BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034210
MAATEENSQLFPIFILTIMALPLVPYTILKLCHAFSKKIKTIHCQCSDCARSGKYRKSIF
KRISNFSTCSNLSLVLLWVIMIILIYYIKSTSREFLSHSAY

High Scoring Gene Products

Symbol, full name Information P value
ATERDJ2A
AT1G79940 		protein from Arabidopsis thaliana 5.4e-24
ATERDJ2B
AT4G21180 		protein from Arabidopsis thaliana 7.1e-22

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034210
        (101 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2016354 - symbol:ATERDJ2A species:3702 "Arabid...   284  5.4e-24   1
TAIR|locus:2127373 - symbol:ATERDJ2B species:3702 "Arabid...   264  7.1e-22   1


>TAIR|locus:2016354 [details] [associations]
            symbol:ATERDJ2A species:3702 "Arabidopsis thaliana"
            [GO:0006457 "protein folding" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0031072 "heat shock protein
            binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0030176 "integral to endoplasmic reticulum
            membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0030968
            "endoplasmic reticulum unfolded protein response" evidence=RCA]
            InterPro:IPR027137 InterPro:IPR001623 Pfam:PF00226 EMBL:CP002684
            GO:GO:0005739 GO:GO:0005886 GO:GO:0005794 GO:GO:0006457
            GO:GO:0030176 Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271
            SUPFAM:SSF46565 PROSITE:PS50076 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 KO:K09540 PANTHER:PTHR24075
            EMBL:AK227714 IPI:IPI00846610 RefSeq:NP_001031306.2
            RefSeq:NP_001117623.1 RefSeq:NP_178112.2 UniGene:At.34014
            ProteinModelPortal:Q0WT48 SMR:Q0WT48 PRIDE:Q0WT48
            EnsemblPlants:AT1G79940.1 EnsemblPlants:AT1G79940.2
            EnsemblPlants:AT1G79940.3 GeneID:844334 KEGG:ath:AT1G79940
            TAIR:At1g79940 HOGENOM:HOG000240711 InParanoid:Q0WT48 OMA:GVCILLP
            PhylomeDB:Q0WT48 ProtClustDB:CLSN2689532 Genevestigator:Q0WT48
            Uniprot:Q0WT48
        Length = 687

 Score = 284 (105.0 bits), Expect = 5.4e-24, P = 5.4e-24
 Identities = 57/94 (60%), Positives = 68/94 (72%)

Query:     1 MAATEENSQLFPIFILTIMALPLVPYTILKLCHAFSKKIKTIHCQCSDCARSGKYRKSIF 60
             MAA+EENS LFPIFILTIMA+PLVPYT++KL  A SKK +TIHCQC +C RSGKY++S+F
Sbjct:     1 MAASEENSALFPIFILTIMAIPLVPYTMVKLSGALSKKQRTIHCQCLECDRSGKYKRSLF 60

Query:    61 KRISNFSTCSNXXXXXXXXXXXXXXXXXKSTSRE 94
             K+ISNFST SN                 K+ SRE
Sbjct:    61 KKISNFSTWSNLTLVLLWVVMIFLIYYTKNMSRE 94


>TAIR|locus:2127373 [details] [associations]
            symbol:ATERDJ2B species:3702 "Arabidopsis thaliana"
            [GO:0006457 "protein folding" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0031072 "heat shock protein
            binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0030176 "integral
            to endoplasmic reticulum membrane" evidence=IDA] InterPro:IPR027137
            InterPro:IPR001623 Pfam:PF00226 GO:GO:0005886 GO:GO:0006457
            EMBL:CP002687 GO:GO:0030176 Gene3D:1.10.287.110 PRINTS:PR00625
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS50076 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973 UniGene:At.23696
            UniGene:At.71130 KO:K09540 PANTHER:PTHR24075 OMA:ARFIPPG
            IPI:IPI00518885 RefSeq:NP_567621.1 ProteinModelPortal:F4JIN3
            SMR:F4JIN3 PRIDE:F4JIN3 EnsemblPlants:AT4G21180.1 GeneID:827866
            KEGG:ath:AT4G21180 Uniprot:F4JIN3
        Length = 661

 Score = 264 (98.0 bits), Expect = 7.1e-22, P = 7.1e-22
 Identities = 52/94 (55%), Positives = 66/94 (70%)

Query:     1 MAATEENSQLFPIFILTIMALPLVPYTILKLCHAFSKKIKTIHCQCSDCARSGKYRKSIF 60
             MA +EENS LFPIFILT+MA+PLVPYT +KL  AFSKK ++IHCQC +C RSGKY++SI 
Sbjct:     1 MAESEENSVLFPIFILTMMAIPLVPYTFVKLSRAFSKKQRSIHCQCLECDRSGKYKRSIS 60

Query:    61 KRISNFSTCSNXXXXXXXXXXXXXXXXXKSTSRE 94
             + IS+F++CSN                 K+ SRE
Sbjct:    61 QSISSFTSCSNLTVVLLWIVMIFLIYHTKNMSRE 94


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.132   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      101        84   0.00091  102 3  11 22  0.49    28
                                                     29  0.45    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  528 (56 KB)
  Total size of DFA:  99 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.58u 0.11s 9.69t   Elapsed:  00:00:00
  Total cpu time:  9.58u 0.11s 9.69t   Elapsed:  00:00:00
  Start:  Fri May 10 17:42:02 2013   End:  Fri May 10 17:42:02 2013

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