BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034227
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IPI4|STR17_ARATH Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana
GN=STR17 PE=2 SV=1
Length = 156
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 8/98 (8%)
Query: 11 LRGLFLLLLI--------CRSSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDA 62
LR LL ++ S +VIT+DV A+ LL+SGY +LDVRT EEFK+GHVD+
Sbjct: 7 LRSFLLLFIVFNHLPRTTTSMSEPKVITIDVNQAQKLLDSGYTFLDVRTVEEFKKGHVDS 66
Query: 63 AKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100
+FN+PY TP+G+ NP+FLK V SLC + D L++
Sbjct: 67 ENVFNVPYWLYTPQGQEINPNFLKHVSSLCNQTDHLIL 104
>sp|Q9FKW8|STR18_ARATH Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana GN=STR18
PE=1 SV=1
Length = 136
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 58/74 (78%)
Query: 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK 86
EV++VDV AK LL+SG+ YLDVRT +EF+ GH +AAKI NIPYM NTP+GRVKN +FL+
Sbjct: 13 EVVSVDVSQAKTLLQSGHQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLE 72
Query: 87 KVRSLCKEEDRLVV 100
+V SL D ++V
Sbjct: 73 QVSSLLNPADDILV 86
>sp|Q8RUD6|STR19_ARATH Rhodanese-like domain-containing protein 19, mitochondrial
OS=Arabidopsis thaliana GN=STR19 PE=2 SV=1
Length = 169
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
Query: 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLK 86
+V TVDV AK L +G+ YLDVRT EEF + HV+ A NIPYMF T EGRV NPDFL
Sbjct: 40 DVETVDVYTAKGFLSTGHRYLDVRTNEEFAKSHVEEA--LNIPYMFKTDEGRVINPDFLS 97
Query: 87 KVRSLCKEEDRLVV 100
+V S+CK+++ L+V
Sbjct: 98 QVASVCKKDEHLIV 111
>sp|Q38853|STR15_ARATH Rhodanese-like domain-containing protein 15, chloroplastic
OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1
Length = 182
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
+V VR A+ L ++GY YLDVRT +EF GH + N+PYM+ G VKNP FL++V
Sbjct: 72 SVPVRVARELAQAGYRYLDVRTPDEFSIGH--PTRAINVPYMYRVGSGMVKNPSFLRQVS 129
Query: 90 SLCKEEDRLVV 100
S ++ D +++
Sbjct: 130 SHFRKHDEIII 140
>sp|P27626|DIN1_RAPSA Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2
SV=1
Length = 183
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
+V VR A+ L ++GY +LDVRT +EF GH ++ N+PYM+ G VKNP FL++V
Sbjct: 73 SVPVRVARELAQAGYKHLDVRTPDEFSIGH--PSRAINVPYMYRVGSGMVKNPSFLRQVS 130
Query: 90 SLCKEEDRLVV 100
S ++ D +++
Sbjct: 131 SHFRKHDEIII 141
>sp|Q39129|STR16_ARATH Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis
thaliana GN=STR16 PE=1 SV=2
Length = 120
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 30 TVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
+V V A +LL +G+ YLDVRT EEF +GH A N+PYM G KNPDFL++V
Sbjct: 10 SVSVTVAHDLLLAGHRYLDVRTPEEFSQGH--ACGAINVPYMNRGASGMSKNPDFLEQVS 67
Query: 90 SLCKEEDRLVV 100
S + D ++V
Sbjct: 68 SHFGQSDNIIV 78
>sp|O48529|STR9_ARATH Rhodanese-like domain-containing protein 9, chloroplastic
OS=Arabidopsis thaliana GN=STR9 PE=2 SV=1
Length = 234
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 28/101 (27%)
Query: 25 GAEVITVDVRAAKNLL-ESGYGYLDVRTAEEFKEGHVDAAKIFNIP-------------- 69
AE+ V+ AK L+ E GY +DVR +F+ H+ + +IP
Sbjct: 46 AAELKFVNAEEAKQLIAEEGYSVVDVRDKTQFERAHIKSCS--HIPLFIYNEDNDIGTII 103
Query: 70 ----------YMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100
F P +V NP+FLK VR+ ++ +L++
Sbjct: 104 KRTVHNNFSGLFFGLPFTKV-NPEFLKSVRNEFSQDSKLLL 143
>sp|A3LQU0|ATG4_PICST Probable cysteine protease ATG4 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=ATG4 PE=3 SV=2
Length = 514
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 48 DVRTAEEFKEGHVDAA-KI--FNIPYMFNTPEGRVKNPDFLKKVRSLCKEED 96
D+ + E FK+ +DAA KI F+ PE R KN +F+ RS K+ED
Sbjct: 377 DLTSYENFKKSCLDAANKIVHFHATERSTVPESRRKNSEFVNINRSDLKDED 428
>sp|Q0I891|COXX_SYNS3 Protoheme IX farnesyltransferase OS=Synechococcus sp. (strain
CC9311) GN=ctaB PE=3 SV=1
Length = 327
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 2 GVSRNWVTFLRGLFLLLLICRSSGAEVITVDVRAAKNLLESGY 44
G+ R + +L G+ LLL++ R SGA + VRA ++L G+
Sbjct: 280 GLFRWSILYLFGVCLLLVMSRMSGAAQFDLQVRAVVDILSGGF 322
>sp|Q94A65|STR14_ARATH Rhodanese-like domain-containing protein 14, chloroplastic
OS=Arabidopsis thaliana GN=At4g27700 PE=2 SV=1
Length = 224
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 20/92 (21%)
Query: 28 VITVDVRAAKNLL-ESGYGYLDVRTAEEFKEGHV------------------DAAKIFNI 68
V +VDV+ A+ L E+ + LDVR E+K GH D A+
Sbjct: 74 VRSVDVKEAQRLQKENNFVILDVRPEAEYKAGHPPGAINVEMYRLIREWTAWDIARRLGF 133
Query: 69 PYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100
+ F G +NP+F++ V + +E +++V
Sbjct: 134 AF-FGIFSGTEENPEFIQSVEAKLDKEAKIIV 164
>sp|P70232|CHL1_MOUSE Neural cell adhesion molecule L1-like protein OS=Mus musculus
GN=Chl1 PE=1 SV=2
Length = 1209
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 69 PYMFNTPEGRVKNPDFLKKVR 89
PY+F TPEG + P FLK ++
Sbjct: 906 PYIFQTPEGVPEQPSFLKVIK 926
>sp|O00533|CHL1_HUMAN Neural cell adhesion molecule L1-like protein OS=Homo sapiens
GN=CHL1 PE=1 SV=4
Length = 1208
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 69 PYMFNTPEGRVKNPDFLKKVR 89
PY+F TPEG + P FLK ++
Sbjct: 906 PYIFQTPEGVPEQPTFLKVIK 926
>sp|P51335|MOEB_PORPU Probable molybdopterin-synthase adenylyltransferase OS=Porphyra
purpurea GN=moeB PE=3 SV=1
Length = 382
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 19 LICRSSGAEVITVDVRAAKN-LLESGYGY--LDVRTAEEFKEGHVDAAKIFNIP 69
L+ +S V +DV +N L + + Y LDVR+ EE++E H+D K N+P
Sbjct: 264 LLVGNSSYPVQEIDVIELQNELYRNSFKYIILDVRSKEEYEESHLD--KAVNLP 315
>sp|P37700|GUNG_CLOCE Endoglucanase G OS=Clostridium cellulolyticum (strain ATCC 35319 /
DSM 5812 / JCM 6584 / H10) GN=celCCG PE=1 SV=2
Length = 725
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 23 SSGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNI-PYMFNT----PEG 77
+S V +D A K L G +DV+ A+ +K+G++DA + + Y+ T P+G
Sbjct: 666 NSDKNVDALDFAALKKYLLGGTSSIDVKAADTYKDGNIDAIDMATLKKYLLGTITQLPQG 725
>sp|B8ZQ59|LACG_STRPJ 6-phospho-beta-galactosidase OS=Streptococcus pneumoniae (strain
ATCC 700669 / Spain 23F-1) GN=lacG PE=3 SV=1
Length = 468
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 35 AAKNLLESGYGYLDVRTAE----EFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKK 87
A + +GYG ++V+ E F E H + F + F+TPE N DFL +
Sbjct: 76 AWSRIFPTGYGQVNVKGVEFYHNLFAECHKRHVEPFVTLHHFDTPEALHSNGDFLNR 132
>sp|Q6MUC7|END4_MYCMS Probable endonuclease 4 OS=Mycoplasma mycoides subsp. mycoides SC
(strain PG1) GN=nfo PE=3 SV=1
Length = 289
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 27 EVITVDVRAAKNLLES--------GYGYL--DVRTAEEFKEGHVDAAKIFNIPYMFNTPE 76
+V+ + + +KN++ S GYGY+ D F + + +KI PY+ TP
Sbjct: 213 KVLCIHLNDSKNMISSHKDRHANIGYGYVGFDTLVNVVFDKDFSNISKILETPYIDKTPP 272
Query: 77 GRVKNPDFLKKV 88
+++ D L K
Sbjct: 273 YKIEIEDLLNKT 284
>sp|Q07192|MP2K2_XENLA Dual specificity mitogen-activated protein kinase kinase 2
(Fragment) OS=Xenopus laevis GN=map2k2 PE=1 SV=1
Length = 446
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 18/91 (19%)
Query: 22 RSSGAEVITVDVRAAKNLLE-------SGYGYLDVR-------TAEEFKE-GHVDAAKIF 66
R+SGA+ ++ + +A KN LE G L + TAE+ K+ G +
Sbjct: 102 RTSGAKALSTNEQATKNRLERLRTHSIESSGKLKLSPEQHWDFTAEDLKDLGEIGRGAYG 161
Query: 67 NIPYMFNTPEGRVKNPDFLKKVRSLCKEEDR 97
++ M +TP G++ +K++RS E+++
Sbjct: 162 SVNKMSHTPSGQIMA---VKRIRSTVDEKEQ 189
>sp|Q1AS60|SYE2_RUBXD Glutamate--tRNA ligase 2 OS=Rubrobacter xylanophilus (strain DSM
9941 / NBRC 16129) GN=gltX2 PE=3 SV=1
Length = 496
Score = 29.3 bits (64), Expect = 8.2, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 24/56 (42%)
Query: 34 RAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVR 89
RAA+ LLESG Y D T EE A P P + + L++VR
Sbjct: 96 RAARRLLESGAAYYDFATPEELTRFRQRARAEGRPPIYTGGPYREMDPEEALRRVR 151
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,408,011
Number of Sequences: 539616
Number of extensions: 1277769
Number of successful extensions: 4137
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4121
Number of HSP's gapped (non-prelim): 19
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)