BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034223
MDLKVVMMLFMVAAAVVDSSAHGSSSWGRINNINRVEDPNEMLMPTEDSRRQLLGTWYSS
YGALEGNSVPCDAPGSSYYNCNGRGLSRPTATAPRRSDSLD

High Scoring Gene Products

Symbol, full name Information P value
RALF
Rapid alkalinization factor
protein from Nicotiana tabacum 3.8e-07
RALFL4
ralf-like 4
protein from Arabidopsis thaliana 4.8e-07
RALFL33
ralf-like 33
protein from Arabidopsis thaliana 6.1e-07
RALFL22
ralf-like 22
protein from Arabidopsis thaliana 7.8e-07
RALFL19
ralf-like 19
protein from Arabidopsis thaliana 1.0e-06
RALF1
rapid alkalinization factor 1
protein from Arabidopsis thaliana 2.1e-06
RALF23
rapid alkalinization factor 23
protein from Arabidopsis thaliana 3.4e-06
RALFL31
ralf-like 31
protein from Arabidopsis thaliana 3.4e-06
RALFL24
ralf-like 24
protein from Arabidopsis thaliana 7.0e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034223
        (101 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|Q945T0 - symbol:RALF "Rapid alkalinization fact...   116  3.8e-07   1
TAIR|locus:2032195 - symbol:RALFL4 "ralf-like 4" species:...   115  4.8e-07   1
TAIR|locus:2130724 - symbol:RALFL33 "ralf-like 33" specie...   114  6.1e-07   1
TAIR|locus:2079787 - symbol:RALFL22 "ralf-like 22" specie...   113  7.8e-07   1
TAIR|locus:504955964 - symbol:RALFL19 "ralf-like 19" spec...   112  1.0e-06   1
TAIR|locus:2024730 - symbol:RALF1 "rapid alkalinization f...   109  2.1e-06   1
TAIR|locus:2089323 - symbol:RALF23 "rapid alkalinization ...   107  3.4e-06   1
TAIR|locus:2129261 - symbol:RALFL31 "ralf-like 31" specie...   107  3.4e-06   1
TAIR|locus:505006366 - symbol:RALFL24 "ralf-like 24" spec...   104  7.0e-06   1


>UNIPROTKB|Q945T0 [details] [associations]
            symbol:RALF "Rapid alkalinization factor" species:4097
            "Nicotiana tabacum" [GO:0004871 "signal transducer activity"
            evidence=IDA] [GO:0005179 "hormone activity" evidence=IDA]
            [GO:0019722 "calcium-mediated signaling" evidence=IDA]
            GO:GO:0005576 GO:GO:0019722 GO:GO:0005179 GO:GO:0004871
            EMBL:AF407278 InterPro:IPR008801 Pfam:PF05498 Uniprot:Q945T0
        Length = 115

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 23/54 (42%), Positives = 31/54 (57%)

Query:    36 VEDPNEMLMPTEDSRRQLLGTWYSSYGALEGNSVPCDAPGSSYYNCNGRGLSRP 89
             + +  E  + +E +RR L    Y SYGAL+ NSVPC   G+SYYNC     + P
Sbjct:    49 IAEEEEFELDSESNRRILATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANP 102


>TAIR|locus:2032195 [details] [associations]
            symbol:RALFL4 "ralf-like 4" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] [GO:0009827 "plant-type cell wall modification"
            evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048046 GO:GO:0019722
            GO:GO:0005179 GO:GO:0007267 GO:GO:0004871 EMBL:AC021044
            InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626
            ProtClustDB:CLSN2679386 EMBL:BT005747 EMBL:AK228573 IPI:IPI00519169
            PIR:H86408 RefSeq:NP_174148.1 UniGene:At.40920 STRING:Q9FZA0
            PRIDE:Q9FZA0 EnsemblPlants:AT1G28270.1 GeneID:839721
            KEGG:ath:AT1G28270 TAIR:At1g28270 eggNOG:NOG299234
            InParanoid:Q9FZA0 PhylomeDB:Q9FZA0 Genevestigator:Q9FZA0
            Uniprot:Q9FZA0
        Length = 110

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 25/54 (46%), Positives = 32/54 (59%)

Query:    37 EDPNEMLMPTEDSRRQLL-GTWYSSYGALEGNSVPCDAPGSSYYNCNGRGLSRP 89
             +D  E LM +E +RRQL  G  Y  Y AL+ N+VPC   G SYY+C  R  + P
Sbjct:    41 DDELESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNP 94


>TAIR|locus:2130724 [details] [associations]
            symbol:RALFL33 "ralf-like 33" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] [GO:0009505 "plant-type cell wall" evidence=IDA]
            [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0048046 GO:GO:0019722 GO:GO:0005179
            GO:GO:0007267 GO:GO:0004871 GO:GO:0009505 EMBL:Z97339 EMBL:AL117321
            InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626 EMBL:BT025592
            EMBL:AK226956 EMBL:AY088306 IPI:IPI00526605 RefSeq:NP_567476.1
            UniGene:At.19870 EnsemblPlants:AT4G15800.1 GeneID:827260
            KEGG:ath:AT4G15800 TAIR:At4g15800 eggNOG:NOG273542
            InParanoid:Q8L9P8 OMA:KCNGTIA PhylomeDB:Q8L9P8 ProtClustDB:PLN03222
            Genevestigator:Q8L9P8 Uniprot:Q8L9P8
        Length = 116

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 25/45 (55%), Positives = 29/45 (64%)

Query:    41 EMLMPTEDSRRQLLGTWYSSYGALEGNSVPCDAPGSSYYNCNGRG 85
             E  M +E +RR L  T Y SYGAL  N+VPC   G+SYYNC  RG
Sbjct:    55 EFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCR-RG 98


>TAIR|locus:2079787 [details] [associations]
            symbol:RALFL22 "ralf-like 22" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006598
            "polyamine catabolic process" evidence=RCA] [GO:0009698
            "phenylpropanoid metabolic process" evidence=RCA] [GO:0042398
            "cellular modified amino acid biosynthetic process" evidence=RCA]
            [GO:0048767 "root hair elongation" evidence=RCA] GO:GO:0009506
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0048046 GO:GO:0019722
            GO:GO:0005179 GO:GO:0007267 GO:GO:0004871 EMBL:AC009606
            InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626 EMBL:BT002767
            EMBL:BT024562 EMBL:AY088700 IPI:IPI00534711 RefSeq:NP_566253.1
            UniGene:At.43157 PRIDE:Q9MA62 EnsemblPlants:AT3G05490.1
            GeneID:819714 KEGG:ath:AT3G05490 TAIR:At3g05490 eggNOG:NOG296454
            InParanoid:Q9MA62 OMA:EEMEFDS PhylomeDB:Q9MA62
            ProtClustDB:CLSN2917098 Genevestigator:Q9MA62 Uniprot:Q9MA62
        Length = 119

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 30/66 (45%), Positives = 37/66 (56%)

Query:    23 GSSSW--GRINNINR-VEDPNEMLMPTEDSRRQLLGTWYSSYGALEGNSVPCDAPGSSYY 79
             GSSS   G   +I   + +  EM   ++ SRR L    Y SYGA+  NSVPC   G+SYY
Sbjct:    37 GSSSLFSGCTGSIAECIAEEEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYY 96

Query:    80 NCNGRG 85
             NC  RG
Sbjct:    97 NCQ-RG 101


>TAIR|locus:504955964 [details] [associations]
            symbol:RALFL19 "ralf-like 19" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002685 GO:GO:0048046 GO:GO:0019722
            GO:GO:0005179 GO:GO:0007267 GO:GO:0004871 EMBL:U78721
            InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626 EMBL:BT011714
            EMBL:AK220918 IPI:IPI00545015 RefSeq:NP_850219.1 UniGene:At.48547
            PRIDE:Q6NME6 EnsemblPlants:AT2G33775.1 GeneID:817944
            KEGG:ath:AT2G33775 TAIR:At2g33775 eggNOG:NOG288947
            InParanoid:Q6NME6 OMA:ANATWTL PhylomeDB:Q6NME6
            ProtClustDB:CLSN2679386 Genevestigator:Q6NME6 Uniprot:Q6NME6
        Length = 110

 Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 24/50 (48%), Positives = 30/50 (60%)

Query:    41 EMLMPTEDSRRQLLGTW-YSSYGALEGNSVPCDAPGSSYYNCNGRGLSRP 89
             + LM +E +RRQL     Y SYGAL  N+VPC   G SYY+C  R  + P
Sbjct:    45 DYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANP 94


>TAIR|locus:2024730 [details] [associations]
            symbol:RALF1 "rapid alkalinization factor 1" species:3702
            "Arabidopsis thaliana" [GO:0005576 "extracellular region"
            evidence=ISM] [GO:0004871 "signal transducer activity"
            evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=ISS]
            [GO:0048046 "apoplast" evidence=ISS] [GO:0019722 "calcium-mediated
            signaling" evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0048046 GO:GO:0019722 GO:GO:0005179 GO:GO:0007267
            GO:GO:0004871 EMBL:AC009525 InterPro:IPR008801 Pfam:PF05498
            HOGENOM:HOG000237626 EMBL:BT010174 IPI:IPI00548392 PIR:D86159
            RefSeq:NP_171789.1 UniGene:At.42574 PRIDE:Q9SRY3
            EnsemblPlants:AT1G02900.1 GeneID:839389 KEGG:ath:AT1G02900
            TAIR:At1g02900 eggNOG:NOG265823 InParanoid:Q9SRY3 OMA:SIAECIG
            PhylomeDB:Q9SRY3 ProtClustDB:CLSN2912735 Genevestigator:Q9SRY3
            Uniprot:Q9SRY3
        Length = 120

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 27/68 (39%), Positives = 35/68 (51%)

Query:    22 HGSSSWGRINNINRVEDPNEMLMPTEDSRRQLLGTWYSSYGALEGNSVPCDAPGSSYYNC 81
             +GS   G I      E+     M +E +RR L  T Y SY +L+ NSVPC   G+SYYNC
Sbjct:    43 NGSGCHGSIAECIGAEEEE---MDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNC 99

Query:    82 NGRGLSRP 89
                  + P
Sbjct:   100 QNGAQANP 107


>TAIR|locus:2089323 [details] [associations]
            symbol:RALF23 "rapid alkalinization factor 23"
            species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
            region" evidence=ISM] [GO:0004871 "signal transducer activity"
            evidence=TAS] [GO:0007267 "cell-cell signaling" evidence=ISS]
            [GO:0048046 "apoplast" evidence=ISS] [GO:0009741 "response to
            brassinosteroid stimulus" evidence=IEP] [GO:0045926 "negative
            regulation of growth" evidence=IMP] [GO:0030003 "cellular cation
            homeostasis" evidence=RCA] [GO:0070838 "divalent metal ion
            transport" evidence=RCA] GO:GO:0009742 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0048046 GO:GO:0019722 GO:GO:0005179
            GO:GO:0007267 GO:GO:0004871 GO:GO:0045926 EMBL:AB022217
            GO:GO:0009741 InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626
            EMBL:AY048301 EMBL:AY072630 EMBL:AY084588 IPI:IPI00517151
            RefSeq:NP_566555.1 UniGene:At.24650 STRING:Q9LUS7 PRIDE:Q9LUS7
            EnsemblPlants:AT3G16570.1 GeneID:820907 KEGG:ath:AT3G16570
            TAIR:At3g16570 eggNOG:NOG298130 InParanoid:Q9LUS7 OMA:PPFETEC
            PhylomeDB:Q9LUS7 ProtClustDB:PLN03221 Genevestigator:Q9LUS7
            Uniprot:Q9LUS7
        Length = 138

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 23/45 (51%), Positives = 28/45 (62%)

Query:    41 EMLMPTEDSRRQLLGTWYSSYGALEGNSVPCDAPGSSYYNCNGRG 85
             E  M +E +RR L    Y SYGAL  N++PC   G+SYYNC  RG
Sbjct:    76 EFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCR-RG 119


>TAIR|locus:2129261 [details] [associations]
            symbol:RALFL31 "ralf-like 31" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0048046
            GO:GO:0019722 GO:GO:0005179 GO:GO:0007267 EMBL:Z97335 GO:GO:0004871
            EMBL:AL161537 InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626
            ProtClustDB:CLSN2688711 EMBL:BT024552 EMBL:AY085773 IPI:IPI00519686
            IPI:IPI00545425 PIR:D71400 RefSeq:NP_567413.1 UniGene:At.20340
            EnsemblPlants:AT4G13950.1 GeneID:827029 KEGG:ath:AT4G13950
            TAIR:At4g13950 eggNOG:NOG277228 InParanoid:Q2HIM9 OMA:TITRCAR
            PhylomeDB:Q2HIM9 Genevestigator:Q2HIM9 Uniprot:Q2HIM9
        Length = 113

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 23/49 (46%), Positives = 29/49 (59%)

Query:    34 NRVEDPNEMLMPTEDSRRQLLGTW-YSSYGALEGNSVPCDAPGSSYYNC 81
             N +   +E LMPTE SRR L+    Y  Y  L  + VPC  PG+SYY+C
Sbjct:    38 NSIIGEDEDLMPTEISRRVLMAQKRYIGYETLRRDMVPCQKPGASYYDC 86


>TAIR|locus:505006366 [details] [associations]
            symbol:RALFL24 "ralf-like 24" species:3702 "Arabidopsis
            thaliana" [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007267
            "cell-cell signaling" evidence=ISS] [GO:0048046 "apoplast"
            evidence=ISS] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0048046
            GO:GO:0019722 GO:GO:0005179 GO:GO:0007267 EMBL:AP000377
            GO:GO:0004871 InterPro:IPR008801 Pfam:PF05498 HOGENOM:HOG000237626
            EMBL:BX825164 IPI:IPI00533279 RefSeq:NP_566740.1 UniGene:At.37645
            PRIDE:Q9LK37 EnsemblPlants:AT3G23805.1 GeneID:821963
            KEGG:ath:AT3G23805 TAIR:At3g23805 eggNOG:NOG250947
            InParanoid:Q9LK37 OMA:SVITRCA PhylomeDB:Q9LK37
            ProtClustDB:CLSN2688711 Genevestigator:Q9LK37 Uniprot:Q9LK37
        Length = 118

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 21/46 (45%), Positives = 28/46 (60%)

Query:    37 EDPNEMLMPTEDSRR-QLLGTWYSSYGALEGNSVPCDAPGSSYYNC 81
             E+  E +MP+E SRR  ++   Y SY  L  + VPC  PG+SYY C
Sbjct:    46 EEEGEEMMPSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYAC 91


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.128   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      101        88   0.00091  102 3  11 23  0.41    30
                                                     29  0.49    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  574 (61 KB)
  Total size of DFA:  119 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.09u 0.11s 10.20t   Elapsed:  00:00:00
  Total cpu time:  10.09u 0.11s 10.20t   Elapsed:  00:00:00
  Start:  Mon May 20 15:42:33 2013   End:  Mon May 20 15:42:33 2013

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