BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034223
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L9P8|RLF33_ARATH Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1
Length = 116
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 3 LKVVMMLFMVAAAVVDSSAH----GSSSWGRINNINRVEDPNEMLMPTEDSRRQLLGTWY 58
+ ++ + F+ AA SS S G I + E M +E +RR L T Y
Sbjct: 13 IAILTVHFLFAAVTSQSSGDFVPIESKCNGTIAECSLSTAEEEFEMDSEINRRILATTKY 72
Query: 59 SSYGALEGNSVPCDAPGSSYYNC 81
SYGAL N+VPC G+SYYNC
Sbjct: 73 ISYGALRRNTVPCSRRGASYYNC 95
>sp|Q9FZA0|RLF4_ARATH Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1
Length = 110
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 1 MDLKVVMMLFMVAAAVVDSSAHGSSSWGR--INNINRVEDPNEM--LMPTEDSRRQLL-G 55
M +K++++ ++ A+V S + + + IN + + +E+ LM +E +RRQL G
Sbjct: 1 MGVKMLLIFGLLILAMVAKSVNATYPLTKSCINGQGCIGEDDELESLMDSETNRRQLARG 60
Query: 56 TWYSSYGALEGNSVPCDAPGSSYYNCNGRGLSRP 89
Y Y AL+ N+VPC G SYY+C R + P
Sbjct: 61 RRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNP 94
>sp|Q2HIM9|RLF31_ARATH Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1
Length = 113
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 6 VMMLFMVAAAVVDSSAHGSSSWGRINNINRVEDPNEMLMPTEDSRRQLLGTW-YSSYGAL 64
++ L + A A S +G I N ED E LMPTE SRR L+ Y Y L
Sbjct: 12 ILFLLISADAFPIPSPNGEIDAMLIRNSIIGED--EDLMPTEISRRVLMAQKRYIGYETL 69
Query: 65 EGNSVPCDAPGSSYYNC 81
+ VPC PG+SYY+C
Sbjct: 70 RRDMVPCQKPGASYYDC 86
>sp|Q6NME6|RLF19_ARATH Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1
Length = 110
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 41 EMLMPTEDSRRQLLGTW-YSSYGALEGNSVPCDAPGSSYYNCNGRGLSRP 89
+ LM +E +RRQL Y SYGAL N+VPC G SYY+C R + P
Sbjct: 45 DYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANP 94
>sp|Q945T0|RALF_TOBAC Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1
SV=1
Length = 115
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 5 VVMMLFMVAAAVVDSSAH--------GSSSWGRINNINRVEDPNEMLMPTEDSRRQLLGT 56
++ F+ AA DS A+ G G I + + E + +E +RR L
Sbjct: 12 LIGAFFISMAAAGDSGAYDWVMPARSGGGCKGSIGEC--IAEEEEFELDSESNRRILATK 69
Query: 57 WYSSYGALEGNSVPCDAPGSSYYNCN 82
Y SYGAL+ NSVPC G+SYYNC
Sbjct: 70 KYISYGALQKNSVPCSRRGASYYNCK 95
>sp|Q9SRY3|RLF1_ARATH Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1
Length = 120
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 19 SSAHGSSSWGRINNINRVEDPNEMLMPTEDSRRQLLGTWYSSYGALEGNSVPCDAPGSSY 78
S HGS I E M +E +RR L T Y SY +L+ NSVPC G+SY
Sbjct: 45 SGCHGS--------IAECIGAEEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASY 96
Query: 79 YNCNGRGLSRP 89
YNC + P
Sbjct: 97 YNCQNGAQANP 107
>sp|Q9MA62|RLF22_ARATH Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1
Length = 119
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 46 TEDSRRQLLGTWYSSYGALEGNSVPCDAPGSSYYNCN 82
++ SRR L Y SYGA+ NSVPC G+SYYNC
Sbjct: 63 SDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQ 99
>sp|Q9LUS7|RLF23_ARATH Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23
PE=1 SV=1
Length = 138
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 46 TEDSRRQLLGTWYSSYGALEGNSVPCDAPGSSYYNC 81
+E +RR L Y SYGAL N++PC G+SYYNC
Sbjct: 81 SEINRRILATRRYISYGALRRNTIPCSRRGASYYNC 116
>sp|Q9LK37|RLF24_ARATH Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1
Length = 118
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 45 PTEDSRR-QLLGTWYSSYGALEGNSVPCDAPGSSYYNC 81
P+E SRR ++ Y SY L + VPC PG+SYY C
Sbjct: 54 PSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYAC 91
>sp|Q9FHA6|RLF34_ARATH Protein RALF-like 34 OS=Arabidopsis thaliana GN=RALFL34 PE=2 SV=1
Length = 129
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 57 WYSSYGALEGNSVPCDA-PGSSYYNCN 82
+Y SYGAL N VPC G SYY N
Sbjct: 80 YYISYGALSANRVPCPPRSGRSYYTHN 106
>sp|Q5R7G9|NUAK2_PONAB NUAK family SNF1-like kinase 2 OS=Pongo abelii GN=NUAK2 PE=2 SV=1
Length = 628
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 14 AAVVDSSAHGSSSWGRINNINRVEDPNEMLMPTEDSRRQLLGTWY--SSYGALEGNSVPC 71
A + D ++H +WG + E P+E P DS R + W SS LE + C
Sbjct: 292 ATLEDVASHWWVNWGYATRVGEQEAPHEGGHPGSDSARASMADWLRRSSRPLLENGAKVC 351
Query: 72 D-----APG 75
APG
Sbjct: 352 SFFKQHAPG 360
>sp|Q9H093|NUAK2_HUMAN NUAK family SNF1-like kinase 2 OS=Homo sapiens GN=NUAK2 PE=1 SV=1
Length = 628
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 14 AAVVDSSAHGSSSWGRINNINRVEDPNEMLMPTEDSRRQLLGTWY--SSYGALEGNSVPC 71
A + D ++H +WG + E P+E P DS R + W SS LE + C
Sbjct: 292 ATLEDVASHWWVNWGYATRVGEQEAPHEGGHPGSDSARASMADWLRRSSRPLLENGAKVC 351
Query: 72 D-----APG 75
APG
Sbjct: 352 SFFKQHAPG 360
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,834,727
Number of Sequences: 539616
Number of extensions: 1396859
Number of successful extensions: 3008
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2996
Number of HSP's gapped (non-prelim): 14
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)