BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>034227
MGVSRNWVTFLRGLFLLLLICRSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHV
DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV

High Scoring Gene Products

Symbol, full name Information P value
AT2G17850 protein from Arabidopsis thaliana 4.4e-20
STR18
AT5G66170
protein from Arabidopsis thaliana 5.7e-20
AT2G21045 protein from Arabidopsis thaliana 1.2e-17
NRIP1
Chloroplast N receptor-interacting protein 1
protein from Nicotiana benthamiana 7.1e-13
SEN1
AT4G35770
protein from Arabidopsis thaliana 1.5e-12
STR16
AT5G66040
protein from Arabidopsis thaliana 3.5e-11
AT2G42220 protein from Arabidopsis thaliana 2.6e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  034227
        (100 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2827795 - symbol:AT2G17850 "AT2G17850" species...   238  4.4e-20   1
TAIR|locus:2156882 - symbol:STR18 "AT5G66170" species:370...   237  5.7e-20   1
TAIR|locus:505006261 - symbol:AT2G21045 species:3702 "Ara...   215  1.2e-17   1
UNIPROTKB|B2C7Y6 - symbol:NRIP1 "Chloroplast N receptor-i...   170  7.1e-13   1
TAIR|locus:2128038 - symbol:SEN1 "AT4G35770" species:3702...   167  1.5e-12   1
TAIR|locus:2156937 - symbol:STR16 "AT5G66040" species:370...   154  3.5e-11   1
TAIR|locus:2059999 - symbol:AT2G42220 "AT2G42220" species...    70  2.6e-05   2


>TAIR|locus:2827795 [details] [associations]
            symbol:AT2G17850 "AT2G17850" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
            "aging" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0001666 "response to hypoxia" evidence=RCA] [GO:0009862
            "systemic acquired resistance, salicylic acid mediated signaling
            pathway" evidence=RCA] [GO:0010089 "xylem development"
            evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
            metabolic process" evidence=RCA] [GO:0044036 "cell wall
            macromolecule metabolic process" evidence=RCA] PROSITE:PS00380
            PROSITE:PS00683 Pfam:PF00581 EMBL:CP002685 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            IPI:IPI00539448 RefSeq:NP_565426.2 UniGene:At.52790
            ProteinModelPortal:F4IPI4 SMR:F4IPI4 PRIDE:F4IPI4
            EnsemblPlants:AT2G17850.1 GeneID:816295 KEGG:ath:AT2G17850
            TAIR:At2g17850 OMA:SHIKGAT Uniprot:F4IPI4
        Length = 156

 Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
 Identities = 43/77 (55%), Positives = 58/77 (75%)

Query:    24 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPD 83
             S  +VIT+DV  A+ LL+SGY +LDVRT EEFK+GHVD+  +FN+PY   TP+G+  NP+
Sbjct:    28 SEPKVITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDSENVFNVPYWLYTPQGQEINPN 87

Query:    84 FLKKVRSLCKEEDRLVV 100
             FLK V SLC + D L++
Sbjct:    88 FLKHVSSLCNQTDHLIL 104


>TAIR|locus:2156882 [details] [associations]
            symbol:STR18 "AT5G66170" species:3702 "Arabidopsis
            thaliana" [GO:0007568 "aging" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0004792 "thiosulfate
            sulfurtransferase activity" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] Pfam:PF00581 GO:GO:0005737 EMBL:CP002688
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0004792 IPI:IPI00657087 RefSeq:NP_001032159.1
            UniGene:At.24500 ProteinModelPortal:F4JZ39 SMR:F4JZ39 PRIDE:F4JZ39
            EnsemblPlants:AT5G66170.2 GeneID:836749 KEGG:ath:AT5G66170
            OMA:CEAAKIV PhylomeDB:F4JZ39 Uniprot:F4JZ39
        Length = 138

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 45/74 (60%), Positives = 58/74 (78%)

Query:    27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK 86
             EV++VDV  AK LL+SG+ YLDVRT +EF+ GH +AAKI NIPYM NTP+GRVKN +FL+
Sbjct:    13 EVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLE 72

Query:    87 KVRSLCKEEDRLVV 100
             +V SL    D ++V
Sbjct:    73 QVSSLLNPADDILV 86


>TAIR|locus:505006261 [details] [associations]
            symbol:AT2G21045 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0007568 "aging"
            evidence=ISS;TAS] [GO:0000041 "transition metal ion transport"
            evidence=RCA] [GO:0006826 "iron ion transport" evidence=RCA]
            [GO:0010106 "cellular response to iron ion starvation"
            evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
            [GO:0010359 "regulation of anion channel activity" evidence=RCA]
            [GO:0015706 "nitrate transport" evidence=RCA] [GO:0048767 "root
            hair elongation" evidence=RCA] PROSITE:PS00380 PROSITE:PS00683
            Pfam:PF00581 GO:GO:0005739 EMBL:CP002685 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            EMBL:AC006234 EMBL:AC006264 HOGENOM:HOG000247776 EMBL:AK227791
            EMBL:BT008306 IPI:IPI00536036 RefSeq:NP_565497.3 UniGene:At.39614
            ProteinModelPortal:Q8RUD6 SMR:Q8RUD6 PRIDE:Q8RUD6
            EnsemblPlants:AT2G21045.1 GeneID:816639 KEGG:ath:AT2G21045
            TAIR:At2g21045 InParanoid:Q8RUD6 OMA:RTNEEFA PhylomeDB:Q8RUD6
            ProtClustDB:CLSN2681696 Genevestigator:Q8RUD6 Uniprot:Q8RUD6
        Length = 169

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 43/74 (58%), Positives = 54/74 (72%)

Query:    27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK 86
             +V TVDV  AK  L +G+ YLDVRT EEF + HV+ A   NIPYMF T EGRV NPDFL 
Sbjct:    40 DVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEA--LNIPYMFKTDEGRVINPDFLS 97

Query:    87 KVRSLCKEEDRLVV 100
             +V S+CK+++ L+V
Sbjct:    98 QVASVCKKDEHLIV 111


>UNIPROTKB|B2C7Y6 [details] [associations]
            symbol:NRIP1 "Chloroplast N receptor-interacting protein 1"
            species:4100 "Nicotiana benthamiana" [GO:0005515 "protein binding"
            evidence=IPI] Pfam:PF00581 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 EMBL:EU332890
            EMBL:EU332891 SMR:B2C7Y6 IntAct:B2C7Y6 Uniprot:B2C7Y6
        Length = 185

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 34/71 (47%), Positives = 47/71 (66%)

Query:    30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
             +V VR A  LL++G+ YLDVRTAEEF +GH   A   NIPYMF    G +KNP+F ++V 
Sbjct:    75 SVPVRVALELLQAGHRYLDVRTAEEFSDGHAPGA--INIPYMFRIGSGMIKNPNFAEQVL 132

Query:    90 SLCKEEDRLVV 100
                 ++D ++V
Sbjct:   133 EHFGKDDEIIV 143


>TAIR|locus:2128038 [details] [associations]
            symbol:SEN1 "AT4G35770" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
            "aging" evidence=IEP;ISS] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0006979 "response to oxidative stress"
            evidence=IEP] [GO:0009611 "response to wounding" evidence=IEP]
            [GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
            [GO:0009744 "response to sucrose stimulus" evidence=RCA]
            [GO:0009750 "response to fructose stimulus" evidence=RCA]
            PROSITE:PS00380 PROSITE:PS00683 Pfam:PF00581 GO:GO:0009507
            EMBL:CP002687 GO:GO:0009753 GO:GO:0006979 GO:GO:0009611
            GO:GO:0007568 EMBL:AL161588 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0009579
            EMBL:AL031135 EMBL:U26944 EMBL:U26945 EMBL:AY078973 EMBL:AY091671
            EMBL:AY085192 IPI:IPI00534149 PIR:T04682 RefSeq:NP_001078496.1
            RefSeq:NP_195302.1 UniGene:At.24896 UniGene:At.67197
            ProteinModelPortal:Q38853 SMR:Q38853 IntAct:Q38853 STRING:Q38853
            PRIDE:Q38853 EnsemblPlants:AT4G35770.1 GeneID:829730
            KEGG:ath:AT4G35770 TAIR:At4g35770 HOGENOM:HOG000015173
            InParanoid:Q38853 OMA:NTTSRIG PhylomeDB:Q38853
            ProtClustDB:CLSN2685305 BRENDA:2.8.1.1 Genevestigator:Q38853
            Uniprot:Q38853
        Length = 182

 Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 32/71 (45%), Positives = 46/71 (64%)

Query:    30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
             +V VR A+ L ++GY YLDVRT +EF  GH   A   N+PYM+    G VKNP FL++V 
Sbjct:    72 SVPVRVARELAQAGYRYLDVRTPDEFSIGHPTRA--INVPYMYRVGSGMVKNPSFLRQVS 129

Query:    90 SLCKEEDRLVV 100
             S  ++ D +++
Sbjct:   130 SHFRKHDEIII 140


>TAIR|locus:2156937 [details] [associations]
            symbol:STR16 "AT5G66040" species:3702 "Arabidopsis
            thaliana" [GO:0007568 "aging" evidence=ISS] [GO:0009507
            "chloroplast" evidence=ISM;IDA] [GO:0004792 "thiosulfate
            sulfurtransferase activity" evidence=IDA] [GO:0006569 "tryptophan
            catabolic process" evidence=RCA] [GO:0009684 "indoleacetic acid
            biosynthetic process" evidence=RCA] PROSITE:PS00380 PROSITE:PS00683
            Pfam:PF00581 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 EMBL:AB011474 eggNOG:COG0607 HOGENOM:HOG000247776
            GO:GO:0004792 BRENDA:2.8.1.1 EMBL:X89036 EMBL:AY049302
            EMBL:BT000864 EMBL:AY084763 IPI:IPI00531957 PIR:S58275
            RefSeq:NP_851278.1 UniGene:At.23333 PDB:1TQ1 PDBsum:1TQ1
            ProteinModelPortal:Q39129 SMR:Q39129 STRING:Q39129 PaxDb:Q39129
            PRIDE:Q39129 EnsemblPlants:AT5G66040.1 GeneID:836734
            KEGG:ath:AT5G66040 GeneFarm:4731 TAIR:At5g66040 InParanoid:Q39129
            OMA:CGAINVP PhylomeDB:Q39129 SABIO-RK:Q39129
            EvolutionaryTrace:Q39129 Genevestigator:Q39129 Uniprot:Q39129
        Length = 120

 Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
 Identities = 33/71 (46%), Positives = 44/71 (61%)

Query:    30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
             +V V  A +LL +G+ YLDVRT EEF +GH   A   N+PYM     G  KNPDFL++V 
Sbjct:    10 SVSVTVAHDLLLAGHRYLDVRTPEEFSQGHACGA--INVPYMNRGASGMSKNPDFLEQVS 67

Query:    90 SLCKEEDRLVV 100
             S   + D ++V
Sbjct:    68 SHFGQSDNIIV 78


>TAIR|locus:2059999 [details] [associations]
            symbol:AT2G42220 "AT2G42220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid membrane"
            evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
            [GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
            [GO:0019344 "cysteine biosynthetic process" evidence=RCA]
            [GO:0019684 "photosynthesis, light reaction" evidence=RCA]
            PROSITE:PS00380 PROSITE:PS00683 Pfam:PF00581 GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            EMBL:AC002561 GO:GO:0009535 EMBL:AY045616 IPI:IPI00520188
            PIR:T00931 RefSeq:NP_565969.1 UniGene:At.12443 UniGene:At.48581
            ProteinModelPortal:O48529 SMR:O48529 STRING:O48529 PaxDb:O48529
            PRIDE:O48529 EnsemblPlants:AT2G42220.1 GeneID:818822
            KEGG:ath:AT2G42220 TAIR:At2g42220 HOGENOM:HOG000243044
            InParanoid:O48529 OMA:VCAYLFI PhylomeDB:O48529
            ProtClustDB:CLSN2688883 Genevestigator:O48529 Uniprot:O48529
        Length = 234

 Score = 70 (29.7 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
 Identities = 17/50 (34%), Positives = 29/50 (58%)

Query:    26 AEVITVDVRAAKNLL-ESGYGYLDVRTAEEFKEGHVDAAKIFNIP-YMFN 73
             AE+  V+   AK L+ E GY  +DVR   +F+  H+ +    +IP +++N
Sbjct:    47 AELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCS--HIPLFIYN 94

 Score = 51 (23.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
 Identities = 11/29 (37%), Positives = 19/29 (65%)

Query:    72 FNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100
             F  P  +V NP+FLK VR+   ++ +L++
Sbjct:   116 FGLPFTKV-NPEFLKSVRNEFSQDSKLLL 143


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      100        90   0.00091  102 3  11 22  0.48    29
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  549 (58 KB)
  Total size of DFA:  109 KB (2073 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.26u 0.09s 10.35t   Elapsed:  00:00:02
  Total cpu time:  10.26u 0.09s 10.35t   Elapsed:  00:00:02
  Start:  Fri May 10 18:07:02 2013   End:  Fri May 10 18:07:04 2013

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