpha-b 37.7 37 0.0013 19.0 3.3 17 19-35 46-67 (89)
300 3r44_A Fatty acyl COA syntheta 37.6 15 0.00052 28.2 2.0 51 19-73 381-433 (517)
301 1r7h_A NRDH-redoxin; thioredox 36.1 52 0.0018 17.6 4.3 28 8-35 25-56 (75)
302 2h8l_A Protein disulfide-isome 33.8 84 0.0029 21.7 5.3 50 19-80 180-233 (252)
303 3nyq_A Malonyl-COA ligase; A/B 32.9 20 0.00069 27.5 2.0 52 19-74 372-427 (505)
304 1i9w_A Fusion protein E1; enve 32.5 26 0.00089 27.4 2.5 25 71-95 239-263 (390)
305 3ivr_A Putative long-chain-fat 32.3 24 0.00083 26.8 2.3 52 19-74 366-421 (509)
306 3j0f_E E1 envelope glycoprotei 32.0 27 0.00091 27.8 2.5 25 71-95 239-263 (439)
307 1v25_A Long-chain-fatty-acid-C 31.7 11 0.00037 29.3 0.2 51 20-74 403-456 (541)
308 2lqo_A Putative glutaredoxin R 31.3 88 0.003 18.8 4.5 52 7-77 27-84 (92)
309 1amu_A GRSA, gramicidin synthe 31.1 18 0.0006 28.4 1.4 43 28-74 409-451 (563)
310 1vq2_A DCMP deaminase, deoxycy 30.0 38 0.0013 23.3 2.8 31 65-100 4-34 (193)
311 2ljk_A Protein C17ORF37; MIEN1 29.4 20 0.00069 23.5 1.2 50 44-93 67-116 (117)
312 3kxw_A Saframycin MX1 syntheta 29.2 15 0.00051 28.5 0.6 49 19-72 418-477 (590)
313 2hze_A Glutaredoxin-1; thiored 27.5 40 0.0014 20.5 2.4 16 20-35 66-81 (114)
314 2yew_B E1 envelope glycoprotei 26.6 28 0.00095 27.6 1.7 25 71-95 234-258 (427)
315 3ic4_A Glutaredoxin (GRX-1); s 25.0 1E+02 0.0034 17.4 5.2 17 19-35 57-73 (92)
316 1za8_A VHL-1; circular protein 24.7 19 0.00064 18.5 0.3 11 85-95 12-22 (31)
317 1kte_A Thioltransferase; redox 24.6 50 0.0017 19.3 2.4 16 20-35 59-74 (105)
318 2a8n_A Cytidine and deoxycytid 24.4 27 0.00093 22.9 1.2 31 65-99 5-35 (144)
319 2dkh_A 3-hydroxybenzoate hydro 24.2 1.1E+02 0.0037 24.5 4.9 49 13-75 583-636 (639)
320 2l4c_A Endoplasmic reticulum r 23.5 1.4E+02 0.0049 18.7 6.2 38 8-50 67-104 (124)
321 2vsq_A Surfactin synthetase su 23.3 33 0.0011 29.9 1.7 43 28-74 840-882 (1304)
322 2b3j_A TRNA adenosine deaminas 22.6 31 0.001 23.2 1.2 31 65-99 8-38 (159)
323 2hvw_A Deoxycytidylate deamina 22.4 73 0.0025 22.1 3.1 31 64-99 42-72 (184)
324 2b3z_A Riboflavin biosynthesis 22.2 68 0.0023 24.3 3.2 35 64-100 14-48 (373)
325 3muu_A Structural polyprotein; 22.1 52 0.0018 27.9 2.6 25 71-95 599-623 (750)
326 3fce_A D-alanine--poly(phospho 22.0 48 0.0016 25.2 2.3 42 28-74 379-420 (512)
327 1sji_A Calsequestrin 2, calseq 21.9 1.2E+02 0.004 22.0 4.4 32 17-51 178-209 (350)
328 4ano_A ESSB; membrane protein, 21.8 1E+02 0.0036 22.0 3.9 26 28-55 109-134 (219)
329 3e7w_A D-alanine--poly(phospho 21.2 57 0.002 24.8 2.6 42 28-74 378-419 (511)
330 3gqw_A Fatty acid AMP ligase; 20.9 46 0.0016 25.5 2.0 44 26-74 439-482 (576)
331 1wwr_A TRNA adenosine deaminas 20.3 36 0.0012 23.3 1.2 32 64-99 23-54 (171)
332 3c1r_A Glutaredoxin-1; oxidize 20.2 66 0.0023 19.8 2.4 16 20-35 73-88 (118)
333 1z3a_A TRNA-specific adenosine 20.2 36 0.0012 23.2 1.1 32 65-100 10-41 (168)
334 1p6o_A Cytosine deaminase; hyd 20.1 37 0.0013 22.9 1.2 34 64-100 14-48 (161)
No 1
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.83 E-value=2.5e-20 Score=134.05 Aligned_cols=88 Identities=49% Similarity=0.893 Sum_probs=79.9
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSNQKP 87 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~~~t~ 87 (101)
+++||++.|.+++++++||+..+|++||||++| +++|+|.+|+.++......+..+|+++|+++|+|++++.++++
T Consensus 122 ~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G----~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~ 197 (218)
T 3u5r_E 122 GYGFPYLKDASQSVAKAYGAACTPDFFLYDRER----RLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGKDVGTTQVP 197 (218)
T ss_dssp TCCSCEEECTTCHHHHHHTCCEESEEEEECTTC----BEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTCCCCSCCCC
T ss_pred CCCccEEECCccHHHHHcCCCCCCeEEEECCCC----cEEEeccccccccccccccCHHHHHHHHHHHHcCCCCCcCCcC
Confidence 679999999999999999999999999999999 5889999998865545566789999999999999999999999
Q ss_pred CCcceeeeeCCC
Q 034203 88 SVGCSIKWHPQT 99 (101)
Q Consensus 88 ~~GC~I~~~~~~ 99 (101)
++||+|+|+++.
T Consensus 198 ~~GC~i~w~~~~ 209 (218)
T 3u5r_E 198 SIGCNIKWTAGN 209 (218)
T ss_dssp CEEEECCCCCC-
T ss_pred CCCeeEEeCCCC
Confidence 999999998653
No 2
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.76 E-value=3.4e-18 Score=118.74 Aligned_cols=88 Identities=49% Similarity=0.952 Sum_probs=76.7
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSNQKP 87 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~~~t~ 87 (101)
+++||++.|.+++++++||+..+|++||||++| +++|+|.+++.........+...|+++|+++|++++++.++++
T Consensus 109 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~~~~~~~~~~ 184 (196)
T 2ywi_A 109 GYPFPYLYDETQEVAKAYDAACTPDFYIFDRDL----KCVYRGQLDDSRPNNGIPVTGESIRAALDALLEGRPVPEKQKP 184 (196)
T ss_dssp TCCSCEEECSSCHHHHHHTCCEESEEEEEETTC----BEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHTCCCCSCCCC
T ss_pred CCCceEEECCchHHHHHhCCCCCCeEEEEcCCC----eEEEccccCcccccccCccCHHHHHHHHHHHHcCCCCCCCCCC
Confidence 578999999999999999999999999999999 5899998877543112234678999999999999999999999
Q ss_pred CCcceeeeeCCC
Q 034203 88 SVGCSIKWHPQT 99 (101)
Q Consensus 88 ~~GC~I~~~~~~ 99 (101)
++||+|+|+++.
T Consensus 185 ~~gC~~~~~~~~ 196 (196)
T 2ywi_A 185 SIGCSIKWKPSA 196 (196)
T ss_dssp CEEEECCCCCCC
T ss_pred CCceeeeeccCC
Confidence 999999998763
No 3
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.74 E-value=5.5e-18 Score=117.47 Aligned_cols=87 Identities=34% Similarity=0.651 Sum_probs=75.2
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSNQKP 87 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~~~t~ 87 (101)
+++||++.|.+++++++||+..+|++||||++| +++|+|.+++.... ....+...|+++|+++|++++++.++++
T Consensus 95 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G----~i~~~g~~~~~~~~-~g~~~~~~l~~~i~~ll~~~~~~~~~~~ 169 (188)
T 2cvb_A 95 GIFFPYLLDETQEVAKAYRALRTPEVFLFDERR----LLRYHGRVNDNPKD-PSKVQSHDLEAAIEALLRGEEPPLKEAP 169 (188)
T ss_dssp TCCSCEEECSSSHHHHHTTCCEESEEEEECTTC----BEEEEECSSSCTTC-GGGCCCCHHHHHHHHHHTTCCCCSSCCC
T ss_pred CCCceEEECCcchHHHHcCCCCCCeEEEECCCC----cEEEEEecCCcccc-ccccCHHHHHHHHHHHHcCCCCCcccCC
Confidence 578999999999999999999999999999999 58888998765321 1223456899999999999999999999
Q ss_pred CCcceeeeeCCC
Q 034203 88 SVGCSIKWHPQT 99 (101)
Q Consensus 88 ~~GC~I~~~~~~ 99 (101)
++||+|+|.+|.
T Consensus 170 ~~gc~~~~~~~~ 181 (188)
T 2cvb_A 170 AIGCTIKWRPGN 181 (188)
T ss_dssp CCSEECCCCTTC
T ss_pred CCceEEEecCCC
Confidence 999999998764
No 4
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.36 E-value=1.1e-12 Score=91.95 Aligned_cols=78 Identities=15% Similarity=0.226 Sum_probs=62.8
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
+++||++.|.+++++++||+. .+|++||||++|+ |+.++.|.....+ ....+.++|++|..
T Consensus 90 ~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~--i~~~~~~~~~~~~-------~~~~l~~~l~~l~~---- 156 (186)
T 1n8j_A 90 KIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGI--IQAIEVTAEGIGR-------DASDLLRKIKAAQY---- 156 (186)
T ss_dssp GCCSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTBCC-------CHHHHHHHHHHHHH----
T ss_pred CCceeEEECCchHHHHHhCCccCCCCceeeEEEEECCCCe--EEEEEecCCCCCC-------CHHHHHHHHHHHHH----
Confidence 689999999999999999997 4899999999996 6666667543221 35788999999876
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
..++|+.||+++|++|.
T Consensus 157 -~~~~p~~~~p~~w~~~~ 173 (186)
T 1n8j_A 157 -VAAHPGEVCPAKWKEGE 173 (186)
T ss_dssp -HHHSTTCBBCTTCCTTS
T ss_pred -HhhcCCCccCCCCCCCC
Confidence 33466999999998774
No 5
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.35 E-value=2.4e-12 Score=92.79 Aligned_cols=77 Identities=9% Similarity=0.198 Sum_probs=52.0
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|.++.. .+..++.++|++|+..
T Consensus 119 ~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~~G~--I~~~~~g~~~~~-------~~~~ell~~l~~l~~~--- 186 (220)
T 1zye_A 119 HMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDPNGV--IKHLSVNDLPVG-------RSVEETLRLVKAFQFV--- 186 (220)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTCC-------CCHHHHHHHHHHHHHT---
T ss_pred CCceEEEECCcHHHHHHhCCeecCCCcccceEEEECCCCE--EEEEEecCCCCC-------CCHHHHHHHHHHhhhh---
Confidence 689999999999999999999 9999999999996 444455654322 2468899999999876
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
+....+|+++|++|.
T Consensus 187 ---~~~~~~cp~~W~~g~ 201 (220)
T 1zye_A 187 ---EAHGEVSPANWTPES 201 (220)
T ss_dssp ---TC-------------
T ss_pred ---cccCCccCCCCCCCC
Confidence 356899999998764
No 6
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.33 E-value=1.2e-12 Score=94.07 Aligned_cols=77 Identities=13% Similarity=0.221 Sum_probs=61.2
Q ss_pred ccceeEEEeChhHHHHHhCCc-----ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~-----~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|..... .+..++.++|++++..+
T Consensus 115 ~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~G~--i~~~~~~~~~~~-------~~~~ell~~l~~l~~~~--- 182 (213)
T 2i81_A 115 NIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGI--VQHLLVNNLAIG-------RSVDEILRIIDAIQHHE--- 182 (213)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSB--EEEEEEECTTCC-------CCHHHHHHHHHHHHHHH---
T ss_pred CCCceEEECCchHHHHHhCCccccCCcccEEEEECCCCE--EEEEEecCCCCC-------CCHHHHHHHHHHHHhhh---
Confidence 689999999999999999999 9999999999995 444444443211 24678999999988653
Q ss_pred CCCCCCCcceeeeeCCC
Q 034203 83 SNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 83 ~~~t~~~GC~I~~~~~~ 99 (101)
..+.||+++|++|.
T Consensus 183 ---~~~~~cp~~w~~g~ 196 (213)
T 2i81_A 183 ---KYGDVCPANWQKGK 196 (213)
T ss_dssp ---HHCCBCCTTCCTTS
T ss_pred ---hcCCCcCCCCCcCC
Confidence 35899999998774
No 7
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.29 E-value=2.5e-12 Score=92.27 Aligned_cols=77 Identities=12% Similarity=0.255 Sum_probs=61.5
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|.+...+ ....+.++|++|+..
T Consensus 111 ~~~fp~l~D~~~~~~~~ygv~~~~~g~~~p~~~lID~~G~--I~~~~~g~~~~~~-------~~~ell~~l~~l~~~--- 178 (211)
T 2pn8_A 111 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGI--LRQITLNDLPVGR-------SVDETLRLVQAFQYT--- 178 (211)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTBCC-------CHHHHHHHHHHHHHH---
T ss_pred CCceEEEECCchHHHHHcCCcccCCCcccceEEEECCCCE--EEEEEecCCCCCC-------CHHHHHHHHHHhhhc---
Confidence 689999999999999999995 7999999999996 5555556543221 357888999998865
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
+..++||+++|++|+
T Consensus 179 ---~~~~~~~p~~w~~g~ 193 (211)
T 2pn8_A 179 ---DKHGEVCPAGWKPGS 193 (211)
T ss_dssp ---HHHCCBBCTTCCTTS
T ss_pred ---ccCCcccCCCCCCCC
Confidence 445899999998774
No 8
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.29 E-value=2.9e-12 Score=89.90 Aligned_cols=77 Identities=12% Similarity=0.234 Sum_probs=62.7
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
+++||++.|.+++++++||+. .+|++||||++|+ |+.++.|.+...+ +...+.++|+++...
T Consensus 97 ~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~~G~--i~~~~~g~~~~~~-------~~~e~l~~l~~l~~~--- 164 (197)
T 1qmv_A 97 PLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDGKGV--LRQITVNDLPVGR-------SVDEALRLVQAFQYT--- 164 (197)
T ss_dssp SCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTBCC-------CHHHHHHHHHHHHHH---
T ss_pred CCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECCCCc--EEEEEeCCCCCCC-------CHHHHHHHHHhcchh---
Confidence 789999999999999999999 7999999999996 5666668754321 356788888887653
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
..++.||+++|++|+
T Consensus 165 ---~~~~~~cp~~w~~g~ 179 (197)
T 1qmv_A 165 ---DEHGEVCPAGWKPGS 179 (197)
T ss_dssp ---HHHCCBBCTTCCTTS
T ss_pred ---hccCCccCCCcCcCC
Confidence 357899999998875
No 9
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.27 E-value=9.9e-13 Score=94.78 Aligned_cols=77 Identities=13% Similarity=0.273 Sum_probs=57.5
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|...... ....+.++|+++ +.+
T Consensus 132 ~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~~G~--I~~~~~g~~~~~~-------~~~~il~~l~~l---~~~ 199 (222)
T 3ztl_A 132 HMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDPNGI--LRQITINDKPVGR-------SVDETLRLLDAF---QFV 199 (222)
T ss_dssp SCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECTTSE--EEEEEEECTTBCC-------CHHHHHHHHHHH---HHH
T ss_pred ccceeEEeCCchHHHHHcCCeecCCCCccceEEEECCCCe--EEEEEecCCCCCC-------CHHHHHHHHHHh---hcc
Confidence 789999999999999999998 8999999999996 5555666643211 133444444443 333
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
.++++||+|+|++++
T Consensus 200 ---~~~~~~c~~~w~~~~ 214 (222)
T 3ztl_A 200 ---EKHGEVCPVNWKRGQ 214 (222)
T ss_dssp ---HHHSCBBCTTCCTTS
T ss_pred ---cccCccCCcCcCCCC
Confidence 567999999998874
No 10
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.24 E-value=7.1e-12 Score=87.43 Aligned_cols=77 Identities=17% Similarity=0.231 Sum_probs=60.5
Q ss_pred ccceeEEEeChhHHHHHhCCc-----ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~-----~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|..... .+...+.++|+++...
T Consensus 94 ~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~G~--i~~~~~g~~~~~-------~~~~~l~~~l~~l~~~---- 160 (192)
T 2h01_A 94 NIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQGV--VQHLLVNNLALG-------RSVDEILRLIDALQHH---- 160 (192)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTTSB--EEEEEEGGGSSG-------GGHHHHHHHHHHHHHH----
T ss_pred CCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCCCE--EEEEEeCCCCCC-------CCHHHHHHHHHHHhhh----
Confidence 689999999999999999999 9999999999996 444455543211 2467899999998864
Q ss_pred CCCCCCCcceeeeeCCC
Q 034203 83 SNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 83 ~~~t~~~GC~I~~~~~~ 99 (101)
+....||+++|++|.
T Consensus 161 --~~~~~~cp~~w~~~~ 175 (192)
T 2h01_A 161 --EKYGDVCPANWQKGK 175 (192)
T ss_dssp --HHHCCCCCSSCCCC-
T ss_pred --hhcCCCccCCCCCCC
Confidence 334899999998764
No 11
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.22 E-value=1.4e-11 Score=89.38 Aligned_cols=77 Identities=10% Similarity=0.267 Sum_probs=55.4
Q ss_pred ccceeEEEeChhHHHHHhCC-----cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGA-----ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga-----~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
+++||++.|.+++++++||+ ..+|++||||++|+ |+.++.|..... .+...+.++|++|+..
T Consensus 119 ~~~fp~l~D~~~~~~~~ygv~~~~g~~~P~~~lID~~G~--I~~~~~g~~~~~-------~~~~ell~~l~~L~~~---- 185 (221)
T 2c0d_A 119 NVEFTLVSDINKDISKNYNVLYDNSFALRGLFIIDKNGC--VRHQTVNDLPIG-------RNVQEVLRTIDSIIHV---- 185 (221)
T ss_dssp SCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTTSB--EEEEEEECTTCC-------CCHHHHHHHHHHHHHH----
T ss_pred CCceEEEECCchHHHHHcCCcccCCCccceEEEECCCCe--EEEEEecCCCCC-------CCHHHHHHHHHHHhhh----
Confidence 67999999999999999999 47999999999996 555555654321 1467899999998764
Q ss_pred CCCCCCCcceeeeeCCC
Q 034203 83 SNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 83 ~~~t~~~GC~I~~~~~~ 99 (101)
+...+||+++|+++.
T Consensus 186 --~~~~~~cp~~W~~g~ 200 (221)
T 2c0d_A 186 --DTSGEVCPINWKKGQ 200 (221)
T ss_dssp --HHHCCSCC-------
T ss_pred --hcCCCcCCCCCCCCC
Confidence 234799999997764
No 12
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.21 E-value=1.3e-11 Score=86.93 Aligned_cols=77 Identities=9% Similarity=0.172 Sum_probs=62.7
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|..... .+..++.++|++++..
T Consensus 99 ~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~~G~--i~~~~~g~~~~~-------~~~~ell~~l~~l~~~--- 166 (202)
T 1uul_A 99 QMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDPKQN--LRQITVNDLPVG-------RDVDEALRLVKAFQFV--- 166 (202)
T ss_dssp SCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECTTSB--EEEEEEECTTBC-------CCHHHHHHHHHHHHHH---
T ss_pred CCceeEEECCchHHHHHcCCccCCCCceeeEEEEECCCCE--EEEEEeCCCCCC-------CCHHHHHHHHHHhhhh---
Confidence 789999999999999999999 9999999999996 555555654322 1467899999999864
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
+....+|+++|++|.
T Consensus 167 ---~~~~~~~p~~w~~g~ 181 (202)
T 1uul_A 167 ---EKHGEVCPANWKPGD 181 (202)
T ss_dssp ---HHHSCBBCTTCCTTS
T ss_pred ---hhcCCccCCCcCCCC
Confidence 245789999998764
No 13
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.18 E-value=3.5e-11 Score=83.39 Aligned_cols=78 Identities=17% Similarity=0.264 Sum_probs=56.9
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|.....+ +...+.++|+++++.+
T Consensus 91 ~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~--i~~~~~g~~~~~~-------~~~~l~~~l~~l~~~~-- 159 (187)
T 1we0_A 91 SIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGV--IQAIEINADGIGR-------DASTLINKVKAAQYVR-- 159 (187)
T ss_dssp TCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTSCC-------CTTHHHHHHHHHHHHH--
T ss_pred CCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCe--EEEEEecCCCCCC-------CHHHHHHHHHHHhhhh--
Confidence 689999999999999999999 9999999999997 6666777643211 2468899999998753
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
.++..+|+++|.+|.
T Consensus 160 ---~~~~~~~p~~w~~~~ 174 (187)
T 1we0_A 160 ---ENPGEVCPAKWEEGG 174 (187)
T ss_dssp ---TSTTCCC--------
T ss_pred ---hCCCcccccccccCC
Confidence 466889999998764
No 14
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.16 E-value=2.5e-11 Score=89.03 Aligned_cols=77 Identities=10% Similarity=0.235 Sum_probs=55.9
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|..... .....+.++|+++-.-.
T Consensus 140 ~~~fp~l~D~~~~v~~~ygv~~~~~g~~~p~~flID~~G~--I~~~~~~~~~~~-------~~~~eil~~l~~lq~~~-- 208 (240)
T 3qpm_A 140 PMKIPLLSDLTHQISKDYGVYLEDQGHTLRGLFIIDEKGV--LRQITMNDLPVG-------RSVDETLRLVQAFQYTD-- 208 (240)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTBC-------CCHHHHHHHHHHHHHHH--
T ss_pred CCceeEEeCchHHHHHHhCCccccCCCccceEEEEcCCCe--EEEEEecCCCCC-------CCHHHHHHHHHHhhhhh--
Confidence 689999999999999999998 7999999999995 444444543321 12456666666653211
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
....||+++|++|.
T Consensus 209 ----~~~~~cp~~W~~g~ 222 (240)
T 3qpm_A 209 ----KHGEVCPAGWKPGS 222 (240)
T ss_dssp ----HHSCBBCTTCCTTS
T ss_pred ----hcCCccCCCCCCCC
Confidence 12799999998874
No 15
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.13 E-value=4.6e-11 Score=88.73 Aligned_cols=77 Identities=8% Similarity=0.163 Sum_probs=46.2
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|..... .....+.++|+++-....
T Consensus 154 ~~~fp~l~D~~~~va~~ygv~~~~~g~~~p~tflID~~G~--I~~~~~~~~~~~-------~~~~eil~~L~alq~~~~- 223 (254)
T 3tjj_A 154 PIRIPLLSDLTHQISKDYGVYLEDSGHTLRGLFIIDDKGI--LRQITLNDLPVG-------RSVDETLRLVQAFQYTDK- 223 (254)
T ss_dssp SCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSB--EEEEEEECTTCC-------CCHHHHHHHHHHHHHHHH-
T ss_pred ccccceeeCcHHHHHHHcCCccccCCCccceEEEECCCCe--EEEEEecCCCCC-------CCHHHHHHHHHhhccccc-
Confidence 689999999999999999996 6899999999996 444444543221 124566666666543211
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
...||+++|++|+
T Consensus 224 -----~~~~cp~~W~~g~ 236 (254)
T 3tjj_A 224 -----HGEVAPAGWKPGS 236 (254)
T ss_dssp -----HC-----------
T ss_pred -----cCccccCCCCCCC
Confidence 2689999998874
No 16
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.08 E-value=3.8e-10 Score=78.89 Aligned_cols=73 Identities=11% Similarity=0.162 Sum_probs=51.6
Q ss_pred ccceeEEEeChhHHHHHhCCc-----ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~-----~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|..... .+...+.++|+++++
T Consensus 105 ~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~--i~~~~~g~~~~~-------~~~~~l~~~l~~l~~----- 170 (195)
T 2bmx_A 105 TLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNE--IQFVSATAGSVG-------RNVDEVLRVLDALQS----- 170 (195)
T ss_dssp GCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSB--EEEEEEECTTCC-------CCHHHHHHHHHHHHC-----
T ss_pred CCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCe--EEEEEecCCCCC-------CCHHHHHHHHHHHhh-----
Confidence 789999999999999999999 9999999999997 666667765322 136889999999987
Q ss_pred CCCCCCCcceeeeeCCC
Q 034203 83 SNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 83 ~~~t~~~GC~I~~~~~~ 99 (101)
..+|+.+|+++.
T Consensus 171 -----~~~~p~~w~~~~ 182 (195)
T 2bmx_A 171 -----DELCASNWRKGD 182 (195)
T ss_dssp -----------------
T ss_pred -----CCCcCcccccCC
Confidence 348999997764
No 17
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.05 E-value=1.9e-10 Score=84.56 Aligned_cols=77 Identities=16% Similarity=0.249 Sum_probs=61.4
Q ss_pred ccceeEEEeChhHHHHHhCCc------------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 8 FLMWLITLFQSQDVARDFGAA------------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+..+.|.....+ +..++.++|++|
T Consensus 93 ~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~--I~~~~~~~~~~gr-------~~~eilr~l~~L 163 (233)
T 2v2g_A 93 DMPYPIIADETRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKK--LKLSILYPATTGR-------NFSEILRVIDSL 163 (233)
T ss_dssp SCSSCEEECTTCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSB--EEEEEEECTTBCC-------CHHHHHHHHHHH
T ss_pred CCceEEEECChHHHHHHhCCcCcccccCCCcccccceEEEECCCCE--EEEEEecCCCCCC-------CHHHHHHHHHHH
Confidence 689999999999999999985 6899999999996 6666666543221 367899999998
Q ss_pred HcCCCCCCCCCCCCcceeeeeCCC
Q 034203 76 LSGQPVSSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 76 Lag~~v~~~~t~~~GC~I~~~~~~ 99 (101)
.... ...++|+++|++|.
T Consensus 164 q~~~------~~~~~~p~~W~~g~ 181 (233)
T 2v2g_A 164 QLTA------QKKVATPADWQPGD 181 (233)
T ss_dssp HHHH------HSSEEBCTTCCTTS
T ss_pred Hhhc------cCCccCCCCcCcCC
Confidence 7753 24789999998874
No 18
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.03 E-value=8.6e-10 Score=73.37 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=52.7
Q ss_pred cccceeEEEeChh-----HHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 7 LFLMWLITLFQSQ-----DVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 7 ~~l~fpvl~D~~~-----~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.+++||++.|.++ ++++.||+..+|++||||++|+ ++.++.|.++ ...+++.|+++|+.+.+
T Consensus 90 ~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~i~~ll~~~~~ 156 (158)
T 3eyt_A 90 YRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGD--LRAHHFGDVS-----------ELLLGAEIATLLGEAAP 156 (158)
T ss_dssp TTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSE--EEEEEESCCC-----------HHHHHHHHHHHHTSCCC
T ss_pred cCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCC--EEEEEeCCCC-----------HHHHHHHHHHHhccCCC
Confidence 3678999999998 7999999999999999999996 5556677643 56899999999987654
No 19
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.01 E-value=9.9e-10 Score=73.04 Aligned_cols=61 Identities=20% Similarity=0.331 Sum_probs=52.2
Q ss_pred cccceeEEEeChhH------HHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 7 LFLMWLITLFQSQD------VARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 7 ~~l~fpvl~D~~~~------vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
.+++||++.|..+. ++++||+..+|++||||++|+ ++.+|.|.++ ...+++.|+.+|+.++
T Consensus 92 ~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~i~~ll~~~~ 158 (160)
T 3lor_A 92 FGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGR--IRQVQFGQVD-----------DFVLGLLLGSLLSETD 158 (160)
T ss_dssp TTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSB--EEEEEESCCC-----------HHHHHHHHHHHHTCC-
T ss_pred cCCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCc--EEEEecCcCC-----------HHHHHHHHHHHHhccC
Confidence 36789999999998 999999999999999999996 5666778753 5689999999998764
No 20
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.00 E-value=6.5e-10 Score=77.69 Aligned_cols=77 Identities=10% Similarity=0.194 Sum_probs=57.3
Q ss_pred cccceeEEEeChhHHHHHhCCc-----ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 7 LFLMWLITLFQSQDVARDFGAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~-----~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
..++||++.|.+++++++||+. .+|++||||++|+ |+.++.|..... .+...+.++|+++...+
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~--i~~~~~g~~~~~-------~~~~~l~~~l~~l~~~~-- 163 (198)
T 1zof_A 95 GQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDKNMK--VRHAVINDLPLG-------RNADEMLRMVDALLHFE-- 163 (198)
T ss_dssp CCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEETTTE--EEEEEEESSSCC-------CHHHHHHHHHHHHHHHH--
T ss_pred cCceeEEEECCchHHHHHhCCcccCCcccceEEEECCCCE--EEEEEecCCCCC-------CCHHHHHHHHHHHHHhh--
Confidence 5789999999999999999999 9999999999996 556666764422 14678999999988643
Q ss_pred CCCCCCCCcceeeeeCC
Q 034203 82 SSNQKPSVGCSIKWHPQ 98 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~ 98 (101)
....+|..+|.++
T Consensus 164 ----~~~~~~p~~w~~~ 176 (198)
T 1zof_A 164 ----EHGEVCPAGWRKG 176 (198)
T ss_dssp ----SSCCCCC------
T ss_pred ----ccCCccCCcCcCC
Confidence 2478899999655
No 21
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.96 E-value=5.4e-10 Score=83.22 Aligned_cols=74 Identities=16% Similarity=0.230 Sum_probs=59.1
Q ss_pred ccceeEEEeChhHHHHHhCCc-------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA-------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~-------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
.++||++.|.+++++++||+. .+|++||||++|+ |+.++.|.....+ +..++.++|++++....
T Consensus 95 ~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~dG~--I~~~~~~~~~~gr-------~~~Ellr~I~alq~~~~ 165 (249)
T 3a2v_A 95 RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGV--IRTMLYYPMELGR-------LVDEILRIVKALKLGDS 165 (249)
T ss_dssp CCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECTTSB--EEEEEEECTTBCC-------CHHHHHHHHHHHHHHHH
T ss_pred CCceeEEECCchHHHHHhCCccccCCCcccceEEEECCCCe--EEEEEecCCcccc-------hhHHHHHHHHHHHhccc
Confidence 789999999999999999997 8999999999996 5555555533211 36789999999887542
Q ss_pred CCCCCCCCCcceeeeeC
Q 034203 81 VSSNQKPSVGCSIKWHP 97 (101)
Q Consensus 81 v~~~~t~~~GC~I~~~~ 97 (101)
...+|+.+| +
T Consensus 166 ------~~~~~Pa~W-~ 175 (249)
T 3a2v_A 166 ------LKRAVPADW-P 175 (249)
T ss_dssp ------HTCBBCTTT-T
T ss_pred ------cCccCCCCC-C
Confidence 368899999 6
No 22
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.95 E-value=6.9e-10 Score=80.59 Aligned_cols=78 Identities=15% Similarity=0.160 Sum_probs=60.4
Q ss_pred cccceeEEEeChhHHHHHhCCc------------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 7 LFLMWLITLFQSQDVARDFGAA------------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~------------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
..++||++.|.+++++++||+. .+|++||||++|+ |+..+.|.....+ +..++.++|++
T Consensus 96 ~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~--I~~~~~~~~~~gr-------~~~eil~~i~~ 166 (224)
T 1prx_A 96 EKLPFPIIDDRNRELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKK--LKLSILYPATTGR-------NFDEILRVVIS 166 (224)
T ss_dssp SCCSSCEEECTTCHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSB--EEEEEECCTTBCC-------CHHHHHHHHHH
T ss_pred cCcCcceeecCchHHHHHhCCCCcccccCCCccccceEEEEECCCCE--EEEEEecCCCCCC-------CHHHHHHHHHH
Confidence 4789999999999999999974 4799999999996 5666666533221 36789999999
Q ss_pred HHcCCCCCCCCCCCCcceeeeeCCC
Q 034203 75 VLSGQPVSSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 75 lLag~~v~~~~t~~~GC~I~~~~~~ 99 (101)
|+.... ..+.|+++|++|.
T Consensus 167 l~~~~~------~~~~~p~~W~~g~ 185 (224)
T 1prx_A 167 LQLTAE------KRVATPVDWKDGD 185 (224)
T ss_dssp HHHHHH------HCEEBCTTCCTTS
T ss_pred HHhhcc------CCcCCCCCCCCCC
Confidence 887532 3588999998774
No 23
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=98.93 E-value=1e-09 Score=79.50 Aligned_cols=78 Identities=10% Similarity=0.134 Sum_probs=60.5
Q ss_pred cccceeEEEeChhHHHHHhCCc------------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 7 LFLMWLITLFQSQDVARDFGAA------------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~------------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
..++||++.|.+++++++||+. .+|++||||++|+ |+.++.|.....+ +..++.++|++
T Consensus 93 ~~~~fpil~D~~~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~--I~~~~~~~~~~g~-------~~~ell~~i~~ 163 (220)
T 1xcc_A 93 NKWEIPIVCDESRELANKLKIMDEQEKDITGLPLTCRCLFFISPEKK--IKATVLYPATTGR-------NAHEILRVLKS 163 (220)
T ss_dssp SCCCCCEEECTTSHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSB--EEEEEEECTTBCC-------CHHHHHHHHHH
T ss_pred CCCcceeEECchhHHHHHhCCCCcccccCCCCCcccceEEEECCCCE--EEEEEecCCCCCC-------CHHHHHHHHHH
Confidence 4789999999999999999984 5799999999997 6666666543221 36789999999
Q ss_pred HHcCCCCCCCCCCCCcceeeeeCCC
Q 034203 75 VLSGQPVSSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 75 lLag~~v~~~~t~~~GC~I~~~~~~ 99 (101)
|..... ..+.|.+.|++|.
T Consensus 164 lq~~~~------~~~~~p~~w~~g~ 182 (220)
T 1xcc_A 164 LQLTYT------TPVATPVNWNEGD 182 (220)
T ss_dssp HHHHHH------SSEEBCTTCCTTS
T ss_pred HHhhhc------CCcccCCCcCcCC
Confidence 876442 2678888897764
No 24
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=98.93 E-value=2.6e-09 Score=70.64 Aligned_cols=63 Identities=16% Similarity=0.237 Sum_probs=50.8
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~ 83 (101)
+++||++.|.+++++++||+..+|++||||++|+ ++.+|.|..+ ...+++.|++++++...+.
T Consensus 82 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~G~~~-----------~~~l~~~l~~ll~~~~~~~ 144 (151)
T 2f9s_A 82 GVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGK--VVKVVTGTMT-----------ESMIHDYMNLIKPGETSGL 144 (151)
T ss_dssp TCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSE--EEEEEESCCC-----------HHHHHHHHHHHSCC-----
T ss_pred CCCceEEECCchHHHHhcCCCCCCeEEEECCCCc--EEEEEeCCCC-----------HHHHHHHHHHHHhhhhccc
Confidence 5789999999999999999999999999999996 5555667642 5799999999999876543
No 25
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=98.90 E-value=5.6e-09 Score=68.88 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=54.6
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~ 83 (101)
+++||++.|.+.++++.||+..+|++||||++|+ ++.+|.|..+ ...+.+.|+++|+++..+-
T Consensus 85 ~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~l~~ll~~~~~~~ 147 (153)
T 2l5o_A 85 GLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGE--ILKTYVGEPD-----------FGKLYQEIDTAWRNSDAEG 147 (153)
T ss_dssp TCCSEEEECSSCHHHHHHTCCSSSEEEEECSSSC--CCEEEESSCC-----------HHHHHHHHHHHHHCCSSCC
T ss_pred CCCceEEcCchHHHHHHcCCCccCeEEEECCCCc--EEEEEcCCCC-----------HHHHHHHHHHHHHhhhhcc
Confidence 5778999999999999999999999999999997 6667888643 5789999999999876553
No 26
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.89 E-value=5e-09 Score=71.35 Aligned_cols=61 Identities=18% Similarity=0.274 Sum_probs=44.8
Q ss_pred cccceeEEEeChhHHHHHhCCc-----------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 7 LFLMWLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~-----------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
.+++||++.|.+++++++||+. ..|++||||++|+ ++|+..-++. . ......++.++|++|
T Consensus 85 ~~~~~p~l~D~~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~----I~~~~~~~~~-~---~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 85 NKLNFTILSDYNREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGK----VRYKWVSDDP-T---KEPPYDEIEKVVKSL 156 (157)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSB----EEEEEEESST-T---CCCCHHHHHHHHHHT
T ss_pred cCCcEEEEEcCCcHHHHHcCCccccccCCCcceeeeeEEEECCCCE----EEEEEECCCC-C---CCCCHHHHHHHHHHh
Confidence 3689999999999999999985 4789999999995 5555432221 1 112456788888765
No 27
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=98.89 E-value=5.7e-09 Score=67.83 Aligned_cols=59 Identities=15% Similarity=0.269 Sum_probs=49.9
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
+++||++.|.++++++.||+..+|++||||++|+ ++.++.|..+ ...+++.|+++|+..
T Consensus 89 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~l~~~l~~~ 147 (148)
T 2b5x_A 89 DITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQ--LRHFQAGGSG-----------MKMLEKRVNRVLAET 147 (148)
T ss_dssp TCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCB--EEEEEESCST-----------THHHHHHHHHHHTTC
T ss_pred CCCcceEECCchhHHHHhCCCCCCEEEEECCCCc--EEEEecCCCC-----------HHHHHHHHHHHHhcc
Confidence 5789999999999999999999999999999996 4555666532 468999999999864
No 28
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=98.85 E-value=9.1e-09 Score=67.76 Aligned_cols=66 Identities=17% Similarity=0.232 Sum_probs=51.0
Q ss_pred cccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034203 7 LFLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~ 83 (101)
..++||++.|.++++++.||+..+|++||||++|+ ++.++.|.... +...|++.|++++.+.+-+.
T Consensus 83 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~~---------~~~~l~~~i~~~~~~~~~~~ 148 (152)
T 3gl3_A 83 VPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGK--VLLQHVGFRPA---------DKEALEQQILAALGGNEGHH 148 (152)
T ss_dssp SCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSB--EEEEEESCCTT---------THHHHHHHHHHHTC------
T ss_pred cCCCCceeECCcchhHHHcCCCCCCeEEEECCCCC--EEEEEccCCCc---------CHHHHHHHHHHHHccccccc
Confidence 35789999999999999999999999999999996 55566665332 36799999999998875443
No 29
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.80 E-value=7.7e-09 Score=68.25 Aligned_cols=65 Identities=15% Similarity=0.178 Sum_probs=48.9
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~ 83 (101)
+++||++.|.++.+++.||+..+|++||||++|+ ++.++.|..+. +...+.+.|+++....+.+.
T Consensus 85 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~~---------~~~~l~~~l~~l~~~~~~~~ 149 (154)
T 3kcm_A 85 GFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGV--ILKKVVGAMEW---------DHPEVIAFLNNELSKAREGH 149 (154)
T ss_dssp CCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSB--EEEEEESCCCT---------TSHHHHHHHHTC--------
T ss_pred CCCeeEEecCchHHHHHhCCCCCCeEEEECCCCc--EEEEEcCCCcc---------ccHHHHHHHHHHHHHhhhcc
Confidence 6789999999999999999999999999999996 55567777532 24689999999888876553
No 30
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.78 E-value=1.6e-08 Score=64.97 Aligned_cols=56 Identities=11% Similarity=0.184 Sum_probs=46.4
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEe---ecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYH---GQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~---G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+++||++.|.+++++++||+..+|++||+|++|+ ++ +|. |.. +...+++.|+++|+
T Consensus 78 ~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~--i~-~~~~~~g~~-----------~~~~l~~~l~~ll~ 136 (136)
T 1lu4_A 78 NLNFTNLNDADGVIWARYNVPWQPAFVFYRADGT--ST-FVNNPTAAM-----------SQDELSGRVAALTS 136 (136)
T ss_dssp TCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSC--EE-EECCSSSCC-----------CHHHHHHHHHHC--
T ss_pred CCCceEEECCchhHHHhcCCCCCCEEEEECCCCc--EE-EEEcCCCcc-----------CHHHHHHHHHHHhC
Confidence 5789999999999999999999999999999997 44 676 553 35789999888763
No 31
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=98.75 E-value=2.7e-08 Score=63.57 Aligned_cols=56 Identities=14% Similarity=0.271 Sum_probs=47.8
Q ss_pred cc-ceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 8 FL-MWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 8 ~l-~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
++ +||++.|.++.+++.||+..+|++||||++|+ ++ +|.|..+ ...+.+.|+++|+
T Consensus 79 ~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~--i~-~~~g~~~-----------~~~l~~~l~~~l~ 135 (136)
T 1zzo_A 79 PVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGN--VD-VVRGRMS-----------QDELTRRVTALTS 135 (136)
T ss_dssp TCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCC--EE-EEESCCC-----------HHHHHHHHHHHC-
T ss_pred CCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCC--EE-EEecCCC-----------HHHHHHHHHHHhc
Confidence 45 89999999999999999999999999999997 44 7888743 5688999988875
No 32
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.73 E-value=2.5e-08 Score=66.88 Aligned_cols=56 Identities=14% Similarity=0.310 Sum_probs=45.8
Q ss_pred cc-ceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 8 FL-MWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 8 ~l-~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
++ +||++.| +++++++|++..+|++||||++|+ +++.|.+. +...+++.|++++.|
T Consensus 109 ~~~~~~~~~d-~~~~~~~~~v~~~P~~~lid~~G~----i~~~g~~~----------~~~~l~~~l~~l~~g 165 (165)
T 3ha9_A 109 GDPSWIMVMD-DGSLVEKFNVRSIDYIVIMDKSSN----VLYAGTTP----------SLGELESVIKSVQGG 165 (165)
T ss_dssp SCTTSEEEEC-CSHHHHHTTCCSSSEEEEEETTCC----EEEEEESC----------CHHHHHHHHHHC---
T ss_pred CCCCeeEEeC-hHHHHHHhCCCCceEEEEEcCCCc----EEEeCCCC----------CHHHHHHHHHHHhcC
Confidence 45 8999999 999999999999999999999995 55677752 257999999998865
No 33
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=98.72 E-value=3.7e-08 Score=65.34 Aligned_cols=63 Identities=11% Similarity=0.165 Sum_probs=49.6
Q ss_pred cccceeEEEeC---hhHHHHHhC--CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 7 LFLMWLITLFQ---SQDVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 7 ~~l~fpvl~D~---~~~vA~~yg--a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.+++||++.|. ...++++|| +..+|++||||++|+ ++.+|.|..+ ...+++.|++++++++-
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~l~~l~~~~~~ 144 (151)
T 3raz_A 78 TPVSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCG--YRQTITGEVN-----------EKSLTDAVKLAHSKCRE 144 (151)
T ss_dssp SCCSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTT--EEEECCSCCC-----------HHHHHHHHHHHHTC---
T ss_pred cCCCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCc--EEEEECCCCC-----------HHHHHHHHHHHHHHhhc
Confidence 36789999986 567899999 999999999999997 5566666643 57899999999998764
Q ss_pred C
Q 034203 82 S 82 (101)
Q Consensus 82 ~ 82 (101)
.
T Consensus 145 ~ 145 (151)
T 3raz_A 145 G 145 (151)
T ss_dssp -
T ss_pred c
Confidence 4
No 34
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.72 E-value=5e-08 Score=67.12 Aligned_cols=62 Identities=13% Similarity=0.146 Sum_probs=44.2
Q ss_pred cccceeEEEeChhHHHHHhCCc----------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 7 LFLMWLITLFQSQDVARDFGAA----------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~----------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.+++||+|.|++++++++||+. ..|++||||++|+ ++|+-.-++. .. ......+-+++++|+
T Consensus 88 ~~~~fp~l~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~----I~~~~~~~~~-~~---~~~~~eil~~l~~l~ 159 (164)
T 4gqc_A 88 NRLAFNLLSDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGT----VAYKWVTDNP-LN---EPDYDEVVREANKIA 159 (164)
T ss_dssp TTCCSEEEECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSB----EEEEEECSCT-TC---CCCHHHHHHHHHHHH
T ss_pred cCcccceeecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCE----EEEEEEeCCC-CC---CCCHHHHHHHHHHHh
Confidence 3689999999999999999984 4789999999994 6665432221 11 123456666777654
No 35
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=98.71 E-value=4.1e-08 Score=62.37 Aligned_cols=53 Identities=13% Similarity=0.206 Sum_probs=44.9
Q ss_pred ceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 10 MWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 10 ~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
+||++.|.+++++++||+..+|++||||++|+ ++.+|.|..+ ...+.+.|+++
T Consensus 85 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~l~~l 137 (138)
T 4evm_A 85 NLPVLVDPSGKLLETYGVRSYPTQAFIDKEGK--LVKTHPGFME-----------KDAILQTLKEL 137 (138)
T ss_dssp TCCEEECTTCHHHHHTTCCSSSEEEEECTTCC--EEEEEESCCC-----------HHHHHHHHHHC
T ss_pred CeeEEECcchHHHHHcCcccCCeEEEECCCCc--EEEeecCCCc-----------HHHHHHHHHhh
Confidence 89999999999999999999999999999997 5566776532 56788887764
No 36
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.67 E-value=5.2e-08 Score=65.35 Aligned_cols=60 Identities=10% Similarity=0.124 Sum_probs=45.0
Q ss_pred ccceeEEEeChhHHHHHhCCcc------------cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 8 FLMWLITLFQSQDVARDFGAAC------------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~------------tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
+++||++.|.+++++++||+.. +|++||||++|+ |+.+|.|. .. ......+.++|++|
T Consensus 91 ~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~G~--i~~~~~~~-~~-------~~~~~~il~~l~~l 160 (163)
T 3gkn_A 91 GFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQ--VVQAWRKV-KV-------AGHADAVLAALKAH 160 (163)
T ss_dssp CCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTTSC--EEEEECSC-CS-------TTHHHHHHHHHHHH
T ss_pred CCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCCCe--EEEEEcCC-Cc-------ccCHHHHHHHHHHH
Confidence 6899999999999999999987 999999999996 44445322 11 11346677777776
Q ss_pred Hc
Q 034203 76 LS 77 (101)
Q Consensus 76 La 77 (101)
.+
T Consensus 161 ~~ 162 (163)
T 3gkn_A 161 AK 162 (163)
T ss_dssp CC
T ss_pred hc
Confidence 43
No 37
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=98.67 E-value=2.2e-08 Score=66.17 Aligned_cols=62 Identities=13% Similarity=0.130 Sum_probs=51.1
Q ss_pred ccceeEEEe---ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 8 FLMWLITLF---QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 8 ~l~fpvl~D---~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
.++||++.| ..+.++++||+..+|++||||++|+ ++.++.|.. +...+++.|++++.+++..
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~-----------~~~~l~~~l~~~~~~~~~~ 149 (154)
T 3ia1_A 85 PRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGK--VVALFAGRA-----------GREALLDALLLAGADLEGH 149 (154)
T ss_dssp TTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSE--EEEEEESBC-----------CHHHHHHHHHHTTCCC---
T ss_pred CCCcccccccccchHHHHHHhCCCcccEEEEECCCCC--EEEEEcCCC-----------CHHHHHHHHHhccCccccc
Confidence 568999998 8999999999999999999999996 555666663 3679999999999887654
No 38
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.67 E-value=5.8e-08 Score=65.52 Aligned_cols=62 Identities=15% Similarity=0.235 Sum_probs=48.5
Q ss_pred ccceeEEEeChhHHHHHhCCcc----cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 8 FLMWLITLFQSQDVARDFGAAC----TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~----tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
+++||++.|.+++++++||+.. +|++||||++|+ |+.+|.|.++.. .....+.++|++|-..
T Consensus 85 ~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~--i~~~~~g~~~~~-------~~~~~il~~l~~l~~~ 150 (161)
T 3drn_A 85 KLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGI--IRHIYNSQMNPA-------NHVNEALKALKQIKEE 150 (161)
T ss_dssp TCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSB--EEEEEECSSCTT-------HHHHHHHHHHHHHHHH
T ss_pred CCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCE--EEEEEecCCCCC-------cCHHHHHHHHHHhhhh
Confidence 6789999999999999999999 999999999997 666787754432 1345666666666443
No 39
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=98.64 E-value=5.5e-08 Score=64.71 Aligned_cols=58 Identities=16% Similarity=0.188 Sum_probs=48.7
Q ss_pred ccc-eeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 8 FLM-WLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 8 ~l~-fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.++ ||++.|.+++++++||+..+|++||||++|+ ++.++.|..+ ...+++.|+++++.
T Consensus 99 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 99 NYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGD--VQRIVKGSIN-----------EAQALALIRNPNAD 157 (164)
T ss_dssp CCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSC--EEEEEESCCC-----------HHHHHHHHHCTTCC
T ss_pred CCCcceEEEcCchHHHHHcCCCccceEEEECCCCc--EEEEEcCCCC-----------HHHHHHHHHHHHHH
Confidence 455 8999999999999999999999999999997 5556667643 56899999988764
No 40
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.64 E-value=7.6e-08 Score=63.37 Aligned_cols=57 Identities=12% Similarity=0.183 Sum_probs=45.8
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+++|| ++.|..++++++||+..+|++||||++|+ ++.++.|..+ ...+++.|+.+|+
T Consensus 95 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~--i~~~~~g~~~-----------~~~l~~~l~~~l~ 152 (156)
T 1kng_A 95 GNPFGRVGVDANGRASIEWGVYGVPETFVVGREGT--IVYKLVGPIT-----------PDNLRSVLLPQME 152 (156)
T ss_dssp CCCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSB--EEEEEESCCC-----------HHHHHHTHHHHHH
T ss_pred CCCCceeeeCchhHHHHhcCcCccCeEEEEcCCCC--EEEEEeCCCC-----------HHHHHHHHHHHHH
Confidence 57888 89999999999999999999999999996 5555777643 3566666666653
No 41
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=98.61 E-value=8.1e-08 Score=62.06 Aligned_cols=45 Identities=18% Similarity=0.319 Sum_probs=39.5
Q ss_pred cccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 7 LFLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
.+++||++.|.++.+++.|++..+|++||||++|+ ++.++.|..+
T Consensus 92 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~ 136 (145)
T 3erw_A 92 NKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGE--IEKTKIGPMT 136 (145)
T ss_dssp TTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCC--EEEEEESCCC
T ss_pred cCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCc--EEEEEcCCcC
Confidence 36789999999999999999999999999999997 5566777643
No 42
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.59 E-value=1.2e-07 Score=63.22 Aligned_cols=60 Identities=12% Similarity=0.075 Sum_probs=47.3
Q ss_pred ccceeEEEeC--hhHHHHHhCCc----ccc--eEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 8 FLMWLITLFQ--SQDVARDFGAA----CTP--EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 8 ~l~fpvl~D~--~~~vA~~yga~----~tP--~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
+++||++.|. +++++++||+. .+| ++||||++|+ |+.++.|..+.. .....+.++|+++.
T Consensus 92 ~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~--i~~~~~g~~~~~-------~~~~~l~~~l~~l~ 159 (160)
T 1xvw_A 92 GFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGI--IRFAEMKQPGEV-------RDQRLWTDALAALT 159 (160)
T ss_dssp TCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSB--EEEEEECCTTCC-------CCHHHHHHHHHHTC
T ss_pred CCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCe--EEEEEecCCCCC-------CCHHHHHHHHHHhc
Confidence 5789999995 89999999998 888 9999999997 666677765432 13567777777664
No 43
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.59 E-value=3.6e-07 Score=60.52 Aligned_cols=61 Identities=21% Similarity=0.388 Sum_probs=50.3
Q ss_pred ccceeEEEeC---hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC
Q 034203 8 FLMWLITLFQ---SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSN 84 (101)
Q Consensus 8 ~l~fpvl~D~---~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~~ 84 (101)
.++||++.|. .++++++||+..+|++||||++| +++++. ++ ...+++.|++++++......
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~-~~-----------~~~l~~~l~~l~~~~~~~~~ 148 (152)
T 2lrn_A 85 KSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEG----KIVAKE-LR-----------GDDLYNTVEKFVNGAKEGHH 148 (152)
T ss_dssp TCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTS----EEEEEC-CC-----------TTHHHHHHHHHHTSSSSCCS
T ss_pred CCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCC----eEEEee-CC-----------HHHHHHHHHHHHhhcccccc
Confidence 6789999999 79999999999999999999999 466554 11 24899999999998765543
No 44
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.59 E-value=2.1e-07 Score=62.71 Aligned_cols=62 Identities=8% Similarity=0.003 Sum_probs=46.7
Q ss_pred cc-ceeEEEe-ChhHHHHHhCCcc------cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 8 FL-MWLITLF-QSQDVARDFGAAC------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 8 ~l-~fpvl~D-~~~~vA~~yga~~------tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
++ +||++.| .+++++++||+.. +|++||||++|+ |+.+|.|.-... ......+.++|++||+
T Consensus 98 ~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~--i~~~~~g~~~~~------~~~~~~l~~~l~~llk 167 (167)
T 2jsy_A 98 GIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGK--VVYAEYVSEATN------HPNYEKPIEAAKALVK 167 (167)
T ss_dssp SCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSC--EEEEEECSBTTS------CCCSHHHHHHHHHHHC
T ss_pred CCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCc--EEEEEecCCcCC------CCCHHHHHHHHHHhhC
Confidence 56 8999999 9999999999987 599999999996 555555541111 1134678888888874
No 45
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.59 E-value=1.2e-07 Score=65.23 Aligned_cols=44 Identities=23% Similarity=0.280 Sum_probs=37.8
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
.++|| ++.|.++.++++||+..+|++||||++|+ ++.+|.|.++
T Consensus 110 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~ 154 (176)
T 3kh7_A 110 HNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGI--IRHKIVGVVD 154 (176)
T ss_dssp TCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCB--EEEEEESCCC
T ss_pred CCCCceEEECCcchHHHHcCCCCCCeEEEECCCCe--EEEEEcCCCC
Confidence 56777 68999999999999999999999999996 5666777754
No 46
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=98.58 E-value=1.2e-07 Score=72.40 Aligned_cols=61 Identities=10% Similarity=0.023 Sum_probs=45.9
Q ss_pred cccceeEEEeChhHHHHHhCC----cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 7 LFLMWLITLFQSQDVARDFGA----ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga----~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.+++||+|.|++++++++||+ ...|++||||++|+ |+.+|++- .-. -...++-++|++++.
T Consensus 75 ~~l~fp~l~D~~~~v~~~ygv~~~~~~~r~tfiId~~G~--i~~~~~~v-~~~-------~h~~~~l~~~~~~~~ 139 (322)
T 4eo3_A 75 NDLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGF--VRKEWRRV-KVE-------GHVQEVKEALDRLIE 139 (322)
T ss_dssp HTCCSEEEECTTCHHHHHTTCEETTEECCEEEEECTTSB--EEEEEESC-CST-------THHHHHHHHHHHHHH
T ss_pred hCCceEEEEcCchHHHHhcCCCCCCcCccEEEEECCCCE--EEEEEeCC-Ccc-------ccHHHHHHHHhhhch
Confidence 368999999999999999998 46899999999996 66667653 211 023566667777654
No 47
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.57 E-value=8.4e-08 Score=65.57 Aligned_cols=62 Identities=18% Similarity=0.025 Sum_probs=49.6
Q ss_pred cc-ceeEEEeChhHHHHHhCCc----ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 8 FL-MWLITLFQSQDVARDFGAA----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 8 ~l-~fpvl~D~~~~vA~~yga~----~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
++ .||++.|.++.++++|++. .+|++||||++|+ ++.+|.|..+. +...+.+.|+++|+++.
T Consensus 117 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~--i~~~~~g~~~~---------~~~~l~~~l~~ll~~~a 183 (186)
T 1jfu_A 117 NLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGC--EIATIAGPAEW---------ASEDALKLIRAATGKAA 183 (186)
T ss_dssp TCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSB--EEEEEESCCCT---------TSHHHHHHHHHHHC---
T ss_pred CCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCC--EEEEEecCCcc---------CHHHHHHHHHHHhcccc
Confidence 45 5999999999999999986 8999999999997 66677787432 24689999999998754
No 48
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.56 E-value=9.5e-08 Score=65.29 Aligned_cols=59 Identities=17% Similarity=0.116 Sum_probs=49.5
Q ss_pred cccceeEEEeChhHHHHHhC---CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 7 LFLMWLITLFQSQDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.+++||++.|.++.+++.|| +..+|++||||++|+ ++.+|.|.+ +...+++.|+.+|+.
T Consensus 121 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~-----------~~~~l~~~l~~ll~~ 182 (183)
T 3lwa_A 121 NGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHR--PAAVFLREV-----------TSKDVLDVALPLVDE 182 (183)
T ss_dssp TTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSC--EEEEECSCC-----------CHHHHHHHHHHHHHC
T ss_pred cCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCc--EEEEEcCCC-----------CHHHHHHHHHHHHhc
Confidence 36889999999999999996 789999999999997 555666653 367899999999864
No 49
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.56 E-value=1.4e-07 Score=63.11 Aligned_cols=46 Identities=15% Similarity=0.237 Sum_probs=41.3
Q ss_pred cccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCC
Q 034203 7 LFLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDD 54 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd 54 (101)
..++||++.|.+++++++||+..+|++||||++|+ ++.+|.|..+.
T Consensus 93 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~G~~~~ 138 (158)
T 3hdc_A 93 APVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGI--IRQRVTGGIEW 138 (158)
T ss_dssp CCCSCEEEECTTSHHHHHTTCCSSSEEEEECTTSB--EEEEEESCCCT
T ss_pred cCCCceEEECchHHHHHHhCCCCcceEEEEcCCCC--EEEEEeCCCcc
Confidence 36789999999999999999999999999999997 77778888654
No 50
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=98.55 E-value=1e-07 Score=70.09 Aligned_cols=77 Identities=14% Similarity=0.261 Sum_probs=45.3
Q ss_pred ccceeEEEeChhHHHHHhCCcc------cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAAC------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~------tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||+|.|++++++++||+-. ...+||||++|+ |+..+.-.+.-.+ ...++-++|++|-...
T Consensus 119 ~l~fpllsD~~~~va~~yGv~~~~~g~~~R~tFiIDp~g~--Ir~~~~~~~~~gr-------~~~EvLr~l~aLQ~~~-- 187 (219)
T 3tue_A 119 TMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGM--LRQITVNDMPVGR-------SVEEVLRLLEAFQFVE-- 187 (219)
T ss_dssp SCSSCEEECTTSHHHHHTTCEETTTTEECEEEEEECTTSB--EEEEEEECTTCCC-------CHHHHHHHHHHHHHHH--
T ss_pred ccccccccCcccHHHHHcCCcccCCCeeEEEEEEECCCCe--EEEEEEecCCCCC-------CHHHHHHHHHHhhhHH--
Confidence 5899999999999999999853 368999999996 4444433332211 2466777788775432
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
.....|+..|++|+
T Consensus 188 ----~~~~~~Pa~W~~G~ 201 (219)
T 3tue_A 188 ----KHGEVCPANWKKGD 201 (219)
T ss_dssp ----HC------------
T ss_pred ----hcCCCcCCCCCCCC
Confidence 22468999998774
No 51
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.55 E-value=1.3e-07 Score=73.26 Aligned_cols=59 Identities=14% Similarity=0.151 Sum_probs=50.0
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
+++||++.|.+++++++|++..+|++||||++|+ ++.++.|..+ ...+++.|+++|+..
T Consensus 143 ~l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~--Iv~~~~G~~~-----------~~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 143 GISYPIALDNNYATWTNYRNRYWPAEYLIDATGT--VRHIKFGEGD-----------YNVTETLVRQLLNDA 201 (352)
T ss_dssp TCCSCEEECTTSHHHHHTTCCEESEEEEECTTSB--EEEEEESBCC-----------HHHHHHHHHHHHHHH
T ss_pred CCCccEEeCCcHHHHHHcCCCccCEEEEEeCCCe--EEEEEcCCCC-----------HHHHHHHHHHHHhhc
Confidence 6789999999999999999999999999999997 6666777643 467888888888654
No 52
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.54 E-value=2.2e-07 Score=64.21 Aligned_cols=60 Identities=8% Similarity=0.072 Sum_probs=44.2
Q ss_pred ccceeEEEeChhHHHHHhCCcc------------cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 8 FLMWLITLFQSQDVARDFGAAC------------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~------------tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
+++||++.|.+++++++||+.. +|++||||++|+ |+.+|.|. .. ......+.++|++|
T Consensus 107 ~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~--I~~~~~~~-~~-------~~~~~~il~~l~~l 176 (179)
T 3ixr_A 107 GFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHR--IVEAWRQV-KV-------PGHAEEVLNKLKAH 176 (179)
T ss_dssp TCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSB--EEEEECSC-CS-------TTHHHHHHHHHHHH
T ss_pred CCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCCE--EEEEEcCC-CC-------CCCHHHHHHHHHHH
Confidence 6899999999999999999864 688999999996 44445322 11 12356777777776
Q ss_pred Hc
Q 034203 76 LS 77 (101)
Q Consensus 76 La 77 (101)
.+
T Consensus 177 ~~ 178 (179)
T 3ixr_A 177 AE 178 (179)
T ss_dssp HC
T ss_pred hc
Confidence 53
No 53
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=98.53 E-value=2.7e-07 Score=67.78 Aligned_cols=77 Identities=12% Similarity=0.179 Sum_probs=51.9
Q ss_pred ccceeEEEeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWLITLFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.++||+|.|.+++++++||+. ..+.+||||++|+ ++|.= +.+... .+ ...++-++|++|-....
T Consensus 115 ~l~fpllsD~~~~vak~YGv~~~~~g~~~R~tFiID~~G~----Ir~~~-v~~~~~-gr---n~dEiLr~l~AlQ~~~~- 184 (216)
T 3sbc_A 115 PINIPLLADTNHSLSRDYGVLIEEEGVALRGLFIIDPKGV----IRHIT-INDLPV-GR---NVDEALRLVEAFQWTDK- 184 (216)
T ss_dssp SCSSCEEECTTSHHHHHHTCEETTTTEECEEEEEECTTSB----EEEEE-EECTTB-CC---CHHHHHHHHHHHHHHHH-
T ss_pred CcccceEeCCCCHHHHHcCCeeccCCceeeEEEEECCCCe----EEEEE-EcCCCC-CC---CHHHHHHHHHHhhhHhh-
Confidence 589999999999999999984 4688999999994 66542 222211 11 35667778888763211
Q ss_pred CCCCCCCCcceeeeeCCC
Q 034203 82 SSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 82 ~~~~t~~~GC~I~~~~~~ 99 (101)
+ -..|...|++|+
T Consensus 185 ----~-~~~~Pa~W~~G~ 197 (216)
T 3sbc_A 185 ----N-GTVLPCNWTPGA 197 (216)
T ss_dssp ----H-CCBBCTTCCTTS
T ss_pred ----c-CCCcCCCCCCCC
Confidence 1 235666676654
No 54
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.51 E-value=1.9e-07 Score=62.72 Aligned_cols=61 Identities=20% Similarity=0.203 Sum_probs=48.2
Q ss_pred ccce---eEEEeChhHHHHHhC----------------CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHH
Q 034203 8 FLMW---LITLFQSQDVARDFG----------------AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDI 68 (101)
Q Consensus 8 ~l~f---pvl~D~~~~vA~~yg----------------a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L 68 (101)
+++| |++.|.+++++++|+ +..+|++||||++|+ |+.+|.|..+. +...+
T Consensus 95 ~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~--i~~~~~g~~~~---------~~~~l 163 (174)
T 1xzo_A 95 PLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGK--VLKDYNGVENT---------PYDDI 163 (174)
T ss_dssp CCCGGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSE--EEEEEESSSSC---------CHHHH
T ss_pred CCCCcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCe--EEEEEcCCCCC---------CHHHH
Confidence 4667 999999999888875 467999999999996 56667777531 25789
Q ss_pred HHHHHHHHcCC
Q 034203 69 RLAIECVLSGQ 79 (101)
Q Consensus 69 ~~AI~alLag~ 79 (101)
.++|+++|+.+
T Consensus 164 ~~~l~~ll~~k 174 (174)
T 1xzo_A 164 ISDVKSASTLK 174 (174)
T ss_dssp HHHHHHHTCCC
T ss_pred HHHHHHHHhcC
Confidence 99999998754
No 55
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.51 E-value=2.6e-07 Score=61.06 Aligned_cols=55 Identities=20% Similarity=0.358 Sum_probs=46.3
Q ss_pred cccceeEEEeC---hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 7 LFLMWLITLFQ---SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 7 ~~l~fpvl~D~---~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.+++||++.|. +++++++||+..+|++||||++|+ ++++.. +...+++.|+++|+
T Consensus 91 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~----i~~~~~------------~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 91 DTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGK----ILAKNL------------RGEELKKKIENIVE 148 (150)
T ss_dssp TTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSB----EEEESC------------CHHHHHHHHHHHHH
T ss_pred hCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCE----EEEccC------------CHHHHHHHHHHHHh
Confidence 36799999998 789999999999999999999994 666542 25688999988875
No 56
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=98.51 E-value=4e-07 Score=67.08 Aligned_cols=63 Identities=13% Similarity=0.120 Sum_probs=49.8
Q ss_pred cc-ceeEEEeC-hhHHHHHhCCcc---------cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 8 FL-MWLITLFQ-SQDVARDFGAAC---------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 8 ~l-~fpvl~D~-~~~vA~~yga~~---------tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
++ +||+|.|. +++++++||+.. +|++||||++| +++|++..++... ......+.++|+++.
T Consensus 104 gl~~fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG----~I~~~~~~~~~~~----~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 104 GLPNIALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAAN----VVHYSERLANTRD----FFDFDAIEKLLQEGE 175 (224)
T ss_dssp CCTTCEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTC----BEEEEEECSBTTC----CCCHHHHHHHHHHHH
T ss_pred CCCCceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCC----EEEEEEecCCCCC----CCCHHHHHHHHHHhh
Confidence 56 69999998 699999999875 79999999999 6889888655321 124677888888776
Q ss_pred cC
Q 034203 77 SG 78 (101)
Q Consensus 77 ag 78 (101)
..
T Consensus 176 ~~ 177 (224)
T 3keb_A 176 QQ 177 (224)
T ss_dssp HH
T ss_pred hc
Confidence 54
No 57
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.50 E-value=2.3e-07 Score=62.23 Aligned_cols=56 Identities=18% Similarity=0.164 Sum_probs=43.4
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
+++|| ++.|.++++++.||+..+|++||||++|+ ++.++.|..+ ...+++.|+.+|
T Consensus 103 ~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~l~~~l 159 (168)
T 2b1k_A 103 GNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGI--IRYRHAGDLN-----------PRVWEEEIKPLW 159 (168)
T ss_dssp CCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSB--EEEEEESCCC-----------HHHHHHTTHHHH
T ss_pred CCCCceeeECcchHHHHHcCccccCEEEEECCCCe--EEEEEeCCCC-----------HHHHHHHHHHHH
Confidence 56788 68999999999999999999999999996 5556667643 345555555554
No 58
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.50 E-value=4.1e-07 Score=61.51 Aligned_cols=59 Identities=14% Similarity=0.038 Sum_probs=42.6
Q ss_pred cc-ceeEEEe-ChhHHHHHhCCcc------cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 8 FL-MWLITLF-QSQDVARDFGAAC------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 8 ~l-~fpvl~D-~~~~vA~~yga~~------tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
++ +||++.| .+++++++||+.. +|++||||++|+ |+.+|.|.-... ......+.++|++
T Consensus 96 ~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~--i~~~~~g~~~~~------~~~~~~~l~~l~~ 162 (163)
T 1psq_A 96 GLDNAIMLSDYFDHSFGRDYALLINEWHLLARAVFVLDTDNT--IRYVEYVDNINS------EPNFEAAIAAAKA 162 (163)
T ss_dssp TCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEEEEECTTCB--EEEEEECSBTTS------CCCHHHHHHHHHH
T ss_pred CCCCcEEecCCchhHHHHHhCCccccCCceEEEEEEEcCCCe--EEEEEecCCcCC------CCCHHHHHHHHHh
Confidence 57 8999999 8999999999874 599999999996 555555541111 1134566666664
No 59
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.49 E-value=3.4e-07 Score=62.09 Aligned_cols=40 Identities=15% Similarity=0.272 Sum_probs=34.8
Q ss_pred cc-ceeEEEeC-hhHHHHHhCCcc------cceEEEEeCCCCCceeEEEeec
Q 034203 8 FL-MWLITLFQ-SQDVARDFGAAC------TPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 8 ~l-~fpvl~D~-~~~vA~~yga~~------tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
++ +||++.|. +++++++||+.. +|++||||++|+ ++|+..
T Consensus 99 ~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~----i~~~~~ 146 (166)
T 3p7x_A 99 GLDNVITLSDHRDLSFGENYGVVMEELRLLARAVFVLDADNK----VVYKEI 146 (166)
T ss_dssp TCSSCEEEECTTTCHHHHHHTCEETTTTEECCEEEEECTTCB----EEEEEE
T ss_pred CCCceEEccCCchhHHHHHhCCccccCCceeeEEEEECCCCe----EEEEEE
Confidence 57 89999999 999999999986 999999999995 565543
No 60
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.49 E-value=2.3e-07 Score=62.08 Aligned_cols=57 Identities=18% Similarity=0.260 Sum_probs=43.8
Q ss_pred cccceeEEEeChhH---HHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 7 LFLMWLITLFQSQD---VARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 7 ~~l~fpvl~D~~~~---vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
..++||++.|.++. ++++||+..+|++||||++|+ ++.++.|. ..+++.+.++++|.
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~--------------~~~e~~~~~~~~~~ 147 (152)
T 2lrt_A 88 DNLPWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNE--LSARGENI--------------KDLDEAIKKLLEGH 147 (152)
T ss_dssp TTCSSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTE--EEEETTTC--------------SCHHHHHHHHHGGG
T ss_pred hCCCceEEECCCCcchHHHHHcCcccCceEEEECCCCe--EEEecCCH--------------HHHHHHHHHHHhcc
Confidence 45899999999997 999999999999999999994 33333332 24666777777663
No 61
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=98.48 E-value=4.5e-07 Score=60.10 Aligned_cols=60 Identities=17% Similarity=0.317 Sum_probs=47.5
Q ss_pred cccceeEEEeChhHHHHHh------CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 7 LFLMWLITLFQSQDVARDF------GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~y------ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
.+++||++.|.. ++++.| ++..+|++||||++|+ ++.+|.|.. +...+++.|+++|+...
T Consensus 89 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~P~~~lid~~G~--i~~~~~g~~-----------~~~~l~~~l~~~l~~~~ 154 (165)
T 3or5_A 89 QGIIYPVMMATP-ELIRAFNGYIDGGITGIPTSFVIDASGN--VSGVIVGPR-----------SKADFDRIVKMALGAKA 154 (165)
T ss_dssp HTCCSCEEECCH-HHHHHHHTTSTTCSCSSSEEEEECTTSB--EEEEECSCC-----------CHHHHHHHHHHHHC---
T ss_pred cCCCCceEecCH-HHHHHHhhhhccCCCCCCeEEEECCCCc--EEEEEcCCC-----------CHHHHHHHHHHHHhhhc
Confidence 367899999986 899999 8999999999999996 555566664 25789999999997643
No 62
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.47 E-value=3.2e-07 Score=59.51 Aligned_cols=56 Identities=16% Similarity=0.244 Sum_probs=46.1
Q ss_pred cccceeEEEeC---hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 7 LFLMWLITLFQ---SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 7 ~~l~fpvl~D~---~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.+++||++.|. ++.++++||+..+|++||||++|+ ++++.. +...+++.|+++|+.
T Consensus 89 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~----i~~~~~------------~~~~l~~~l~~ll~~ 147 (148)
T 3fkf_A 89 DTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGK----ILARDI------------QGEALTGKLKELLKT 147 (148)
T ss_dssp TTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSB----EEEESC------------CHHHHHHHHHHHC--
T ss_pred cCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCe----EEEecC------------CHHHHHHHHHHHHcc
Confidence 46789999998 789999999999999999999994 666544 257899999998864
No 63
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=98.45 E-value=2.9e-07 Score=60.43 Aligned_cols=58 Identities=10% Similarity=0.119 Sum_probs=45.9
Q ss_pred eeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 11 WLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 11 fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
++++.|.+++++++||+..+|++||||++|+ ++.++.|.. +...+++.|+.++++.+-
T Consensus 90 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~--i~~~~~g~~-----------~~~~l~~~l~~~~~~~~~ 147 (152)
T 2lja_A 90 IQLHMGTDRTFMDAYLINGIPRFILLDRDGK--IISANMTRP-----------SDPKTAEKFNELLGLEGH 147 (152)
T ss_dssp EEEECSSCTHHHHHTTCCSSCCEEEECTTSC--EEESSCCCT-----------TCHHHHHHHHHHHTCCSS
T ss_pred ceeecCcchhHHHHcCcCCCCEEEEECCCCe--EEEccCCCC-----------CHHHHHHHHHHHhccccc
Confidence 5788899999999999999999999999995 322233332 246899999999988653
No 64
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.44 E-value=2.9e-07 Score=59.94 Aligned_cols=54 Identities=9% Similarity=0.238 Sum_probs=43.1
Q ss_pred cccceeEEEeChhHHHH--HhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 7 LFLMWLITLFQSQDVAR--DFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~--~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.+++||++.|.++.++. .||+..+|++||||++| ++++++ .+...+++.|++++
T Consensus 85 ~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~------------~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 85 MPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRK----RVILKD------------TSMEQLIDYLATQA 140 (142)
T ss_dssp SCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTC----BEEECS------------CCHHHHHHHHHC--
T ss_pred cCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCC----CEEecC------------CCHHHHHHHHHHHc
Confidence 35789999999999988 99999999999999999 466632 13568888887654
No 65
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.41 E-value=4e-07 Score=60.44 Aligned_cols=58 Identities=17% Similarity=0.184 Sum_probs=46.6
Q ss_pred ccceeEE---EeChhHHHHHhCCcccc---------------eEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHH
Q 034203 8 FLMWLIT---LFQSQDVARDFGAACTP---------------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (101)
Q Consensus 8 ~l~fpvl---~D~~~~vA~~yga~~tP---------------~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~ 69 (101)
+++||++ .|..++++++||+..+| ++||||++|+ ++.+|.|.. +...+.
T Consensus 87 ~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~--i~~~~~g~~-----------~~~~l~ 153 (164)
T 2ggt_A 87 SPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGE--FLDYFGQNK-----------RKGEIA 153 (164)
T ss_dssp CSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSC--EEEEEETTC-----------CHHHHH
T ss_pred CCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCe--EEEEeCCCC-----------CHHHHH
Confidence 5789988 47778899999999999 8999999997 555565553 257899
Q ss_pred HHHHHHHcC
Q 034203 70 LAIECVLSG 78 (101)
Q Consensus 70 ~AI~alLag 78 (101)
+.|+++|+.
T Consensus 154 ~~l~~ll~~ 162 (164)
T 2ggt_A 154 ASIATHMRP 162 (164)
T ss_dssp HHHHHHHGG
T ss_pred HHHHHHHHh
Confidence 999998863
No 66
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.41 E-value=4.1e-07 Score=61.86 Aligned_cols=60 Identities=10% Similarity=0.139 Sum_probs=43.1
Q ss_pred cc-ceeEEEe-ChhHHHHHhCCcc---------cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 8 FL-MWLITLF-QSQDVARDFGAAC---------TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 8 ~l-~fpvl~D-~~~~vA~~yga~~---------tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
++ +||++.| +++++ ++||+.. +|++||||++|+ |+.+|.|.-.... .....+.++|++||
T Consensus 101 ~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~--i~~~~~~~~~~~~------~~~~~ll~~l~~ll 171 (171)
T 2yzh_A 101 NIQNVTVASDFRYRDM-EKYGVLIGEGALKGILARAVFIIDKEGK--VAYVQLVPEITEE------PNYDEVVNKVKELI 171 (171)
T ss_dssp TCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSBCCEEEEECTTSB--EEEEEECSBTTSC------CCCHHHHHHHHHC-
T ss_pred CCCCeEEeecCccCcH-HHhCCEecccccCCceeeEEEEEcCCCe--EEEEEeCCCcCCC------CCHHHHHHHHHhhC
Confidence 56 8999999 88999 9999863 799999999996 5555555311111 12467888888765
No 67
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.39 E-value=7.9e-07 Score=60.98 Aligned_cols=60 Identities=8% Similarity=0.059 Sum_probs=44.1
Q ss_pred cc-ceeEEEeChhHHHHHhCCccc---------ceEEEEeCCCCCceeEEEeec-CCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 8 FL-MWLITLFQSQDVARDFGAACT---------PEFFLFKKDGRRPFQLVYHGQ-FDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 8 ~l-~fpvl~D~~~~vA~~yga~~t---------P~~fliD~~G~~~v~~~Y~G~-idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
++ +||++.|.+++++++||+..+ |++||||++|+ |+.++.|. +.+ ...+++.|+++.
T Consensus 97 ~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~--I~~~~~g~~~~~----------~~~~~~~l~~l~ 164 (175)
T 1xvq_A 97 GTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGN--VAYTELVPEIAQ----------EPNYEAALAALG 164 (175)
T ss_dssp ---CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSB--EEEEEECSBTTC----------CCCHHHHHHHHH
T ss_pred CCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCe--EEEEEECCCcCC----------CCCHHHHHHHHH
Confidence 45 799999999999999999887 99999999996 44455532 221 125777777777
Q ss_pred cCC
Q 034203 77 SGQ 79 (101)
Q Consensus 77 ag~ 79 (101)
+..
T Consensus 165 ~~~ 167 (175)
T 1xvq_A 165 ATS 167 (175)
T ss_dssp HTC
T ss_pred hhc
Confidence 543
No 68
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=98.39 E-value=5.3e-07 Score=58.48 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=34.3
Q ss_pred ccc-eeEEEeChhH--HHHHhCCcccceEEEEeCCCCCceeEEEee
Q 034203 8 FLM-WLITLFQSQD--VARDFGAACTPEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 8 ~l~-fpvl~D~~~~--vA~~yga~~tP~~fliD~~G~~~v~~~Y~G 50 (101)
+++ ||++.|.++. +++.||+..+|++||||++|+ ++.++.|
T Consensus 87 ~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~--i~~~~~g 130 (148)
T 3hcz_A 87 KIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKV--IIAKRIG 130 (148)
T ss_dssp TCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCB--EEEESCC
T ss_pred CCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCc--EEEecCC
Confidence 455 9999999999 999999999999999999995 3334443
No 69
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.36 E-value=9.4e-07 Score=62.54 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=34.6
Q ss_pred cc-ceeEEEeC-hhHHHHHhCCc---------ccceEEEEeCCCCCceeEEEeec
Q 034203 8 FL-MWLITLFQ-SQDVARDFGAA---------CTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 8 ~l-~fpvl~D~-~~~vA~~yga~---------~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
++ +||++.|. +++++++||+. .+|++||||++|+ ++|+..
T Consensus 132 ~~~~f~~l~D~~~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~----I~~~~~ 182 (200)
T 3zrd_A 132 GLSNVITLSTLRGADFKQAYGVAITEGPLAGLTARAVVVLDGQDN----VIYSEL 182 (200)
T ss_dssp TCTTEEEEETTSCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSB----EEEEEE
T ss_pred CCCCceEEecCchHHHHHHhCceeecccCCCccccEEEEECCCCe----EEEEEe
Confidence 67 99999999 99999999987 3799999999994 666544
No 70
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.31 E-value=7.3e-07 Score=59.79 Aligned_cols=41 Identities=22% Similarity=0.311 Sum_probs=35.1
Q ss_pred ccceeEEEeChhHHHHHhCCcccc------eEEEEeCCCCCceeEEEeec
Q 034203 8 FLMWLITLFQSQDVARDFGAACTP------EFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP------~~fliD~~G~~~v~~~Y~G~ 51 (101)
+++||++.|.+++++++||+..+| ++||| ++|+ |+.++.|.
T Consensus 90 ~~~~~~l~D~~~~~~~~~gv~~~p~~g~~~~~~li-~~G~--i~~~~~g~ 136 (159)
T 2a4v_A 90 NLPYHLLSDPKREFIGLLGAKKTPLSGSIRSHFIF-VDGK--LKFKRVKI 136 (159)
T ss_dssp TCSSEEEECTTCHHHHHHTCBSSSSSCBCCEEEEE-ETTE--EEEEEESC
T ss_pred CCCceEEECCccHHHHHhCCcccccCCccceEEEE-cCCE--EEEEEccC
Confidence 578999999999999999999998 99999 9995 44555554
No 71
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.30 E-value=2e-06 Score=57.54 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=46.2
Q ss_pred ccceeEEEeCh---hHHHHHhCCcccc---------------eEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHH
Q 034203 8 FLMWLITLFQS---QDVARDFGAACTP---------------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (101)
Q Consensus 8 ~l~fpvl~D~~---~~vA~~yga~~tP---------------~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~ 69 (101)
+++||++.|.. +.++++||+..+| ++||||++|+ ++.+|.|..+ ...+.
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~ 156 (171)
T 2rli_A 90 HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGL--FTDYYGRSRS-----------AEQIS 156 (171)
T ss_dssp CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSC--EEEEEESSCC-----------HHHHH
T ss_pred CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCe--EEEEECCCCC-----------HHHHH
Confidence 46789888743 5899999999888 8999999997 6666666532 56899
Q ss_pred HHHHHHHcC
Q 034203 70 LAIECVLSG 78 (101)
Q Consensus 70 ~AI~alLag 78 (101)
+.|+++|+.
T Consensus 157 ~~l~~ll~~ 165 (171)
T 2rli_A 157 DSVRRHMAA 165 (171)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998875
No 72
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.28 E-value=1.4e-06 Score=59.02 Aligned_cols=41 Identities=2% Similarity=-0.074 Sum_probs=34.1
Q ss_pred cc-ceeEEEeC-hhHHHHHhCCcc---------cceEEEEeCCCCCceeEEEee
Q 034203 8 FL-MWLITLFQ-SQDVARDFGAAC---------TPEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 8 ~l-~fpvl~D~-~~~vA~~yga~~---------tP~~fliD~~G~~~v~~~Y~G 50 (101)
++ +||++.|. +++++++||+.. +|++||||++|+ |+.++.|
T Consensus 97 ~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~--i~~~~~~ 148 (165)
T 1q98_A 97 GIENAKTVSTFRNHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNN--VLHSQLV 148 (165)
T ss_dssp TCTTEEEEECTTCTHHHHHTTCEECSSTTTTSBCCEEEEECTTSB--EEEEEEC
T ss_pred CCCceEEeeccccchHHHHhCceecccccCCccceeEEEEcCCCE--EEEEEeC
Confidence 57 79999998 899999999874 599999999996 4445554
No 73
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.23 E-value=2.2e-06 Score=59.93 Aligned_cols=39 Identities=5% Similarity=-0.118 Sum_probs=32.1
Q ss_pred ccc--eeEEEeChhHHHHHhCCc-------------ccceEEEEeCCCCCceeEEEeec
Q 034203 8 FLM--WLITLFQSQDVARDFGAA-------------CTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 8 ~l~--fpvl~D~~~~vA~~yga~-------------~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
+++ ||+|.|++++++++||+. ..|++|||| +|+ ++|.-.
T Consensus 101 ~~~~~fp~l~D~~~~va~~yGv~~~~~~~~~~g~~~~~r~tfvID-dG~----I~~~~v 154 (173)
T 3mng_A 101 KAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQ-DGI----VKALNV 154 (173)
T ss_dssp TCTTTCEEEECTTCHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEE-TTE----EEEEEE
T ss_pred CCCCceEEEECCChHHHHHhCCCcccccccccCCcceEEEEEEEE-CCE----EEEEEE
Confidence 455 999999999999999986 349999999 994 555543
No 74
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.22 E-value=6.6e-07 Score=59.65 Aligned_cols=60 Identities=17% Similarity=0.064 Sum_probs=43.9
Q ss_pred cccceeEEE--eChhHHHH-Hh--------C-----CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHH
Q 034203 7 LFLMWLITL--FQSQDVAR-DF--------G-----AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRL 70 (101)
Q Consensus 7 ~~l~fpvl~--D~~~~vA~-~y--------g-----a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~ 70 (101)
.+++||++. |.++.++. .| | +..+|++||||++|+ ++.+|.|..+ ...+++
T Consensus 94 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l~~ 160 (169)
T 2v1m_A 94 YGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQ--PVKRYSPTTA-----------PYDIEG 160 (169)
T ss_dssp HCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSC--EEEEECTTSC-----------GGGGHH
T ss_pred cCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCC--EEEEcCCCCC-----------HHHHHH
Confidence 367899995 87777653 33 6 445699999999997 5666667543 247889
Q ss_pred HHHHHHcCC
Q 034203 71 AIECVLSGQ 79 (101)
Q Consensus 71 AI~alLag~ 79 (101)
.|+++|+.+
T Consensus 161 ~i~~ll~~k 169 (169)
T 2v1m_A 161 DIMELLEKK 169 (169)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHhccC
Confidence 999998764
No 75
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.51 E-value=1.8e-07 Score=62.25 Aligned_cols=59 Identities=8% Similarity=0.097 Sum_probs=44.0
Q ss_pred ccceeEEEeChhHHHHHhCC--cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 8 FLMWLITLFQSQDVARDFGA--ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga--~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
+++||++.|.+++++++||+ ..+|++||||++|+ ++.++.|. + ...+++.|+++.+...
T Consensus 91 ~~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~--i~~~~~g~-~-----------~~~l~~~l~~l~~~~~ 151 (159)
T 2ls5_A 91 GVTYPLGLDPGADIFAKYALRDAGITRNVLIDREGK--IVKLTRLY-N-----------EEEFASLVQQINEMLK 151 (159)
Confidence 57899999999999999995 45999999999996 33334442 2 2356777777666543
No 76
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.19 E-value=1.9e-06 Score=57.48 Aligned_cols=57 Identities=21% Similarity=0.324 Sum_probs=44.6
Q ss_pred ccceeEEEeCh---hHHHHHhCC---------------cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHH
Q 034203 8 FLMWLITLFQS---QDVARDFGA---------------ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (101)
Q Consensus 8 ~l~fpvl~D~~---~~vA~~yga---------------~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~ 69 (101)
+++||++.|+. ++++++||+ ..+|++|||| +|+ ++.+|.|... .+...+.
T Consensus 98 ~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~--i~~~~~g~~~---------~~~~~l~ 165 (172)
T 2k6v_A 98 HPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGR--LVLLYSPDKA---------EATDRVV 165 (172)
T ss_dssp CTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTE--EEEEECHHHH---------TCHHHHH
T ss_pred CCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCE--EEEEECCCCC---------CCHHHHH
Confidence 47899999998 789999985 4789999999 996 6666777651 0256888
Q ss_pred HHHHHHH
Q 034203 70 LAIECVL 76 (101)
Q Consensus 70 ~AI~alL 76 (101)
+.|+++|
T Consensus 166 ~~l~~ll 172 (172)
T 2k6v_A 166 ADLQALL 172 (172)
T ss_dssp HHHHHCC
T ss_pred HHHHHhC
Confidence 8888764
No 77
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.18 E-value=2.1e-06 Score=58.29 Aligned_cols=38 Identities=11% Similarity=-0.100 Sum_probs=32.7
Q ss_pred cc--ceeEEEeChhHHHHHhCCc-----------ccceEEEEeCCCCCceeEEEee
Q 034203 8 FL--MWLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 8 ~l--~fpvl~D~~~~vA~~yga~-----------~tP~~fliD~~G~~~v~~~Y~G 50 (101)
++ +||++.|++++++++||+. .+|++|||| +| +++|+.
T Consensus 93 ~~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid-~G----~i~~~~ 143 (162)
T 1tp9_A 93 PENKHVKFLADGSATYTHALGLELDLQEKGLGTRSRRFALLVD-DL----KVKAAN 143 (162)
T ss_dssp TTCSSEEEEECTTSHHHHHTTCEEEETTTTSEEEECCEEEEEE-TT----EEEEEE
T ss_pred CCCCCeEEEECCCchHHHHcCcccccccCCCCccceeEEEEEE-CC----EEEEEE
Confidence 46 8999999999999999987 389999999 99 466654
No 78
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.15 E-value=8.6e-07 Score=61.38 Aligned_cols=60 Identities=15% Similarity=0.070 Sum_probs=41.5
Q ss_pred ccceeEEE--eChhHHH------------HHhCCcccc---eEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHH
Q 034203 8 FLMWLITL--FQSQDVA------------RDFGAACTP---EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRL 70 (101)
Q Consensus 8 ~l~fpvl~--D~~~~vA------------~~yga~~tP---~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~ 70 (101)
+++||++. |.++..+ ..||...+| ++||||++|+ |+.+|.|..+ ...+++
T Consensus 110 ~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~--i~~~~~g~~~-----------~~~l~~ 176 (187)
T 3dwv_A 110 KAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGV--PVERFSPGAS-----------VKDIEE 176 (187)
T ss_dssp CCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSC--EEEEECTTCC-----------HHHHHH
T ss_pred CCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCC--EEEEECCCCC-----------HHHHHH
Confidence 78899996 6666655 233556677 9999999997 5556666532 568999
Q ss_pred HHHHHHcCCC
Q 034203 71 AIECVLSGQP 80 (101)
Q Consensus 71 AI~alLag~~ 80 (101)
.|+++|++.+
T Consensus 177 ~i~~lL~~~~ 186 (187)
T 3dwv_A 177 KLIPLLGSAR 186 (187)
T ss_dssp HHHHHC----
T ss_pred HHHHHHhcCC
Confidence 9999998764
No 79
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.09 E-value=4.4e-06 Score=58.89 Aligned_cols=40 Identities=13% Similarity=-0.011 Sum_probs=32.2
Q ss_pred ccc--eeEEEeChhHHHHHhCCcc-----------cceEEEEeCCCCCceeEEEee
Q 034203 8 FLM--WLITLFQSQDVARDFGAAC-----------TPEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 8 ~l~--fpvl~D~~~~vA~~yga~~-----------tP~~fliD~~G~~~v~~~Y~G 50 (101)
+++ ||++.|++++++++||+.. .|.+|||| +|+ |+.++.|
T Consensus 114 ~~~~~fp~l~D~~~~va~~yGv~~~~~~~g~g~~~~r~tfiId-dG~--I~~~~~~ 166 (184)
T 3uma_A 114 GGMGKIHFLSDWNAAFTKAIGMEIDLSAGTLGIRSKRYSMLVE-DGV--VKALNIE 166 (184)
T ss_dssp TCTTTSEEEECTTCHHHHHTTCEEEEGGGTCEEEECCEEEEEE-TTE--EEEEEEC
T ss_pred CCCCceEEEEcCchHHHHHcCCceeccccCCcccceeEEEEEC-CCE--EEEEEEe
Confidence 567 9999999999999999863 48899997 995 4444444
No 80
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.06 E-value=5.3e-06 Score=54.16 Aligned_cols=40 Identities=10% Similarity=0.184 Sum_probs=34.9
Q ss_pred ccceeEEEeChhH--HHHHhCCcccceEEEEeCCCCCceeEEEeec
Q 034203 8 FLMWLITLFQSQD--VARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 8 ~l~fpvl~D~~~~--vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
.++||.+.|.++. +++.|++..+|++||||++| ++++++.
T Consensus 90 ~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~~ 131 (142)
T 3eur_A 90 AKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNK----TVLLKDA 131 (142)
T ss_dssp CTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTC----BEEEEEE
T ss_pred ccccccccCccchhhhhhhcCCCcCCeEEEECCCC----cEEecCC
Confidence 4689999999886 79999999999999999999 4777664
No 81
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.06 E-value=1.5e-05 Score=51.16 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=44.8
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
.|.+.+++++||+..+|+++++|++|+ +..+|.|..+ ...+.+.|+.++...+..
T Consensus 68 ~d~~~~~~~~~~v~~~Pt~~~~~~~G~--~~~~~~G~~~-----------~~~l~~~l~~~~~~~~~~ 122 (126)
T 2l57_A 68 EEKNIDLAYKYDANIVPTTVFLDKEGN--KFYVHQGLMR-----------KNNIETILNSLGVKEGHH 122 (126)
T ss_dssp SSHHHHHHHHTTCCSSSEEEEECTTCC--EEEEEESCCC-----------HHHHHHHHHHHCCCCCCC
T ss_pred CCchHHHHHHcCCcceeEEEEECCCCC--EEEEecCCCC-----------HHHHHHHHHHHhcccccc
Confidence 567889999999999999999999997 4556777643 568999999988776544
No 82
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.06 E-value=4.7e-06 Score=54.47 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=33.1
Q ss_pred ccce-eEEEeCh---hHHHHHhCCcccceEEEEeCCCCCceeEEEee
Q 034203 8 FLMW-LITLFQS---QDVARDFGAACTPEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 8 ~l~f-pvl~D~~---~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G 50 (101)
+++| +++.|.. ++++++||+..+|++||||++| ++++++
T Consensus 88 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G----~i~~~~ 130 (143)
T 4fo5_A 88 KLDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEG----VIIAAN 130 (143)
T ss_dssp TCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTS----BEEEES
T ss_pred CCCCceeeecccccchHHHHHcCCCCCCcEEEECCCC----EEEEcc
Confidence 5778 8888874 6899999999999999999999 466654
No 83
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.03 E-value=1.3e-05 Score=55.24 Aligned_cols=38 Identities=5% Similarity=-0.090 Sum_probs=33.0
Q ss_pred ccc--eeEEEeChhHHHHHhCCccc-----------ceEEEEeCCCCCceeEEEee
Q 034203 8 FLM--WLITLFQSQDVARDFGAACT-----------PEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 8 ~l~--fpvl~D~~~~vA~~yga~~t-----------P~~fliD~~G~~~v~~~Y~G 50 (101)
+++ ||++.|++++++++||+..+ |++||| ++| +++|+.
T Consensus 89 ~~~~~fp~l~D~~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI-~~G----~I~~~~ 139 (167)
T 2wfc_A 89 GADDKVQMLADPGGAFTKAVDMELDLSAVLGNVRSKRYSLVI-EDG----VVTKVN 139 (167)
T ss_dssp TCTTTSEEEECTTSHHHHHTTCEECCHHHHSSCEECCEEEEE-ETT----EEEEEE
T ss_pred CCCcceEEEECCCCcHHHHcCCccccccccCcccceEEEEEE-eCC----EEEEEE
Confidence 567 99999999999999999865 999999 999 466664
No 84
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.00 E-value=3.4e-06 Score=58.35 Aligned_cols=60 Identities=18% Similarity=0.111 Sum_probs=45.3
Q ss_pred cccceeEEE--eChhHHHH---------HhCCcccc------eEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHH
Q 034203 7 LFLMWLITL--FQSQDVAR---------DFGAACTP------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIR 69 (101)
Q Consensus 7 ~~l~fpvl~--D~~~~vA~---------~yga~~tP------~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~ 69 (101)
.+++||++. |.++.+++ .||+..+| ++||||++|+ ++.+|.|..+ ...++
T Consensus 111 ~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~ 177 (190)
T 2vup_A 111 FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGV--PVERFSPGAS-----------VKDIE 177 (190)
T ss_dssp HCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSC--EEEEECTTCC-----------HHHHH
T ss_pred cCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCc--EEEEECCCCC-----------HHHHH
Confidence 367899997 66666532 35888999 9999999997 5555666543 46899
Q ss_pred HHHHHHHcCC
Q 034203 70 LAIECVLSGQ 79 (101)
Q Consensus 70 ~AI~alLag~ 79 (101)
+.|+++|+..
T Consensus 178 ~~i~~ll~~~ 187 (190)
T 2vup_A 178 KKLIPLLEST 187 (190)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHhhc
Confidence 9999999754
No 85
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.00 E-value=2.4e-06 Score=56.88 Aligned_cols=58 Identities=19% Similarity=0.128 Sum_probs=43.2
Q ss_pred ccceeEE--EeChhHHHH---------HhCC--cccc---eEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHH
Q 034203 8 FLMWLIT--LFQSQDVAR---------DFGA--ACTP---EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLA 71 (101)
Q Consensus 8 ~l~fpvl--~D~~~~vA~---------~yga--~~tP---~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~A 71 (101)
+++||++ .|.++.+++ .+|+ ..+| ++||||++|+ ++.+|.|..+ ...+++.
T Consensus 96 ~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~ 162 (170)
T 2p5q_A 96 KSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQ--VVDRYYPTTS-----------PLSLERD 162 (170)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSC--EEEEECTTSC-----------GGGGHHH
T ss_pred CCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCC--EEEeeCCCCC-----------HHHHHHH
Confidence 6789999 688776642 2466 7788 9999999997 5566666543 3478899
Q ss_pred HHHHHcC
Q 034203 72 IECVLSG 78 (101)
Q Consensus 72 I~alLag 78 (101)
|+++|+.
T Consensus 163 i~~ll~~ 169 (170)
T 2p5q_A 163 IKQLLEI 169 (170)
T ss_dssp HHHHTTC
T ss_pred HHHHhhc
Confidence 9988864
No 86
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.96 E-value=3.6e-06 Score=56.96 Aligned_cols=58 Identities=19% Similarity=0.138 Sum_probs=43.0
Q ss_pred ccceeEEEeCh--hHH---------HHHhCCcccc------eEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHH
Q 034203 8 FLMWLITLFQS--QDV---------ARDFGAACTP------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRL 70 (101)
Q Consensus 8 ~l~fpvl~D~~--~~v---------A~~yga~~tP------~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~ 70 (101)
+++||++.|.+ +.. .+.||+..+| ++||||++|+ ++.+|.|..+ ...+++
T Consensus 95 ~~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~~ 161 (171)
T 3cmi_A 95 GVTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGK--VYERYSSLTK-----------PSSLSE 161 (171)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSC--EEEEECTTSC-----------GGGGHH
T ss_pred CCCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCC--EEEEeCCCCC-----------HHHHHH
Confidence 67899998643 332 2468899999 9999999997 5566666543 347889
Q ss_pred HHHHHHcC
Q 034203 71 AIECVLSG 78 (101)
Q Consensus 71 AI~alLag 78 (101)
.|+++|+.
T Consensus 162 ~i~~ll~~ 169 (171)
T 3cmi_A 162 TIEELLKE 169 (171)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHh
Confidence 99998864
No 87
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.94 E-value=1.1e-05 Score=55.60 Aligned_cols=39 Identities=5% Similarity=-0.160 Sum_probs=31.2
Q ss_pred cceeEEEeChhHHHHHhCCcc-----------cceEEEEeCCCCCceeEEEee
Q 034203 9 LMWLITLFQSQDVARDFGAAC-----------TPEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 9 l~fpvl~D~~~~vA~~yga~~-----------tP~~fliD~~G~~~v~~~Y~G 50 (101)
++||++.|++++++++||+.. .|.+|+|| +|+ |+.++.|
T Consensus 104 ~~fp~l~D~~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~-~G~--I~~~~~~ 153 (171)
T 2pwj_A 104 DAIEFYGDFDGSFHKSLELTTDLSAGLLGIRSERWSAYVV-DGK--VKALNVE 153 (171)
T ss_dssp TTSEEEECTTCHHHHHHTCEEECTTTTCCEEECCEEEEEE-TTE--EEEEEEC
T ss_pred CceEEEECCccHHHHHhCCccccccccCCcccceeEEEEE-CCE--EEEEEee
Confidence 479999999999999999864 56899999 994 3333444
No 88
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.93 E-value=4e-05 Score=50.08 Aligned_cols=57 Identities=18% Similarity=0.311 Sum_probs=46.2
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~ 83 (101)
|=.|...+++++|++..+|+.+++|++|+ .++|.|..+ ...+++.|++++....+..
T Consensus 76 vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~---~~~~~G~~~-----------~~~l~~~l~~~~~~~~~~~ 132 (136)
T 2l5l_A 76 VDTEKEQELAGAFGIRSIPSILFIPMEGK---PEMAQGAMP-----------KASFKKAIDEFLLKKEGHH 132 (136)
T ss_dssp EETTTCHHHHHHTTCCSSCEEEEECSSSC---CEEEESCCC-----------HHHHHHHHHHHHTSCTTSS
T ss_pred EeCCCCHHHHHHcCCCCCCEEEEECCCCc---EEEEeCCCC-----------HHHHHHHHHHHhhccCCCC
Confidence 33467788999999999999999999997 457888653 5789999999988765543
No 89
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.92 E-value=2.5e-05 Score=52.48 Aligned_cols=51 Identities=14% Similarity=0.206 Sum_probs=40.0
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|.++++++.|++..+|+++|||++|+ +..++ |.... +...+.+.|+.+++.
T Consensus 103 ~~~~~l~~~~~v~~~Pt~~~~d~~G~--~~~~~-G~~~~---------~~~~l~~~l~~~l~~ 153 (154)
T 2ju5_A 103 QKNQELKAQYKVTGFPELVFIDAEGK--QLARM-GFEPG---------GGAAYVSKVKSALKL 153 (154)
T ss_dssp HHHHHHHHHTTCCSSSEEEEECTTCC--EEEEE-CCCTT---------CHHHHHHHHHHHHTC
T ss_pred hhHHHHHHHcCCCCCCEEEEEcCCCC--EEEEe-cCCCC---------CHHHHHHHHHHHHhc
Confidence 44569999999999999999999997 45555 76411 357888899998864
No 90
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=3.9e-05 Score=49.12 Aligned_cols=52 Identities=10% Similarity=0.273 Sum_probs=42.0
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
....++++||+..+|+.+++|++|+ +..+|.|..+ ...+.+.|+.++.....
T Consensus 74 ~~~~~~~~~~v~~~Pt~~~~d~~G~--~~~~~~G~~~-----------~~~l~~~l~~~~~~~~~ 125 (130)
T 2kuc_A 74 EGVELRKKYGVHAYPTLLFINSSGE--VVYRLVGAED-----------APELLKKVKLGVESEGH 125 (130)
T ss_dssp THHHHHHHTTCCSSCEEEEECTTSC--EEEEEESCCC-----------HHHHHHHHHHHHSCCC-
T ss_pred chHHHHHHcCCCCCCEEEEECCCCc--EEEEecCCCC-----------HHHHHHHHHHHHHhccc
Confidence 5678999999999999999999997 4556777642 56899999999877543
No 91
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.87 E-value=2.9e-05 Score=50.50 Aligned_cols=53 Identities=23% Similarity=0.400 Sum_probs=43.8
Q ss_pred eEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 12 LITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 12 pvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.|-.|...++++.||+..+|+.+++|++|+ ..+|.|..+ ...+++.|+.+|+.
T Consensus 88 ~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~---~~~~~G~~~-----------~~~l~~~l~~~l~k 140 (141)
T 3hxs_A 88 KVNVDKEPELARDFGIQSIPTIWFVPMKGE---PQVNMGALS-----------KEQLKGYIDKVLLK 140 (141)
T ss_dssp EEETTTCHHHHHHTTCCSSSEEEEECSSSC---CEEEESCCC-----------HHHHHHHHHHTTC-
T ss_pred EEECCCCHHHHHHcCCCCcCEEEEEeCCCC---EEEEeCCCC-----------HHHHHHHHHHHHcc
Confidence 455678889999999999999999999997 458888753 57899999988764
No 92
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.86 E-value=2.4e-05 Score=56.03 Aligned_cols=41 Identities=10% Similarity=0.007 Sum_probs=32.8
Q ss_pred ccc-eeEEEeChhHHHHHhCCc-----------ccceEEEEeCCCCCceeEEEeec
Q 034203 8 FLM-WLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 8 ~l~-fpvl~D~~~~vA~~yga~-----------~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
+++ ||++.|++++++++||+. ..|++||| ++|+ |+.++.|.
T Consensus 91 ~~~~~~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~p~t~li-~~G~--i~~~~~~~ 143 (241)
T 1nm3_A 91 KSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLV-KNGV--VEKMFIEP 143 (241)
T ss_dssp TCTTSEEEECTTSHHHHHTTCEEECTTTTCCEEECCEEEEE-ETTE--EEEEEECC
T ss_pred CCCceEEEECCCcHHHHHhCceeecccccCcccceeEEEEE-ECCE--EEEEEEec
Confidence 465 999999999999999987 35899999 9995 44444444
No 93
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.86 E-value=7.1e-06 Score=58.38 Aligned_cols=38 Identities=37% Similarity=0.376 Sum_probs=29.5
Q ss_pred CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 27 AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 27 a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+..+|++||||++|+ |+.+|.|..+ ...|++.|+++|+
T Consensus 170 i~~~p~tflID~~G~--i~~~~~g~~~-----------~~~l~~~I~~ll~ 207 (208)
T 2f8a_A 170 VAWNFEKFLVGPDGV--PLRRYSRRFQ-----------TIDIEPDIEALLS 207 (208)
T ss_dssp CCSTTCEEEECTTSC--EEEEECTTSC-----------GGGGHHHHHHHHC
T ss_pred cccCceEEEEcCCCc--EEEEeCCCCC-----------HHHHHHHHHHHhh
Confidence 445699999999997 6677777653 2468889998885
No 94
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=97.84 E-value=2.5e-06 Score=58.63 Aligned_cols=58 Identities=12% Similarity=0.126 Sum_probs=42.1
Q ss_pred cccceeEEE--eChhHHHH---HhCCcccc-------eEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 7 LFLMWLITL--FQSQDVAR---DFGAACTP-------EFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 7 ~~l~fpvl~--D~~~~vA~---~yga~~tP-------~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
.+++||++. |.++..+. .|++..+| ++||||++|+ |+.+|.|..+ ...|++.|++
T Consensus 112 ~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~--i~~~~~g~~~-----------~~~l~~~i~~ 178 (181)
T 2p31_A 112 YSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGK--VVGAWDPTVS-----------VEEVRPQITA 178 (181)
T ss_dssp HCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSC--EEEEECTTSC-----------HHHHHHHHHT
T ss_pred cCCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCC--EEEEeCCCCC-----------HHHHHHHHHH
Confidence 468899995 55555433 45678899 9999999997 5556666532 4688899988
Q ss_pred HHc
Q 034203 75 VLS 77 (101)
Q Consensus 75 lLa 77 (101)
+|.
T Consensus 179 ll~ 181 (181)
T 2p31_A 179 LVR 181 (181)
T ss_dssp TCC
T ss_pred HhC
Confidence 763
No 95
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.76 E-value=6.2e-06 Score=56.80 Aligned_cols=57 Identities=16% Similarity=0.064 Sum_probs=38.6
Q ss_pred cccceeEEE--eChhHHHH-Hh----------CCc-----ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHH
Q 034203 7 LFLMWLITL--FQSQDVAR-DF----------GAA-----CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDI 68 (101)
Q Consensus 7 ~~l~fpvl~--D~~~~vA~-~y----------ga~-----~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L 68 (101)
.+++||++. |.++..+. .| |+. .+|++||||++|+ ++.+|.|..+ ...+
T Consensus 111 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l 177 (185)
T 2gs3_A 111 YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGC--VVKRYGPMEE-----------PLVI 177 (185)
T ss_dssp TTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSC--EEEEECTTSC-----------GGGG
T ss_pred cCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCC--EEEeeCCCCC-----------HHHH
Confidence 367899997 66665443 33 433 3699999999997 6666777543 2467
Q ss_pred HHHHHHHH
Q 034203 69 RLAIECVL 76 (101)
Q Consensus 69 ~~AI~alL 76 (101)
++.|+++|
T Consensus 178 ~~~i~~lL 185 (185)
T 2gs3_A 178 EKDLPHYF 185 (185)
T ss_dssp GGGHHHHC
T ss_pred HHHHHHhC
Confidence 77777664
No 96
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.74 E-value=5.8e-06 Score=56.61 Aligned_cols=57 Identities=16% Similarity=0.069 Sum_probs=39.0
Q ss_pred cccceeEEE--eChhHHHH-Hh----------CC-----cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHH
Q 034203 7 LFLMWLITL--FQSQDVAR-DF----------GA-----ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDI 68 (101)
Q Consensus 7 ~~l~fpvl~--D~~~~vA~-~y----------ga-----~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L 68 (101)
.+++||++. |.++..++ .| |+ ..+|++||||++|+ ++.+|.|..+ ...|
T Consensus 109 ~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~--i~~~~~g~~~-----------~~~l 175 (183)
T 2obi_A 109 YNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGC--VVKRYGPMEE-----------PLVI 175 (183)
T ss_dssp TTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSC--EEEEECTTSC-----------THHH
T ss_pred cCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCC--EEEEeCCCCC-----------HHHH
Confidence 367899997 77776553 34 53 34699999999997 6666667543 2467
Q ss_pred HHHHHHHH
Q 034203 69 RLAIECVL 76 (101)
Q Consensus 69 ~~AI~alL 76 (101)
++.|+++|
T Consensus 176 ~~~i~~lL 183 (183)
T 2obi_A 176 EKDLPHYF 183 (183)
T ss_dssp HTTSGGGC
T ss_pred HHHHHHhC
Confidence 77666553
No 97
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.72 E-value=9.3e-05 Score=50.43 Aligned_cols=54 Identities=4% Similarity=-0.100 Sum_probs=41.5
Q ss_pred ChhHHHHHhCC---------cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 17 QSQDVARDFGA---------ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 17 ~~~~vA~~yga---------~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
..++++++||+ ..+|++||||++|+ |+.+|.|. +. +..++.++|++++...++.
T Consensus 105 ~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~--i~~~~~g~-~~---------~~~~i~~~l~~~~~~~~~~ 167 (170)
T 3me7_A 105 DLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQ--IKDYIYGV-NY---------NYLEFVNALRLARGEGHHH 167 (170)
T ss_dssp HHHHHHHHTTCCCEEETTEEECCCEEEEECTTSB--EEEEEESS-SC---------CHHHHHHHHHHHTTCSCTT
T ss_pred HHHHHHHHCCeEEecCCCccccCceEEEECCCCe--EEEEEeCC-CC---------CHHHHHHHHHHhhcccccc
Confidence 56789999874 46789999999997 55567665 21 3689999999998876654
No 98
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=97.61 E-value=0.00012 Score=47.11 Aligned_cols=54 Identities=11% Similarity=0.296 Sum_probs=40.6
Q ss_pred eChhHHHHHhCC---cccceEEEEeCCCCCceeEEEee-cCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 16 FQSQDVARDFGA---ACTPEFFLFKKDGRRPFQLVYHG-QFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 16 D~~~~vA~~yga---~~tP~~fliD~~G~~~v~~~Y~G-~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
|...++++.|++ ..+|+++++|++|+ +..++.| .+... ...+...+++.|+.+.
T Consensus 75 ~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~--~~~~~~g~~~~~~-----~~~~~~~l~~~l~~l~ 132 (133)
T 3fk8_A 75 DRNLELSQAYGDPIQDGIPAVVVVNSDGK--VRYTTKGGELANA-----RKMSDQGIYDFFAKIT 132 (133)
T ss_dssp TSSHHHHHHTTCGGGGCSSEEEEECTTSC--EEEECCSCTTTTG-----GGSCHHHHHHHHHHHH
T ss_pred cchHHHHHHhCCccCCccceEEEECCCCC--EEEEecCCccccc-----ccCCHHHHHHHHHHhc
Confidence 778999999999 99999999999996 3444445 44332 1235778888888775
No 99
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.61 E-value=0.00012 Score=51.10 Aligned_cols=44 Identities=16% Similarity=0.238 Sum_probs=30.7
Q ss_pred ccceeEEE---eChhHHHHHhCCc-cc---------------ceEEEEeCCCCCceeEEEeecCC
Q 034203 8 FLMWLITL---FQSQDVARDFGAA-CT---------------PEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 8 ~l~fpvl~---D~~~~vA~~yga~-~t---------------P~~fliD~~G~~~v~~~Y~G~id 53 (101)
+++|+.+. |..+.++++||+. .. |++||||++|+ |+.+|.|.++
T Consensus 104 ~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~--i~~~~~g~~~ 166 (200)
T 2b7k_A 104 HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQ--FVDALGRNYD 166 (200)
T ss_dssp CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSC--EEEEECTTCC
T ss_pred CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCc--EEEEeCCCCC
Confidence 35677775 4568899999987 34 48899999997 5556666543
No 100
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.57 E-value=0.00016 Score=44.60 Aligned_cols=49 Identities=20% Similarity=0.396 Sum_probs=38.6
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|.+.+++++||+..+|+.+++ ++|+ +..++.|..+ ...+++.|+++|+
T Consensus 60 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~ 108 (108)
T 2trx_A 60 IDQNPGTAPKYGIRGIPTLLLF-KNGE--VAATKVGALS-----------KGQLKEFLDANLA 108 (108)
T ss_dssp TTTCTTHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC
T ss_pred CCCCHHHHHHcCCcccCEEEEE-eCCE--EEEEEecCCC-----------HHHHHHHHHHhhC
Confidence 4677889999999999999999 7885 4455677642 5688898888774
No 101
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.57 E-value=0.00017 Score=44.63 Aligned_cols=52 Identities=10% Similarity=0.159 Sum_probs=40.0
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
+=.|.+.+++++|++..+|+.+++ ++|+ +..+|.|..+ ...+++.|++++.+
T Consensus 63 v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~g~~~-----------~~~l~~~l~~~l~~ 114 (115)
T 1thx_A 63 LEIDPNPTTVKKYKVEGVPALRLV-KGEQ--ILDSTEGVIS-----------KDKLLSFLDTHLNN 114 (115)
T ss_dssp EESTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC-
T ss_pred EEcCCCHHHHHHcCCCceeEEEEE-cCCE--EEEEecCCCC-----------HHHHHHHHHHHhcC
Confidence 334677889999999999999999 8895 3445666632 57899999998864
No 102
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.55 E-value=0.00018 Score=51.79 Aligned_cols=36 Identities=19% Similarity=0.163 Sum_probs=28.4
Q ss_pred cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 30 TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 30 tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.|++||||++|+ |+.+|.|..+ ...+++.|++||+.
T Consensus 177 npttfLID~~G~--vv~~~~g~~~-----------~~~l~~~I~~ll~~ 212 (215)
T 2i3y_A 177 NFEKFLVGPDGI--PVMRWSHRAT-----------VSSVKTDILAYLKQ 212 (215)
T ss_dssp TTCEEEECTTSC--EEEEECTTSC-----------HHHHHHHHHHHGGG
T ss_pred CceEEEECCCCe--EEEEeCCCCC-----------HHHHHHHHHHHHHH
Confidence 389999999997 6666766532 46899999999874
No 103
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.55 E-value=8.4e-05 Score=50.21 Aligned_cols=54 Identities=17% Similarity=0.297 Sum_probs=39.3
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
|=.|...+++++||+..+|+++++ ++|+ +.-+|.|..+ ...|++.|+.+++...
T Consensus 75 Vd~d~~~~la~~~~V~~iPT~~~f-k~G~--~v~~~~G~~~-----------~~~l~~~i~~~l~~~~ 128 (142)
T 2es7_A 75 ADLEQSEAIGDRFNVRRFPATLVF-TDGK--LRGALSGIHP-----------WAELLTLMRSIVDTPA 128 (142)
T ss_dssp ECHHHHHHHHHTTTCCSSSEEEEE-SCC------CEESCCC-----------HHHHHHHHHHHHC---
T ss_pred EECCCCHHHHHhcCCCcCCeEEEE-eCCE--EEEEEeCCCC-----------HHHHHHHHHHHhcccc
Confidence 445678899999999999999999 8896 4456777643 5689999999987654
No 104
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.52 E-value=0.0001 Score=52.57 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=28.0
Q ss_pred cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 30 TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 30 tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.|++||||++|+ |+.+|.|.++ ...+++.|+++|+.
T Consensus 159 ~~ttflID~~G~--i~~~~~g~~~-----------~~~l~~~I~~ll~~ 194 (207)
T 2r37_A 159 NFEKFLVGPDGI--PIMRWHHRTT-----------VSNVKMDILSYMRR 194 (207)
T ss_dssp TTCEEEECTTSC--EEEEECTTSC-----------HHHHHHHHHHHHHH
T ss_pred cceEEEECCCCc--EEEEECCCCC-----------HHHHHHHHHHHHhh
Confidence 389999999997 6666766532 46899999998864
No 105
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.50 E-value=0.00027 Score=43.43 Aligned_cols=49 Identities=24% Similarity=0.349 Sum_probs=37.7
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|.+.+++++||+..+|+.+++ ++|+ +..++.|..+ ...+++.|+++|+
T Consensus 59 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~ 107 (107)
T 1dby_A 59 TDESPNVASEYGIRSIPTIMVF-KGGK--KCETIIGAVP-----------KATIVQTVEKYLN 107 (107)
T ss_dssp TTTCHHHHHHHTCCSSCEEEEE-SSSS--EEEEEESCCC-----------HHHHHHHHHHHCC
T ss_pred CCCCHHHHHHCCCCcCCEEEEE-eCCE--EEEEEeCCCC-----------HHHHHHHHHHHhC
Confidence 4677899999999999997777 7886 4556777643 4688888888763
No 106
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.47 E-value=0.00031 Score=42.34 Aligned_cols=49 Identities=24% Similarity=0.392 Sum_probs=38.8
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|.+.+++++|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+++|.
T Consensus 55 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~l~ 103 (104)
T 2e0q_A 55 SDENPDIAARYGVMSLPTVIFF-KDGE--PVDEIIGAVP-----------REEIEIRIKNLLG 103 (104)
T ss_dssp TTTCHHHHHHTTCCSSCEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHT
T ss_pred CCCCHHHHHhCCccccCEEEEE-ECCe--EhhhccCCCC-----------HHHHHHHHHHHhc
Confidence 4677889999999999999999 7885 4446777642 5688888888875
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=97.45 E-value=6.6e-05 Score=49.02 Aligned_cols=46 Identities=13% Similarity=0.229 Sum_probs=35.0
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCcee--EEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQ--LVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~--~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
|...+++++||+..+|+++++|++|+ +. .++.|.++ ...+++.|+.
T Consensus 78 ~~~~~l~~~~~v~~~Pt~~~~d~~G~--~v~~~~~~G~~~-----------~~~l~~~l~~ 125 (134)
T 2fwh_A 78 AQDVALLKHLNVLGLPTILFFDGQGQ--EHPQARVTGFMD-----------AETFSAHLRD 125 (134)
T ss_dssp HHHHHHHHHTTCCSSSEEEEECTTSC--BCGGGCBCSCCC-----------HHHHHHHHHH
T ss_pred chHHHHHHHcCCCCCCEEEEECCCCC--EeeeeeeeeccC-----------HHHHHHHHHh
Confidence 45788999999999999999999996 22 25666643 4567776664
No 108
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=97.44 E-value=0.0003 Score=45.55 Aligned_cols=60 Identities=27% Similarity=0.461 Sum_probs=44.5
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
.+.|- |=.|...+++++||+..+|+.+++ ++|+ +..++.|. + ...+++.|++++.+.+++
T Consensus 77 ~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~~~~~~~~ 137 (139)
T 3d22_A 77 SLMFLVIDVDELSDFSASWEIKATPTFFFL-RDGQ--QVDKLVGA-N-----------KPELHKKITAILDSLPPS 137 (139)
T ss_dssp TSEEEEEETTTSHHHHHHTTCCEESEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHHHHHTSCTT
T ss_pred CCEEEEEeCcccHHHHHHcCCCcccEEEEE-cCCe--EEEEEeCC-C-----------HHHHHHHHHHHhccCCCC
Confidence 34443 335678899999999999998877 8895 44455665 2 468999999999886554
No 109
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.43 E-value=0.00033 Score=45.61 Aligned_cols=52 Identities=19% Similarity=0.342 Sum_probs=40.8
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
=.|...++++.|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+.+|+++
T Consensus 89 d~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~i~~~l~~~ 140 (140)
T 1v98_A 89 NVDEHPGLAARYGVRSVPTLVLF-RRGA--PVATWVGASP-----------RRVLEERLRPYLEGR 140 (140)
T ss_dssp ETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHTCC
T ss_pred ECCCCHHHHHHCCCCccCEEEEE-eCCc--EEEEEeCCCC-----------HHHHHHHHHHHHccC
Confidence 34567889999999999999999 6885 4455777642 578999999999874
No 110
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.43 E-value=0.00025 Score=43.37 Aligned_cols=50 Identities=16% Similarity=0.329 Sum_probs=39.6
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
+=.|...++++.|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+.+|
T Consensus 59 v~~~~~~~~~~~~~i~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~l 108 (109)
T 3tco_A 59 LNVDENQKIADKYSVLNIPTTLIF-VNGQ--LVDSLVGAVD-----------EDTLESTVNKYL 108 (109)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHC
T ss_pred EccccCHHHHHhcCcccCCEEEEE-cCCc--EEEeeeccCC-----------HHHHHHHHHHHh
Confidence 445788899999999999999999 8885 4556777643 568888888776
No 111
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.40 E-value=0.00029 Score=44.89 Aligned_cols=52 Identities=23% Similarity=0.270 Sum_probs=40.9
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
.|...+++++|++..+|+.+++++ |+ ...+|.|..+ ...+.+.|+.++....
T Consensus 69 ~~~~~~l~~~~~v~~~Pt~~~~~~-g~--~~~~~~G~~~-----------~~~l~~~l~~~~~~~~ 120 (133)
T 1x5d_A 69 ATVNQVLASRYGIRGFPTIKIFQK-GE--SPVDYDGGRT-----------RSDIVSRALDLFSDNA 120 (133)
T ss_dssp TTTCCHHHHHHTCCSSSEEEEEET-TE--EEEEECSCCS-----------HHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHhCCCCeeCeEEEEeC-CC--ceEEecCCCC-----------HHHHHHHHHHHhhccC
Confidence 356778999999999999999998 74 4566777643 5688888888887643
No 112
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.39 E-value=0.00014 Score=44.61 Aligned_cols=48 Identities=23% Similarity=0.355 Sum_probs=36.5
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.|.+.+++++||+..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+++|
T Consensus 57 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 104 (105)
T 1nsw_A 57 VDENPETTSQFGIMSIPTLILF-KGGR--PVKQLIGYQP-----------KEQLEAQLADVL 104 (105)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHTTTTT
T ss_pred CcCCHHHHHHcCCccccEEEEE-eCCe--EEEEEecCCC-----------HHHHHHHHHHHh
Confidence 4677899999999999999999 7885 3445777642 457777776654
No 113
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.38 E-value=0.00035 Score=43.35 Aligned_cols=51 Identities=14% Similarity=0.270 Sum_probs=38.5
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+=.|.+.+++++||+..+|+.+++ ++|+ +..++.|..+ ...+.+.|+++|+
T Consensus 61 v~~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~ 111 (112)
T 1t00_A 61 LNIDENPGTAAKYGVMSIPTLNVY-QGGE--VAKTIVGAKP-----------KAAIVRDLEDFIA 111 (112)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHTHHHHC
T ss_pred EEcCCCHHHHHhCCCCcccEEEEE-eCCE--EEEEEeCCCC-----------HHHHHHHHHHHhh
Confidence 334677899999999999997766 7885 3445677642 5688888888875
No 114
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=97.38 E-value=5.6e-05 Score=49.19 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=30.2
Q ss_pred cceeEEE-eChhHHHHHhCCcccceEEEEe-CCCCCceeEEEee
Q 034203 9 LMWLITL-FQSQDVARDFGAACTPEFFLFK-KDGRRPFQLVYHG 50 (101)
Q Consensus 9 l~fpvl~-D~~~~vA~~yga~~tP~~fliD-~~G~~~v~~~Y~G 50 (101)
+.||++. |..++++++||+..+|++|||| ++|+ ++++.
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~----i~~~~ 126 (144)
T 1i5g_A 87 LALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGN----IITTQ 126 (144)
T ss_dssp EECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCC----EEESC
T ss_pred cccccCchHHHHHHHHHcCCCCCCEEEEEECCCCc----EEecc
Confidence 3455555 6678999999999999999999 9995 55543
No 115
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.35 E-value=0.00046 Score=43.81 Aligned_cols=48 Identities=15% Similarity=0.302 Sum_probs=37.7
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.|.+.+++++|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+++|
T Consensus 71 ~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 118 (119)
T 1w4v_A 71 IDDHTDLAIEYEVSAVPTVLAM-KNGD--VVDKFVGIKD-----------EDQLEAFLKKLI 118 (119)
T ss_dssp TTTTHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCCcccEEEEE-eCCc--EEEEEcCCCC-----------HHHHHHHHHHHh
Confidence 4677889999999999999999 7885 3445667643 567888888876
No 116
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=97.31 E-value=0.00073 Score=47.70 Aligned_cols=38 Identities=5% Similarity=-0.201 Sum_probs=31.0
Q ss_pred cc-ceeEEEeChhHHHHHhCCc-----------ccceEEEEeCCCCCceeEEEee
Q 034203 8 FL-MWLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 8 ~l-~fpvl~D~~~~vA~~yga~-----------~tP~~fliD~~G~~~v~~~Y~G 50 (101)
.+ +||+|-|.+++++++||+. ..+.+|||| +| +++|.-
T Consensus 102 ~~~~f~lLsD~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvId-dG----~V~~~~ 151 (182)
T 1xiy_A 102 DIKKIKYISDGNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVE-NN----ILVKMF 151 (182)
T ss_dssp TCCSSEEEECTTSHHHHHTTCEEECGGGTCCEEECCEEEEEE-TT----EEEEEE
T ss_pred CCCCceEEEeCchHHHHHhCCceeccccCCCCceEEEEEEEc-CC----EEEEEE
Confidence 35 6999999999999999974 357899999 99 466554
No 117
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=97.30 E-value=7.3e-05 Score=48.85 Aligned_cols=33 Identities=15% Similarity=0.239 Sum_probs=27.7
Q ss_pred cceeEEE-eChhHHHHHhCCcccceEEEEe-CCCC
Q 034203 9 LMWLITL-FQSQDVARDFGAACTPEFFLFK-KDGR 41 (101)
Q Consensus 9 l~fpvl~-D~~~~vA~~yga~~tP~~fliD-~~G~ 41 (101)
+.||++. |..++++++||+..+|++|||| ++|+
T Consensus 87 ~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~ 121 (146)
T 1o8x_A 87 LAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGD 121 (146)
T ss_dssp EECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCC
T ss_pred eeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCe
Confidence 3455554 6678999999999999999999 9995
No 118
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=97.30 E-value=0.00083 Score=41.72 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=35.0
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
...+++++|++..+|+ |+++++|+ +..++.|. + ...+.+.|++++
T Consensus 66 ~~~~~~~~~~v~~~Pt-~~~~~~G~--~~~~~~G~-~-----------~~~l~~~l~~~~ 110 (111)
T 2pu9_C 66 ENKTLAKELGIRVVPT-FKILKENS--VVGEVTGA-K-----------YDKLLEAIQAAR 110 (111)
T ss_dssp TTHHHHHHHCCSBSSE-EEEESSSS--EEEEEESS-C-----------HHHHHHHHHHHH
T ss_pred chHHHHHHcCCCeeeE-EEEEeCCc--EEEEEcCC-C-----------HHHHHHHHHHhh
Confidence 5689999999999999 77889996 44456665 2 357888888776
No 119
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.30 E-value=0.00081 Score=43.31 Aligned_cols=52 Identities=19% Similarity=0.253 Sum_probs=40.8
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
|...++++.|++..+|+.+++ ++|+ ..+|.|.. +...|.+.|+.++.....+
T Consensus 78 ~~~~~~~~~~~v~~~Pt~~~~-~~G~---~~~~~g~~-----------~~~~l~~~l~~~~~~~~~~ 129 (140)
T 2dj1_A 78 TSASMLASKFDVSGYPTIKIL-KKGQ---AVDYDGSR-----------TQEEIVAKVREVSQPDWTP 129 (140)
T ss_dssp TTCHHHHHHTTCCSSSEEEEE-ETTE---EEECCSCC-----------CHHHHHHHHHHHHSSSCCC
T ss_pred cccHHHHHHCCCCccCeEEEE-ECCc---EEEcCCCC-----------CHHHHHHHHHHhcCCCCCC
Confidence 456789999999999999999 6785 45677654 3578999999998775433
No 120
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.39 E-value=3.7e-05 Score=49.51 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.8
Q ss_pred eeEEEeChhHHHHHhCCcccceEEEEeCCCC
Q 034203 11 WLITLFQSQDVARDFGAACTPEFFLFKKDGR 41 (101)
Q Consensus 11 fpvl~D~~~~vA~~yga~~tP~~fliD~~G~ 41 (101)
+|+..|..++++++||+..+|++||||++|+
T Consensus 90 ~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~ 120 (143)
T 2lus_A 90 IPYRSGPASNVTAKYGITGIPALVIVKKDGT 120 (143)
Confidence 5666778889999999999999999999995
No 121
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.28 E-value=0.00038 Score=42.51 Aligned_cols=47 Identities=13% Similarity=0.294 Sum_probs=36.0
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
.|.+.+++++|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+++
T Consensus 60 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~ 106 (107)
T 2i4a_A 60 IDDNPETPNAYQVRSIPTLMLV-RDGK--VIDKKVGALP-----------KSQLKAWVESA 106 (107)
T ss_dssp TTTCCHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHT
T ss_pred CCCCHHHHHhcCCCccCEEEEE-eCCE--EEEEecCCCC-----------HHHHHHHHHhc
Confidence 3677899999999999999999 8895 3445667642 46777777764
No 122
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.26 E-value=0.00077 Score=41.61 Aligned_cols=49 Identities=18% Similarity=0.235 Sum_probs=36.9
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
=.|...+++++|++..+|+.+++ ++|+ +..+|.|. + ...+++.|+++|+
T Consensus 63 d~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l~ 111 (112)
T 1ep7_A 63 DVDAVAAVAEAAGITAMPTFHVY-KDGV--KADDLVGA-S-----------QDKLKALVAKHAA 111 (112)
T ss_dssp ETTTTHHHHHHHTCCBSSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHHHHC
T ss_pred ECCchHHHHHHcCCCcccEEEEE-ECCe--EEEEEcCC-C-----------HHHHHHHHHHHhc
Confidence 34677899999999999995555 7885 34456665 3 4679999998875
No 123
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=97.26 E-value=0.00017 Score=48.64 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=24.5
Q ss_pred HHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 22 ARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 22 A~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
++.||+..+|++++||++|+ +..++.|..+
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~--~~~~~~G~~~ 152 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGN--PLNKSYAYDE 152 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSC--BSSCCBCSCC
T ss_pred HHHcCCCCcceEEEECCCCC--EEeeccCCCC
Confidence 69999999999999999996 4445666653
No 124
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.24 E-value=0.00038 Score=42.39 Aligned_cols=50 Identities=26% Similarity=0.323 Sum_probs=37.6
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.|.+.++++.|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|++++..
T Consensus 58 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~l~~ 107 (109)
T 2yzu_A 58 VDENPKTAMRYRVMSIPTVILF-KDGQ--PVEVLVGAQP-----------KRNYQAKIEKHLPA 107 (109)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHTTC--
T ss_pred CCCCHhHHHhCCCCcCCEEEEE-eCCc--EeeeEeCCCC-----------HHHHHHHHHHHhhh
Confidence 4677889999999999999999 7885 3445777642 56888888877643
No 125
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.23 E-value=0.00047 Score=43.26 Aligned_cols=52 Identities=17% Similarity=0.263 Sum_probs=38.8
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
=.|.+.+++++||+..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+..+..+
T Consensus 56 d~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~~~~~ 107 (112)
T 2voc_A 56 DVDENQETAGKYGVMSIPTLLVL-KDGE--VVETSVGFKP-----------KEALQELVNKHLLEH 107 (112)
T ss_dssp ETTTCCSHHHHTTCCSBSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHTTSCSC
T ss_pred ECCCCHHHHHHcCCCcccEEEEE-eCCE--EEEEEeCCCC-----------HHHHHHHHHHHHHhh
Confidence 34677899999999999999999 8996 4455777643 457777777655443
No 126
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.20 E-value=0.00029 Score=45.79 Aligned_cols=49 Identities=20% Similarity=0.396 Sum_probs=38.8
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|.+.+++++|++..+|+.+++ ++|+ +..+|.|..+ ...+++.|+++|+
T Consensus 80 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 80 IDQNPGTAPKYGIRGIPTLLLF-KNGE--VAATKVGALS-----------KGQLKEFLDANLA 128 (128)
T ss_dssp TTTCCTTSGGGTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC
T ss_pred CCCCHHHHHHcCCCccCEEEEE-eCCE--EEEEEcCCCC-----------HHHHHHHHHHhhC
Confidence 4677889999999999999999 8895 4455777643 5688999988774
No 127
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.20 E-value=0.0006 Score=43.42 Aligned_cols=52 Identities=19% Similarity=0.219 Sum_probs=39.3
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
=.|...++++.|++..+|+.++++++|+ +..+|.|..+ ...+.+.|...+..
T Consensus 74 d~~~~~~l~~~~~v~~~Pt~~~~~~~~~--~~~~~~G~~~-----------~~~l~~~l~~~l~~ 125 (130)
T 2dml_A 74 NADKHQSLGGQYGVQGFPTIKIFGANKN--KPEDYQGGRT-----------GEAIVDAALSALRS 125 (130)
T ss_dssp ETTTCHHHHHHHTCCSSSEEEEESSCTT--SCEECCSCCS-----------HHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHcCCCccCEEEEEeCCCC--eEEEeecCCC-----------HHHHHHHHHHHHhc
Confidence 3467788999999999999999999885 3566777543 45677777766653
No 128
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.20 E-value=0.00073 Score=45.51 Aligned_cols=51 Identities=20% Similarity=0.186 Sum_probs=39.2
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.|.+.+++++|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+++|..+
T Consensus 104 ~~~~~~l~~~~~i~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~~~ 154 (155)
T 2ppt_A 104 TQAHPAVAGRHRIQGIPAFILF-HKGR--ELARAAGARP-----------ASELVGFVRGKLGAR 154 (155)
T ss_dssp TTTSTHHHHHTTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC--
T ss_pred CCccHHHHHHcCCCcCCEEEEE-eCCe--EEEEecCCCC-----------HHHHHHHHHHHhccC
Confidence 4677899999999999999999 6885 4455777643 568899999888654
No 129
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=96.27 E-value=5.5e-05 Score=48.52 Aligned_cols=56 Identities=16% Similarity=0.211 Sum_probs=41.3
Q ss_pred eChhHHHHHhCCcccceEEEEeC-CCCCce--eEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKK-DGRRPF--QLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSN 84 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~-~G~~~v--~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~~ 84 (101)
|...++++.|++..+|+.+++|+ +|+ + ..++.|..+ ...+.+.|+.++++......
T Consensus 65 ~~~~~~~~~~~v~~~Pt~~~~d~~~G~--~~~~~~~~G~~~-----------~~~l~~~l~~~~~~~~~~~~ 123 (130)
T 2lst_A 65 PEGQELARRYRVPGTPTFVFLVPKAGA--WEEVGRLFGSRP-----------RAEFLKELRQVCVKGGACGE 123 (130)
Confidence 35578999999999999999996 475 3 345777643 34788888888877654443
No 130
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.17 E-value=0.0008 Score=44.15 Aligned_cols=54 Identities=15% Similarity=0.301 Sum_probs=41.7
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
|=.|...++++.|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+.++...+
T Consensus 93 vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~~~~ 146 (148)
T 3p2a_A 93 VNTEAEPALSTRFRIRSIPTIMLY-RNGK--MIDMLNGAVP-----------KAPFDNWLDEQLSRDP 146 (148)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEESSCCC-----------HHHHHHHHHHHHHSCC
T ss_pred EECcCCHHHHHHCCCCccCEEEEE-ECCe--EEEEEeCCCC-----------HHHHHHHHHHHhcccC
Confidence 445788899999999999998888 5785 3455777643 5789999999887643
No 131
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.17 E-value=0.001 Score=40.41 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=37.2
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
+-.|.+.+++++|++..+|+.+++ ++|+ +..++.|..+ ...+.+.|+++|
T Consensus 56 v~~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~G~~~-----------~~~l~~~l~~~l 105 (105)
T 1fb6_A 56 LNTDEAPGIATQYNIRSIPTVLFF-KNGE--RKESIIGAVP-----------KSTLTDSIEKYL 105 (105)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEEECCC-----------HHHHHHHHHHHC
T ss_pred EcCcchHHHHHhCCCCcccEEEEE-eCCe--EEEEEecCCC-----------HHHHHHHHHhhC
Confidence 444677889999999999997766 6885 4455777743 467888888764
No 132
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.16 E-value=0.00059 Score=41.53 Aligned_cols=49 Identities=14% Similarity=0.220 Sum_probs=36.9
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
+=.|.+.++++.|++..+|+.++++ +|+ +..+|.|..+ ...+.+.|+++
T Consensus 57 v~~~~~~~~~~~~~v~~~Pt~~~~~-~G~--~~~~~~g~~~-----------~~~l~~~l~~~ 105 (106)
T 3die_A 57 LDVDENPSTAAKYEVMSIPTLIVFK-DGQ--PVDKVVGFQP-----------KENLAEVLDKH 105 (106)
T ss_dssp EETTTCHHHHHHTTCCSBSEEEEEE-TTE--EEEEEESCCC-----------HHHHHHHHHTT
T ss_pred EECCcCHHHHHhCCCcccCEEEEEe-CCe--EEEEEeCCCC-----------HHHHHHHHHHh
Confidence 4457888999999999999999996 785 4456777632 46777777654
No 133
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.15 E-value=0.001 Score=42.16 Aligned_cols=49 Identities=22% Similarity=0.394 Sum_probs=37.9
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
|=.|...++++.|++..+|+.+++ ++|+ +..+|.|. + ...|++.|+++|
T Consensus 68 vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l 116 (116)
T 3qfa_C 68 VDVDDCQDVASECEVKSMPTFQFF-KKGQ--KVGEFSGA-N-----------KEKLEATINELV 116 (116)
T ss_dssp EETTTTHHHHHHTTCCSSSEEEEE-SSSS--EEEEEESC-C-----------HHHHHHHHHHHC
T ss_pred EECCCCHHHHHHcCCccccEEEEE-eCCe--EEEEEcCC-C-----------HHHHHHHHHHhC
Confidence 445788899999999999998888 7786 45567776 3 467888887764
No 134
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.15 E-value=0.0005 Score=48.72 Aligned_cols=39 Identities=8% Similarity=-0.025 Sum_probs=31.8
Q ss_pred ccc--eeEEEeChhHHHHHhCCc-----------ccceEEEEeCCCCCceeEEEeec
Q 034203 8 FLM--WLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 8 ~l~--fpvl~D~~~~vA~~yga~-----------~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
+++ ||+|.|++++++++||+. ..|.+||| ++|+ ++|.-.
T Consensus 105 ~l~~~f~lLsD~~~~va~ayGv~~~~~~~G~g~~s~R~tfII-~dG~----I~~~~~ 156 (176)
T 4f82_A 105 HTAGKVRMMADGSAAFTHALGLTQDLSARGMGIRSLRYAMVI-DGGV----VKTLAV 156 (176)
T ss_dssp TCTTTSEEEECTTCHHHHHHTCEEECGGGTCCEEECCEEEEE-ETTE----EEEEEE
T ss_pred CCCCCceEEEcCchHHHHHhCCCccccccCCCcccccEEEEE-cCCE----EEEEEE
Confidence 466 999999999999999974 25899999 9994 555543
No 135
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.14 E-value=0.001 Score=40.84 Aligned_cols=51 Identities=20% Similarity=0.426 Sum_probs=39.2
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+=.|....++++|++..+|+.+++ ++|+ ...+|.|..+ ...+.+.|+.++.
T Consensus 60 vd~~~~~~l~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 60 VDVEEEKTLFQRFSLKGVPQILYF-KDGE--YKGKMAGDVE-----------DDEVEQMIADVLE 110 (111)
T ss_dssp EETTTCHHHHHHTTCCSSCEEEEE-ETTE--EEEEEESSCC-----------HHHHHHHHHHHHH
T ss_pred EECCcChhHHHhcCCCcCCEEEEE-ECCE--EEEEEeccCC-----------HHHHHHHHHHHhc
Confidence 445678889999999999999999 5785 3446777643 5688888888764
No 136
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.12 E-value=0.00026 Score=45.86 Aligned_cols=50 Identities=20% Similarity=0.402 Sum_probs=38.6
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
+=.|.+.+++++||+..+|+.+++ ++|+ +..++.|..+ ...+.+.|+++|
T Consensus 73 vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 122 (123)
T 1oaz_A 73 LNIDQNPGTAPKYGIRGIPTLLLF-KNGE--VAATKVGALS-----------KGQLKEFLDANL 122 (123)
T ss_dssp EETTSCTTTGGGGTCCBSSEEEEE-ESSS--EEEEEESCCC-----------HHHHHHHHTTTC
T ss_pred EECCCCHHHHHHcCCCccCEEEEE-ECCE--EEEEEeCCCC-----------HHHHHHHHHHHh
Confidence 445778899999999999999999 8896 4456777643 457777777654
No 137
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=97.12 E-value=0.00016 Score=46.78 Aligned_cols=32 Identities=13% Similarity=0.319 Sum_probs=26.4
Q ss_pred ceeEEE-eChhHHHHHhCCcccceEEEEe-CCCC
Q 034203 10 MWLITL-FQSQDVARDFGAACTPEFFLFK-KDGR 41 (101)
Q Consensus 10 ~fpvl~-D~~~~vA~~yga~~tP~~fliD-~~G~ 41 (101)
.+|++. |..++++++||+..+|++|||| ++|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~ 121 (144)
T 1o73_A 88 ALPFDQRSTVSELGKTFGVESIPTLITINADTGA 121 (144)
T ss_dssp ECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCC
T ss_pred EeeccchhHHHHHHHHcCCCCCCEEEEEECCCCe
Confidence 344443 5678999999999999999999 8995
No 138
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=97.11 E-value=0.00015 Score=49.07 Aligned_cols=38 Identities=11% Similarity=0.170 Sum_probs=28.8
Q ss_pred ceeEEEeCh-hHHHHHhCCcccceEEEEeCC-CCCceeEEEeec
Q 034203 10 MWLITLFQS-QDVARDFGAACTPEFFLFKKD-GRRPFQLVYHGQ 51 (101)
Q Consensus 10 ~fpvl~D~~-~~vA~~yga~~tP~~fliD~~-G~~~v~~~Y~G~ 51 (101)
.||+..|.. ++++++||+..+|++||||++ |+ ++++..
T Consensus 108 ~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~----iv~~~~ 147 (165)
T 3s9f_A 108 SIPFANRNIVEALTKKYSVESIPTLIGLNADTGD----TVTTRA 147 (165)
T ss_dssp ECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCC----EEESCH
T ss_pred ccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCE----EEeccc
Confidence 344444433 899999999999999999998 94 555543
No 139
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.04 E-value=0.00093 Score=41.89 Aligned_cols=49 Identities=14% Similarity=0.400 Sum_probs=37.1
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|...+++++||+..+|+.+++ ++|+ +..++.|..+ ...|+..|+..+.
T Consensus 58 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~v~~~~G~~~-----------~~~l~~~~~~~~~ 106 (110)
T 2l6c_A 58 SEARPELMKELGFERVPTLVFI-RDGK--VAKVFSGIMN-----------PRELQALYASIHH 106 (110)
T ss_dssp GGGCHHHHHHTTCCSSCEEEEE-ESSS--EEEEEESCCC-----------HHHHHHHHHTC--
T ss_pred CcCCHHHHHHcCCcccCEEEEE-ECCE--EEEEEcCCCC-----------HHHHHHHHHHHhh
Confidence 4677899999999999999999 7896 5567778754 4577777776543
No 140
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.00 E-value=0.0017 Score=40.59 Aligned_cols=56 Identities=23% Similarity=0.294 Sum_probs=40.8
Q ss_pred hcccce-eEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 6 YLFLMW-LITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 6 ~~~l~f-pvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
|..+.| .+-.|...++++.|++..+|+.++++ +|+ +..++.|. + ...+++.|+++|
T Consensus 53 ~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~-~G~--~~~~~~G~-~-----------~~~l~~~i~~~l 109 (109)
T 3f3q_A 53 YPQADFYKLDVDELGDVAQKNEVSAMPTLLLFK-NGK--EVAKVVGA-N-----------PAAIKQAIAANA 109 (109)
T ss_dssp CTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEE-TTE--EEEEEESS-C-----------HHHHHHHHHHHC
T ss_pred CCCCEEEEEECCCCHHHHHHcCCCccCEEEEEE-CCE--EEEEEeCC-C-----------HHHHHHHHHhhC
Confidence 334443 34467888999999999999999998 785 45566666 2 357888887764
No 141
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=96.99 E-value=0.0014 Score=39.91 Aligned_cols=49 Identities=22% Similarity=0.380 Sum_probs=36.7
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
+=.|...++++.|++..+|+.+++ ++|+ ...+|.|. + ...+++.|+++|
T Consensus 57 vd~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~-~-----------~~~l~~~l~~~l 105 (105)
T 3m9j_A 57 VDVDDCQDVASESEVKSMPTFQFF-KKGQ--KVGEFSGA-N-----------KEKLEATINELV 105 (105)
T ss_dssp EETTTCHHHHHHTTCCBSSEEEEE-ETTE--EEEEEESS-C-----------HHHHHHHHHHHC
T ss_pred EEhhhhHHHHHHcCCCcCcEEEEE-ECCe--EEEEEeCC-C-----------HHHHHHHHHHhC
Confidence 334677899999999999999999 6675 34456665 3 467888887764
No 142
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=96.99 E-value=0.002 Score=42.74 Aligned_cols=59 Identities=12% Similarity=0.251 Sum_probs=43.2
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.+.|- |=.|...++++.|++..+|+.++++ +|+ +..++.|. + ...+.+.|+.++.....
T Consensus 63 ~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~-~G~--~~~~~~G~-~-----------~~~l~~~i~~~l~~~~~ 122 (153)
T 2wz9_A 63 QVSFVKLEAEGVPEVSEKYEISSVPTFLFFK-NSQ--KIDRLDGA-H-----------APELTKKVQRHASSGSF 122 (153)
T ss_dssp TSEEEEEETTTSHHHHHHTTCCSSSEEEEEE-TTE--EEEEEESS-C-----------HHHHHHHHHHHSCTTSS
T ss_pred CeEEEEEECCCCHHHHHHcCCCCCCEEEEEE-CCE--EEEEEeCC-C-----------HHHHHHHHHHHhccccC
Confidence 44443 3346778899999999999999999 885 34455663 2 35799999999887543
No 143
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=96.99 E-value=0.0011 Score=45.45 Aligned_cols=53 Identities=23% Similarity=0.328 Sum_probs=40.0
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
|=.|++.++|.+||++..||.+++ ++|+ ..-+..|..+ ...+.+.|+++|+..
T Consensus 75 VdvDe~~~lA~~ygV~sIPTlilF-k~G~--~v~~~~G~~~-----------k~~l~~~i~~~l~~~ 127 (140)
T 2qgv_A 75 ADLEQSEAIGDRFGAFRFPATLVF-TGGN--YRGVLNGIHP-----------WAELINLMRGLVEPQ 127 (140)
T ss_dssp CCHHHHHHHHHHHTCCSSSEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHHC--
T ss_pred EECCCCHHHHHHcCCccCCEEEEE-ECCE--EEEEEecCCC-----------HHHHHHHHHHHhcCC
Confidence 345789999999999999999888 5785 4445666532 568999999998543
No 144
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.98 E-value=0.0013 Score=42.26 Aligned_cols=49 Identities=20% Similarity=0.344 Sum_probs=36.0
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
=.|...+++++|++..+|+.+++ ++|+ +..++.|. + ...+++.|+++|+
T Consensus 76 d~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 76 DTDELKSVASDWAIQAMPTFMFL-KEGK--ILDKVVGA-K-----------KDELQSTIAKHLA 124 (124)
T ss_dssp ETTTSHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHHHCC
T ss_pred ECccCHHHHHHcCCCccCEEEEE-ECCE--EEEEEeCC-C-----------HHHHHHHHHHhcC
Confidence 34677899999999999997666 7885 34456663 2 4678888888763
No 145
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=96.97 E-value=0.00043 Score=47.10 Aligned_cols=63 Identities=14% Similarity=0.065 Sum_probs=37.3
Q ss_pred cccceeEEEe--Chh---HHHHHhCC---cccce----EEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 7 LFLMWLITLF--QSQ---DVARDFGA---ACTPE----FFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 7 ~~l~fpvl~D--~~~---~vA~~yga---~~tP~----~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
.+++||++.| ..+ .....|.. ..+|+ +||||++|+ ++.+|.|..+... -...++..|++
T Consensus 101 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~--i~~~~~g~~~~~~-------l~~~i~~lL~~ 171 (180)
T 3kij_A 101 YGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQ--VVKFWRPEEPIEV-------IRPDIAALVRQ 171 (180)
T ss_dssp HCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSC--EEEEECTTCCGGG-------THHHHHHHHHH
T ss_pred cCCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCC--EEEEECCCCCHHH-------HHHHHHHHHHH
Confidence 3678888652 222 22222222 24788 999999997 6666777754321 14566777766
Q ss_pred HHcC
Q 034203 75 VLSG 78 (101)
Q Consensus 75 lLag 78 (101)
+++.
T Consensus 172 ~~~~ 175 (180)
T 3kij_A 172 VIIK 175 (180)
T ss_dssp HHHH
T ss_pred Hhcc
Confidence 6653
No 146
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.97 E-value=0.0015 Score=41.57 Aligned_cols=50 Identities=22% Similarity=0.381 Sum_probs=37.6
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+=.|...++++.|++..+|+.++++ +|+ +..++.|. + ...+++.|+++|+
T Consensus 72 vd~d~~~~~~~~~~v~~~Pt~~~~~-~G~--~~~~~~G~-~-----------~~~l~~~l~~~l~ 121 (121)
T 2j23_A 72 VDVDEQSQIAQEVGIRAMPTFVFFK-NGQ--KIDTVVGA-D-----------PSKLQAAITQHSA 121 (121)
T ss_dssp EETTTCHHHHHHHTCCSSSEEEEEE-TTE--EEEEEESS-C-----------HHHHHHHHHHHTC
T ss_pred EECcCCHHHHHHcCCCcccEEEEEE-CCe--EEeeEcCC-C-----------HHHHHHHHHHhhC
Confidence 3356778999999999999988884 785 34456665 2 4688888888764
No 147
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.96 E-value=0.001 Score=43.40 Aligned_cols=52 Identities=12% Similarity=0.140 Sum_probs=37.9
Q ss_pred EeChhHHHHHhCCcccceEEEE-eCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 15 LFQSQDVARDFGAACTPEFFLF-KKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fli-D~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.|...+++++||+..+|+++++ |++|++.+..++.|. + ...|++.|++++..
T Consensus 78 ~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~-----------~~~l~~~l~~~l~~ 130 (133)
T 3cxg_A 78 VDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA-N-----------QNDIEKAFQKYCLE 130 (133)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-C-----------HHHHHHHHHHHSEE
T ss_pred ccchHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-C-----------HHHHHHHHHHHHHh
Confidence 4677889999999999999999 556631123445554 2 46899999988764
No 148
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=96.89 E-value=0.0019 Score=40.56 Aligned_cols=49 Identities=14% Similarity=0.316 Sum_probs=37.1
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.|...+++++||+..+|+.+++ ++|+ +..+|.|.. ...+++.|+.++..
T Consensus 73 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~------------~~~l~~~l~~~l~~ 121 (122)
T 2vlu_A 73 VDELKPIAEQFSVEAMPTFLFM-KEGD--VKDRVVGAI------------KEELTAKVGLHAAA 121 (122)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESSC------------HHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHcCCCcccEEEEE-eCCE--EEEEEeCcC------------HHHHHHHHHHHhcc
Confidence 4677899999999999996666 7885 344566653 35888999988865
No 149
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.88 E-value=0.0015 Score=42.48 Aligned_cols=51 Identities=16% Similarity=0.128 Sum_probs=37.0
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
|...+++++||+..+|+.++++ +|+ +..++.|..+ ...++..|+.++.+..
T Consensus 79 d~~~~l~~~~~v~~~Pt~~~~~-~G~--~v~~~~G~~~-----------~~~~~~~i~~~~~~~~ 129 (135)
T 3emx_A 79 SAARLEMNKAGVEGTPTLVFYK-EGR--IVDKLVGATP-----------WSLKVEKAREIYGGEG 129 (135)
T ss_dssp HHHHHHHHHHTCCSSSEEEEEE-TTE--EEEEEESCCC-----------HHHHHHHHHHHC----
T ss_pred hhhHHHHHHcCCceeCeEEEEc-CCE--EEEEEeCCCC-----------HHHHHHHHHHHhCCCc
Confidence 6788999999999999666666 886 5566777743 5678888888887643
No 150
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=96.86 E-value=0.0017 Score=39.44 Aligned_cols=48 Identities=17% Similarity=0.388 Sum_probs=34.1
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
=.|...++++.|++..+|+.+++ ++|+ +..++.| .+ ...+++.|+++|
T Consensus 59 ~~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~g-~~-----------~~~l~~~i~~~l 106 (106)
T 1xwb_A 59 DVDECEDIAMEYNISSMPTFVFL-KNGV--KVEEFAG-AN-----------AKRLEDVIKANI 106 (106)
T ss_dssp ETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEES-CC-----------HHHHHHHHHHTC
T ss_pred eccchHHHHHHcCCCcccEEEEE-cCCc--EEEEEcC-CC-----------HHHHHHHHHHhC
Confidence 34677889999999999996555 6785 3445666 32 356888877653
No 151
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.86 E-value=0.0019 Score=39.78 Aligned_cols=48 Identities=19% Similarity=0.309 Sum_probs=35.9
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|...+++++||+..+|+.+++ ++|+ +..++.| .+ ...+.+.|++++.
T Consensus 65 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~g-~~-----------~~~l~~~l~~~~~ 112 (113)
T 1ti3_A 65 VDELKAVAEEWNVEAMPTFIFL-KDGK--LVDKTVG-AD-----------KDGLPTLVAKHAT 112 (113)
T ss_dssp TTTCHHHHHHHHCSSTTEEEEE-ETTE--EEEEEEC-CC-----------TTHHHHHHHHHHH
T ss_pred ccccHHHHHhCCCCcccEEEEE-eCCE--EEEEEec-CC-----------HHHHHHHHHHhhc
Confidence 4677899999999999998888 6785 3445666 33 2378888888774
No 152
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.86 E-value=0.0022 Score=40.49 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=33.3
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
...+++++||+..+|+ |+++++|+ +..++.|. + ...+.+.|++++
T Consensus 79 ~~~~~~~~~~v~~~Pt-~~~~~~G~--~~~~~~G~-~-----------~~~l~~~i~~~~ 123 (124)
T 1faa_A 79 ENKTLAKELGIRVVPT-FKILKENS--VVGEVTGA-K-----------YDKLLEAIQAAR 123 (124)
T ss_dssp TTHHHHHHHCCSSSSE-EEEEETTE--EEEEEESS-C-----------HHHHHHHHHHHT
T ss_pred chHHHHHHcCCCeeeE-EEEEeCCc--EEEEEcCC-C-----------HHHHHHHHHHhh
Confidence 5688999999999998 66678895 34455654 1 357888888765
No 153
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.84 E-value=0.00089 Score=42.57 Aligned_cols=50 Identities=20% Similarity=0.196 Sum_probs=39.3
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.|...+++++|++..+|+.+++ ++|+ ..+|.|.. +...+.+.|+.++...
T Consensus 63 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~---~~~~~G~~-----------~~~~l~~~l~~~~~~~ 112 (126)
T 1x5e_A 63 VTEQPGLSGRFIINALPTIYHC-KDGE---FRRYQGPR-----------TKKDFINFISDKEWKS 112 (126)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE---EEECCSCC-----------CHHHHHHHHHTCGGGG
T ss_pred CcCCHHHHHHcCCcccCEEEEE-eCCe---EEEeecCC-----------CHHHHHHHHHHHhhcc
Confidence 5678889999999999999999 7885 35666653 3568888888877543
No 154
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=96.83 E-value=0.0017 Score=40.00 Aligned_cols=50 Identities=20% Similarity=0.252 Sum_probs=29.9
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
|=.|...+++++|++..+|+.++++ +|+ +..++.|..+ ...+.+.|++++
T Consensus 55 vd~~~~~~l~~~~~v~~~Pt~~~~~-~G~--~~~~~~g~~~-----------~~~l~~~l~~~~ 104 (105)
T 4euy_A 55 ILLQDMQEIAGRYAVFTGPTVLLFY-NGK--EILRESRFIS-----------LENLERTIQLFE 104 (105)
T ss_dssp EEECCC---------CCCCEEEEEE-TTE--EEEEEESSCC-----------HHHHHHHHHTTC
T ss_pred EECCCCHHHHHhcCCCCCCEEEEEe-CCe--EEEEEeCCcC-----------HHHHHHHHHHhh
Confidence 4467888999999999999999995 785 4456677643 567888887654
No 155
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=96.83 E-value=0.0027 Score=38.39 Aligned_cols=47 Identities=21% Similarity=0.363 Sum_probs=34.2
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.|...++++.|++..+|+.++++ +|+ +..++.| .+ ...+++.|+++|
T Consensus 58 ~~~~~~~~~~~~v~~~Pt~~~~~-~g~--~~~~~~G-~~-----------~~~l~~~l~~~l 104 (104)
T 2vim_A 58 VDQNEEAAAKYSVTAMPTFVFIK-DGK--EVDRFSG-AN-----------ETKLRETITRHK 104 (104)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEE-TTE--EEEEEES-SC-----------HHHHHHHHHHHC
T ss_pred ccCCHHHHHHcCCccccEEEEEe-CCc--EEEEEeC-CC-----------HHHHHHHHHhhC
Confidence 45677899999999999977665 785 3445666 32 357888887764
No 156
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=96.81 E-value=0.00087 Score=41.92 Aligned_cols=52 Identities=21% Similarity=0.317 Sum_probs=37.3
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
+=.|...+++++|++..+|+.++++ +|+ +..+|.|..+ ...+.+.|++++++
T Consensus 68 v~~~~~~~~~~~~~i~~~Pt~~~~~-~g~--~~~~~~G~~~-----------~~~l~~~l~~~l~~ 119 (121)
T 2i1u_A 68 LDVDTNPETARNFQVVSIPTLILFK-DGQ--PVKRIVGAKG-----------KAALLRELSDVVPN 119 (121)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEEE-TTE--EEEEEESCCC-----------HHHHHHHTCSCCCC
T ss_pred EECCCCHHHHHhcCCCcCCEEEEEE-CCE--EEEEecCCCC-----------HHHHHHHHHHHHhh
Confidence 3346778999999999999988875 785 3455677642 45777777766544
No 157
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.81 E-value=0.0031 Score=39.03 Aligned_cols=56 Identities=23% Similarity=0.372 Sum_probs=39.2
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.+.|- +=.|...++++.|++..+|+.+++ ++|+ +..++.|. + ...+.+.|+++++.
T Consensus 59 ~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~-~-----------~~~l~~~l~~~~~~ 115 (118)
T 2vm1_A 59 GAIFLKVDVDELKDVAEAYNVEAMPTFLFI-KDGE--KVDSVVGG-R-----------KDDIHTKIVALMGS 115 (118)
T ss_dssp TSEEEEEETTTSHHHHHHTTCCSBSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHHHHC-
T ss_pred CcEEEEEEcccCHHHHHHcCCCcCcEEEEE-eCCe--EEEEecCC-C-----------HHHHHHHHHHHhcc
Confidence 34432 334677889999999999997777 6885 33445552 2 46889999988864
No 158
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=96.79 E-value=0.0024 Score=39.98 Aligned_cols=47 Identities=17% Similarity=0.238 Sum_probs=34.2
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.|...+++++||+..+|+.+++ ++|+ +..++.|. + ...+++.|+++|
T Consensus 71 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l 117 (117)
T 2xc2_A 71 VDKLEETARKYNISAMPTFIAI-KNGE--KVGDVVGA-S-----------IAKVEDMIKKFI 117 (117)
T ss_dssp TTTSHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESS-C-----------HHHHHHHHHHHC
T ss_pred CCccHHHHHHcCCCccceEEEE-eCCc--EEEEEeCC-C-----------HHHHHHHHHHhC
Confidence 3567889999999999996666 7885 34456662 2 357888887764
No 159
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=96.79 E-value=0.0028 Score=40.98 Aligned_cols=51 Identities=10% Similarity=0.199 Sum_probs=37.8
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|=.|...+++++|++..+|+.+++ ++|+ +..+|.| .+ ...+.+.|++++..
T Consensus 74 vd~d~~~~l~~~~~v~~~Pt~~i~-~~G~--~~~~~~G-~~-----------~~~l~~~l~~~l~~ 124 (125)
T 1r26_A 74 VDADNNSEIVSKCRVLQLPTFIIA-RSGK--MLGHVIG-AN-----------PGMLRQKLRDIIKD 124 (125)
T ss_dssp EETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEEES-SC-----------HHHHHHHHHHHHHC
T ss_pred EECCCCHHHHHHcCCCcccEEEEE-eCCe--EEEEEeC-CC-----------HHHHHHHHHHHhcC
Confidence 335677889999999999996666 7885 3445667 32 35789999888753
No 160
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=96.77 E-value=0.0032 Score=42.90 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=28.4
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
..+|++||||++|+ |+-+|.|..+. ....+.+.|++||+
T Consensus 132 ~H~~~~~liD~~G~--i~~~~~g~~~~---------~~~~l~~~ik~Lle 170 (170)
T 4hde_A 132 IHGTSFYLIDQNGK--VMKKYSGISNT---------PYEDIIRDMKRLAE 170 (170)
T ss_dssp BCCCEEEEECTTSC--EEEEEESSSSC---------CHHHHHHHHHHHHC
T ss_pred EeeeEEEEEcCCCe--EEEEECCCCCC---------CHHHHHHHHHHHhC
Confidence 34789999999997 66668875321 24678888888874
No 161
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=96.77 E-value=0.0025 Score=41.59 Aligned_cols=52 Identities=25% Similarity=0.289 Sum_probs=38.7
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|=.|...++++.|++..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+.++..
T Consensus 62 vd~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~~ 113 (140)
T 3hz4_A 62 INIATNPWTAEKYGVQGTPTFKFF-CHGR--PVWEQVGQIY-----------PSILKNAVRDMLQH 113 (140)
T ss_dssp EETTTCHHHHHHHTCCEESEEEEE-ETTE--EEEEEESSCC-----------HHHHHHHHHHHHHH
T ss_pred EECCcCHhHHHHCCCCcCCEEEEE-eCCc--EEEEEcCCCC-----------HHHHHHHHHHHhcc
Confidence 334788899999999999987777 6785 3456777643 46777777777753
No 162
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=96.77 E-value=0.0016 Score=40.58 Aligned_cols=55 Identities=15% Similarity=0.268 Sum_probs=37.2
Q ss_pred ccccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 7 LFLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 7 ~~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
..+.|- |=.|...+++++|++..+|+.+++ ++|+ +..++.|. + ...+++.|+++|
T Consensus 56 ~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l 111 (112)
T 1syr_A 56 TKMVFIKVDVDEVSEVTEKENITSMPTFKVY-KNGS--SVDTLLGA-N-----------DSALKQLIEKYA 111 (112)
T ss_dssp TTSEEEEEETTTTHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHTTC
T ss_pred CCCEEEEEECCCCHHHHHHcCCCcccEEEEE-ECCc--EEEEEeCC-C-----------HHHHHHHHHHhh
Confidence 344443 334567789999999999986555 6885 34456665 3 467888887765
No 163
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.76 E-value=0.0012 Score=38.74 Aligned_cols=44 Identities=16% Similarity=0.315 Sum_probs=34.7
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.|.+.+++++||+..+|+.++ +|+ . ++.|..+ ...+++.|+++|
T Consensus 41 ~~~~~~~~~~~~v~~~Pt~~~---~G~---~-~~~G~~~-----------~~~l~~~l~~~l 84 (85)
T 1nho_A 41 IMVDREKAIEYGLMAVPAIAI---NGV---V-RFVGAPS-----------REELFEAINDEM 84 (85)
T ss_dssp TTTCGGGGGGTCSSCSSEEEE---TTT---E-EEECSSC-----------CHHHHHHHHHHC
T ss_pred CCCCHHHHHhCCceeeCEEEE---CCE---E-EEccCCC-----------HHHHHHHHHHHh
Confidence 456778999999999999998 785 3 8888643 357888888765
No 164
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=96.71 E-value=0.0033 Score=42.94 Aligned_cols=52 Identities=17% Similarity=0.159 Sum_probs=40.0
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|=.|++.++|++||++.+||.+++ ++|+ ..-+..|..+ ...+.+.|+++|+.
T Consensus 73 VdvDe~~~la~~ygV~siPTlilF-kdG~--~v~~~vG~~~-----------k~~l~~~l~~~l~~ 124 (137)
T 2qsi_A 73 VAAEAERGLMARFGVAVCPSLAVV-QPER--TLGVIAKIQD-----------WSSYLAQIGAMLAE 124 (137)
T ss_dssp ECGGGHHHHHHHHTCCSSSEEEEE-ECCE--EEEEEESCCC-----------HHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCccCCEEEEE-ECCE--EEEEEeCCCC-----------HHHHHHHHHHHhcc
Confidence 446889999999999999999999 5785 4455666643 56888888888743
No 165
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=96.71 E-value=0.0035 Score=43.67 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=42.3
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
.|...++++.|++..+|+.+++ ++|+ +..+|.|.. +...+.+.|+.++......
T Consensus 154 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~-----------~~~~l~~~i~~~l~~~~~~ 207 (210)
T 3apq_A 154 CGDDRMLCRMKGVNSYPSLFIF-RSGM--AAVKYNGDR-----------SKESLVAFAMQHVRSTVTE 207 (210)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-CTTS--CCEECCSCC-----------CHHHHHHHHHHHHHCCSSC
T ss_pred CCccHHHHHHcCCCcCCeEEEE-ECCC--ceeEecCCC-----------CHHHHHHHHHHhCccccee
Confidence 4677889999999999999999 8886 456677753 3578999999998765443
No 166
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=96.67 E-value=0.0018 Score=40.74 Aligned_cols=55 Identities=11% Similarity=0.052 Sum_probs=41.8
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.|...+++++|++..+|+.+++++.|+ ..++.|.... ..+...+.+.|+++++.-
T Consensus 61 ~~~~~~~~~~~~v~~~Pt~~~~~~~~~---~~~~~g~~~~-------~~~~~~l~~~l~~~l~~~ 115 (122)
T 3aps_A 61 CQAYPQTCQKAGIKAYPSVKLYQYERA---KKSIWEEQIN-------SRDAKTIAALIYGKLETL 115 (122)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEEEEGG---GTEEEEEEEC-------CSCHHHHHHHHHHHHHCC
T ss_pred CcCCHHHHHHcCCCccceEEEEeCCCc---cceeeccccC-------cCCHHHHHHHHHHHHHhh
Confidence 457788999999999999999998885 4667776110 113678999999988753
No 167
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=96.67 E-value=0.0028 Score=44.38 Aligned_cols=37 Identities=11% Similarity=0.091 Sum_probs=30.9
Q ss_pred ceeEEEeChhHHHHHhCCc-----------ccceEEEEeCCCCCceeEEEeec
Q 034203 10 MWLITLFQSQDVARDFGAA-----------CTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 10 ~fpvl~D~~~~vA~~yga~-----------~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
+||+|-|++++++++||+. ....+|||| +| +++|.-.
T Consensus 103 ~f~lLSD~~~~~a~ayGv~~~~~~~g~g~~~~R~tfvId-dG----~V~~~~v 150 (171)
T 2xhf_A 103 KIRMLADMHGEFTRALGTELDSSKMLGNNRSRRYAMLID-DN----KIRSVST 150 (171)
T ss_dssp CSEEEECTTSHHHHHHTCBCCCHHHHSSCCBCCEEEEEE-TT----EEEEEEE
T ss_pred CeEEEEeCCchHHHHhCCceeccccCCCcceEEEEEEEe-CC----EEEEEEE
Confidence 8999999999999999974 346789999 99 5666653
No 168
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.0034 Score=38.78 Aligned_cols=55 Identities=16% Similarity=0.284 Sum_probs=38.3
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.+.|- +=.|...++++.||+..+|+.+++ ++|+ +.-++.|. + ...+++.|+++++
T Consensus 54 ~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 54 NVSFLSIDADENSEISELFEISAVPYFIII-HKGT--ILKELSGA-D-----------PKEYVSLLEDCKN 109 (112)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEECSC-C-----------HHHHHHHHHHHHH
T ss_pred CEEEEEEecccCHHHHHHcCCCcccEEEEE-ECCE--EEEEecCC-C-----------HHHHHHHHHHHHh
Confidence 34443 334677889999999999998888 6885 33445564 2 2358888888775
No 169
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=96.64 E-value=0.0044 Score=38.04 Aligned_cols=47 Identities=26% Similarity=0.323 Sum_probs=35.1
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.|...++++.|++..+|+.+++ ++|+ ...++.|. + ...+++.|++++
T Consensus 60 ~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~-~-----------~~~l~~~l~~~l 106 (107)
T 1gh2_A 60 VHQCQGTAATNNISATPTFQFF-RNKV--RIDQYQGA-D-----------AVGLEEKIKQHL 106 (107)
T ss_dssp TTTSHHHHHHTTCCSSSEEEEE-ETTE--EEEEEESS-C-----------HHHHHHHHHHHH
T ss_pred CccCHHHHHhcCCCcccEEEEE-ECCe--EEEEEeCC-C-----------HHHHHHHHHHhc
Confidence 4677889999999999998888 6785 34557774 2 234888888765
No 170
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=96.60 E-value=0.0042 Score=39.45 Aligned_cols=45 Identities=24% Similarity=0.404 Sum_probs=33.1
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
.|...+++++||++.+||.+++ ++|+ ..-++.|+ + ...|++.|+.
T Consensus 59 ~d~~~~l~~~~~V~~~PT~~~~-~~G~--~v~~~~G~-~-----------~~~l~~~i~k 103 (105)
T 3zzx_A 59 VDECEDIAQDNQIACMPTFLFM-KNGQ--KLDSLSGA-N-----------YDKLLELVEK 103 (105)
T ss_dssp TTTCHHHHHHTTCCBSSEEEEE-ETTE--EEEEEESC-C-----------HHHHHHHHHH
T ss_pred cccCHHHHHHcCCCeecEEEEE-ECCE--EEEEEeCc-C-----------HHHHHHHHHh
Confidence 4678899999999999987666 6886 44566674 2 3567776664
No 171
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.60 E-value=0.00034 Score=42.29 Aligned_cols=48 Identities=19% Similarity=0.332 Sum_probs=34.5
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
=.|.+.++++.||+..+|+.+++ ++|+ +..+|.|..+ ...+.+.|+++
T Consensus 58 ~~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~~ 105 (106)
T 2yj7_A 58 NVDENPNTAAQYGIRSIPTLLLF-KNGQ--VVDRLVGAQP-----------KEALKERIDKH 105 (106)
Confidence 35677889999999999999999 7885 3455677643 23566666554
No 172
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=96.52 E-value=0.0027 Score=40.66 Aligned_cols=37 Identities=19% Similarity=0.301 Sum_probs=29.3
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~i 52 (101)
|=.|...+++++|++..+|+.+++ ++|+ +..++.|..
T Consensus 80 vd~d~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~ 116 (128)
T 3ul3_B 80 VDLDKNESLARKFSVKSLPTIILL-KNKT--MLARKDHFV 116 (128)
T ss_dssp EEGGGCHHHHHHTTCCSSSEEEEE-ETTE--EEEEESSCC
T ss_pred EECCCCHHHHHHcCCCCcCEEEEE-ECCE--EEEEecCCC
Confidence 445778899999999999999999 6785 445566654
No 173
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=96.42 E-value=0.002 Score=39.74 Aligned_cols=48 Identities=19% Similarity=0.278 Sum_probs=35.2
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCcee--EEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQ--LVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~--~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
|...+++++|++..+|+.+++ ++|+ .. .+|.|.. +...+.+.|+.++.
T Consensus 68 ~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~~~g~~-----------~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 68 TEESDLAQQYGVRGYPTIKFF-RNGD--TASPKEYTAGR-----------EADDIVNWLKKRTG 117 (120)
T ss_dssp TTCCSSHHHHTCCSSSEEEEE-ESSC--SSSCEECCCCS-----------SHHHHHHHHHTTSC
T ss_pred CCCHHHHHHCCCCcccEEEEE-eCCC--cCCcccccCcc-----------CHHHHHHHHHhccC
Confidence 345689999999999999999 5675 23 5666653 25678888777654
No 174
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.35 E-value=0.0045 Score=43.60 Aligned_cols=57 Identities=21% Similarity=0.424 Sum_probs=44.0
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSS 83 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~ 83 (101)
|=.|...+++++|++..+|+.++++ +|+ +..+|.|..+ ...+.+.|+.+++++....
T Consensus 68 vd~d~~~~l~~~~~v~~~Pt~~~~~-~G~--~~~~~~G~~~-----------~~~l~~~l~~~l~~~~~~s 124 (222)
T 3dxb_A 68 LNIDQNPGTAPKYGIRGIPTLLLFK-NGE--VAATKVGALS-----------KGQLKEFLDANLAGSAMES 124 (222)
T ss_dssp EETTTCTTTGGGGTCCSBSEEEEEE-TTE--EEEEEESCCC-----------HHHHHHHHHHHSCCSCCBC
T ss_pred EECCCCHHHHHHcCCCcCCEEEEEE-CCe--EEEEeccccC-----------hHHHHHHHHhhcccccccc
Confidence 3446778899999999999988886 685 4557787643 5799999999998765443
No 175
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=96.33 E-value=0.0079 Score=36.62 Aligned_cols=46 Identities=13% Similarity=0.223 Sum_probs=33.4
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
.|...++++.|++..+|+.+++ ++|+ ...+|.|..+ ...+.+.|++
T Consensus 64 ~~~~~~l~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~~~-----------~~~l~~~l~~ 109 (111)
T 3uvt_A 64 CTAERNICSKYSVRGYPTLLLF-RGGK--KVSEHSGGRD-----------LDSLHRFVLS 109 (111)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-ETTE--EEEEECSCCS-----------HHHHHHHHHH
T ss_pred ccccHhHHHhcCCCcccEEEEE-eCCc--EEEeccCCcC-----------HHHHHHHHHh
Confidence 4567789999999999998877 6775 3456777643 4566666654
No 176
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.26 E-value=0.0017 Score=38.03 Aligned_cols=44 Identities=18% Similarity=0.367 Sum_probs=33.5
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.|.+.+++++||+..+|+.++ +|+ .++.|..+ ...+++.|+++|
T Consensus 42 ~~~~~~~~~~~~v~~~Pt~~~---~G~----~~~~G~~~-----------~~~l~~~l~~~l 85 (85)
T 1fo5_A 42 VMENPQKAMEYGIMAVPTIVI---NGD----VEFIGAPT-----------KEALVEAIKKRL 85 (85)
T ss_dssp SSSSCCTTTSTTTCCSSEEEE---TTE----EECCSSSS-----------SHHHHHHHHHHC
T ss_pred CCCCHHHHHHCCCcccCEEEE---CCE----EeeecCCC-----------HHHHHHHHHHhC
Confidence 457778999999999999988 784 47777643 357888877653
No 177
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.11 E-value=0.0021 Score=40.56 Aligned_cols=52 Identities=19% Similarity=0.293 Sum_probs=37.3
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
.|...+++++|++..+|+.+++ ++|+ +..++.|. + ...+++.|+++++..+.
T Consensus 75 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~g~-~-----------~~~l~~~l~~~~~~~~~ 126 (130)
T 1wmj_A 75 VDELKEVAEKYNVEAMPTFLFI-KDGA--EADKVVGA-R-----------KDDLQNTIVKHVGATAA 126 (130)
T ss_dssp TTTSGGGHHHHTCCSSCCCCBC-TTTT--CCBCCCTT-C-----------TTTHHHHHHHHTSSSCS
T ss_pred ccchHHHHHHcCCCccceEEEE-eCCe--EEEEEeCC-C-----------HHHHHHHHHHHHhccCC
Confidence 3667899999999999997776 7886 33344442 2 24788889888876543
No 178
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=96.11 E-value=0.011 Score=40.93 Aligned_cols=49 Identities=10% Similarity=0.255 Sum_probs=36.8
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
=.|...++++.||+..+|+.+++ ++|+ ...+|.|..+ ...+.+.|++++
T Consensus 177 d~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~~~-----------~~~l~~~l~~~l 225 (226)
T 1a8l_A 177 EAIEYPEWADQYNVMAVPKIVIQ-VNGE--DRVEFEGAYP-----------EKMFLEKLLSAL 225 (226)
T ss_dssp EGGGCHHHHHHTTCCSSCEEEEE-ETTE--EEEEEESCCC-----------HHHHHHHHHHHH
T ss_pred EcccCHHHHHhCCCcccCeEEEE-eCCc--eeEEEcCCCC-----------HHHHHHHHHHhh
Confidence 34567889999999999997666 5785 4567888743 457888887766
No 179
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.08 E-value=0.0084 Score=39.99 Aligned_cols=62 Identities=21% Similarity=0.189 Sum_probs=39.5
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|=.|...++++.|++..+|+++ ++++|+ +.....|.-++.+. .+...+...+.+.|+.++.|
T Consensus 61 vd~d~~~~l~~~~~v~~~Pt~~-~~~~G~--~v~~~~g~~~~~~~-~G~~~~~~~l~~~l~~~~~~ 122 (149)
T 3gix_A 61 VDVDQTAVYTQYFDISYIPSTV-FFFNGQ--HMKVDYGSPDHTKF-VGSFKTKQDFIDLIEVIYRG 122 (149)
T ss_dssp EETTTCCHHHHHTTCCSSSEEE-EEETTE--EEEEECSSSCCSCE-ESCCSSHHHHHHHHHHHHHH
T ss_pred EECCcCHHHHHHcCCCccCeEE-EEECCe--EEEeecCCCCCCeE-eeecCCHHHHHHHHHHHHHH
Confidence 4458889999999999999999 667885 23223333222111 11123567888888887654
No 180
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=96.07 E-value=0.011 Score=37.58 Aligned_cols=47 Identities=13% Similarity=0.042 Sum_probs=35.0
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCcee-EEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQ-LVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~-~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
.|...+++++|++..+|+.+++++.++ +. ..|.|..+ ...|.+.|++
T Consensus 78 ~~~~~~l~~~~~v~~~Pt~~~~~~g~~--~~~~~~~G~~~-----------~~~l~~~i~~ 125 (127)
T 3h79_A 78 GEKYPDVIERMRVSGFPTMRYYTRIDK--QEPFEYSGQRY-----------LSLVDSFVFQ 125 (127)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEECSSCS--SSCEECCSCCC-----------HHHHHHHHHH
T ss_pred ccccHhHHHhcCCccCCEEEEEeCCCC--CCceEecCCcc-----------HHHHHHHHHh
Confidence 356778999999999999999998764 12 56777632 4667766654
No 181
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=95.94 E-value=0.022 Score=39.45 Aligned_cols=50 Identities=20% Similarity=0.282 Sum_probs=39.2
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.|...+++++||+..+|+.+++++ |+ .+.|.|..+ ...+.+.|+.++...
T Consensus 75 ~~~~~~l~~~~~v~~~Pt~~~~~~-g~---~~~~~g~~~-----------~~~l~~~i~~~~~~~ 124 (241)
T 3idv_A 75 ATSASVLASRFDVSGYPTIKILKK-GQ---AVDYEGSRT-----------QEEIVAKVREVSQPD 124 (241)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEEET-TE---EEECCSCSC-----------HHHHHHHHHHHHSTT
T ss_pred ccCCHHHHHhcCCCcCCEEEEEcC-CC---cccccCccc-----------HHHHHHHHhhccCcc
Confidence 467789999999999999999974 64 466777643 567888888887764
No 182
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=95.80 E-value=0.021 Score=40.38 Aligned_cols=42 Identities=19% Similarity=0.166 Sum_probs=35.3
Q ss_pred cccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeec
Q 034203 7 LFLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
..+.++...|.+.++++.||++..|+.++|+++|+ ..++...
T Consensus 183 ~~i~v~~~~~~~~~l~~~f~v~~~Pslvl~~~~g~---~~~~~~~ 224 (244)
T 3q6o_A 183 KGVAVRRVLNTEANVVRKFGVTDFPSCYLLFRNGS---VSRVPVL 224 (244)
T ss_dssp TTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSC---EEECCCS
T ss_pred CceEEEEEeCchHHHHHHcCCCCCCeEEEEeCCCC---eEeeccc
Confidence 45678888888899999999999999999999997 4555533
No 183
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=95.72 E-value=0.012 Score=38.27 Aligned_cols=51 Identities=12% Similarity=0.192 Sum_probs=38.3
Q ss_pred eChhHHHHHhCCcc--cceEEEEeC-CCCCceeEEEe--ecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 16 FQSQDVARDFGAAC--TPEFFLFKK-DGRRPFQLVYH--GQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 16 D~~~~vA~~yga~~--tP~~fliD~-~G~~~v~~~Y~--G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
|..+.++..||++. .|+..+++. +|+ +.++. |. .+...|++.|+.+|+|+-
T Consensus 63 d~~~~~a~~~gi~~~~iPtl~i~~~~~g~---~~~~~~~g~-----------~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 63 KAFGAHAGNLNLKTDKFPAFAIQEVAKNQ---KFPFDQEKE-----------ITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp TTTGGGTTTTTCCSSSSSEEEEECTTTCC---BCCCCSSSC-----------CCHHHHHHHHHHHHHTCC
T ss_pred HHhHHHHHHcCCCcccCCEEEEEecCcCc---ccCCCCccc-----------cCHHHHHHHHHHHHcCCc
Confidence 56678999999999 999999985 564 21111 22 346799999999999974
No 184
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=95.65 E-value=0.01 Score=40.05 Aligned_cols=64 Identities=9% Similarity=0.199 Sum_probs=41.3
Q ss_pred EEEeChhH-HHHHhCC--cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 13 ITLFQSQD-VARDFGA--ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 13 vl~D~~~~-vA~~yga--~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
|-.|.... +++.|++ ..+|+++++|++|+ +..++.|........ -...+...+.+.|+.+++..
T Consensus 84 v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~--~~~~~~G~~~~~~~~-~~~~~~~~l~~~l~~~l~~~ 150 (164)
T 1sen_A 84 VNLEDEEEPKDEDFSPDGGYIPRILFLDPSGK--VHPEIINENGNPSYK-YFYVSAEQVVQGMKEAQERL 150 (164)
T ss_dssp EEEEGGGSCSCGGGCTTCSCSSEEEEECTTSC--BCTTCCCTTSCTTST-TCCCSHHHHHHHHHHHHHHH
T ss_pred EEecCCchHHHHHhcccCCcCCeEEEECCCCC--EEEEEeCCCCccchh-cccCCHHHHHHHHHHHHHhc
Confidence 44566655 7889998 56999999999996 334466653221110 01135678888888877653
No 185
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=95.64 E-value=0.0099 Score=37.22 Aligned_cols=31 Identities=19% Similarity=0.409 Sum_probs=23.9
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeec
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
..+++++||+..+|+.++++ +|+ +..++.|.
T Consensus 76 ~~~~~~~~~i~~~Pt~~~~~-~G~--~~~~~~G~ 106 (118)
T 1zma_A 76 LQAFRSRYGIPTVPGFVHIT-DGQ--INVRCDSS 106 (118)
T ss_dssp HHHHHHHHTCCSSCEEEEEE-TTE--EEEECCTT
T ss_pred HHHHHHHcCCCCCCeEEEEE-CCE--EEEEecCC
Confidence 35788999999999999995 675 34556665
No 186
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=95.64 E-value=0.017 Score=36.58 Aligned_cols=55 Identities=18% Similarity=0.288 Sum_probs=37.6
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCC---CCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKD---GRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~---G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.+.|- |=.|...+++++|++..+|+.++++.+ |+ +.-++.|.. ...+++.|+...
T Consensus 54 ~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~~~~~G~--~~~~~~G~~------------~~~l~~~~~~~~ 112 (118)
T 2f51_A 54 DVTFIKVDVDKNGNAADAYGVSSIPALFFVKKEGNEIK--TLDQFVGAD------------VSRIKADIEKFK 112 (118)
T ss_dssp TSEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEE--EEEEEESCC------------HHHHHHHHHHHC
T ss_pred CeEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCCCcce--EEEeecCCC------------HHHHHHHHHHhh
Confidence 34443 334677899999999999999999873 53 344566652 345777777643
No 187
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=95.62 E-value=0.025 Score=38.70 Aligned_cols=57 Identities=11% Similarity=0.066 Sum_probs=35.9
Q ss_pred hhHHHHHhCCcccceEEEEeCC-CCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCC
Q 034203 18 SQDVARDFGAACTPEFFLFKKD-GRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSNQKPS 88 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~-G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~~~t~~ 88 (101)
...+++.|++..+|+.++||++ |+ ...++.| + +...+.+.|+..+........++++
T Consensus 90 ~~~l~~~y~v~~~P~~~fld~~~G~--~l~~~~g-~-----------~~~~fl~~L~~~l~~~~~~~~~~~~ 147 (153)
T 2dlx_A 90 GQRYIQFYKLGDFPYVSILDPRTGQ--KLVEWHQ-L-----------DVSSFLDQVTGFLGEHGQLDGLSSS 147 (153)
T ss_dssp HHHHHHHHTCCSSSEEEEECTTTCC--CCEEESS-C-----------CHHHHHHHHHHHHHHTCSCSSCCCC
T ss_pred HHHHHHHcCCCCCCEEEEEeCCCCc--EeeecCC-C-----------CHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 4568899999999999999998 74 1222322 3 2455666666666554333333333
No 188
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=95.61 E-value=0.016 Score=41.62 Aligned_cols=38 Identities=24% Similarity=0.407 Sum_probs=30.1
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
|=.|...++++.||+..+|+++++ ++|+ +..+|.|..+
T Consensus 64 vd~~~~~~~~~~~~v~~~Pt~~~~-~~G~--~~~~~~g~~~ 101 (287)
T 3qou_A 64 LDCDAEQMIAAQFGLRAIPTVYLF-QNGQ--PVDGFQGPQP 101 (287)
T ss_dssp EETTTCHHHHHTTTCCSSSEEEEE-ETTE--EEEEEESCCC
T ss_pred EeCccCHHHHHHcCCCCCCeEEEE-ECCE--EEEEeeCCCC
Confidence 334678899999999999999999 6785 4556888743
No 189
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=95.60 E-value=0.0081 Score=43.33 Aligned_cols=49 Identities=20% Similarity=0.352 Sum_probs=35.2
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|.+.++++++|++.||+.|+.|.+|+ ..+..|..+ ...|+++|++.+.
T Consensus 185 v~~~~~l~~~~gv~gtPt~vi~~~~G~---~~~~~G~~~-----------~~~L~~~l~~~~~ 233 (241)
T 1v58_A 185 LSDNEKLMDDLGANVTPAIYYMSKENT---LQQAVGLPD-----------QKTLNIIMGNKLQ 233 (241)
T ss_dssp HHHHHHHHHHHTCCSSCEEEEEETTTE---EEEEESSCC-----------HHHHHHHTTC---
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCC---EEEecCCCC-----------HHHHHHHHHHHHH
Confidence 456678899999999999999998894 245677643 4577777766554
No 190
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=95.58 E-value=0.0087 Score=37.77 Aligned_cols=34 Identities=29% Similarity=0.418 Sum_probs=26.4
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeec
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
.|.+.+++++|++..+|+.+++ ++|+ +..++.|.
T Consensus 69 ~~~~~~l~~~~~v~~~Pt~~~~-~~G~--~~~~~~G~ 102 (114)
T 2oe3_A 69 VDESPDIAKECEVTAMPTFVLG-KDGQ--LIGKIIGA 102 (114)
T ss_dssp TTTCHHHHHHTTCCSBSEEEEE-ETTE--EEEEEESS
T ss_pred CCCCHHHHHHCCCCcccEEEEE-eCCe--EEEEEeCC
Confidence 4567889999999999997766 7885 34456665
No 191
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=95.38 E-value=0.0098 Score=39.33 Aligned_cols=61 Identities=13% Similarity=0.147 Sum_probs=38.7
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
=.|...+++++|++..+|+.++++ +|+ ...+..|.-++... .+...+...+.+.|++++++
T Consensus 62 d~d~~~~~~~~~~i~~~Pt~~~~~-~G~--~v~~~~g~~~~~~~-~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 62 DITEVPDFNKMYELYDPCTVMFFF-RNK--HIMIDLGTGNNNKI-NWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp ETTTCCTTTTSSCSCSSCEEEEEE-TTE--EEEEECC------C-CSCCSCHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHcCCCCCCEEEEEE-CCc--EEEEecCCCCccee-eeecCcHHHHHHHHHHHHHH
Confidence 356778899999999999999995 674 23334454332211 11112367899999998886
No 192
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.26 E-value=0.0072 Score=40.04 Aligned_cols=47 Identities=11% Similarity=0.013 Sum_probs=36.3
Q ss_pred hHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 19 QDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 19 ~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
..+|..|++..|||.++++ +|+ -+-+..|.+. ...+...|+.++++-
T Consensus 66 ~~la~~~~V~g~PT~i~f~-~G~--ev~Ri~G~~~-----------~~~f~~~L~~~l~~~ 112 (116)
T 3dml_A 66 PGLELARPVTFTPTFVLMA-GDV--ESGRLEGYPG-----------EDFFWPMLARLIGQA 112 (116)
T ss_dssp TTCBCSSCCCSSSEEEEEE-TTE--EEEEEECCCC-----------HHHHHHHHHHHHHHH
T ss_pred hhHHHHCCCCCCCEEEEEE-CCE--EEeeecCCCC-----------HHHHHHHHHHHHhhc
Confidence 4688999999999999999 896 3456777653 467777788777653
No 193
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.14 E-value=0.019 Score=36.39 Aligned_cols=53 Identities=6% Similarity=0.121 Sum_probs=37.3
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
|....++++|++..+|+.+++++.|+.. .+.|.|..- +...|.+.|+.++...
T Consensus 68 ~~~~~~~~~~~v~~~Pt~~~~~~g~~~~-~~~~~gg~~----------~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 68 TANDITNDQYKVEGFPTIYFAPSGDKKN-PIKFEGGNR----------DLEHLSKFIDEHATKR 120 (133)
T ss_dssp TTSCCCCSSCCCSSSSEEEEECTTCTTS-CEECCSSCC----------STTHHHHHHHHHSSSC
T ss_pred CcCHHHHhhcCCCcCCEEEEEeCCCccc-ceEecCCCc----------CHHHHHHHHHHhcccc
Confidence 3456778889999999999999876411 245664311 2357888999888764
No 194
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=94.86 E-value=0.059 Score=30.79 Aligned_cols=28 Identities=25% Similarity=0.415 Sum_probs=23.0
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecC
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~i 52 (101)
+.+++++||+..+|+.++ +| +.+++|..
T Consensus 39 ~~~~~~~~~v~~~Pt~~~---~G----~~~~~G~~ 66 (77)
T 1ilo_A 39 EMDQILEAGLTALPGLAV---DG----ELKIMGRV 66 (77)
T ss_dssp SHHHHHHHTCSSSSCEEE---TT----EEEECSSC
T ss_pred CHHHHHHCCCCcCCEEEE---CC----EEEEcCCC
Confidence 788999999999999988 78 46666663
No 195
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=94.82 E-value=0.023 Score=38.73 Aligned_cols=63 Identities=10% Similarity=0.122 Sum_probs=37.9
Q ss_pred eEEEe-ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 12 LITLF-QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 12 pvl~D-~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|-.| +..+++..|++..+|+++++|++|+ +.-+..|...+.... -...+...+-+.|+..|.
T Consensus 82 ~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~--~v~~~~G~~~~~~~~-~~~~~~~~ll~~~~~al~ 145 (151)
T 3ph9_A 82 MLNLMHETTDKNLSPDGQYVPRIMFVDPSLT--VRADIAGRYSNRLYT-YEPRDLPLLIENMKKALR 145 (151)
T ss_dssp EEEESSCCSCGGGCTTCCCSSEEEEECTTSC--BCTTCCCSCTTSTTC-CCGGGHHHHHHHHHHHHS
T ss_pred EEEecCCchhhHhhcCCCCCCEEEEECCCCC--EEEEEeCCcCCcccc-cchhhHHHHHHHHHHHHH
Confidence 34554 3456788999999999999999996 344456764333211 111233445555555543
No 196
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=94.81 E-value=0.069 Score=38.30 Aligned_cols=45 Identities=22% Similarity=0.457 Sum_probs=36.0
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|..++++++||+..+|++|+ +| +.+|.|..+ ...+.+.|+..+..
T Consensus 183 ~~~~~~~~~~~V~~vPt~~i---~G----~~~~~G~~~-----------~~~l~~~l~~~~~~ 227 (243)
T 2hls_A 183 YENPDIADKYGVMSVPSIAI---NG----YLVFVGVPY-----------EEDFLDYVKSAAEG 227 (243)
T ss_dssp TTCHHHHHHTTCCSSSEEEE---TT----EEEEESCCC-----------HHHHHHHHHHHHTT
T ss_pred ccCHHHHHHcCCeeeCeEEE---CC----EEEEeCCCC-----------HHHHHHHHHHHhhc
Confidence 35678999999999999998 68 456998853 56888888888764
No 197
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=94.60 E-value=0.041 Score=36.72 Aligned_cols=44 Identities=20% Similarity=0.354 Sum_probs=33.0
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
++.+.+.++++|+..||+++| +| + .+.|..+ ...++++|+++++
T Consensus 130 v~~~~~~a~~~gv~gtPt~~i---~g----~-~~~G~~~-----------~~~l~~~i~~~l~ 173 (175)
T 3gyk_A 130 IAQSMALAQKLGFNGTPSFVV---ED----A-LVPGFVE-----------QSQLQDAVDRARK 173 (175)
T ss_dssp HHHHHHHHHHHTCCSSSEEEE---TT----E-EECSCCC-----------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCccCCEEEE---CC----E-EeeCCCC-----------HHHHHHHHHHHHh
Confidence 466778999999999998776 56 2 4566632 5688999988774
No 198
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=94.53 E-value=0.03 Score=34.73 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=32.4
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|=.|.+.+++++||.+ .|+.++ .+|+ ... |.++ ...|++.|++.+..
T Consensus 32 vdid~~~~l~~~~g~~-vPtl~~--~~G~----~v~-g~~~-----------~~~L~~~l~~~~~~ 78 (87)
T 1ttz_A 32 VFIDDDAALESAYGLR-VPVLRD--PMGR----ELD-WPFD-----------APRLRAWLDAAPHA 78 (87)
T ss_dssp EECTTCHHHHHHHTTT-CSEEEC--TTCC----EEE-SCCC-----------HHHHHHHHHTCC--
T ss_pred EECCCCHHHHHHhCCC-cCeEEE--ECCE----EEe-CCCC-----------HHHHHHHHHHHHHH
Confidence 3445778999999998 999888 6785 333 5543 46788888766554
No 199
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=94.52 E-value=0.058 Score=35.79 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=31.4
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.+.+.++++|++.||++|| +|+ .+-.|. +. .+...+.+.|+.||+-+
T Consensus 138 ~~~~~a~~~gv~gTPtfiI---NGk----y~v~~~-~~--------~s~e~~~~~i~~Ll~kk 184 (184)
T 4dvc_A 138 RFDKQFQDSGLTGVPAVVV---NNR----YLVQGQ-SA--------KSLDEYFDLVNYLLTLK 184 (184)
T ss_dssp HHHHHHHHHTCCSSSEEEE---TTT----EEECGG-GC--------SSHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHcCCCcCCEEEE---CCE----EeeCCc-CC--------CCHHHHHHHHHHHHhCc
Confidence 3457889999999998766 574 211222 11 13678899999998753
No 200
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=94.34 E-value=0.13 Score=41.33 Aligned_cols=52 Identities=17% Similarity=0.221 Sum_probs=39.7
Q ss_pred eChhHHHHHhCCcccceEEEEeC---CCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKK---DGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~---~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
|...+++++||+..+|+.+++++ +|+ ....+.|.. +...+++.|+.+|....
T Consensus 76 d~~~~l~~~~~V~~~PTl~~f~~g~~~G~--~~~~~~g~~-----------~~~~L~~~l~~~l~~~~ 130 (519)
T 3t58_A 76 ETNSAVCREFNIAGFPTVRFFQAFTKNGS--GATLPGAGA-----------NVQTLRMRLIDALESHR 130 (519)
T ss_dssp GGGHHHHHHTTCCSBSEEEEECTTCCSCC--CEEECCSSC-----------CHHHHHHHHHHHHTTCC
T ss_pred cccHHHHHHcCCcccCEEEEEcCcccCCC--ceeEecCCC-----------CHHHHHHHHHHHHhhcc
Confidence 45789999999999999999997 554 234444442 36789999999987654
No 201
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=94.32 E-value=0.033 Score=37.66 Aligned_cols=46 Identities=17% Similarity=0.260 Sum_probs=34.8
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.|.+.++++++|++.||+.++ .+|+ +..|..+ ...|+++|++.+..
T Consensus 95 v~~~~~la~~~gI~gtPt~vi--~nG~-----~i~G~~~-----------~~~l~~~i~~~~~~ 140 (147)
T 3gv1_A 95 VAETTSLGEQFGFNGTPTLVF--PNGR-----TQSGYSP-----------MPQLEEIIRKNQQE 140 (147)
T ss_dssp HHHHHHHHHHTTCCSSCEEEC--TTSC-----EEESCCC-----------TTHHHHHHHHTSCC
T ss_pred HHHHHHHHHHhCCCccCEEEE--ECCE-----EeeCCCC-----------HHHHHHHHHHHHHh
Confidence 456789999999999999998 5674 3567754 24788888876553
No 202
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.26 E-value=0.067 Score=34.31 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=30.6
Q ss_pred EeChhHHHHHhCCc------ccceEEEEeCCCCCceeEEEeecCCCC
Q 034203 15 LFQSQDVARDFGAA------CTPEFFLFKKDGRRPFQLVYHGQFDDS 55 (101)
Q Consensus 15 ~D~~~~vA~~yga~------~tP~~fliD~~G~~~v~~~Y~G~idd~ 55 (101)
.|...+++++|++. .+|+.+++ ++|+ +..++.|..+..
T Consensus 67 ~~~~~~~~~~~~v~~~~~~~~~Pt~~~~-~~G~--~~~~~~G~~~~~ 110 (137)
T 2dj0_A 67 VGRYTDVSTRYKVSTSPLTKQLPTLILF-QGGK--EAMRRPQIDKKG 110 (137)
T ss_dssp TTTCHHHHHHTTCCCCSSSSCSSEEEEE-SSSS--EEEEESCBCSSS
T ss_pred CccCHHHHHHccCcccCCcCCCCEEEEE-ECCE--EEEEecCcCchH
Confidence 35778899999999 99999999 6786 456788887654
No 203
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=94.04 E-value=0.087 Score=34.77 Aligned_cols=28 Identities=25% Similarity=0.546 Sum_probs=21.3
Q ss_pred EEEeChhH----HHHHhCCcc-cceEEEEeCCCC
Q 034203 13 ITLFQSQD----VARDFGAAC-TPEFFLFKKDGR 41 (101)
Q Consensus 13 vl~D~~~~----vA~~yga~~-tP~~fliD~~G~ 41 (101)
|=.|+... +|..||++. +|+.+|+ ++|+
T Consensus 60 vdVde~r~~Sn~IA~~~~V~h~sPq~il~-k~G~ 92 (112)
T 3iv4_A 60 LIVQQERDLSDYIAKKTNVKHESPQAFYF-VNGE 92 (112)
T ss_dssp EEGGGGHHHHHHHHHHHTCCCCSSEEEEE-ETTE
T ss_pred EEeecCchhhHHHHHHhCCccCCCeEEEE-ECCE
Confidence 34455533 899999995 9999999 5783
No 204
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.99 E-value=0.06 Score=37.31 Aligned_cols=46 Identities=17% Similarity=0.202 Sum_probs=34.3
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|...++++.||+..+|+.++ +|+ ..+|.|..+ ...+.+.|+.++.
T Consensus 175 ~~~~~~l~~~~~v~~~Pt~~~---~G~---~~~~~G~~~-----------~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 175 ASENQDLAEQFQVVGVPKIVI---NKG---VAEFVGAQP-----------ENAFLGYIMAVYE 220 (229)
T ss_dssp GGGCHHHHHHTTCCSSSEEEE---GGG---TEEEESCCC-----------HHHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCcccCEEEE---CCE---EEEeeCCCC-----------HHHHHHHHHHHhh
Confidence 456788999999999999988 675 356888743 4567777766654
No 205
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=93.90 E-value=0.15 Score=35.32 Aligned_cols=35 Identities=14% Similarity=0.352 Sum_probs=28.4
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
|.+.+++++||++.+|+..+++. |+ ...+|.|..+
T Consensus 68 ~~~~~l~~~~~v~~~Ptl~~~~~-~~--~~~~~~G~~~ 102 (229)
T 2ywm_A 68 FTHKEETEKYGVDRVPTIVIEGD-KD--YGIRYIGLPA 102 (229)
T ss_dssp TTCHHHHHHTTCCBSSEEEEESS-SC--CCEEEESCCC
T ss_pred cccHHHHHHcCCCcCcEEEEECC-Cc--ccceecCCcc
Confidence 46789999999999999999963 43 3688999743
No 206
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=93.83 E-value=0.077 Score=37.15 Aligned_cols=44 Identities=18% Similarity=0.380 Sum_probs=33.7
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.+.+.++++|+..||+++| +|+ . +.|.. +...++++|+++++++
T Consensus 151 ~~~~~a~~~gV~gtPtfvv---nG~----~-~~G~~-----------~~e~l~~~i~~~~~~~ 194 (202)
T 3gha_A 151 KDSDLNQKMNIQATPTIYV---NDK----V-IKNFA-----------DYDEIKETIEKELKGK 194 (202)
T ss_dssp HHHHHHHHTTCCSSCEEEE---TTE----E-CSCTT-----------CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCCcCCEEEE---CCE----E-ecCCC-----------CHHHHHHHHHHHHHhh
Confidence 3456789999999999998 673 2 45542 3678999999998876
No 207
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=93.78 E-value=0.1 Score=36.04 Aligned_cols=54 Identities=20% Similarity=0.233 Sum_probs=38.4
Q ss_pred cceeEE-EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 9 LMWLIT-LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 9 l~fpvl-~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+.|-.+ .|...+++++||+..+|+.++++. |+ .+.|.|.. +...+.+.|+..+.
T Consensus 183 v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~-g~---~~~~~g~~-----------~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 183 IPLAKVDATAETDLAKRFDVSGYPTLKIFRK-GR---PYDYNGPR-----------EKYGIVDYMIEQSG 237 (241)
T ss_dssp CCEEEEETTTCHHHHHHTTCCSSSEEEEEET-TE---EEECCSCC-----------SHHHHHHHHHHHTT
T ss_pred EEEEEEECCCCHHHHHHcCCcccCEEEEEEC-Ce---EEEecCCC-----------CHHHHHHHHHhhhC
Confidence 444322 457789999999999999999985 64 45677753 25677777776653
No 208
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=93.77 E-value=0.097 Score=36.01 Aligned_cols=45 Identities=20% Similarity=0.471 Sum_probs=32.9
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.+.+.|+++|++.||+++| +|+ ..+...|..+ ...+.++|+.|++
T Consensus 140 ~~~~~a~~~gv~GtPtfvv---ng~--~~v~~~Ga~~-----------~e~~~~~i~~ll~ 184 (185)
T 3feu_A 140 NAKMLSEKSGISSVPTFVV---NGK--YNVLIGGHDD-----------PKQIADTIRYLLE 184 (185)
T ss_dssp HHHHHHHHHTCCSSSEEEE---TTT--EEECGGGCSS-----------HHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCccCEEEE---CCE--EEEecCCCCC-----------HHHHHHHHHHHHh
Confidence 4567789999999999987 564 2233466632 5689999999875
No 209
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=93.76 E-value=0.2 Score=34.89 Aligned_cols=36 Identities=11% Similarity=0.218 Sum_probs=28.5
Q ss_pred eEEEeChhHHHHHh--------CCcccceEEEEeCCCCCceeEEEeec
Q 034203 12 LITLFQSQDVARDF--------GAACTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 12 pvl~D~~~~vA~~y--------ga~~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
-|=.|+..++++.| |+..+|+++++|++|+ ..|.|.
T Consensus 79 kVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~----~v~~~t 122 (173)
T 3ira_A 79 KVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKK----PFFAGT 122 (173)
T ss_dssp EEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSC----EEEEES
T ss_pred eeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCC----ceeeee
Confidence 34445667889888 9999999999999994 677653
No 210
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=93.67 E-value=0.065 Score=38.49 Aligned_cols=57 Identities=16% Similarity=0.168 Sum_probs=39.6
Q ss_pred hhHHHHH-hCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 18 SQDVARD-FGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 18 ~~~vA~~-yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
+.+.|++ +|+..||++||++.+|+ .+.|..+.... ...+...++++|+.+|+..++.
T Consensus 159 ~~~~a~~~~GV~GtPtfvv~~~nG~-----~~~Ga~~~~~~---G~~~~e~l~~~I~~~l~~~~~~ 216 (226)
T 3f4s_A 159 DKSLAINKLGITAVPIFFIKLNDDK-----SYIEHNKVKHG---GYKELKYFTNVIDKLYGKAIVK 216 (226)
T ss_dssp HHHHHHHHHCCCSSCEEEEEECCTT-----CCCCGGGGEEE---SCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCEEEEEcCCCE-----EeeCCCCcccc---cccCHHHHHHHHHHHHhcCCcc
Confidence 4567888 99999999999998885 24666430000 1123688999999998765443
No 211
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=93.61 E-value=0.1 Score=36.76 Aligned_cols=53 Identities=17% Similarity=0.148 Sum_probs=37.8
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCC--ceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRR--PFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~--~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
|...++++.|++..+|+.+++++.++. +..+.|.| .+...|++.|..++....
T Consensus 76 ~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g------------~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 76 ETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG------------ADVQTLRERLIDALESHH 130 (244)
T ss_dssp TTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT------------CCHHHHHHHHHHHHHTCT
T ss_pred hhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC------------CCHHHHHHHHHHHHHhcc
Confidence 568899999999999999999974321 01122222 146789999999887654
No 212
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=93.49 E-value=0.059 Score=36.60 Aligned_cols=47 Identities=6% Similarity=0.196 Sum_probs=32.4
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
+.+.+.++++|+..||+++| +|+ ..+...|..+ ...+.++|+.+++.
T Consensus 139 ~~~~~~a~~~gv~gtPt~~v---ng~--~~~~~~G~~~-----------~e~l~~~i~~l~~k 185 (192)
T 3h93_A 139 EKAKKLAMAYQVTGVPTMVV---NGK--YRFDIGSAGG-----------PEETLKLADYLIEK 185 (192)
T ss_dssp HHHHHHHHHHTCCSSSEEEE---TTT--EEEEHHHHTS-----------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEEE---CCE--EEecccccCC-----------HHHHHHHHHHHHHH
Confidence 34567889999999997776 564 1222337642 56888888888753
No 213
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=93.30 E-value=0.086 Score=39.30 Aligned_cols=35 Identities=17% Similarity=0.447 Sum_probs=29.0
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
.|...+++++||++..|+.+++ ++|+ ...|.|..+
T Consensus 75 ~~~~~~l~~~~~v~~~Pt~~~~-~~g~---~~~~~G~~~ 109 (350)
T 1sji_A 75 AKKEAKLAKKLGFDEEGSLYVL-KGDR---TIEFDGEFA 109 (350)
T ss_dssp TTTTHHHHHHHTCCSTTEEEEE-ETTE---EEEECSCCC
T ss_pred CCCCHHHHHhcCCCccceEEEE-ECCc---EEEecCCCC
Confidence 4577899999999999999999 6685 568988743
No 214
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=93.29 E-value=0.067 Score=36.24 Aligned_cols=46 Identities=11% Similarity=0.080 Sum_probs=30.9
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
++.+.+.++++|+..||+ |+|| |+ ....|.. +...+.++|+.+++.
T Consensus 136 v~~~~~~a~~~gv~gtPt-~vin--g~----~~~~g~~-----------~~~~l~~~i~~~l~~ 181 (195)
T 2znm_A 136 ALKMQKLTEQYRIDSTPT-VIVG--GK----YRVIFNN-----------GFDGGVHTIKELVAK 181 (195)
T ss_dssp HHHHHHHHHHTTCCSSSE-EEET--TT----EEECCCS-----------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCe-EEEC--CE----EEEcCCC-----------CHHHHHHHHHHHHHH
Confidence 456678899999999999 6665 63 3334441 345677777776643
No 215
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=92.97 E-value=0.058 Score=37.91 Aligned_cols=47 Identities=13% Similarity=0.215 Sum_probs=32.8
Q ss_pred eEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 12 LITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 12 pvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
+...|.+.+++++||++.||++|+.| |+ ++.|..+ ...|++.|++++
T Consensus 164 ~~~v~~~~~l~~~~gV~gtPt~v~~d--G~-----~~~G~~~-----------~~~l~~~l~~~~ 210 (216)
T 1eej_A 164 DVDIADHYALGVQLGVSGTPAVVLSN--GT-----LVPGYQP-----------PKEMKEFLDEHQ 210 (216)
T ss_dssp SCCHHHHHHHHHHHTCCSSSEEECTT--SC-----EEESCCC-----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCccCEEEEcC--Ce-----EecCCCC-----------HHHHHHHHHHhh
Confidence 34567788999999999999986544 63 3456643 456777776654
No 216
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=92.78 E-value=0.17 Score=34.70 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=35.0
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
+.+.+.|+++|+..||+.+++. +|+ ....+.|.. +...+.++|+++++.
T Consensus 163 ~~~~~~a~~~gv~g~Pt~~i~~-~G~--~~~~~~G~~-----------~~~~l~~~l~~~~~~ 211 (216)
T 2in3_A 163 LAGFQRVAQWGISGFPALVVES-GTD--RYLITTGYR-----------PIEALRQLLDTWLQQ 211 (216)
T ss_dssp HHHHHHHHHTTCCSSSEEEEEE-TTE--EEEEESSCC-----------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcccceEEEEE-CCE--EEEeccCCC-----------CHHHHHHHHHHHHHh
Confidence 3456778999999999988764 573 122566652 257899999998865
No 217
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=92.74 E-value=0.23 Score=39.93 Aligned_cols=35 Identities=20% Similarity=0.331 Sum_probs=32.0
Q ss_pred cccceeEEEeChhHHHHHhCCcccceEEEEeCCCC
Q 034203 7 LFLMWLITLFQSQDVARDFGAACTPEFFLFKKDGR 41 (101)
Q Consensus 7 ~~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~ 41 (101)
.++.++...|.+.++++.||++..|+.++|+++|+
T Consensus 183 ~~v~v~~v~~~~~~l~~kfgV~~~Pslvl~~~nGk 217 (519)
T 3t58_A 183 HAVAVRRVLNTESDLVNKFGVTDFPSCYLLLRNGS 217 (519)
T ss_dssp TTEEEEEEETTCHHHHHHHTCCCSSEEEEEETTSC
T ss_pred CCeeEEEecCchHHHHHHcCCCCCCeEEEEeCCCc
Confidence 45778889999999999999999999999999996
No 218
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=92.56 E-value=0.045 Score=38.43 Aligned_cols=61 Identities=10% Similarity=0.174 Sum_probs=40.3
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeE-EEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQL-VYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~-~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|=.|+..++|..|++...||.+++- +|+ .+ +-.|.-|++. ..+...+...|.+.|+.++.|
T Consensus 79 VDVDe~~e~a~~y~V~siPT~~fFk-~G~---~v~vd~Gtgd~~k-~vGa~~~k~~l~~~ie~~~r~ 140 (160)
T 2av4_A 79 VDITEVPDFNTMYELYDPVSVMFFY-RNK---HMMIDLGTGNNNK-INWPMNNKQEFIDIVETIFRG 140 (160)
T ss_dssp EETTTCCTTTTTTTCCSSEEEEEEE-TTE---EEEEECSSSCCSC-BCSCCCCHHHHHHHHHHHHHH
T ss_pred EECCCCHHHHHHcCCCCCCEEEEEE-CCE---EEEEecCCCCcCe-EEeecCCHHHHHHHHHHHHHH
Confidence 4458999999999999999998885 563 22 2445544332 222222366788888877754
No 219
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=92.35 E-value=0.17 Score=34.07 Aligned_cols=45 Identities=18% Similarity=0.240 Sum_probs=31.6
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
++.+.+.++++|+..||+ |+|| |+ ....|. +...+.++|+.+++.
T Consensus 141 v~~~~~~a~~~gv~gtPt-~vin--g~----~~~~g~------------~~~~l~~~i~~~~~~ 185 (193)
T 2rem_A 141 FQAARAYALKVRPVGTPT-IVVN--GR----YMVTGH------------DFEDTLRITDYLVSR 185 (193)
T ss_dssp HHHHHHHHHHHCCSSSSE-EEET--TT----EEECCS------------SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCe-EEEC--CE----EEecCC------------CHHHHHHHHHHHHHH
Confidence 345677899999999999 6665 53 222333 257888899888764
No 220
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=92.12 E-value=0.12 Score=30.33 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=23.6
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
...+++++||+..+|+.++ +| +.++.|...
T Consensus 43 ~~~~~~~~~gv~~vPt~~i---~g----~~~~~G~~~ 72 (80)
T 2k8s_A 43 ARIAEAEKAGVKSVPALVI---DG----AAFHINFGA 72 (80)
T ss_dssp STHHHHHHHTCCEEEEEEE---TT----EEEEEEEEE
T ss_pred hhHHHHHHcCCCcCCEEEE---CC----EEEEeccCc
Confidence 3678899999999999877 67 466788743
No 221
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=92.09 E-value=0.17 Score=34.17 Aligned_cols=43 Identities=14% Similarity=0.243 Sum_probs=28.0
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
+.+.++++|+..||++|| +|+ .+.|.. +...++++|+.+++++
T Consensus 138 ~~~~a~~~gv~GtPt~vv---nG~-----~~~G~~-----------~~~~l~~~i~~~~~~~ 180 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI---NGE-----KVEDPY-----------DYESYEKLLKDKIKLE 180 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE---TTE-----ECSCTT-----------CHHHHHHHHHC-----
T ss_pred HHHHHHHcCCCCCCeEEE---CCE-----EcCCCC-----------CHHHHHHHHHHHHHhh
Confidence 456789999999999887 572 234542 3578999998887654
No 222
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=91.94 E-value=0.49 Score=33.92 Aligned_cols=46 Identities=20% Similarity=0.206 Sum_probs=34.3
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
+.+.|+++|+..||+++| +|+ ....|.. ....+.++|+++++...+
T Consensus 172 ~~~~a~~~Gv~GvPtfvv---~g~----~~v~Ga~-----------~~e~~~~~i~~~~~~~~~ 217 (239)
T 3gl5_A 172 DEREAAQLGATGVPFFVL---DRA----YGVSGAQ-----------PAEVFTQALTQAWGERTP 217 (239)
T ss_dssp HHHHHHHTTCCSSSEEEE---TTT----EEEESSC-----------CHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHCCCCeeCeEEE---CCc----EeecCCC-----------CHHHHHHHHHHHHhhcCc
Confidence 445678999999999886 453 4456762 257899999999988644
No 223
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=91.48 E-value=0.14 Score=31.52 Aligned_cols=43 Identities=21% Similarity=0.165 Sum_probs=30.7
Q ss_pred HHHHHhCCcccceEEEEeCCCCCce-eEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 20 DVARDFGAACTPEFFLFKKDGRRPF-QLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 20 ~vA~~yga~~tP~~fliD~~G~~~v-~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.+++ ++..+|+.+++++.|+ + ..+|.|.. +...+.+.|+.++.
T Consensus 74 ~~~~--~v~~~Pt~~~~~~~~~--~~~~~~~G~~-----------~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 74 DVPD--EIQGFPTIKLYPAGAK--GQPVTYSGSR-----------TVEDLIKFIAENGK 117 (121)
T ss_dssp CCSS--CCSSSSEEEEECSSCT--TSCCCCCCCS-----------CHHHHHHHHHHTSS
T ss_pred cccc--ccCcCCeEEEEeCcCC--CCceEecCCC-----------CHHHHHHHHHhccC
Confidence 3554 9999999999998874 1 24455543 35788888887764
No 224
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=91.18 E-value=0.13 Score=36.10 Aligned_cols=42 Identities=21% Similarity=0.345 Sum_probs=30.1
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
.|.+.+++++||++.||+.|+ .+|+ ++.|.. +...|+++|++
T Consensus 167 v~~~~~l~~~~gV~gTPt~vi--~nG~-----~~~G~~-----------~~~~l~~~l~~ 208 (211)
T 1t3b_A 167 VKKHYELGIQFGVRGTPSIVT--STGE-----LIGGYL-----------KPADLLRALEE 208 (211)
T ss_dssp HHHHHHHHHHHTCCSSCEEEC--TTSC-----CCCSCC-----------CHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCCEEEE--eCCE-----EecCCC-----------CHHHHHHHHHh
Confidence 456678899999999999888 4673 234543 25678877765
No 225
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=91.08 E-value=0.53 Score=32.20 Aligned_cols=34 Identities=21% Similarity=0.452 Sum_probs=26.1
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
..+++++||+..+|+.+++. +|+. ...+|.|..+
T Consensus 67 ~~~~~~~~~v~~~Pt~~~~~-~g~~-~~~~~~G~~~ 100 (226)
T 1a8l_A 67 GKELAKRYRIDRAPATTITQ-DGKD-FGVRYFGLPA 100 (226)
T ss_dssp HHHHHHHTTCCSSSEEEEEE-TTBC-CSEEEESCCC
T ss_pred cHHHHHHcCCCcCceEEEEc-CCce-eeEEEeccCc
Confidence 67899999999999999984 4531 1378998743
No 226
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=90.93 E-value=0.23 Score=31.22 Aligned_cols=29 Identities=21% Similarity=0.488 Sum_probs=22.7
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
...+++++||++.+|+.++ +|+ .|.|..+
T Consensus 54 ~~~~l~~~~~V~~~PT~~i---~G~-----~~~G~~~ 82 (106)
T 3kp8_A 54 PQAQECTEAGITSYPTWII---NGR-----TYTGVRS 82 (106)
T ss_dssp CCCHHHHHTTCCSSSEEEE---TTE-----EEESCCC
T ss_pred hhHHHHHHcCCeEeCEEEE---CCE-----EecCCCC
Confidence 5688999999999999665 783 3788643
No 227
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=90.49 E-value=0.47 Score=33.41 Aligned_cols=42 Identities=26% Similarity=0.430 Sum_probs=31.2
Q ss_pred hhHHH-HHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 18 SQDVA-RDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 18 ~~~vA-~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
+.+.+ +++|++.||++|| +|+ .+.|.. +...|+++|+.+++.
T Consensus 156 ~~~~a~~~~GV~GtPtfvv---ng~-----~~~G~~-----------~~e~l~~~i~~~~~~ 198 (205)
T 3gmf_A 156 ETDEAINQYNVSGTPSFMI---DGI-----LLAGTH-----------DWASLRPQILARLNE 198 (205)
T ss_dssp HHHHHHHHHCCCSSSEEEE---TTE-----ECTTCC-----------SHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCccCCEEEE---CCE-----EEeCCC-----------CHHHHHHHHHHHhhc
Confidence 34556 8999999999998 572 345543 367899999988765
No 228
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=90.47 E-value=0.15 Score=32.15 Aligned_cols=25 Identities=8% Similarity=0.267 Sum_probs=22.4
Q ss_pred eChhHHHHHhCCcccceEEEEeCCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDG 40 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G 40 (101)
|....+++.|++..+|+.+++++.+
T Consensus 79 d~~~~~~~~~~i~~~Pt~~~~~~~~ 103 (123)
T 1wou_A 79 DPNNDFRKNLKVTAVPTLLKYGTPQ 103 (123)
T ss_dssp CTTCHHHHHHCCCSSSEEEETTSSC
T ss_pred chhHHHHHHCCCCeeCEEEEEcCCc
Confidence 7788999999999999999999833
No 229
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=90.43 E-value=0.47 Score=35.80 Aligned_cols=48 Identities=21% Similarity=0.376 Sum_probs=35.6
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
.|...+++++||++..||.+++. +|+ ...|.|..+ ...+.+.|...+.
T Consensus 77 ~~~~~~l~~~~~V~~~PTl~~f~-~G~---~~~y~G~~~-----------~~~i~~~i~~~~~ 124 (367)
T 3us3_A 77 SEKDAAVAKKLGLTEEDSIYVFK-EDE---VIEYDGEFS-----------ADTLVEFLLDVLE 124 (367)
T ss_dssp TTTTHHHHHHHTCCSTTEEEEEE-TTE---EEECCSCCS-----------HHHHHHHHHHHHS
T ss_pred CcccHHHHHHcCCCcCceEEEEE-CCc---EEEeCCCCC-----------HHHHHHHHHHhcC
Confidence 35678999999999999999998 575 567888643 4556666655543
No 230
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=90.40 E-value=0.16 Score=34.03 Aligned_cols=46 Identities=9% Similarity=0.040 Sum_probs=30.3
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+.+.+.++++|+..||+. +| +|+ ..+...|.. +...+.++|+.+++
T Consensus 149 ~~~~~~a~~~gv~gtPt~-~i--ng~--~~~~~~g~~-----------~~~~l~~~i~~~l~ 194 (195)
T 3c7m_A 149 EKWKASYDVAKIQGVPAY-VV--NGK--YLIYTKSIK-----------SIDAMADLIRELAS 194 (195)
T ss_dssp HHGGGHHHHHHHHCSSEE-EE--TTT--EEECGGGCC-----------CHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCccCEE-EE--CCE--EEeccCCCC-----------CHHHHHHHHHHHHh
Confidence 345677899999999995 55 464 112111321 35789999999885
No 231
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=89.83 E-value=0.14 Score=41.22 Aligned_cols=63 Identities=11% Similarity=0.129 Sum_probs=41.7
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCC-CCCCCCcHHHHHHHHHHHHcC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRP-SNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~-~~~~~~~~~~L~~AI~alLag 78 (101)
.|...+++++|++...|+.+++++.|.. ....|.|..+.... --....+...|+..+++|++.
T Consensus 90 ~d~~~~la~~y~V~~~PTlilf~~gg~~-~~~~y~G~r~~e~L~fI~k~l~~~eLe~~~e~Link 153 (470)
T 3qcp_A 90 CASEVDLCRKYDINFVPRLFFFYPRDSC-RSNEECGTSSLEHVAFENSHLEVDELESEVRRLVNK 153 (470)
T ss_dssp TTTCHHHHHHTTCCSSCEEEEEEESSCC-CTTSCCCCCCEEEEECSCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHcCCCccCeEEEEECCCce-EEEEeeCCCCHHHHHHHHHhcCHHHHHHHHHHHhhh
Confidence 4677899999999999999999876631 13457775332210 001224567888888888743
No 232
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=89.70 E-value=0.42 Score=36.78 Aligned_cols=50 Identities=16% Similarity=0.294 Sum_probs=35.5
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
|=.|...+++++||+..+|+.+++ ++|+ ....|.|..+ ...+.+.|...+
T Consensus 59 vd~~~~~~l~~~~~v~~~Ptl~~~-~~g~--~~~~~~G~~~-----------~~~l~~~~~~~~ 108 (481)
T 3f8u_A 59 VDCTANTNTCNKYGVSGYPTLKIF-RDGE--EAGAYDGPRT-----------ADGIVSHLKKQA 108 (481)
T ss_dssp EETTTCHHHHHHTTCCEESEEEEE-ETTE--EEEECCSCSS-----------HHHHHHHHHHHT
T ss_pred EECCCCHHHHHhcCCCCCCEEEEE-eCCc--eeeeecCccC-----------HHHHHHHHHhhc
Confidence 334577899999999999988888 5674 3567888643 455666665554
No 233
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=89.55 E-value=0.68 Score=29.79 Aligned_cols=60 Identities=10% Similarity=0.354 Sum_probs=38.2
Q ss_pred hhcccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHH
Q 034203 5 LYLFLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (101)
Q Consensus 5 ~~~~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~ 73 (101)
-|..+.| +-.|.+.. ++.|++...|+.+++. +|+ ..-++.|..+.. +...+...|+..|.
T Consensus 51 ~~~~v~f-~kvd~d~~-~~~~~v~~~PT~~~fk-~G~--~v~~~~G~~~~g----g~~~~~~~le~~L~ 110 (118)
T 3evi_A 51 KFPETKF-VKAIVNSC-IQHYHDNCLPTIFVYK-NGQ--IEAKFIGIIECG----GINLKLEELEWKLA 110 (118)
T ss_dssp HCTTSEE-EEEEGGGT-STTCCGGGCSEEEEEE-TTE--EEEEEESTTTTT----CSSCCHHHHHHHHH
T ss_pred HCCCCEE-EEEEhHHh-HHHCCCCCCCEEEEEE-CCE--EEEEEeChhhhC----CCCCCHHHHHHHHH
Confidence 3444555 34565544 7899999999988885 686 466788885432 12345566666554
No 234
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=89.31 E-value=1.2 Score=32.82 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=38.8
Q ss_pred hhHHHHHhCCcc--cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCC
Q 034203 18 SQDVARDFGAAC--TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVS 82 (101)
Q Consensus 18 ~~~vA~~yga~~--tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~ 82 (101)
.+.+++.||+.. .|+..+++..+. ...|.- +. ...+...+++-++..++|+..+
T Consensus 180 ~~~~~~~fgi~~~~~P~~~~~~~~~~---~~ky~~--~~------~~~~~~~l~~fi~~~l~g~~~~ 235 (361)
T 3uem_A 180 NQRILEFFGLKKEECPAVRLITLEEE---MTKYKP--ES------EELTAERITEFCHRFLEGKIKP 235 (361)
T ss_dssp GHHHHHHTTCCTTTCSEEEEEECC-----CCEECC--SS------CCCCHHHHHHHHHHHHTTCSCC
T ss_pred HHHHHHHcCCCccCCccEEEEEcCCc---ccccCC--Cc------cccCHHHHHHHHHHHhcCCCcc
Confidence 578999999987 999999998553 345652 10 1135789999999999997433
No 235
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=89.20 E-value=0.18 Score=34.49 Aligned_cols=34 Identities=12% Similarity=0.057 Sum_probs=26.5
Q ss_pred cccee-EEEeChhHHHHHhC---CcccceEEEEeCCCC
Q 034203 8 FLMWL-ITLFQSQDVARDFG---AACTPEFFLFKKDGR 41 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yg---a~~tP~~fliD~~G~ 41 (101)
.+.|- |-.|.+.+++++|+ +...|+++++|++|+
T Consensus 85 ~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~ 122 (167)
T 1z6n_A 85 NIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFN 122 (167)
T ss_dssp TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCC
T ss_pred CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCC
Confidence 34443 33467778889997 999999999999986
No 236
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=88.74 E-value=0.58 Score=35.26 Aligned_cols=49 Identities=24% Similarity=0.299 Sum_probs=35.9
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeE-EEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQL-VYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~-~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
|...++++.||++..|+.+++. +|+ +.- .|.|..+ ...+.+.|+..+..
T Consensus 69 ~~~~~l~~~~~v~~~Pt~~~f~-~G~--~~~~~~~G~~~-----------~~~l~~~i~~~~~~ 118 (382)
T 2r2j_A 69 DQHSDIAQRYRISKYPTLKLFR-NGM--MMKREYRGQRS-----------VKALADYIRQQKSD 118 (382)
T ss_dssp TTCHHHHHHTTCCEESEEEEEE-TTE--EEEEECCSCCS-----------HHHHHHHHHHHHSC
T ss_pred CccHHHHHhcCCCcCCEEEEEe-CCc--EeeeeecCcch-----------HHHHHHHHHHhccC
Confidence 4678999999999999998875 674 222 4777532 56788888877743
No 237
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=88.46 E-value=0.81 Score=31.35 Aligned_cols=43 Identities=12% Similarity=0.116 Sum_probs=29.8
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.+.+.++++|+..||+++| +|+ . +.|.. +...+.++|+.+++.
T Consensus 142 ~~~~~a~~~gv~gtPt~vv---ng~----~-~~~~~-----------~~e~l~~~i~~ll~k 184 (193)
T 3hz8_A 142 KMQELTETFQIDGVPTVIV---GGK----Y-KVEFA-----------DWESGMNTIDLLADK 184 (193)
T ss_dssp HHHHHHHHTTCCSSSEEEE---TTT----E-EECCS-----------SHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcCCEEEE---CCE----E-EecCC-----------CHHHHHHHHHHHHHH
Confidence 3457789999999999887 574 2 23322 256788888887753
No 238
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=88.06 E-value=0.4 Score=31.79 Aligned_cols=22 Identities=9% Similarity=0.009 Sum_probs=17.3
Q ss_pred eChhHHHHHhCCcccceEEEEeCCC
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDG 40 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G 40 (101)
+...+.++++|+..||+ |+| +|
T Consensus 136 ~~~~~~a~~~gv~gtPt-~vv--ng 157 (175)
T 1z6m_A 136 SAVIAEANAAHIQFVPT-III--GE 157 (175)
T ss_dssp HHHHHHHHHHTCCSSCE-EEE--TT
T ss_pred HHHHHHHHHcCCCCcCe-EEE--CC
Confidence 44667899999999999 555 46
No 239
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=87.97 E-value=0.79 Score=37.55 Aligned_cols=47 Identities=15% Similarity=0.217 Sum_probs=37.0
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
|....+++.||+...|+.++++ +|+ ...|.|.++ ...+.+.|+.++.
T Consensus 496 ~~~~~~~~~~~v~~~Pt~~~~~-~g~---~~~~~g~~~-----------~~~l~~fi~~~~~ 542 (780)
T 3apo_A 496 TIHEGLCNMYNIQAYPTTVVFN-QSS---IHEYEGHHS-----------AEQILEFIEDLRN 542 (780)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEE-TTE---EEEECSCSC-----------HHHHHHHHHHHHS
T ss_pred CCCHHHHHHcCCCcCCeEEEEc-CCc---eeeecCccc-----------HHHHHHHHHhhcc
Confidence 4667899999999999999995 474 467777643 4678888888876
No 240
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=87.96 E-value=0.53 Score=36.17 Aligned_cols=50 Identities=14% Similarity=0.200 Sum_probs=37.7
Q ss_pred hHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 19 QDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 19 ~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
.++++.|++..+|+.+++++.|+.. ..+|.|.. +...+.+.|+..+....
T Consensus 415 ~~~~~~~~v~~~Pt~~~~~~~~~~~-~~~~~G~~-----------~~~~l~~~l~~~~~~~~ 464 (481)
T 3f8u_A 415 NDVPSPYEVRGFPTIYFSPANKKLN-PKKYEGGR-----------ELSDFISYLQREATNPP 464 (481)
T ss_dssp SCCCTTCCCCSSSEEEEECTTCTTS-CEECCSCC-----------SHHHHHHHHHHHCSSCC
T ss_pred hhhHhhCCCcccCEEEEEeCCCeEe-eeEeCCCC-----------CHHHHHHHHHHhcCCcc
Confidence 3688999999999999999887411 46777763 35688888888766543
No 241
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=87.68 E-value=0.74 Score=31.64 Aligned_cols=49 Identities=10% Similarity=0.126 Sum_probs=32.3
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.+.+.|+++|+..||+.+|-+ +|+ ......|.- +...+.++|+.++++.
T Consensus 157 ~~~~~a~~~gv~g~Pt~~v~~-~~~--~~~~~~g~~-----------~~e~~~~~i~~~~~~~ 205 (208)
T 3kzq_A 157 DQLSLAKSLGVNSYPSLVLQI-NDA--YFPIEVDYL-----------STEPTLKLIRERIIEN 205 (208)
T ss_dssp HHHHHHHHTTCCSSSEEEEEE-TTE--EEEECCCSS-----------CSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcccEEEEEE-CCE--EEEeeCCCC-----------CHHHHHHHHHHHHhcc
Confidence 345678899999999887755 452 122223331 2467888999988764
No 242
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=87.00 E-value=0.82 Score=28.21 Aligned_cols=42 Identities=7% Similarity=0.210 Sum_probs=28.2
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+..+++++|| ..+|+.| + +|+ ....|.++ ...|+++|++++.
T Consensus 55 ~~~el~~~~g-~~vP~l~-~--~g~----~~~~~g~~-----------~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 55 ENSTWYERYK-FDIPVFH-L--NGQ----FLMMHRVN-----------TSKLEKQLRKLSG 96 (100)
T ss_dssp TTHHHHHHSS-SSCSEEE-E--SSS----EEEESSCC-----------HHHHHHHHHSSSC
T ss_pred chHHHHHHHC-CCCCEEE-E--CCE----EEEecCCC-----------HHHHHHHHHHHHh
Confidence 5688999999 9999764 4 464 22344443 4578887776553
No 243
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=86.77 E-value=1 Score=34.94 Aligned_cols=48 Identities=17% Similarity=0.217 Sum_probs=36.0
Q ss_pred eChhHHHHHhCCcccceEEEEeCCCCCce--eEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 16 FQSQDVARDFGAACTPEFFLFKKDGRRPF--QLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fliD~~G~~~v--~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
|...+++++||++..|+.+++.. |+ . ...|.|..+ ...+.+.|...+.
T Consensus 73 ~~~~~l~~~~~v~~~Pt~~~~~~-g~--~~~~~~~~G~~~-----------~~~l~~~l~~~~~ 122 (504)
T 2b5e_A 73 TENQDLCMEHNIPGFPSLKIFKN-SD--VNNSIDYEGPRT-----------AEAIVQFMIKQSQ 122 (504)
T ss_dssp TTCHHHHHHTTCCSSSEEEEEET-TC--TTCEEECCSCCS-----------HHHHHHHHHHHTS
T ss_pred CCCHHHHHhcCCCcCCEEEEEeC-Cc--cccceeecCCCC-----------HHHHHHHHHHhcC
Confidence 46789999999999999999975 54 3 567887633 4567777776663
No 244
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=86.43 E-value=0.7 Score=31.17 Aligned_cols=46 Identities=13% Similarity=0.208 Sum_probs=31.0
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcH-HHHHHHHHHHHcC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTG-RDIRLAIECVLSG 78 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~-~~L~~AI~alLag 78 (101)
.+.+.++++|+..||+++| +|+ ....|.-.. +. ..+.+.|+.|++.
T Consensus 139 ~~~~~a~~~gv~gtPt~vi---ng~----~~~~g~~~~---------~~~e~~~~~i~~L~~~ 185 (195)
T 3hd5_A 139 RASQLAEAAHIDGTPAFAV---GGR----YMTSPVLAG---------NDYAGALKVVDQLIVQ 185 (195)
T ss_dssp HHHHHHHHTTCCSSSEEEE---TTT----EEECTTTTT---------GGGTTHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcCceEEE---CCE----EEeCccccC---------ChHHHHHHHHHHHHHH
Confidence 4567889999999999988 574 333443211 23 4677788877764
No 245
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=86.28 E-value=0.8 Score=33.72 Aligned_cols=24 Identities=8% Similarity=0.373 Sum_probs=21.3
Q ss_pred ChhHHHHHhCCcccceEEEEeCCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDG 40 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G 40 (101)
...++++.||+..+|+.++++..+
T Consensus 79 ~~~~l~~~~~I~~~Pt~~~~~~g~ 102 (298)
T 3ed3_A 79 KNKALCAKYDVNGFPTLMVFRPPK 102 (298)
T ss_dssp TTHHHHHHTTCCBSSEEEEEECCC
T ss_pred cCHHHHHhCCCCccceEEEEECCc
Confidence 468999999999999999999754
No 246
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=86.26 E-value=0.51 Score=38.68 Aligned_cols=55 Identities=13% Similarity=0.051 Sum_probs=39.5
Q ss_pred EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 15 LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 15 ~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.|....+++.||+..+|+.+++ ++|+ +..++.|.-.. ..+...+.+.|+.+|+..
T Consensus 715 ~~~~~~~~~~~~v~~~Pt~~~~-~~g~--~~~~~~G~~~g-------~~~~~~l~~~l~~~l~~~ 769 (780)
T 3apo_A 715 CQAYPQTCQKAGIKAYPSVKLY-QYER--AKKSIWEEQIN-------SRDAKTIAALIYGKLETL 769 (780)
T ss_dssp TTTCHHHHHHTTCCSSSEEEEE-EEET--TTTEEEEEEEC-------CCCHHHHHHHHHHHTTC-
T ss_pred CCCCHHHHHhcCCCcCCEEEEE-cCCC--ccccccCcccC-------CcCHHHHHHHHHHHHHHh
Confidence 3566789999999999999999 6675 34567774100 113678999999988654
No 247
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=85.93 E-value=1.6 Score=27.95 Aligned_cols=46 Identities=15% Similarity=0.461 Sum_probs=33.0
Q ss_pred HHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 23 RDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 23 ~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
+.|++..+|+.++++ +|+ +.-++.|..+-. +...+...|++.|+..
T Consensus 74 ~~~~i~~~Pt~~~~~-~G~--~v~~~~G~~~~~----~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 74 EHYHDNCLPTIFVYK-NGQ--IEGKFIGIIECG----GINLKLEELEWKLSEV 119 (135)
T ss_dssp SSCCSSCCSEEEEES-SSS--CSEEEESTTTTT----CTTCCHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEEE-CCE--EEEEEEeEEeeC----CCcCCHHHHHHHHHHc
Confidence 789999999999996 786 567788875321 1123567788887775
No 248
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=85.91 E-value=0.33 Score=35.49 Aligned_cols=32 Identities=13% Similarity=0.357 Sum_probs=24.8
Q ss_pred hHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 19 QDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 19 ~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
..+++.|++..+|+.+++. +|+ ++-++.|..+
T Consensus 175 ~~l~~~~~I~~~PTll~~~-~G~--~v~~~vG~~~ 206 (245)
T 1a0r_P 175 TGAGDRFSSDVLPTLLVYK-GGE--LLSNFISVTE 206 (245)
T ss_dssp HCCTTSSCTTTCSEEEEEE-TTE--EEEEETTGGG
T ss_pred HHHHHHCCCCCCCEEEEEE-CCE--EEEEEeCCcc
Confidence 4577899999999998886 785 4556788754
No 249
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=85.90 E-value=1.6 Score=31.04 Aligned_cols=52 Identities=19% Similarity=0.328 Sum_probs=35.7
Q ss_pred cceeEE-EeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 9 LMWLIT-LFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 9 l~fpvl-~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+.|-.+ .|..+++++.||+...|+..+++ | ..+|.|... .+.+...+++++.
T Consensus 65 v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~~--g----~~~~~G~~~-----------~~~l~~fv~~~l~ 117 (243)
T 2hls_A 65 LKLNVYYRESDSDKFSEFKVERVPTVAFLG--G----EVRWTGIPA-----------GEEIRALVEVIMR 117 (243)
T ss_dssp EEEEEEETTTTHHHHHHTTCCSSSEEEETT--T----TEEEESCCC-----------TTHHHHHHHHHHH
T ss_pred eEEEEecCCcCHHHHHhcCCCcCCEEEEEC--C----ceeEcCCCc-----------HHHHHHHHHHHHh
Confidence 555332 35678899999999999999884 4 278998732 1356666666553
No 250
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=85.08 E-value=2.3 Score=31.04 Aligned_cols=46 Identities=17% Similarity=0.325 Sum_probs=34.1
Q ss_pred hhHHHHHhCCc--ccceEEEEeCCCC-CceeEEE--eecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 18 SQDVARDFGAA--CTPEFFLFKKDGR-RPFQLVY--HGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 18 ~~~vA~~yga~--~tP~~fliD~~G~-~~v~~~Y--~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
..+++++|+++ ..||.+++. |+ .. ...| .|.. +...|.+.|+..+.
T Consensus 82 n~~la~~~~V~~~~~PTl~~F~--G~~~~-~~~y~~~G~~-----------~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 82 NKALGDRYKVDDKNFPSIFLFK--GNADE-YVQLPSHVDV-----------TLDNLKAFVSANTP 132 (248)
T ss_dssp THHHHHHTTCCTTSCCEEEEES--SSSSS-EEECCTTSCC-----------CHHHHHHHHHHHSS
T ss_pred cHHHHHHhCCCcCCCCeEEEEe--CCcCc-ceeecccCCC-----------CHHHHHHHHHHhhc
Confidence 67899999999 999999997 74 11 3556 5542 35678888887654
No 251
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=84.73 E-value=2.4 Score=30.67 Aligned_cols=46 Identities=20% Similarity=0.397 Sum_probs=32.9
Q ss_pred hhHHHHHhCCc--ccceEEEEeCCCC-CceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 18 SQDVARDFGAA--CTPEFFLFKKDGR-RPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 18 ~~~vA~~yga~--~tP~~fliD~~G~-~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
..+++++|+++ ..|+.+++. +|+ .. ...|.|..+ ...|.+.|+...
T Consensus 70 ~~~l~~~~~V~~~~~PTl~~f~-~G~~~~-~~~y~G~~~-----------~~~L~~fi~~~~ 118 (240)
T 2qc7_A 70 NMELSEKYKLDKESYPVFYLFR-DGDFEN-PVPYTGAVK-----------VGAIQRWLKGQG 118 (240)
T ss_dssp SHHHHHHTTCCGGGCSEEEEEE-TTCSSC-CEECCSCSC-----------HHHHHHHHHHTT
T ss_pred hHHHHHHcCCCCCCCCEEEEEe-CCCcCc-ceeecCCCC-----------HHHHHHHHHHhc
Confidence 68899999999 999999995 453 11 357777532 456777666653
No 252
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=82.23 E-value=1.5 Score=28.17 Aligned_cols=40 Identities=13% Similarity=0.293 Sum_probs=26.9
Q ss_pred ccceeE-EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 8 FLMWLI-TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 8 ~l~fpv-l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
++.|-. =.|.+.+++.+||.+ +|+.+++. +| +....|.++
T Consensus 58 ~i~~~~vDId~d~~l~~~ygv~-VP~l~~~~-dG----~~v~~g~~~ 98 (107)
T 2fgx_A 58 WFELEVINIDGNEHLTRLYNDR-VPVLFAVN-ED----KELCHYFLD 98 (107)
T ss_dssp CCCCEEEETTTCHHHHHHSTTS-CSEEEETT-TT----EEEECSSCC
T ss_pred CCeEEEEECCCCHHHHHHhCCC-CceEEEEE-CC----EEEEecCCC
Confidence 355543 245678999999997 99986553 57 344567754
No 253
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=82.13 E-value=2.7 Score=28.51 Aligned_cols=52 Identities=15% Similarity=0.344 Sum_probs=31.7
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeec-CCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ-FDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~-idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.+.+.++++|+..||+++| +|+ ..-.|. +... . .......+.+.|+.|++.+
T Consensus 133 ~~~~~a~~~gv~GtPt~~v---ng~----~~v~~~~~~~~-~---~~~~~~~~~~~i~~Li~k~ 185 (189)
T 3l9v_A 133 LQERLFKEYGVRGTPSVYV---RGR----YHINNAAFGAF-S---VENFRSRYAAVVRKLLAGN 185 (189)
T ss_dssp HHHHHHHHTTCCSSSEEEE---TTT----EEECGGGCCCS-S---HHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHhCCCccCEEEE---CCE----EEECccccccc-c---ccchHHHHHHHHHHHHhCC
Confidence 4557789999999999997 574 333443 2211 0 0001257888899888754
No 254
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=81.96 E-value=0.93 Score=32.06 Aligned_cols=33 Identities=12% Similarity=0.351 Sum_probs=25.9
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCC
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFD 53 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~id 53 (101)
...+++.|++..+|+.+++. +|+ +.-+|.|..+
T Consensus 161 ~~~l~~~~~i~~~PTl~~~~-~G~--~v~~~~G~~~ 193 (217)
T 2trc_P 161 NTGAGDRFSSDVLPTLLVYK-GGE--LISNFISVAE 193 (217)
T ss_dssp HHTCSTTSCGGGCSEEEEEE-TTE--EEEEETTGGG
T ss_pred cHHHHHHCCCCCCCEEEEEE-CCE--EEEEEeCCcc
Confidence 45678899999999999996 785 4557888754
No 255
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=81.83 E-value=0.99 Score=31.59 Aligned_cols=29 Identities=7% Similarity=0.285 Sum_probs=25.3
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCCCC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKDGR 41 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~G~ 41 (101)
|=.|+.++++++||++..||.+++.+.+.
T Consensus 87 vD~d~~~~la~~~~I~siPtl~~F~~g~~ 115 (178)
T 3ga4_A 87 VDVNEVPQLVKDLKLQNVPHLVVYPPAES 115 (178)
T ss_dssp EETTTCHHHHHHTTCCSSCEEEEECCCCG
T ss_pred EECccCHHHHHHcCCCCCCEEEEEcCCCC
Confidence 44678999999999999999999998663
No 256
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=80.92 E-value=3.8 Score=28.01 Aligned_cols=52 Identities=21% Similarity=0.416 Sum_probs=30.1
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.+.+.|+++|+..||++|| +|+ ..+.-.| +.... ......++.+.|+.|++.
T Consensus 139 ~~~~~a~~~gv~gtPtfvv---nG~--~~v~~~~-~~~~~----~~~~~~~~~~~i~~L~~k 190 (191)
T 3l9s_A 139 QQEKAAADLQLQGVPAMFV---NGK--YQINPQG-MDTSS----MDVFVQQYADTVKYLVDK 190 (191)
T ss_dssp HHHHHHHHTTCCSSSEEEE---TTT--EEECGGG-SCCSS----HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCcccCEEEE---CCE--EEECccc-cCCcc----chhhHHHHHHHHHHHHcC
Confidence 4567789999999999987 574 1222122 22110 000124677788888754
No 257
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=80.08 E-value=2.2 Score=29.75 Aligned_cols=47 Identities=19% Similarity=0.263 Sum_probs=31.5
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
+.+.|+++|+..||++ +||.+|+ -..+.|. + ....++++|.....|.
T Consensus 171 ~~~~a~~~gv~G~Ptf-vv~~~g~---~~~~~G~-~----------~~~~l~~~l~~~~~~~ 217 (226)
T 1r4w_A 171 TTGAACKYGAFGLPTT-VAHVDGK---TYMLFGS-D----------RMELLAYLLGEKWMGP 217 (226)
T ss_dssp HHHHHHHTTCCSSCEE-EEEETTE---EEEEEST-T----------CHHHHHHHHTCCCCCS
T ss_pred HHHHHHHCCCCCCCEE-EEeCCCC---cCceeCC-C----------cHHHHHHHhcCcccCC
Confidence 4566889999999996 6676662 2356675 2 1467777777655553
No 258
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=79.22 E-value=4 Score=27.74 Aligned_cols=42 Identities=17% Similarity=0.201 Sum_probs=30.4
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
+.+.|+++|+..||+++| +| + .+.|. + ....++++|++..+.
T Consensus 156 ~~~~a~~~Gv~G~Ptfvi---~g----~-~~~G~-~----------~~~~l~~~l~~~~~~ 197 (203)
T 2imf_A 156 QTHAAIERKVFGVPTMFL---GD----E-MWWGN-D----------RLFMLESAMGRLCRQ 197 (203)
T ss_dssp HHHHHHHTTCCSSSEEEE---TT----E-EEESG-G----------GHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCcCCEEEE---CC----E-EEECC-C----------CHHHHHHHHhccccc
Confidence 456688999999999777 46 3 56787 2 146788888876644
No 259
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=77.75 E-value=2.6 Score=29.84 Aligned_cols=48 Identities=19% Similarity=0.225 Sum_probs=33.3
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
.+.+.|+++|+..+|+.+| +.+|+ ...|-|. |. ...++++|+....|.
T Consensus 170 ~~~~~a~~~Gv~GvPtfvv-~~~g~---~~~f~G~-dr----------l~~l~~~L~~~~~~p 217 (234)
T 3rpp_A 170 ETTEAACRYGAFGLPITVA-HVDGQ---THMLFGS-DR----------MELLAHLLGEKWMGP 217 (234)
T ss_dssp HHHHHHHHTTCSSSCEEEE-EETTE---EEEEESS-SC----------HHHHHHHHTCCCCCS
T ss_pred HHHHHHHHcCCCCCCEEEE-eCCCC---cCceeCc-cC----------HHHHHHHhccccCCC
Confidence 3456678899999999866 66773 3678886 32 457777776655553
No 260
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=72.05 E-value=1.3 Score=32.55 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=29.0
Q ss_pred EEEeChhHHHHHhCCcccceEEEEeCC-CCCceeEEEeecC
Q 034203 13 ITLFQSQDVARDFGAACTPEFFLFKKD-GRRPFQLVYHGQF 52 (101)
Q Consensus 13 vl~D~~~~vA~~yga~~tP~~fliD~~-G~~~v~~~Y~G~i 52 (101)
+-.|.+...++.|++...|+.+++++. |+ ...+|.|..
T Consensus 305 ~~vd~~~~~~~~~~v~~~Pt~~~~~~~~~~--~~~~~~G~~ 343 (361)
T 3uem_A 305 AKMDSTANEVEAVKVHSFPTLKFFPASADR--TVIDYNGER 343 (361)
T ss_dssp EEEETTTCBCSSCCCCSSSEEEEECSSSSC--CCEECCSCS
T ss_pred EEEECCccchhhcCCcccCeEEEEECCCCc--ceeEecCCC
Confidence 456777666889999999999999766 33 357788863
No 261
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=67.02 E-value=7.3 Score=30.38 Aligned_cols=52 Identities=6% Similarity=0.058 Sum_probs=40.7
Q ss_pred hHHHHHh---CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDF---GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~y---ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.| |--+|-+...+|++| .+.+.||.||.....+..+.-.+++++|.+
T Consensus 408 ~~t~~~f~~~g~~~TGDl~~~~~dG----~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~ 462 (548)
T 2d1s_A 408 EATKELIDEEGWLHTGDIGYYDEEK----HFFIVDRLKSLIKYKGYQVPPAELESVLLQ 462 (548)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTC----CEEEEEEGGGCBCBTTCCBCHHHHHHHHHT
T ss_pred HHhhhcccCCcEEEccCEEEEcCCC----eEEEeccccceEEECCEEECHHHHHHHHHh
Confidence 4456666 345799999999999 599999999987766677777888887764
No 262
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=66.86 E-value=9 Score=30.04 Aligned_cols=38 Identities=16% Similarity=0.160 Sum_probs=27.5
Q ss_pred cccee-EEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecC
Q 034203 8 FLMWL-ITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (101)
Q Consensus 8 ~l~fp-vl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~i 52 (101)
.+.|- +=.|..++++++||+..+|+.|+ +| +.+..|+.
T Consensus 148 ~v~~~~vd~~~~~~~~~~~~i~svPt~~i---~g----~~~~~G~~ 186 (521)
T 1hyu_A 148 RIKHTAIDGGTFQNEITERNVMGVPAVFV---NG----KEFGQGRM 186 (521)
T ss_dssp TEEEEEEETTTCHHHHHHTTCCSSSEEEE---TT----EEEEESCC
T ss_pred ceEEEEEechhhHHHHHHhCCCccCEEEE---CC----EEEecCCC
Confidence 44443 22357789999999999999988 77 45566763
No 263
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=65.25 E-value=2.5 Score=25.70 Aligned_cols=20 Identities=25% Similarity=0.519 Sum_probs=16.0
Q ss_pred hHHHHHhCCcccceEEEEeCCCC
Q 034203 19 QDVARDFGAACTPEFFLFKKDGR 41 (101)
Q Consensus 19 ~~vA~~yga~~tP~~fliD~~G~ 41 (101)
.++++.||+..+|+.|+ +|+
T Consensus 63 ~~l~~~~~v~~~Pt~~~---~g~ 82 (116)
T 2e7p_A 63 SALAHWTGRGTVPNVFI---GGK 82 (116)
T ss_dssp HHHHHHHSCCSSCEEEE---TTE
T ss_pred HHHHHHhCCCCcCEEEE---CCE
Confidence 46999999999999953 573
No 264
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=62.81 E-value=4.5 Score=27.66 Aligned_cols=17 Identities=29% Similarity=0.583 Sum_probs=14.9
Q ss_pred hHHHHHhCCcccceEEE
Q 034203 19 QDVARDFGAACTPEFFL 35 (101)
Q Consensus 19 ~~vA~~yga~~tP~~fl 35 (101)
.+.|+++|+..||++||
T Consensus 144 ~~~a~~~GV~gtPtf~i 160 (182)
T 3gn3_A 144 TKYARQNGIHVSPTFMI 160 (182)
T ss_dssp HHHHHHHTCCSSSEEEE
T ss_pred HHHHHHCCCCccCEEEE
Confidence 36789999999999987
No 265
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=62.42 E-value=11 Score=30.29 Aligned_cols=52 Identities=21% Similarity=0.171 Sum_probs=41.1
Q ss_pred hHHHHHh-----CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDF-----GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~y-----ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.| |.-+|-+..-+|.+| .+.+.||.||.....+..+.-.+++.+|.+
T Consensus 491 ~~~~~~~~~~~~g~y~TGDlg~~d~dG----~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~ 547 (663)
T 1ry2_A 491 DRYLDTYLNPYPGYYFTGDGAAKDKDG----YIWILGRVDDVVNVSGHRLSTAEIEAAIIE 547 (663)
T ss_dssp HHHHHHHTSSSTTSEEEEEEEEECTTC----CEEECSCTTSCBCSSSCCBCHHHHHHHHHS
T ss_pred HHHHHhhhcCCCCEEEcCCEEEEcCCC----CEEEEeecCCEEEECCEEcCHHHHHHHHHh
Confidence 3455555 356899999999999 599999999987766777788888888764
No 266
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=62.32 E-value=5.9 Score=29.63 Aligned_cols=27 Identities=22% Similarity=0.521 Sum_probs=21.7
Q ss_pred hhHHHHHhCCcccceEEEEeCCCCCceeEEEeecC
Q 034203 18 SQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQF 52 (101)
Q Consensus 18 ~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~i 52 (101)
..+++++||++..||.|+ +|+ +|.|..
T Consensus 240 ~~~la~~~gI~~vPT~~i---~G~-----~~~G~~ 266 (291)
T 3kp9_A 240 QAQECTEAGITSYPTWII---NGR-----TYTGVR 266 (291)
T ss_dssp CCHHHHTTTCCSTTEEEE---TTE-----EEESCC
T ss_pred HHHHHHHcCCcccCeEEE---CCE-----EecCCC
Confidence 689999999999999555 683 388864
No 267
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=62.24 E-value=3.3 Score=32.45 Aligned_cols=53 Identities=21% Similarity=0.203 Sum_probs=23.5
Q ss_pred hhHHHHHhC-----------CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 18 SQDVARDFG-----------AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 18 ~~~vA~~yg-----------a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
....+++|- --+|-+..-+|.+| .+.+.||.||....++..+.-.++|++|.+
T Consensus 427 ~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~d~dG----~l~~~GR~~d~Ik~~G~~v~p~eIE~~l~~ 490 (570)
T 4gr5_A 427 PALTAERFVADPFAGPGGERMYRTGDLARRRADG----VLEYVGRADDQVKIRGFRVEPGEVEARLVG 490 (570)
T ss_dssp HHHHHHHEEECTTCCSSCCEEEEEEEEEEECTTS----CEEEEEC-----------------------
T ss_pred chhhhcccccCCCCCCCCCEEEeCCCeEEECCCC----eEEEEcccCCEEEECcEEeCHHHHHHHHhc
Confidence 345667772 35788999999999 599999999977665555556677766654
No 268
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=60.96 E-value=6.6 Score=30.11 Aligned_cols=52 Identities=19% Similarity=0.232 Sum_probs=36.2
Q ss_pred hHHHHHh------CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDF------GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~y------ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.| |--+|-+...+|.+| .+.+.||.||.....+..+.-.+++++|.+
T Consensus 367 ~~t~~~f~~~~~~~~~~TGDlg~~d~dG----~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 424 (521)
T 3l8c_A 367 EKTAEAFFTFKGQPAYHTGDIGSLTEDN----ILLYGGRLDFQIKYAGYRIELEDVSQQLNQ 424 (521)
T ss_dssp HHHHHHEEEETTEEEEEEEEEEEECSSS----CEEEEEEGGGBCC-----CBHHHHHHHHHT
T ss_pred hHhhccCcCCCCceeeeCCCEEEEeCCC----eEEEeCcccceEeECCEEeCHHHHHHHHHc
Confidence 3455655 235789999999999 589999999987766666777788877764
No 269
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=59.85 E-value=7.6 Score=30.13 Aligned_cols=51 Identities=18% Similarity=0.238 Sum_probs=38.7
Q ss_pred hHHHHHhC---CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHH
Q 034203 19 QDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (101)
Q Consensus 19 ~~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~ 73 (101)
...++.|. --+|-+..-+|++| .+.|.||.||.....+..+.-.++|++|.
T Consensus 397 ~~t~~~f~~~g~~~TGDlg~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 450 (539)
T 1mdb_A 397 EHNAASFTEDGFYRTGDIVRLTRDG----YIVVEGRAKDQINRGGEKVAAEEVENHLL 450 (539)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTS----CEEEEEEGGGCEECSSCEECHHHHHHHHT
T ss_pred hhhhhhccCCCCeecCceEEECCCC----cEEEeccccceEEECCEEECHHHHHHHHH
Confidence 34566663 45799999999999 59999999998766666666777777664
No 270
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=59.39 E-value=13 Score=28.86 Aligned_cols=52 Identities=13% Similarity=0.203 Sum_probs=37.3
Q ss_pred EEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 14 TLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 14 l~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
+.|..+.++++||+. ....+|+-++| -+.+++.- . .. -....|++++.++|.
T Consensus 483 ~~d~~~~~~~~~~~~-~~~~~lvRPD~----~va~r~~~--~-~~----~~~~~l~~~~~~~l~ 534 (535)
T 3ihg_A 483 LTDPESAVSERYGIG-KAGASLVRPDG----IVAWRTDE--A-AA----DAAQTLEGVLRRVLD 534 (535)
T ss_dssp BBCSSCCHHHHHTCT-TTCEEEECTTS----BEEEEESS--C-CS----SHHHHHHHHHHHHTT
T ss_pred cccCcchHHHHhCCC-CCceEeeCCCc----eeEEecCC--C-CC----CHHHHHHHHHHHHhc
Confidence 457788889999876 35589999999 46677651 1 11 135689999999884
No 271
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=59.36 E-value=5.8 Score=30.87 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=24.9
Q ss_pred hHHHHHhC---CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.|. --+|-+..-+|++| .+.+.||.||.....+..+.-.++|++|.+
T Consensus 406 ~~t~~~f~~~g~~~TGDlg~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 460 (544)
T 3o83_A 406 EHNSQVFDEDNYYYSGDLVQRTPDG----NLRVVGRIKDQINRGGEKIASEEIEKLILL 460 (544)
T ss_dssp HHHHHHBCTTCCEEEEEEEEECTTS----CEEEEEEEC---------------------
T ss_pred hhhhhhCCCCCCeEcCCEEEEcCCC----CEEEEeecCCEEEeCCEEECHHHHHHHHHh
Confidence 35566662 45789999999999 599999999977655555555666666654
No 272
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=58.62 E-value=6.4 Score=30.49 Aligned_cols=52 Identities=10% Similarity=0.132 Sum_probs=39.6
Q ss_pred hHHHHHhC---CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.|. --+|-+..-+|.+| .+.+.||.||.....+..+.-.++|++|.+
T Consensus 401 ~~t~~~~~~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 455 (536)
T 3ni2_A 401 EATSRTIDKEGWLHTGDIGYIDDDD----ELFIVDRLKELIKYKGFQVAPAELEALLIA 455 (536)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTS----CEEEEEECSCCEEETTEEECHHHHHHHHHT
T ss_pred hHHHhhccCCCceEcccEEEEcCCc----eEEEEecccceEEECCEEECHHHHHHHHHh
Confidence 45566663 45899999999999 599999999876656666667788877654
No 273
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=57.89 E-value=40 Score=23.02 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=39.3
Q ss_pred cceeEEEeC----hhHHHHHhCCc--ccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCC
Q 034203 9 LMWLITLFQ----SQDVARDFGAA--CTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQ 79 (101)
Q Consensus 9 l~fpvl~D~----~~~vA~~yga~--~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~ 79 (101)
+.| +..|. .+.+++.||.. ..|...+++..+. ..|.=. .+ ..+...+++-++.+++|+
T Consensus 164 i~F-~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~----~ky~~~-~~-------~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 164 ILF-ILVDSGMKENGKVISFFKLKESQLPALAIYQTLDD----EWDTLP-TA-------EVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp CEE-EEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSC----CEEEET-TC-------CCCHHHHHHHHHHHHTTC
T ss_pred EEE-EEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCC----ccccCC-cC-------CCCHHHHHHHHHHHhCCC
Confidence 444 44565 35688999987 7899999996652 223211 11 135788999999999986
No 274
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=56.57 E-value=21 Score=25.43 Aligned_cols=38 Identities=8% Similarity=0.068 Sum_probs=29.6
Q ss_pred cceeEEEeChhHHHHHhCCcc---------cceEEEEeCCCCCceeEEEeec
Q 034203 9 LMWLITLFQSQDVARDFGAAC---------TPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 9 l~fpvl~D~~~~vA~~yga~~---------tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
..++.|-|.++++++++|... ..-++||| +| ++.|...
T Consensus 133 ~~i~~laD~~~eftkalGl~~~~~~gg~RS~Rya~IVd-DG----vV~~~~v 179 (199)
T 4h86_A 133 THIKFASDPGCAFTKSIGFELAVGDGVYWSGRWAMVVE-NG----IVTYAAK 179 (199)
T ss_dssp SSEEEEECGGGHHHHHTTCEEEEETTEEEECSEEEEEE-TT----EEEEEEE
T ss_pred ccccccCCcchHHHHhcCceeecCCCcceeeEEEEEEE-CC----EEEEEEE
Confidence 458889999999999999743 34578998 88 5777654
No 275
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=56.53 E-value=7.8 Score=21.93 Aligned_cols=17 Identities=24% Similarity=0.647 Sum_probs=14.5
Q ss_pred hHHHHHhC--CcccceEEE
Q 034203 19 QDVARDFG--AACTPEFFL 35 (101)
Q Consensus 19 ~~vA~~yg--a~~tP~~fl 35 (101)
.++++.|| +..+|+.|+
T Consensus 46 ~~l~~~~~~~~~~vP~i~~ 64 (85)
T 1ego_A 46 EDLQQKAGKPVETVPQIFV 64 (85)
T ss_dssp HHHHHHTCCCSCCSCEEEE
T ss_pred HHHHHHhCCCCceeCeEEE
Confidence 37999999 899999864
No 276
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=55.15 E-value=4.3 Score=32.57 Aligned_cols=43 Identities=14% Similarity=0.119 Sum_probs=34.0
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
-+|-+..-+|++| .+.|.||.||.....+..+.-.++|.+|.+
T Consensus 398 yrTGDl~~~~~dG----~l~~~GR~dd~Ik~~G~ri~~~eIE~~l~~ 440 (620)
T 4dg8_A 398 YRTGDRARYDEQG----RLRFIGRGDGQVKLNGYRLDLPALEQRFRR 440 (620)
T ss_dssp EEEEEEEEECTTS----CEEEEECSSSEEEETTEEEEHHHHHHHHHT
T ss_pred EeCCCEEEECCCC----eEEEEccCCCEEEECCEEcCHHHHHHHHHh
Confidence 5788888999999 599999999876655655666777777664
No 277
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=54.49 E-value=24 Score=23.89 Aligned_cols=27 Identities=22% Similarity=0.320 Sum_probs=20.4
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeec
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
.+.+.|+++|+..||+++| +| + .+.|.
T Consensus 161 ~~~~~a~~~Gv~GvPtfvv---~g----~-~~~G~ 187 (202)
T 3fz5_A 161 KIGEDAVARGIFGSPFFLV---DD----E-PFWGW 187 (202)
T ss_dssp HHHHHHHHTTCCSSSEEEE---TT----E-EEESG
T ss_pred HHHHHHHHCCCCcCCEEEE---CC----E-EEecC
Confidence 3456778999999999887 56 2 56776
No 278
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=53.76 E-value=5.5 Score=31.59 Aligned_cols=52 Identities=15% Similarity=0.262 Sum_probs=39.1
Q ss_pred hHHHHHhC---CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...+++|. --+|-+..-+|++| .+.|.||.||.....+..+.-.++|.+|.+
T Consensus 401 ~~t~~~f~~~~~yrTGDl~~~~~dG----~l~~~GR~dd~iki~G~ri~~~eIE~~l~~ 455 (617)
T 3rg2_A 401 QHNASAFDANGFYCSGDLISIDPEG----YITVQGREKDQINRGGEKIAAEEIENLLLR 455 (617)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTS----CEEEEEECSSEEEETTEEEEHHHHHHHHTT
T ss_pred hhhhhccCCCCceecCceEEEcCCc----eEEEEeecCCEEEECCEEeCHHHHHHHHHh
Confidence 45677773 35799999999999 599999999976655555666777776654
No 279
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=53.23 E-value=22 Score=24.36 Aligned_cols=20 Identities=25% Similarity=0.380 Sum_probs=16.0
Q ss_pred eChhHHHHHhCCcccceEEE
Q 034203 16 FQSQDVARDFGAACTPEFFL 35 (101)
Q Consensus 16 D~~~~vA~~yga~~tP~~fl 35 (101)
+.....++.+|+..||+++|
T Consensus 37 ~~~~~~a~~~gi~gvP~fvi 56 (197)
T 1un2_A 37 AQQEKAAADVQLRGVPAMFV 56 (197)
T ss_dssp HHHHHHHHHTTCCSSSEEEE
T ss_pred HHHHHHHHHcCCCcCCEEEE
Confidence 34567789999999998755
No 280
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=52.75 E-value=10 Score=29.14 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=26.0
Q ss_pred HhCCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHH
Q 034203 24 DFGAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVL 76 (101)
Q Consensus 24 ~yga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alL 76 (101)
.|++..+||.+++ ++|+..-..+|.|.. +...+.+.|+..+
T Consensus 426 ~~~v~~~Pt~~~~-~~G~~~~~~~~~G~~-----------~~~~l~~~i~~~~ 466 (504)
T 2b5e_A 426 GVVIEGYPTIVLY-PGGKKSESVVYQGSR-----------SLDSLFDFIKENG 466 (504)
T ss_dssp SCCCSSSSEEEEE-CCTTSCCCCBCCSCC-----------CHHHHHHHHHHHC
T ss_pred cCCceecCeEEEE-eCCceecceEecCCC-----------CHHHHHHHHHhcC
Confidence 3999999999999 677410034566653 2455666666553
No 281
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=52.33 E-value=7.6 Score=30.15 Aligned_cols=44 Identities=11% Similarity=0.194 Sum_probs=18.3
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
-+|-+..-+|.+| .+.+.||.||.....+..+.-.++|++|.++
T Consensus 406 ~~TGDlg~~d~dG----~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~ 449 (562)
T 3ite_A 406 YRTGDIVRMDADS----SILFLGRKDEQVKVRGQRLELGEVSEVIRSL 449 (562)
T ss_dssp EEEEEEEEECTTS----CEEEEEEC-----------------------
T ss_pred EecCCEEEEcCCC----eEEEEccccCEEeECcEEECHHHHHHHHHhc
Confidence 4688888899999 5999999999876666566666777776553
No 282
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=51.68 E-value=8.5 Score=29.88 Aligned_cols=52 Identities=6% Similarity=0.067 Sum_probs=20.7
Q ss_pred hHHHHHh---CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDF---GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~y---ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.| |--+|-+..-+|.+| .+.+.||.||.....+..+.-.+++++|.+
T Consensus 406 ~~t~~~~~~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 460 (550)
T 3rix_A 406 EATNALIDKDGWLHSGDIAYWDEDE----HFFIVDRLKSLIKYKGYQVAPAELESILLQ 460 (550)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTC----CEEEC-------------------------
T ss_pred hhhhhhcCCCCCeecCcEEEEeCCc----eEEEEecchheeEECCEEECHHHHHHHHHh
Confidence 3455556 345899999999999 599999999976655555555666666554
No 283
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=51.45 E-value=4.7 Score=29.90 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=37.8
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCC
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPV 81 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v 81 (101)
-+|-+..-+|.+| +.|.||.||.....+..+.-.++|+.|.+++....|
T Consensus 230 ~~TGDlg~~d~~g-----~~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~p~V 278 (358)
T 4gs5_A 230 VQTNDLVEIHGNA-----FQWIGRADNVINSGGVKIVLDQIDQRIAAVFHHLNI 278 (358)
T ss_dssp EEEEEEEEECSSE-----EEEEEEGGGEEEETTEEEEHHHHHHHHHHHHHHHTC
T ss_pred eecCCccccccCc-----eEEcccccCeEEECCEEECHHHHHHHHHHhccCCCc
Confidence 4688888999877 678899998766566667788999998887654443
No 284
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=51.14 E-value=8.9 Score=29.47 Aligned_cols=52 Identities=15% Similarity=0.175 Sum_probs=39.2
Q ss_pred hHHHHHhC---CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...+++|. --+|-+..-+|++| .+.|.||.||.....+..+.-.++|++|.+
T Consensus 366 ~~t~~~f~~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 420 (503)
T 4fuq_A 366 EKTKSEFRDDGFFITGDLGKIDERG----YVHILGRGKDLVITGGFNVYPKEIESEIDA 420 (503)
T ss_dssp HHHHHTBCTTSCEEEEEEEEECTTC----EEEECCSSTTCEEETTEEECHHHHHHHHHT
T ss_pred hhhHhhhCCCCCeEcceeEEEcCCC----cEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 44566663 35799999999999 699999999876655656667788877754
No 285
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=51.11 E-value=8.6 Score=29.85 Aligned_cols=43 Identities=7% Similarity=0.114 Sum_probs=23.7
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
-+|-+..-+|++| .+.|.||.||.....+..+.-.++|++|.+
T Consensus 418 ~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 460 (549)
T 3g7s_A 418 FRTGDVGFIDEEG----FLHFQDRVKEVIKYKGYTIAPFELEALLMK 460 (549)
T ss_dssp EEEEEEEEECTTS----CEEEEEEC------------CHHHHHHHTT
T ss_pred EccCcEEEEcCCc----eEEEeccccceEEECCEEECHHHHHHHHHh
Confidence 4688888899999 599999999976655555555666665543
No 286
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=50.36 E-value=10 Score=28.93 Aligned_cols=43 Identities=12% Similarity=0.013 Sum_probs=33.9
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
-+|-+..-+|.+| .+.+.||.||....++..+.-.+++++|.+
T Consensus 377 ~~TGDl~~~~~~G----~l~~~GR~dd~ik~~G~~v~p~eiE~~l~~ 419 (501)
T 3ipl_A 377 FNTGDIAEIDHEG----YVMIYDRRKDLIISGGENIYPYQIETVAKQ 419 (501)
T ss_dssp EEEEEEEEECTTS----CEEEEEECCCCEECSSCEECHHHHHHHHTT
T ss_pred eecCCEEEEcCCC----eEEEEccccceEEECCEEECHHHHHHHHHh
Confidence 4688888999999 599999999977666666677777776653
No 287
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=49.30 E-value=13 Score=28.62 Aligned_cols=51 Identities=16% Similarity=0.203 Sum_probs=34.7
Q ss_pred hHHHHHh--CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHH
Q 034203 19 QDVARDF--GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (101)
Q Consensus 19 ~~vA~~y--ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~ 73 (101)
...++.| |--.|-+..-+|++| .+.+.||.||.....+..+.-.+++++|.
T Consensus 397 ~~t~~~f~~~~~~TGDl~~~~~~G----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 449 (529)
T 2v7b_A 397 EKSRATFLGEWIRSGDKYCRLPNG----CYVYAGRSDDMLKVSGQYVSPVEVEMVLV 449 (529)
T ss_dssp HHHHHHEETTEEEEEEEEEECTTS----CEEEEEEGGGCBC----CBCHHHHHHHHT
T ss_pred HHHHHhhhcCCcccCceEEECCCc----cEEEeCccCCeEEECCEEECHHHHHHHHH
Confidence 3445555 234788889999999 59999999998766666666677776654
No 288
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.93 E-value=28 Score=23.83 Aligned_cols=34 Identities=18% Similarity=0.145 Sum_probs=23.8
Q ss_pred HHHHH---hCCcccceEEEEeCCCCC-ceeEEEeecCC
Q 034203 20 DVARD---FGAACTPEFFLFKKDGRR-PFQLVYHGQFD 53 (101)
Q Consensus 20 ~vA~~---yga~~tP~~fliD~~G~~-~v~~~Y~G~id 53 (101)
.++.. |++...|...+|+++|.+ .+.-+..|.++
T Consensus 118 ~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~ 155 (178)
T 2ec4_A 118 VVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTT 155 (178)
T ss_dssp HHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCC
T ss_pred HHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCC
Confidence 45544 899999999999988632 24455677643
No 289
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=48.65 E-value=9.5 Score=30.56 Aligned_cols=45 Identities=16% Similarity=0.098 Sum_probs=36.5
Q ss_pred CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 26 GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 26 ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
|--+|-+..-+|.+| .+.+.||.||.....+..+.-.+++.+|.+
T Consensus 494 g~y~TGDlg~~d~dG----~l~i~GR~dd~Ik~~G~rI~~~eIE~~l~~ 538 (652)
T 1pg4_A 494 NMYFSGDGARRDEDG----YYWITGRVDDVLNVSGHRLGTAEIESALVA 538 (652)
T ss_dssp TSEEEEEEEEECTTS----CEEEEEESSSEEEETTEEEEHHHHHHHHHH
T ss_pred CEEECCcEEEEcCCC----cEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 356899999999999 599999999876655666677888888865
No 290
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=48.34 E-value=29 Score=26.41 Aligned_cols=74 Identities=9% Similarity=0.150 Sum_probs=47.3
Q ss_pred hhhcccceeEEEeChhHHHHHhC-----CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 4 ELYLFLMWLITLFQSQDVARDFG-----AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 4 ~~~~~l~fpvl~D~~~~vA~~yg-----a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
+++....--|..=..|.+-|..- =..=|-+.++|.+|+ +.+---|.= . .-|+|...|.++|.+
T Consensus 50 ~~f~~~d~iIfI~A~GIvVR~IAPll~dK~~DPaVvvvDe~G~--~vIpLLsGH---------~-GAN~LA~~IA~~lga 117 (336)
T 3eeq_A 50 TIWKCYDAIVFVMALEGATRIVCKYAKSKTEDPAIVCIDDKIN--YVIPLLGGH---------W-GANDIARELSVILNS 117 (336)
T ss_dssp HHTTTCSEEEEESCHHHHHHHHHHHCCCTTTCCEEEEECTTCC--EEEEEECTT---------T-THHHHHHHHHHHTTC
T ss_pred HHhcCCCeEEEEeChHHHHHHhCchhccCCCCCCEEEEeCCCC--EEEEeccCc---------h-hHHHHHHHHHHHhCC
Confidence 44444454555556666655543 235799999999997 555444431 1 368999999999999
Q ss_pred CCCCCCCCCCC
Q 034203 79 QPVSSNQKPSV 89 (101)
Q Consensus 79 ~~v~~~~t~~~ 89 (101)
.+|-+..|...
T Consensus 118 ~pVITTAtD~~ 128 (336)
T 3eeq_A 118 TPIITTAAEIK 128 (336)
T ss_dssp EECCC------
T ss_pred EEEEeCchhhc
Confidence 99998888765
No 291
>2ia7_A Tail lysozyme, putative; NP_952040.1, putative tail lysozyme, structural genomics, JO center for structural genomics, JCSG; 1.44A {Geobacter sulfurreducens} SCOP: d.373.1.1
Probab=47.30 E-value=19 Score=23.30 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCCCcceee
Q 034203 64 TGRDIRLAIECVLSGQPVSSNQKPSVGCSIK 94 (101)
Q Consensus 64 ~~~~L~~AI~alLag~~v~~~~t~~~GC~I~ 94 (101)
....++++|..+|..+.-.....+.+||.|.
T Consensus 30 ~~~~I~qsI~~iL~T~~G~r~~~pdyGs~l~ 60 (134)
T 2ia7_A 30 AEEDIAESIRIILGTARGERVMRPDFGCGIH 60 (134)
T ss_dssp HHHHHHHHHHHHHTCCTTSSTTCTTCSCGGG
T ss_pred cHHHHHHHHHHHHCCCCCCcccCcccCCCch
Confidence 3678999999999999988889999999874
No 292
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=46.71 E-value=14 Score=31.03 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=26.1
Q ss_pred hHHHHHhC---CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.|. --+|-+...+|++| .+.|.||.||.....+..+.-.++|.+|.+
T Consensus 448 ~~t~~~f~~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~ 502 (979)
T 3tsy_A 448 AATAETIDKDGWLHTGDIGLIDDDD----ELFIVDRLKELIKYKGFQVAPAELEALLIG 502 (979)
T ss_dssp HHHHHHBCTTSCEEEEEEEEECTTS----CEEEEEESCC--------------------
T ss_pred hhhhhhccCCCcEEcCCEEEEcCCc----eEEEecCCCCEEEECCEEECHHHHHHHHHh
Confidence 45666663 45899999999999 599999999976655555555666666554
No 293
>2w4l_A DCMP deaminse, deoxycytidylate deaminase; pyrimidine metabolism, nucleotide biosynthesis, zinc, hexamer, hydrolase, metal-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=44.98 E-value=20 Score=24.80 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=24.4
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCCCcceeeeeCCCC
Q 034203 64 TGRDIRLAIECVLSGQPVSSNQKPSVGCSIKWHPQTV 100 (101)
Q Consensus 64 ~~~~L~~AI~alLag~~v~~~~t~~~GC~I~~~~~~~ 100 (101)
...+|+.|++....+..+ .+++||-|..++|.+
T Consensus 13 d~~~M~~A~~~A~~s~~p----~~~VGAvIV~~dg~I 45 (178)
T 2w4l_A 13 PEYFMAVAFLSAQRSKDP----NSQVGACIVNSENKI 45 (178)
T ss_dssp HHHHHHHHHHHHTTCCCS----SCCCEEEEECTTSCE
T ss_pred HHHHHHHHHHHHHhcCCC----CCCEEEEEEecCCEE
Confidence 367899999876655432 789999999766654
No 294
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=43.92 E-value=8 Score=29.63 Aligned_cols=51 Identities=20% Similarity=0.261 Sum_probs=37.1
Q ss_pred hHHHHHh--CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHH
Q 034203 19 QDVARDF--GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (101)
Q Consensus 19 ~~vA~~y--ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~ 73 (101)
...++.| |--+|-+..-+|.+| .+.|.||.||.....+..+.-.++|++|.
T Consensus 370 ~~t~~~f~~g~~~TGDlg~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 422 (504)
T 1t5h_X 370 QATAEKLQDGWYRTSDVAVWTPEG----TVRILGRVDDMIISGGENIHPSEIERVLG 422 (504)
T ss_dssp HHHHHHEETTEEEEEEEEEECTTS----CEEEEEEGGGCEEETTEEECHHHHHHHHT
T ss_pred hhhhhhhcCCccccCcEEEECCCc----eEEEeCcccCEEEECCEEECHHHHHHHHH
Confidence 4556666 235788999999999 59999999987655555556667776654
No 295
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=40.84 E-value=12 Score=29.48 Aligned_cols=52 Identities=15% Similarity=0.142 Sum_probs=38.5
Q ss_pred hHHHHHh--CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDF--GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~y--ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.| |--+|.+..-+|.+| .+.|.||.||.....+..+.-.++|++|.+
T Consensus 424 ~~t~~~f~~~~~~TGDlg~~d~dG----~l~~~GR~dd~Ik~~G~~V~p~eIE~~l~~ 477 (570)
T 3c5e_A 424 DKTAANIRGDFWLLGDRGIKDEDG----YFQFMGRADDIINSSGYRIGPSEVENALME 477 (570)
T ss_dssp HHHHHTEETTEEEEEEEEEECTTS----CEEEEEEGGGCEEETTEEECHHHHHHHHHT
T ss_pred hHhhhhhcCCccccceeEEEcCCc----eEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 4455656 345789999999999 599999999976655655666777776654
No 296
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=39.53 E-value=72 Score=25.85 Aligned_cols=47 Identities=11% Similarity=0.162 Sum_probs=35.9
Q ss_pred hhHHHHHhCCcc-cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcC
Q 034203 18 SQDVARDFGAAC-TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSG 78 (101)
Q Consensus 18 ~~~vA~~yga~~-tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag 78 (101)
.+.+.+.||+.. ....+|+-++| -+-+++..++ ...|...++.++..
T Consensus 600 ~~~~~~~~g~~~~~g~~vlvRPD~----yV~~~~~~~~----------~~~l~~~~~~~~~~ 647 (665)
T 1pn0_A 600 HPKSYQAWGVDETKGAVVVVRPDG----YTSLVTDLEG----------TAEIDRYFSGILVE 647 (665)
T ss_dssp CCCHHHHHTBCTTTCEEEEECTTS----BEEEEECTTT----------HHHHHHHHHTTBCC
T ss_pred cccHHHHcCCCCCCceEEEECCCC----cEEEEecccc----------HHHHHHHHHHHhcC
Confidence 577999999875 67889999999 4667776543 46788888877754
No 297
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=39.42 E-value=17 Score=28.68 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=38.5
Q ss_pred hHHHHHhC--CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~yg--a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.|. --+|-+..-+|.+| .+.|.||.||.....+..+.-.++|.+|.+
T Consensus 443 ~~t~~~f~~gwy~TGDlg~~d~dG----~l~~~GR~dd~Ik~~G~~I~p~eIE~~l~~ 496 (580)
T 3etc_A 443 ERTEETWHDGYYHTGDMAWMDEDG----YLWFVGRADDIIKTSGYKVGPFEVESALIQ 496 (580)
T ss_dssp HHHHHHEETTEEEEEEEEEECTTS----CEEEEEESSSCEEETTEEECHHHHHHHHTT
T ss_pred hHHHhhcCCCEEecCcEEEECCCC----cEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 45566663 35789999999999 599999999976655555666777776653
No 298
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=38.31 E-value=80 Score=20.42 Aligned_cols=59 Identities=17% Similarity=0.177 Sum_probs=38.6
Q ss_pred cceeEEEe---ChhHHHHHhCCcc--cceEEEEeC--CCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 9 LMWLITLF---QSQDVARDFGAAC--TPEFFLFKK--DGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 9 l~fpvl~D---~~~~vA~~yga~~--tP~~fliD~--~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
+.|-++-. ..+.++..||... .|.+.+++. ++ ..|. ... ...+...+++-++..++|+-
T Consensus 65 i~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~-----~Ky~--~~~------~~~t~~~i~~Fv~d~l~GkL 130 (147)
T 3bj5_A 65 ILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEM-----TKYK--PES------EELTAERITEFCHRFLEGKI 130 (147)
T ss_dssp CEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSC-----EEEC--CSC------CCCCHHHHHHHHHHHHTTCS
T ss_pred eEEEEEecchHhHHHHHHHcCCCcccCCEEEEEeccccc-----ccCC--CCc------ccCCHHHHHHHHHHHHcCCc
Confidence 55544333 2236888999875 899999985 34 2343 111 12356789999999999963
No 299
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=37.69 E-value=37 Score=19.00 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=13.6
Q ss_pred hHHHHHhCC-----cccceEEE
Q 034203 19 QDVARDFGA-----ACTPEFFL 35 (101)
Q Consensus 19 ~~vA~~yga-----~~tP~~fl 35 (101)
+++.+.+|. ..+|+.|+
T Consensus 46 ~el~~~~g~~~~~~~~vP~i~i 67 (89)
T 3msz_A 46 YDEMNQSGKVIFPISTVPQIFI 67 (89)
T ss_dssp HHHHHTTTCCSSCCCSSCEEEE
T ss_pred HHHHHHhCCCCCCCCccCEEEE
Confidence 457777888 89999986
No 300
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=37.55 E-value=15 Score=28.23 Aligned_cols=51 Identities=18% Similarity=0.104 Sum_probs=37.4
Q ss_pred hHHHHHhC--CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHH
Q 034203 19 QDVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIE 73 (101)
Q Consensus 19 ~~vA~~yg--a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~ 73 (101)
...++.|. --+|-+..-+|.+| .+.|.||.||.....+..+.-.++|.+|.
T Consensus 381 ~~t~~~f~~g~~~TGDl~~~~~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 433 (517)
T 3r44_A 381 EATRDAFDNGWFRTGDIGEIDDEG----YLYIKDRLKDMIISGGENVYPAEIESVII 433 (517)
T ss_dssp HHHHHTEETTEEEEEEEEEECTTS----CEEEEECGGGCEEETTEEECHHHHHHHHT
T ss_pred hhhHhhhcCCCEecceeEEEcCCe----eEEEecCCcCEEEECCEEECHHHHHHHHH
Confidence 34556663 35789999999999 59999999987665555566677776654
No 301
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=36.14 E-value=52 Score=17.65 Aligned_cols=28 Identities=11% Similarity=0.102 Sum_probs=17.3
Q ss_pred ccceeEE-EeChhHHHH---HhCCcccceEEE
Q 034203 8 FLMWLIT-LFQSQDVAR---DFGAACTPEFFL 35 (101)
Q Consensus 8 ~l~fpvl-~D~~~~vA~---~yga~~tP~~fl 35 (101)
+++|-.. .|.+.+.++ .+|....|+.++
T Consensus 25 ~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~ 56 (75)
T 1r7h_A 25 GLAYNTVDISLDDEARDYVMALGYVQAPVVEV 56 (75)
T ss_dssp TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE
Confidence 4555432 234444444 799999999873
No 302
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=33.75 E-value=84 Score=21.68 Aligned_cols=50 Identities=18% Similarity=0.355 Sum_probs=32.9
Q ss_pred hHHHHHhCC----cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCC
Q 034203 19 QDVARDFGA----ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQP 80 (101)
Q Consensus 19 ~~vA~~yga----~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~ 80 (101)
+.+.+.||. ...|...++|.++. +..+.+.++. ....+.+-++.+++|+-
T Consensus 180 ~~~~~~fgl~~~~~~~P~v~i~~~~~~---ky~~~~~~t~---------~~~~i~~F~~~~~~Gkl 233 (252)
T 2h8l_A 180 SHELSDFGLESTAGEIPVVAIRTAKGE---KFVMQEEFSR---------DGKALERFLQDYFDGNL 233 (252)
T ss_dssp HHHHGGGTCCCCSCSSCEEEEECTTSC---EEECCSCCCT---------TSHHHHHHHHHHHHTCS
T ss_pred HHHHHHcCCCCccCCCCEEEEEeCcCc---EecCCcccCc---------chHHHHHHHHHHHCCCc
Confidence 457788898 35899999988663 3333332211 12239999999999974
No 303
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=32.86 E-value=20 Score=27.49 Aligned_cols=52 Identities=19% Similarity=0.135 Sum_probs=36.0
Q ss_pred hHHHHHhC---CcccceEEEEeCCCCCceeEEEeecCC-CCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFD-DSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~id-d~~~~~~~~~~~~~L~~AI~a 74 (101)
...+++|. --+|-+..-+|++| .+.|.||.+ +.....+..+.-.+++++|.+
T Consensus 372 ~~t~~~f~~~g~y~TGDl~~~~~dG----~l~~~GR~~d~~ik~~G~~v~~~eIE~~l~~ 427 (505)
T 3nyq_A 372 DATAAAFTEDGFFRTGDMAVRDPDG----YVRIVGRKATDLIKSGGYKIGAGEIENALLE 427 (505)
T ss_dssp HHHHHTBCTTSCEEEEEEEEECTTS----CEEEEEESSCCCEEETTEEECHHHHHHHHTT
T ss_pred hHhhhhhcCCCCCccCCeEEECCCc----cEEEeCCccCceEEeCCEEECHHHHHHHHHH
Confidence 45566663 35799999999999 599999985 543344445556677776543
No 304
>1i9w_A Fusion protein E1; envelope glycoprotein, membrane fusion, viral protein; 3.00A {Semliki forest virus} SCOP: b.1.18.4 f.10.1.1 PDB: 2ala_A 1rer_A
Probab=32.53 E-value=26 Score=27.41 Aligned_cols=25 Identities=28% Similarity=0.423 Sum_probs=22.0
Q ss_pred HHHHHHcCCCCCCCCCCCCcceeee
Q 034203 71 AIECVLSGQPVSSNQKPSVGCSIKW 95 (101)
Q Consensus 71 AI~alLag~~v~~~~t~~~GC~I~~ 95 (101)
-.+.-++.+..+.+.|.++||.|+-
T Consensus 239 Gf~~W~~~~g~~L~~tAPFGC~I~~ 263 (390)
T 1i9w_A 239 GFKYWLKEKGTALNTKAPFGCQIKT 263 (390)
T ss_pred HHHHHHhcCCCccccCCCcceEEec
Confidence 4567888899999999999999986
No 305
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=32.35 E-value=24 Score=26.85 Aligned_cols=52 Identities=19% Similarity=0.214 Sum_probs=23.6
Q ss_pred hHHHHHhC--CcccceEEEEeCCCCCceeEEEeecC--CCCCCCCCCCCcHHHHHHHHHH
Q 034203 19 QDVARDFG--AACTPEFFLFKKDGRRPFQLVYHGQF--DDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 19 ~~vA~~yg--a~~tP~~fliD~~G~~~v~~~Y~G~i--dd~~~~~~~~~~~~~L~~AI~a 74 (101)
...++.|. --+|-+..-+|++| .+.|.||. ||....++..+.-.+++++|.+
T Consensus 366 ~~t~~~f~~g~~~TGDl~~~~~dG----~l~~~GR~d~~d~ik~~G~~v~p~eiE~~l~~ 421 (509)
T 3ivr_A 366 AATQHAFRNGWHHTGDMGRFDADG----YLFYAGRAPEKELIKTGGENVYPAEVEGALKQ 421 (509)
T ss_dssp HHHHHHTGGGSEEEEEEEEECTTS----CEEEEEEC------------------------
T ss_pred HHhHHHhhcCCcccccEEEECCCc----eEEEeCCCCcceeEEECCEEECHHHHHHHHHh
Confidence 45556663 45789999999999 59999999 5444434444445566665544
No 306
>3j0f_E E1 envelope glycoprotein; alphavirus, virus assembly; 7.00A {Sindbis virus} PDB: 1ld4_M 1z8y_I
Probab=31.97 E-value=27 Score=27.79 Aligned_cols=25 Identities=16% Similarity=0.244 Sum_probs=22.0
Q ss_pred HHHHHHcCCCCCCCCCCCCcceeee
Q 034203 71 AIECVLSGQPVSSNQKPSVGCSIKW 95 (101)
Q Consensus 71 AI~alLag~~v~~~~t~~~GC~I~~ 95 (101)
-.+.-++.+..+.+.|.++||.|+-
T Consensus 239 Gf~~W~k~~g~~L~~tAPFGC~I~~ 263 (439)
T 3j0f_E 239 GFEMWKNNSGRPLQETAPFGCKIAV 263 (439)
T ss_pred HHHHHHhcCCCccccCCCcccEEec
Confidence 4567888899999999999999986
No 307
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=31.66 E-value=11 Score=29.26 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=35.3
Q ss_pred HHHHHhC---CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 20 DVARDFG---AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 20 ~vA~~yg---a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
..+++|. --+|-+...+|.+| .+.+.||.||.....+..+.-.+++++|.+
T Consensus 403 ~t~~~f~~~g~~~TGDlg~~d~dG----~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~ 456 (541)
T 1v25_A 403 ATRSALTPDGFFRTGDIAVWDEEG----YVEIKDRLKDLIKSGGEWISSVDLENALMG 456 (541)
T ss_dssp HHHTTBCTTSCEEEEEEEEECTTC----CEEEEEESSCEEEETTEEEEHHHHHCC---
T ss_pred hhhhhccCCCCeEcCCEEEEcCCc----eEEEeecccceeeeCCEEECHHHHHHHHHh
Confidence 3444552 35788999999999 599999999876555555666777776654
No 308
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=31.26 E-value=88 Score=18.82 Aligned_cols=52 Identities=10% Similarity=0.128 Sum_probs=30.2
Q ss_pred cccceeEE-EeChhHHHHHh-----CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHc
Q 034203 7 LFLMWLIT-LFQSQDVARDF-----GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLS 77 (101)
Q Consensus 7 ~~l~fpvl-~D~~~~vA~~y-----ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLa 77 (101)
++++|-.+ .|.+.+..+.+ |.+..|..|+-| |. .+ . .+ +...|+++|++++.
T Consensus 27 ~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i~D--g~---~l--~-~~-----------~~~el~~~L~el~g 84 (92)
T 2lqo_A 27 NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKFAD--GS---TL--T-NP-----------SADEVKAKLVKIAG 84 (92)
T ss_dssp TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEETT--SC---EE--E-SC-----------CHHHHHHHHHHHHC
T ss_pred cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEEeC--CE---EE--e-CC-----------CHHHHHHHHHHhcC
Confidence 35566532 34444443333 788999988744 53 11 1 11 25689999988764
No 309
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=31.13 E-value=18 Score=28.37 Aligned_cols=43 Identities=16% Similarity=0.168 Sum_probs=32.8
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
-+|-+...+|.+| .+.+.||.||.....+..+.-.++|++|.+
T Consensus 409 ~~TGDlg~~d~dG----~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~ 451 (563)
T 1amu_A 409 YKTGDQARWLSDG----NIEYLGRIDNQVKIRGHRVELEEVESILLK 451 (563)
T ss_dssp EEEEEEEEECTTS----CEEEEEEGGGEEEETTEEEEHHHHHHHHTT
T ss_pred EecCCEEEEcCCC----eEEEeccccCEEEECCEEeCHHHHHHHHHh
Confidence 4688888999999 599999999876555555666777766543
No 310
>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=29.99 E-value=38 Score=23.30 Aligned_cols=31 Identities=13% Similarity=0.097 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcceeeeeCCCC
Q 034203 65 GRDIRLAIECVLSGQPVSSNQKPSVGCSIKWHPQTV 100 (101)
Q Consensus 65 ~~~L~~AI~alLag~~v~~~~t~~~GC~I~~~~~~~ 100 (101)
..+|+.|+++...... ..+++||-|. ++|.|
T Consensus 4 ~~fM~~A~~~A~rs~~----~~~~VGAVIV-~dg~I 34 (193)
T 1vq2_A 4 STVLQIAYLVSQESKC----CSWKVGAVIE-KNGRI 34 (193)
T ss_dssp HHHHHHHHHHHTTCCC----SSBCCEEEEE-ETTEE
T ss_pred HHHHHHHHHHHHhcCC----CCCCEEEEEE-ECCEE
Confidence 5689999987776643 2689999998 66653
No 311
>2ljk_A Protein C17ORF37; MIEN1, oncoprotein, signaling protein; NMR {Homo sapiens}
Probab=29.41 E-value=20 Score=23.50 Aligned_cols=50 Identities=22% Similarity=0.246 Sum_probs=30.3
Q ss_pred eeEEEeecCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCCCCCCCCccee
Q 034203 44 FQLVYHGQFDDSRPSNNLPVTGRDIRLAIECVLSGQPVSSNQKPSVGCSI 93 (101)
Q Consensus 44 v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~alLag~~v~~~~t~~~GC~I 93 (101)
|.+...|.+-.++..++.-...+.+.+.|...+.|+++..-+..---|.|
T Consensus 67 FeV~v~g~li~sk~~~g~FPe~~el~~~Vrd~~~g~~l~~v~~~~~~c~i 116 (117)
T 2ljk_A 67 FEIEINGQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRPPCVI 116 (117)
T ss_dssp EEEETTSSCCBCHHHHCSCCCTTTTTHHHHHHTTTSCCCCCCCCSCCCCC
T ss_pred EEEEECCEEEEEEccCCCCCCHHHHHHHHHHhhCCCCchhccccCCCccc
Confidence 66655555444433223333456889999999999887644333335876
No 312
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=29.23 E-value=15 Score=28.47 Aligned_cols=49 Identities=14% Similarity=0.204 Sum_probs=33.7
Q ss_pred hHHHHHhC-----------CcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHH
Q 034203 19 QDVARDFG-----------AACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAI 72 (101)
Q Consensus 19 ~~vA~~yg-----------a~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI 72 (101)
...+++|. --+|-+...+| +| .+.|.||.||.....+..+.-.++|.+|
T Consensus 418 ~~t~~~f~~~~~~~~~g~~~~~TGDlg~~d-dG----~l~~~GR~dd~Ik~~G~~v~p~eIE~~l 477 (590)
T 3kxw_A 418 EETRHAFAGKIKDDERSAIYLRTGDLGFLH-EN----ELYVTGRIKDLIIIYGKNHYPQDIEFSL 477 (590)
T ss_dssp HHHHHHHCBCCTTC---CCBEEEEEEEEEE-TT----EEEEEEESSCHHHHHHHTTHHHHHHHHH
T ss_pred hHHHHHHhccccCCCCCCcEEecCcEEEEE-CC----EEEEEcCccceEEECCEecCHHHHHHHH
Confidence 35667773 34799999999 89 6999999998644333334445666655
No 313
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=27.46 E-value=40 Score=20.50 Aligned_cols=16 Identities=19% Similarity=0.355 Sum_probs=14.0
Q ss_pred HHHHHhCCcccceEEE
Q 034203 20 DVARDFGAACTPEFFL 35 (101)
Q Consensus 20 ~vA~~yga~~tP~~fl 35 (101)
++++.+|...+|+.|+
T Consensus 66 ~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 66 YFEQITGGKTVPRIFF 81 (114)
T ss_dssp HHHHHHSCCSSCEEEE
T ss_pred HHHHHhCCCCcCEEEE
Confidence 7889999999998765
No 314
>2yew_B E1 envelope glycoprotein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=26.59 E-value=28 Score=27.59 Aligned_cols=25 Identities=24% Similarity=0.337 Sum_probs=21.7
Q ss_pred HHHHHHcCCCCCCCCCCCCcceeee
Q 034203 71 AIECVLSGQPVSSNQKPSVGCSIKW 95 (101)
Q Consensus 71 AI~alLag~~v~~~~t~~~GC~I~~ 95 (101)
-.+.-++.+..+.+.|.++||.|+-
T Consensus 234 Gf~~W~k~~g~~L~~tAPFGC~I~~ 258 (427)
T 2yew_B 234 GFSYWKKEKGVPLNRNAPFGCIIKV 258 (427)
T ss_dssp HHHHHTTTCCEESTTCSSSCCEEET
T ss_pred HHHHHHhcCCCccccCCCcccEEec
Confidence 3566788899999999999999985
No 315
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=25.03 E-value=1e+02 Score=17.43 Aligned_cols=17 Identities=18% Similarity=0.147 Sum_probs=14.4
Q ss_pred hHHHHHhCCcccceEEE
Q 034203 19 QDVARDFGAACTPEFFL 35 (101)
Q Consensus 19 ~~vA~~yga~~tP~~fl 35 (101)
.++++.+|...+|+.|+
T Consensus 57 ~~l~~~~g~~~vP~l~~ 73 (92)
T 3ic4_A 57 EKVHSISGSYSVPVVVK 73 (92)
T ss_dssp HHHHHHHSSSCSCEEEE
T ss_pred HHHHHhcCCCCcCEEEE
Confidence 56778899999999887
No 316
>1za8_A VHL-1; circular protein, cyclic cystine knot motif, antiviral protein; NMR {Viola hederacea}
Probab=24.65 E-value=19 Score=18.52 Aligned_cols=11 Identities=36% Similarity=0.543 Sum_probs=9.2
Q ss_pred CCCCCcceeee
Q 034203 85 QKPSVGCSIKW 95 (101)
Q Consensus 85 ~t~~~GC~I~~ 95 (101)
.|+.+||+=+|
T Consensus 12 ~T~~~GCsC~~ 22 (31)
T 1za8_A 12 FTEVIGCSCKN 22 (31)
T ss_dssp GGGTTTCEEET
T ss_pred ccCCCCcccCC
Confidence 47789999987
No 317
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=24.60 E-value=50 Score=19.28 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=13.7
Q ss_pred HHHHHhCCcccceEEE
Q 034203 20 DVARDFGAACTPEFFL 35 (101)
Q Consensus 20 ~vA~~yga~~tP~~fl 35 (101)
.+++.+|....|+.|+
T Consensus 59 ~l~~~~g~~~vP~i~~ 74 (105)
T 1kte_A 59 YLQQLTGARTVPRVFI 74 (105)
T ss_dssp HHHHHHSCCCSCEEEE
T ss_pred HHHHHhCCCCcCeEEE
Confidence 5788999999999865
No 318
>2a8n_A Cytidine and deoxycytidylate deaminase; RNA editing, RNA binding protein; 1.60A {Agrobacterium tumefaciens} SCOP: c.97.1.2
Probab=24.40 E-value=27 Score=22.93 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcceeeeeCCC
Q 034203 65 GRDIRLAIECVLSGQPVSSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 65 ~~~L~~AI~alLag~~v~~~~t~~~GC~I~~~~~~ 99 (101)
..+|+.|++........ ...++||.|.. +|.
T Consensus 5 ~~~m~~A~~~A~~a~~~---~~~~VGAviv~-~g~ 35 (144)
T 2a8n_A 5 THFMELALVEARSAGER---DEVPIGAVLVL-DGR 35 (144)
T ss_dssp HHHHHHHHHHHHHHHHT---TSCCCEEEEEE-TTE
T ss_pred HHHHHHHHHHHHHhhcC---CCCCEEEEEEE-CCE
Confidence 56899999876665443 36899999986 654
No 319
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=24.17 E-value=1.1e+02 Score=24.47 Aligned_cols=49 Identities=12% Similarity=0.051 Sum_probs=33.5
Q ss_pred EEEeCh----hHHHHHhCCcc-cceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHHH
Q 034203 13 ITLFQS----QDVARDFGAAC-TPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIECV 75 (101)
Q Consensus 13 vl~D~~----~~vA~~yga~~-tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~al 75 (101)
++.|.. +.+.+.||+.. ....+|+-++| -+-+++..++ ...|++.++..
T Consensus 583 ~~~d~~~~~~~~~~~~~g~~~~~g~~v~vRPD~----yv~~~~~~~~----------~~~l~~~~~~~ 636 (639)
T 2dkh_A 583 VFSPDLKNAGQDIFELRGIDRQQGALVVVRPDQ----YVAQVLPLGD----------HAALSAYFESF 636 (639)
T ss_dssp EEECCCSSTTCCHHHHTTBCTTTCEEEEECTTS----BEEEEECTTC----------HHHHHHHHHTT
T ss_pred EEeCCCcccccchHHHhCCCCCceEEEEECCCC----ceEEeechhh----------HHHHHHHHHHH
Confidence 566742 67999999875 68889999999 3556666543 34566655543
No 320
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=23.52 E-value=1.4e+02 Score=18.73 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=26.3
Q ss_pred ccceeEEEeChhHHHHHhCCcccceEEEEeCCCCCceeEEEee
Q 034203 8 FLMWLITLFQSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHG 50 (101)
Q Consensus 8 ~l~fpvl~D~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G 50 (101)
.++|=.. .+.++++.|++. .|+..|+.+-.. =+..|.|
T Consensus 67 d~~F~~t--~~~~v~~~~~v~-~~~vvlfkkfde--~~~~~~g 104 (124)
T 2l4c_A 67 GVSFGIS--TDSEVLTHYNIT-GNTICLFRLVDN--EQLNLED 104 (124)
T ss_dssp TSEEEEE--CCHHHHHHTTCC-SSCEEEEETTTT--EEEEECH
T ss_pred CceEEEE--ChHHHHHHcCCC-CCeEEEEEcCCC--CceeecC
Confidence 3444444 346799999998 899999987332 1577877
No 321
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=23.28 E-value=33 Score=29.92 Aligned_cols=43 Identities=19% Similarity=0.268 Sum_probs=34.2
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
-+|-+..-++++| .+.|.||.|+.....+..+.-.+++.+|.+
T Consensus 840 yrTGDl~~~~~dG----~l~~~GR~d~qvki~G~rie~~eIE~~l~~ 882 (1304)
T 2vsq_A 840 YRTGDLARWLPDG----TIEYAGRIDDQVKIRGHRIELEEIEKQLQE 882 (1304)
T ss_dssp EEEEEEEEECTTS----CEEEEEEGGGEEEETTEEEEHHHHHHHHHH
T ss_pred EecCCeEEEcCCC----eEEEEcCCCCEEEECCEeeCHHHHHHHHHh
Confidence 4688888899999 599999999876655655667788888765
No 322
>2b3j_A TRNA adenosine deaminase; mixed alpha-beta, protein-RNA complex, RNA stem-loop, hydrol complex; HET: P5P; 2.00A {Staphylococcus aureus subsp} SCOP: c.97.1.2
Probab=22.60 E-value=31 Score=23.17 Aligned_cols=31 Identities=19% Similarity=0.114 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcceeeeeCCC
Q 034203 65 GRDIRLAIECVLSGQPVSSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 65 ~~~L~~AI~alLag~~v~~~~t~~~GC~I~~~~~~ 99 (101)
..+|+.|++........ ...++||.|.. +|.
T Consensus 8 ~~~m~~A~~~A~~a~~~---~~~pVGAviv~-~g~ 38 (159)
T 2b3j_A 8 IYFMTLAIEEAKKAAQL---GEVPIGAIITK-DDE 38 (159)
T ss_dssp HHHHHHHHHHHHHHHHT---TSCCCEEEEEE-TTE
T ss_pred HHHHHHHHHHHHHhhcC---CCCCEEEEEEE-CCE
Confidence 56899999876665443 36899999985 554
No 323
>2hvw_A Deoxycytidylate deaminase; 3-layer (alpha-beta)-sandwich, protein-liand complex, hydrolase; HET: DCP DDN; 1.67A {Streptococcus mutans} PDB: 2hvv_A*
Probab=22.42 E-value=73 Score=22.05 Aligned_cols=31 Identities=10% Similarity=-0.094 Sum_probs=22.5
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCCCcceeeeeCCC
Q 034203 64 TGRDIRLAIECVLSGQPVSSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 64 ~~~~L~~AI~alLag~~v~~~~t~~~GC~I~~~~~~ 99 (101)
...+|+.|++....... ..+++||-|.. +|.
T Consensus 42 de~~M~~A~~~A~~s~~----~~~~VGAVIV~-dg~ 72 (184)
T 2hvw_A 42 QDYFMANAELISKRSTC----NRAYVGAVLVK-NNR 72 (184)
T ss_dssp HHHHHHHHHHHGGGCCC----TTCCCEEEEEE-TTE
T ss_pred HHHHHHHHHHHHHhcCC----CCCCEEEEEEE-CCE
Confidence 45689999987666532 27899999984 654
No 324
>2b3z_A Riboflavin biosynthesis protein RIBD; alpha/beta/alpha, deaminase domain and reductase domain, hydrolase, oxidoreductase; 2.41A {Bacillus subtilis} SCOP: c.71.1.2 c.97.1.2 PDB: 2d5n_A* 3ex8_A*
Probab=22.25 E-value=68 Score=24.34 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=24.0
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCCCcceeeeeCCCC
Q 034203 64 TGRDIRLAIECVLSGQPVSSNQKPSVGCSIKWHPQTV 100 (101)
Q Consensus 64 ~~~~L~~AI~alLag~~v~~~~t~~~GC~I~~~~~~~ 100 (101)
...+|+.|++....+.. .....+++||-|. ++|.+
T Consensus 14 ~~~~m~~A~~~A~~~~~-~~~~~~~vGaviv-~~g~i 48 (373)
T 2b3z_A 14 EEYYMKLALDLAKQGEG-QTESNPLVGAVVV-KDGQI 48 (373)
T ss_dssp HHHHHHHHHHHHGGGTT-SSTTSCCCEEEEE-SSSSE
T ss_pred HHHHHHHHHHHHHhhCc-ccCCCCcEEEEEE-ECCEE
Confidence 36799999997666543 2233679999998 45543
No 325
>3muu_A Structural polyprotein; beta barrels, IG-like folds, viral protein; HET: NAG BMA MAN; 3.29A {Sindbis virus} PDB: 3muw_A 3muw_U 1z8y_A 1z8y_B
Probab=22.12 E-value=52 Score=27.93 Aligned_cols=25 Identities=16% Similarity=0.244 Sum_probs=22.0
Q ss_pred HHHHHHcCCCCCCCCCCCCcceeee
Q 034203 71 AIECVLSGQPVSSNQKPSVGCSIKW 95 (101)
Q Consensus 71 AI~alLag~~v~~~~t~~~GC~I~~ 95 (101)
-.+.-++.+..+.+.|.++||.|+-
T Consensus 599 Gf~~W~k~~g~~L~~tAPFGC~I~~ 623 (750)
T 3muu_A 599 GFEMWKNNSGRPLQETAPFGCKIAV 623 (750)
T ss_dssp HHHHHHTTCCSCGGGTCTTSCEEEE
T ss_pred HHHHHhhcCCCccccCCCcceEEec
Confidence 4566888999999999999999986
No 326
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=21.98 E-value=48 Score=25.20 Aligned_cols=42 Identities=17% Similarity=0.195 Sum_probs=32.3
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
-+|-+...+ .+| .+.+.||.||....++..+.-.++|++|.+
T Consensus 379 ~~TGDlg~~-~dG----~l~i~GR~~d~ik~~G~~v~p~eIE~~l~~ 420 (512)
T 3fce_A 379 YKTGDAGYV-ENG----LLFYNGRLDFQIKLHGYRMELEEIEHHLRA 420 (512)
T ss_dssp EEEEEEEEE-ETT----EEEEEEEGGGCEEETTEEECHHHHHHHHHH
T ss_pred EeCCceEEe-cCC----EEEEecccCCEEEECCEEECHHHHHHHHHh
Confidence 467777666 588 699999999876666666777888888775
No 327
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=21.88 E-value=1.2e+02 Score=21.97 Aligned_cols=32 Identities=9% Similarity=0.099 Sum_probs=25.2
Q ss_pred ChhHHHHHhCCcccceEEEEeCCCCCceeEEEeec
Q 034203 17 QSQDVARDFGAACTPEFFLFKKDGRRPFQLVYHGQ 51 (101)
Q Consensus 17 ~~~~vA~~yga~~tP~~fliD~~G~~~v~~~Y~G~ 51 (101)
.+.++++.||+. .|+..++.+.+.. ...|.|.
T Consensus 178 ~~~~~~~~~~v~-~p~i~~~~~~~~~--~~~y~g~ 209 (350)
T 1sji_A 178 FDKGVAKKLSLK-MNEVDFYEPFMDE--PIAIPDK 209 (350)
T ss_dssp CCHHHHHHHTCC-TTCEEEECTTCSS--CEECSSS
T ss_pred CCHHHHHHcCCC-CCcEEEEeCCCCC--ceecCCC
Confidence 456799999999 9999999885432 4778886
No 328
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=21.75 E-value=1e+02 Score=21.97 Aligned_cols=26 Identities=15% Similarity=0.180 Sum_probs=20.9
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCC
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDS 55 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~ 55 (101)
...|+.+++|++|. ..+.|+|--+.-
T Consensus 109 ~l~P~NL~f~~~~~--p~i~hRGi~~~l 134 (219)
T 4ano_A 109 IVCPENLMFNRALE--PFFLHVGVKESL 134 (219)
T ss_dssp CCCGGGEEECTTCC--EEESCCEETTTB
T ss_pred EEeCceEEEeCCCc--EEEEEcCCcccC
Confidence 45799999999997 788899985543
No 329
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=21.16 E-value=57 Score=24.80 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=32.4
Q ss_pred cccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 28 ACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 28 ~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
-+|-+...++ +| .+.+.||.||....++..+.-.++|++|.+
T Consensus 378 ~~TGDlg~~~-dG----~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~ 419 (511)
T 3e7w_A 378 YRTGDAGFIQ-DG----QIFCQGRLDFQIKLHGYRMELEEIEFHVRQ 419 (511)
T ss_dssp EEEEEEEEEE-TT----EEEEEEESSSEEEETTEEEEHHHHHHHHHH
T ss_pred EeCCCeEEcc-CC----eEEEEccccCEEEECCEEeCHHHHHHHHHh
Confidence 4677777775 78 699999999876666666777888888776
No 330
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=20.85 E-value=46 Score=25.46 Aligned_cols=44 Identities=23% Similarity=0.163 Sum_probs=31.9
Q ss_pred CCcccceEEEEeCCCCCceeEEEeecCCCCCCCCCCCCcHHHHHHHHHH
Q 034203 26 GAACTPEFFLFKKDGRRPFQLVYHGQFDDSRPSNNLPVTGRDIRLAIEC 74 (101)
Q Consensus 26 ga~~tP~~fliD~~G~~~v~~~Y~G~idd~~~~~~~~~~~~~L~~AI~a 74 (101)
|--+|-+...+ .+| .+.+.||.||.....+..+.-.++|.+|.+
T Consensus 439 g~~~TGDl~~~-~dG----~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 482 (576)
T 3gqw_A 439 GWLDTGDLGYL-LDG----YLYVTGRIKDLIIIRGRNIWPQDIEYIAEQ 482 (576)
T ss_dssp SCEEEEEEEEE-ETT----EEEEEEETTTCEEETTEEECHHHHHHHHTT
T ss_pred CeeeccceEEE-ECC----EEEEEecCcceEEECCEEECHHHHHHHHHh
Confidence 34578887777 588 699999999876655555666777776654
No 331
>1wwr_A TRNA adenosine deaminase TADA; homodimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, hydrolase; 1.80A {Aquifex aeolicus} SCOP: c.97.1.2
Probab=20.28 E-value=36 Score=23.30 Aligned_cols=32 Identities=13% Similarity=0.014 Sum_probs=23.5
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCCCcceeeeeCCC
Q 034203 64 TGRDIRLAIECVLSGQPVSSNQKPSVGCSIKWHPQT 99 (101)
Q Consensus 64 ~~~~L~~AI~alLag~~v~~~~t~~~GC~I~~~~~~ 99 (101)
...+|+.|++........ ...++||.|.. +|.
T Consensus 23 ~~~~M~~A~~~A~~a~~~---~~~pVGAvIV~-dg~ 54 (171)
T 1wwr_A 23 KEYFLKVALREAKRAFEK---GEVPVGAIIVK-EGE 54 (171)
T ss_dssp HHHHHHHHHHHHHHHHHT---TSCCCEEEEEE-TTE
T ss_pred HHHHHHHHHHHHHhcccC---CCCCEEEEEEE-CCE
Confidence 357899999887665443 36899999985 554
No 332
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=20.25 E-value=66 Score=19.82 Aligned_cols=16 Identities=13% Similarity=0.324 Sum_probs=13.8
Q ss_pred HHHHHhCCcccceEEE
Q 034203 20 DVARDFGAACTPEFFL 35 (101)
Q Consensus 20 ~vA~~yga~~tP~~fl 35 (101)
++++.+|....|+.|+
T Consensus 73 ~l~~~~g~~tvP~vfi 88 (118)
T 3c1r_A 73 ALYEINGQRTVPNIYI 88 (118)
T ss_dssp HHHHHHSCCSSCEEEE
T ss_pred HHHHHhCCCCcCEEEE
Confidence 6888999999998865
No 333
>1z3a_A TRNA-specific adenosine deaminase; tRNA adenosine deaminase, dimer, zinc, metalloenzyme, structural genomics, PSI, protein structure initiative; 2.03A {Escherichia coli} SCOP: c.97.1.2 PDB: 3ocq_A
Probab=20.16 E-value=36 Score=23.15 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCcceeeeeCCCC
Q 034203 65 GRDIRLAIECVLSGQPVSSNQKPSVGCSIKWHPQTV 100 (101)
Q Consensus 65 ~~~L~~AI~alLag~~v~~~~t~~~GC~I~~~~~~~ 100 (101)
..+|+.|++....+... ...++||-|. ++|.|
T Consensus 10 ~~~M~~A~~~A~~a~~~---~~~pVGAviV-~~g~I 41 (168)
T 1z3a_A 10 EYWMRHALTLAKRAWDE---REVPVGAVLV-HNNRV 41 (168)
T ss_dssp HHHHHHHHHHHHHHHHT---TSCCCEEEEE-ETTEE
T ss_pred HHHHHHHHHHHHHhhhc---CCCcEEEEEE-ECCEE
Confidence 57899999876655432 2458999998 56543
No 334
>1p6o_A Cytosine deaminase; hydrolase, dimer, inhibitor bound; 1.14A {Saccharomyces cerevisiae} SCOP: c.97.1.2 PDB: 1ox7_A 1rb7_A 1ysd_A 1ysb_A 2o3k_A 1uaq_A
Probab=20.11 E-value=37 Score=22.86 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=23.6
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCCCCCcceee-eeCCCC
Q 034203 64 TGRDIRLAIECVLSGQPVSSNQKPSVGCSIK-WHPQTV 100 (101)
Q Consensus 64 ~~~~L~~AI~alLag~~v~~~~t~~~GC~I~-~~~~~~ 100 (101)
...+|+.|++........ ...++||-|. .++|.|
T Consensus 14 d~~~M~~A~~~A~~a~~~---~~~pVGAviVd~~~g~I 48 (161)
T 1p6o_A 14 DQKGMDIAYEEAALGYKE---GGVPIGGCLINNKDGSV 48 (161)
T ss_dssp HHHHHHHHHHHHHHHHHT---TSCCCEEEEEETTTCCE
T ss_pred HHHHHHHHHHHHHhhhcc---CCCCEEEEEEEecCCEE
Confidence 357899999876665432 2578999998 456653
Done!