BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034209
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGN1|GLR14_ARATH Glutamate receptor 1.4 OS=Arabidopsis thaliana GN=GLR1.4 PE=2
SV=2
Length = 861
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 11 FFSSLILLIIHLCPSCSELEKVKN--NTSFTADEVHVGVILDMRSWSGKISNSCISMAIA 68
F + L I +CS + N ++V +G+++DM S GK+ + ISMA++
Sbjct: 12 FLTIFFLAFISFAVTCSGTNQKDNVDRLPVVYEDVRIGLVVDMGSMEGKLVTTSISMALS 71
Query: 69 DFYALNTHYKTRLVLHSRDSQA 90
DFY +N Y+TR+ + SRDS
Sbjct: 72 DFYHVNNGYRTRVSVLSRDSHG 93
>sp|Q9LV72|GLR12_ARATH Glutamate receptor 1.2 OS=Arabidopsis thaliana GN=GLR1.2 PE=2
SV=1
Length = 867
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 33 KNNTSFTADEVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDSQAQ 91
+NN V VG++LD+ S GKI S +SMA++DFY + YKTRL L RDS +
Sbjct: 30 QNNDDDKRIRVRVGLVLDLGSVEGKIVRSSVSMALSDFYDNHNDYKTRLSLLVRDSHGE 88
>sp|Q9M8W7|GLR11_ARATH Glutamate receptor 1.1 OS=Arabidopsis thaliana GN=GLR1.1 PE=2
SV=1
Length = 808
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 41 DEVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDSQA 90
+EV VG+++D+ S GKI + ++A++DFY +N Y+TR+ + RDSQ
Sbjct: 28 EEVRVGLVVDLSSIQGKILETSFNLALSDFYGINNGYRTRVSVLVRDSQG 77
>sp|O81078|GLR29_ARATH Glutamate receptor 2.9 OS=Arabidopsis thaliana GN=GLR2.9 PE=2
SV=1
Length = 940
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 4/56 (7%)
Query: 33 KNNTSFTADEVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDS 88
+N TS E+ VGV+LD+ + KI + I MA++DFYA + +Y TRL LH RDS
Sbjct: 24 QNQTS----EIKVGVVLDLNTTFSKICLTSIKMAVSDFYADHPNYLTRLTLHVRDS 75
>sp|Q9C5V5|GLR28_ARATH Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2
SV=2
Length = 947
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%)
Query: 42 EVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDS 88
E+ VGV+LD+ + KI + I++A++DFY + +Y+TRL LH RDS
Sbjct: 32 EIKVGVVLDLNTTFSKICLTSINLALSDFYKDHPNYRTRLALHVRDS 78
>sp|Q9FH75|GLR13_ARATH Glutamate receptor 1.3 OS=Arabidopsis thaliana GN=GLR1.3 PE=2
SV=1
Length = 860
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 42 EVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDSQAQ 91
++ VG++LD+ S GKI + +SMA++ FYA++ YKTR+ + R+S +
Sbjct: 41 QIRVGLVLDLGSLKGKIVKNSVSMALSYFYAIHNDYKTRVSVSLRNSHGE 90
>sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2
SV=3
Length = 952
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 42 EVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDSQAQI 92
E+ VGV+LD+ + K+ + I+++++DFY ++ Y TRL +H RDS +
Sbjct: 38 EIKVGVVLDLHTSFSKLCLTSINISLSDFYKYHSDYTTRLAIHIRDSMEDV 88
>sp|Q9LFN8|GLR26_ARATH Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2
SV=2
Length = 967
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 42 EVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDSQAQI 92
+V VG++LD + +S I+M++++FY + +KTR+VL+ RDS+ +
Sbjct: 35 QVQVGIVLDTNATLAALSLRAINMSLSEFYNTHNGFKTRIVLNIRDSKRTV 85
>sp|Q9SHV1|GLR22_ARATH Glutamate receptor 2.2 OS=Arabidopsis thaliana GN=GLR2.2 PE=2
SV=1
Length = 920
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 35/51 (68%)
Query: 42 EVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDSQAQI 92
+V++GV+ D+ + ++ CI+M++ADFY+ ++TRLV++ DS+ +
Sbjct: 31 QVNIGVVSDVGTSYPDVAMLCINMSLADFYSSRPQFQTRLVVNVGDSKNDV 81
>sp|Q9SHV2|GLR23_ARATH Glutamate receptor 2.3 OS=Arabidopsis thaliana GN=GLR2.3 PE=2
SV=1
Length = 895
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 6 KKEQAFFSSLILLIIHLCPSCSELEKVKNNTSFTADEVHVGVILDMRSWSGKISNSCISM 65
+ E+ FF L++ C E + +NN D V + S K+ CI+M
Sbjct: 2 RTEKLFFCILLVFFF-----CLEFNRGQNNGKTLVDVGVVTDVDTSHS---KVVMLCINM 53
Query: 66 AIADFYALNTHYKTRLVLHSRDSQAQI 92
+I+DFY+ N ++TRLV++ DS++ +
Sbjct: 54 SISDFYSSNPQFETRLVVNVGDSKSDV 80
>sp|O04660|GLR21_ARATH Glutamate receptor 2.1 OS=Arabidopsis thaliana GN=GLR2.1 PE=2
SV=2
Length = 901
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 6 KKEQAFFSSLILLIIHLCPSCSELEKVKNNTSFTADEVHVGVILDMRSWSGKISNSCISM 65
K+E SL+ +I E + N V+VG++ D+ + ++ CI+M
Sbjct: 2 KRENNLVLSLLFFVIVFLMQVGEAQNRITN-------VNVGIVNDIGTAYSNMTLLCINM 54
Query: 66 AIADFYALNTHYKTRLVLHSRDSQAQI 92
+++DFY+ + +TRLV DS+ +
Sbjct: 55 SLSDFYSSHPETQTRLVTTVVDSKNDV 81
>sp|Q9LFN5|GLR25_ARATH Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=1
SV=2
Length = 918
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 40 ADEVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDSQAQI 92
A +V VG++L +S I+M++++FY + +KTR+VL+ RDS+ +
Sbjct: 34 ALQVKVGIVLGSNVTLADLSLRAINMSLSEFYNTHNGFKTRIVLNVRDSKQTV 86
>sp|O81776|GLR24_ARATH Glutamate receptor 2.4 OS=Arabidopsis thaliana GN=GLR2.4 PE=2
SV=2
Length = 896
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 37/62 (59%)
Query: 31 KVKNNTSFTADEVHVGVILDMRSWSGKISNSCISMAIADFYALNTHYKTRLVLHSRDSQA 90
K+ + T ++VGV+ D+ + + +S I+M+++DFY+ +TRL+L+ DS+
Sbjct: 20 KLGKGQNTTIQVINVGVVTDVGTTASNLSLLAINMSLSDFYSSRPESRTRLLLNFADSRD 79
Query: 91 QI 92
+
Sbjct: 80 DV 81
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,278,604
Number of Sequences: 539616
Number of extensions: 1072865
Number of successful extensions: 2002
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1989
Number of HSP's gapped (non-prelim): 13
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)