BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034226
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q78P75|DYL2_RAT Dynein light chain 2, cytoplasmic OS=Rattus norvegicus GN=Dynll2
PE=1 SV=1
Length = 89
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGNPI 95
FG+ +
Sbjct: 62 FGSYV 66
>sp|Q9D0M5|DYL2_MOUSE Dynein light chain 2, cytoplasmic OS=Mus musculus GN=Dynll2 PE=1
SV=1
Length = 89
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGNPI 95
FG+ +
Sbjct: 62 FGSYV 66
>sp|Q96FJ2|DYL2_HUMAN Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1
SV=1
Length = 89
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGNPI 95
FG+ +
Sbjct: 62 FGSYV 66
>sp|Q3MHR3|DYL2_BOVIN Dynein light chain 2, cytoplasmic OS=Bos taurus GN=DYNLL2 PE=3
SV=1
Length = 89
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGNPI 95
FG+ +
Sbjct: 62 FGSYV 66
>sp|Q24117|DYL1_DROME Dynein light chain 1, cytoplasmic OS=Drosophila melanogaster
GN=ctp PE=1 SV=1
Length = 89
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 52/65 (80%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM E++Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGNPI 95
FG+ +
Sbjct: 62 FGSYV 66
>sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm OS=Heliocidaris
crassispina PE=3 SV=1
Length = 89
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM ED+Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGNPI 95
FG+ +
Sbjct: 62 FGSYV 66
>sp|O96860|DYL2_DROME Dynein light chain 2, cytoplasmic OS=Drosophila melanogaster
GN=Cdlc2 PE=3 SV=1
Length = 89
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 52/65 (80%)
Query: 31 SGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSN 90
S ++ +IK+ADM E++Q++AVD A A EK ++EKD+A IKK+FDKK+ PTWHCIVG N
Sbjct: 2 SDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRN 61
Query: 91 FGNPI 95
FG+ +
Sbjct: 62 FGSYV 66
>sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 91
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 51/68 (75%)
Query: 28 VSQSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIV 87
++ + +IK+ADM E++Q +AVD A A EK ++EKD+A IKK+FD+KH PTWHCIV
Sbjct: 1 MASGSSKAVIKNADMSEEMQADAVDCATQALEKYNIEKDIAAYIKKEFDRKHNPTWHCIV 60
Query: 88 GSNFGNPI 95
G NFG+ +
Sbjct: 61 GRNFGSYV 68
>sp|Q22799|DYL1_CAEEL Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans
GN=dlc-1 PE=1 SV=1
Length = 89
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 51/63 (80%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM +D+Q++A+D A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 NPI 95
+ +
Sbjct: 64 SYV 66
>sp|P63170|DYL1_RAT Dynein light chain 1, cytoplasmic OS=Rattus norvegicus GN=Dynll1
PE=1 SV=1
Length = 89
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 NPI 95
+ +
Sbjct: 64 SYV 66
>sp|P63169|DYL1_RABIT Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus
GN=DYNLL1 PE=1 SV=1
Length = 89
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 NPI 95
+ +
Sbjct: 64 SYV 66
>sp|P63168|DYL1_MOUSE Dynein light chain 1, cytoplasmic OS=Mus musculus GN=Dynll1 PE=1
SV=1
Length = 89
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 NPI 95
+ +
Sbjct: 64 SYV 66
>sp|P61273|DYL1_MACFA Dynein light chain 1, cytoplasmic OS=Macaca fascicularis
GN=DYNLL1 PE=3 SV=1
Length = 89
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 NPI 95
+ +
Sbjct: 64 SYV 66
>sp|P63167|DYL1_HUMAN Dynein light chain 1, cytoplasmic OS=Homo sapiens GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 NPI 95
+ +
Sbjct: 64 SYV 66
>sp|P61285|DYL1_BOVIN Dynein light chain 1, cytoplasmic OS=Bos taurus GN=DYNLL1 PE=1
SV=1
Length = 89
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 51/63 (80%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM E++Q+++V+ A A EK ++EKD+A IKK+FDKK+ PTWHCIVG NFG
Sbjct: 4 RKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFG 63
Query: 93 NPI 95
+ +
Sbjct: 64 SYV 66
>sp|O94111|DYL1_EMENI Dynein light chain, cytoplasmic OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nudG PE=3 SV=1
Length = 94
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 47/59 (79%)
Query: 37 IKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGNPI 95
IKS DM ED+Q+EAV++AI A EK +EKD+A+ IK++FD + G TWHC+VG NFG+ +
Sbjct: 13 IKSVDMSEDMQQEAVEVAIEAMEKYHIEKDIAQYIKREFDSRKGATWHCVVGRNFGSFV 71
>sp|Q94758|DYL1_SCHMA Dynein light chain OS=Schistosoma mansoni GN=DLC PE=1 SV=1
Length = 89
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 8/78 (10%)
Query: 30 QSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGS 89
S ++ +IK+ADM E++Q++A+ IA A +K+ +EKD+A IKKDFD+K+ PTWHCIVG
Sbjct: 1 MSERKAVIKNADMSEEMQEDAIHIAAGAIDKHDLEKDIAANIKKDFDRKYHPTWHCIVGR 60
Query: 90 NFG--------NPIYFHF 99
+FG N IYF+
Sbjct: 61 HFGSYVTHETHNFIYFYL 78
>sp|Q94748|DYL2_SCHMA Probable dynein light chain OS=Schistosoma mansoni PE=3 SV=1
Length = 89
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 33 KRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFG 92
++ +IK+ADM ED+Q+ AV A AA +K +EKDVA IKK+FD+K+ P WHCIVG +FG
Sbjct: 4 RKAVIKNADMHEDMQETAVHTAAAALDKYEIEKDVAAYIKKEFDRKYNPNWHCIVGKHFG 63
Query: 93 NPI 95
+ +
Sbjct: 64 SYV 66
>sp|Q9UR05|DYL1_SCHPO Dynein light chain 1, cytoplasmic OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dlc2 PE=3 SV=1
Length = 85
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 46/60 (76%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGNPI 95
+IK+ DM E +Q+EA+ A+ A EK ++EKD+A IK++FDKK PTWHCIVG NFG+ +
Sbjct: 3 VIKAVDMSEKMQQEAIHAAVQAMEKFTIEKDIAAFIKREFDKKFSPTWHCIVGRNFGSFV 62
>sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic OS=Dictyostelium discoideum
GN=dlcB PE=3 SV=1
Length = 91
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%), Gaps = 9/77 (11%)
Query: 31 SGKRII-IKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGS 89
S K II +K+ADM + +Q++A + I AFE+ ++E+D+A IKK+FDKK+ PTWHCIVG
Sbjct: 3 SNKYIINVKNADMPDFMQQDATECTIKAFEETNIERDIAMIIKKEFDKKYSPTWHCIVGK 62
Query: 90 NFG--------NPIYFH 98
+FG N IYF+
Sbjct: 63 SFGSFVTHETKNFIYFN 79
>sp|Q759T0|DYL1_ASHGO Dynein light chain 1, cytoplasmic OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DYN2
PE=3 SV=1
Length = 88
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGNPI 95
I+K++D+ ++L+ E I++ A E+ +E++VA IKK+ D KHG TWH IVG NFG+ +
Sbjct: 6 ILKASDITDELRDEIFGISVQAVEQFQLEREVAAYIKKELDSKHGQTWHVIVGKNFGSYV 65
>sp|Q6FUJ0|DYL1_CANGA Dynein light chain 1, cytoplasmic OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DYN2 PE=3 SV=1
Length = 86
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 46/62 (74%)
Query: 34 RIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGN 93
++I+K++DM +++Q+E IA A ++++E+++A IKK+ D ++G TWH IVG +FG+
Sbjct: 3 QVIVKASDMGDEMQQEVFRIAEEAMREHTLEREIASVIKKEMDSRYGHTWHVIVGRSFGS 62
Query: 94 PI 95
+
Sbjct: 63 YV 64
>sp|Q02647|DYL1_YEAST Dynein light chain 1, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DYN2 PE=1 SV=1
Length = 92
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGNPI 95
I+K++D+ + L+++ + I+ A +K +E+D+A +KK D K+G TWH IVG NFG+ +
Sbjct: 10 IVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYV 69
>sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=DYN2 PE=3 SV=1
Length = 91
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 44/68 (64%)
Query: 28 VSQSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIV 87
+S+ + I+K++D+ E++Q +++ A +EKD+A +KK+ D+ +G TWH IV
Sbjct: 1 MSEKEQEPILKASDLPEEMQTRIFELSNEAVSNYKIEKDIATYLKKELDQLYGATWHVIV 60
Query: 88 GSNFGNPI 95
G +FG+ +
Sbjct: 61 GKSFGSYV 68
>sp|Q6CWX4|DYL1_KLULA Dynein light chain 1, cytoplasmic OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DYN2 PE=3 SV=1
Length = 87
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGNPI 95
++K++D+ ++L+ E +++ A +E+++A IKK D G TWH IVG NFG+ +
Sbjct: 5 VLKASDITDELRDEIFELSSNATANYKLEREIAAYIKKQLDVSQGETWHVIVGKNFGSYV 64
Query: 96 -----YFHFF 100
YF +F
Sbjct: 65 THEKGYFVYF 74
>sp|Q9DCM4|DNAL4_MOUSE Dynein light chain 4, axonemal OS=Mus musculus GN=Dnal4 PE=2 SV=2
Length = 105
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKD-VAERIKKDFDKKHGPTWHCIVGSNFG-- 92
+++ +DM E+++ E +++ + A EK S + A+ IK+ DKK G +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 93 ------NPIYFHF 99
N +Y +F
Sbjct: 81 ITHEVKNLLYLYF 93
>sp|A4F4L4|DNAL4_PIG Dynein light chain 4, axonemal OS=Sus scrofa GN=DNAL4 PE=3 SV=1
Length = 105
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKD-VAERIKKDFDKKHGPTWHCIVGSNFG-- 92
+++ +DM E+++ E +++ + A EK S + A+ IK+ DKK G +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 93 ------NPIYFHF 99
N +Y +F
Sbjct: 81 ITHEVKNLLYLYF 93
>sp|O96015|DNAL4_HUMAN Dynein light chain 4, axonemal OS=Homo sapiens GN=DNAL4 PE=2 SV=1
Length = 105
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKD-VAERIKKDFDKKHGPTWHCIVGSNFG-- 92
+++ +DM E+++ E +++ + A EK S + A+ IK+ DKK G +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 93 ------NPIYFHF 99
N +Y +F
Sbjct: 81 ITHEVKNLLYLYF 93
>sp|Q32KN5|DNAL4_BOVIN Dynein light chain 4, axonemal OS=Bos taurus GN=DNAL4 PE=3 SV=1
Length = 105
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Query: 36 IIKSADMKEDLQKEAVDIAIAAFEKNSVEKD-VAERIKKDFDKKHGPTWHCIVGSNFG-- 92
+++ +DM E+++ E +++ + A EK S + A+ IK+ DKK G +WH ++G FG
Sbjct: 21 LVRHSDMPEEMRVETMELCVTACEKFSNNNESAAKMIKETMDKKFGSSWHVVIGEGFGFE 80
Query: 93 ------NPIYFHF 99
N +Y +F
Sbjct: 81 ITHEVKNLLYLYF 93
>sp|Q21557|DYL2_CAEEL Probable dynein light chain 2, cytoplasmic OS=Caenorhabditis
elegans GN=dlc-2 PE=3 SV=2
Length = 90
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 30 QSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPTWHCIVGS 89
S ++I +K DM++ + + + A +++KDVA +K++ DKK G TWH I G
Sbjct: 1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATWHVICGK 60
Query: 90 NFGNPIYF---HF 99
FG+ + + HF
Sbjct: 61 CFGSRVSYEMGHF 73
>sp|Q39579|DYL2_CHLRE Dynein 11 kDa light chain, flagellar outer arm OS=Chlamydomonas
reinhardtii PE=1 SV=1
Length = 120
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 9/74 (12%)
Query: 29 SQSGKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVEKDVAERIKKDFDKKHGPT------ 82
SQ +II ++ M E +++AV IA+ A +K KD+A IK ++DKK+ +
Sbjct: 17 SQHFYKII--TSYMPESFEQDAVQIALIAVDKYRQLKDIAFYIKHEYDKKYPGSGKATEG 74
Query: 83 -WHCIVGSNFGNPI 95
+HCIVG +F + +
Sbjct: 75 VYHCIVGKSFASAV 88
>sp|Q7MTW6|KDSB_PORGI 3-deoxy-manno-octulosonate cytidylyltransferase OS=Porphyromonas
gingivalis (strain ATCC BAA-308 / W83) GN=kdsB PE=3 SV=1
Length = 254
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 32 GKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVE-KDVAERIKKD--FDKKHGPTWHCIVG 88
G++I++ + +QKE +D+ I+AF+K + +AE D F++ + P IV
Sbjct: 90 GEKIVLNLQGDEPFIQKEQIDLLISAFDKPETDIATLAEVFSSDVSFERLNNPNSPKIVL 149
Query: 89 SNFGNPIYF 97
+ G +YF
Sbjct: 150 DHGGYALYF 158
>sp|B2RLM4|KDSB_PORG3 3-deoxy-manno-octulosonate cytidylyltransferase OS=Porphyromonas
gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257)
GN=kdsB PE=3 SV=1
Length = 254
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 32 GKRIIIKSADMKEDLQKEAVDIAIAAFEKNSVE-KDVAERIKKD--FDKKHGPTWHCIVG 88
G++I++ + +QKE +D+ I+AF+K + +AE D F++ + P IV
Sbjct: 90 GEKIVLNLQGDEPFIQKEQIDLLISAFDKPETDIATLAEVFSSDASFERLNNPNSPKIVL 149
Query: 89 SNFGNPIYF 97
+ G +YF
Sbjct: 150 DHGGYALYF 158
>sp|P27346|DHE2_CLODI NAD-specific glutamate dehydrogenase OS=Clostridium difficile
GN=gluD PE=3 SV=1
Length = 421
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 44 EDLQKEAVDIAIAAFEKNSVEKDVAERIKKDF--DKKHGPT 82
E+ VDI I A +NS+ K+VAE IK + +GPT
Sbjct: 286 EEFWASDVDIVIPAALENSITKEVAESIKAKLVCEAANGPT 326
>sp|Q03829|YM39_YEAST Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR166C PE=1
SV=1
Length = 368
Score = 28.9 bits (63), Expect = 9.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 61 NSVEKDVAERIKKDFDKKHGPTWHCIVGSNFGNPI 95
N+ + D + + D D+ P WHC+V G I
Sbjct: 32 NNRKDDKLHKKRGDSDEDLSPIWHCVVSGGIGGKI 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,047,760
Number of Sequences: 539616
Number of extensions: 1228237
Number of successful extensions: 4282
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 4237
Number of HSP's gapped (non-prelim): 64
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)