BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 034225
         (101 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6IQ23|PKHA7_HUMAN Pleckstrin homology domain-containing family A member 7 OS=Homo
            sapiens GN=PLEKHA7 PE=1 SV=2
          Length = 1121

 Score = 31.2 bits (69), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 4    PELAEKAVAMAEKRLSVDQWPEYYDTQSGRFI-GKQSRLHQTWTIAGYLT 52
            PELA  +  MA+  L +      Y T  GR + G  SRL Q+ TIA Y+T
Sbjct: 988  PELATLSGDMAQPSLGLVGPESRYQTLPGRGLSGSTSRLQQSSTIAPYVT 1037


>sp|Q3UIL6|PKHA7_MOUSE Pleckstrin homology domain-containing family A member 7 OS=Mus
            musculus GN=Plekha7 PE=1 SV=2
          Length = 1118

 Score = 30.0 bits (66), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 4    PELAEKAVAMAEKRLSVDQWPEYYDTQSGRFI-GKQSRLHQTWTIAGYLT 52
            PELA  +  + +  LS+      Y T  GR + G  SRL Q+ TIA Y+T
Sbjct: 985  PELASLSGDVPQPSLSLVGSESRYQTLPGRGLSGSTSRLQQSSTIAPYVT 1034


>sp|F4K4R6|GEX2_ARATH Protein GAMETE EXPRESSED 2 OS=Arabidopsis thaliana GN=GEX2 PE=2
           SV=1
          Length = 914

 Score = 28.9 bits (63), Expect = 9.8,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 31/64 (48%)

Query: 11  VAMAEKRLSVDQWPEYYDTQSGRFIGKQSRLHQTWTIAGYLTSKMLLENPAKASLLFWEE 70
           ++ + K++   ++     +++G F G  +  H  W ++GY++   +L    K  LL  +E
Sbjct: 66  ISFSGKKMEFQEFSLSLISENGSFAGVLNSTHIRWIVSGYISIDFVLVTSGKFLLLVEKE 125

Query: 71  DYEL 74
              L
Sbjct: 126 SQTL 129


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.131    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,393,904
Number of Sequences: 539616
Number of extensions: 1136444
Number of successful extensions: 2680
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2678
Number of HSP's gapped (non-prelim): 14
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)