Query 034227
Match_columns 100
No_of_seqs 110 out of 1471
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 19:07:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034227.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034227hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tq1_A AT5G66040, senescence-a 99.6 6E-15 2E-19 95.2 6.1 75 24-100 13-87 (129)
2 3iwh_A Rhodanese-like domain p 99.5 6.6E-15 2.3E-19 92.4 3.9 59 28-100 1-61 (103)
3 1gmx_A GLPE protein; transfera 99.5 4.8E-14 1.7E-18 88.1 6.0 61 26-100 2-63 (108)
4 3foj_A Uncharacterized protein 99.4 6.2E-14 2.1E-18 86.6 3.9 59 28-100 1-61 (100)
5 3eme_A Rhodanese-like domain p 99.4 8.5E-14 2.9E-18 86.3 3.9 59 28-100 1-61 (103)
6 3gk5_A Uncharacterized rhodane 99.4 2.2E-13 7.6E-18 85.4 5.1 58 28-100 3-60 (108)
7 3d1p_A Putative thiosulfate su 99.4 5.7E-13 1.9E-17 86.5 5.3 73 25-100 19-96 (139)
8 1wv9_A Rhodanese homolog TT165 99.3 1.3E-13 4.5E-18 84.3 0.8 42 28-71 1-42 (94)
9 3ilm_A ALR3790 protein; rhodan 99.3 4.9E-12 1.7E-16 82.9 5.0 57 31-100 2-61 (141)
10 3flh_A Uncharacterized protein 99.3 3.1E-12 1.1E-16 81.8 4.0 59 28-100 14-76 (124)
11 1qxn_A SUD, sulfide dehydrogen 99.2 9.4E-12 3.2E-16 81.1 5.5 64 25-100 19-87 (137)
12 3g5j_A Putative ATP/GTP bindin 99.2 4E-12 1.4E-16 81.1 3.5 41 27-71 3-43 (134)
13 3hix_A ALR3790 protein; rhodan 99.2 1E-11 3.5E-16 77.5 4.2 53 35-100 2-57 (106)
14 2fsx_A RV0390, COG0607: rhodan 99.2 3.1E-11 1.1E-15 79.2 6.6 69 27-100 3-85 (148)
15 1t3k_A Arath CDC25, dual-speci 99.2 3.5E-12 1.2E-16 84.5 1.8 65 26-100 25-90 (152)
16 2hhg_A Hypothetical protein RP 99.2 2.4E-11 8.2E-16 78.5 5.5 45 25-71 18-66 (139)
17 1e0c_A Rhodanese, sulfurtransf 99.2 4.1E-11 1.4E-15 84.9 6.6 70 29-100 9-86 (271)
18 2k0z_A Uncharacterized protein 99.2 8E-12 2.7E-16 78.4 2.3 58 27-100 3-61 (110)
19 3olh_A MST, 3-mercaptopyruvate 99.2 8.7E-11 3E-15 85.2 7.7 69 30-100 176-259 (302)
20 3i2v_A Adenylyltransferase and 99.2 1.2E-11 4.1E-16 78.4 2.7 42 29-72 1-44 (127)
21 1urh_A 3-mercaptopyruvate sulf 99.2 8.3E-11 2.9E-15 83.8 7.3 70 29-100 152-235 (280)
22 1hzm_A Dual specificity protei 99.2 2.7E-11 9.2E-16 79.4 4.3 72 26-100 13-97 (154)
23 3nhv_A BH2092 protein; alpha-b 99.2 8.8E-12 3E-16 81.9 2.0 43 29-73 16-61 (144)
24 1rhs_A Sulfur-substituted rhod 99.1 9.1E-11 3.1E-15 84.4 7.1 70 29-100 160-245 (296)
25 1c25_A CDC25A; hydrolase, cell 99.1 4.4E-11 1.5E-15 79.2 4.9 46 24-71 18-70 (161)
26 2vsw_A Dual specificity protei 99.1 5.9E-11 2E-15 77.8 5.1 41 29-71 4-47 (153)
27 2a2k_A M-phase inducer phospha 99.1 5.7E-11 1.9E-15 79.7 5.1 46 24-71 19-71 (175)
28 3hzu_A Thiosulfate sulfurtrans 99.1 9.7E-11 3.3E-15 85.5 6.7 68 30-100 180-264 (318)
29 2j6p_A SB(V)-AS(V) reductase; 99.1 1E-10 3.5E-15 77.2 5.8 43 26-71 2-49 (152)
30 2jtq_A Phage shock protein E; 99.1 4E-11 1.4E-15 71.7 2.9 45 43-100 1-46 (85)
31 1uar_A Rhodanese; sulfurtransf 99.1 2.9E-10 9.9E-15 81.0 7.4 69 30-100 147-238 (285)
32 2gwf_A Ubiquitin carboxyl-term 99.1 1.2E-10 4.2E-15 77.4 4.5 47 25-73 16-65 (157)
33 1whb_A KIAA0055; deubiqutinati 99.1 1.8E-10 6E-15 76.4 5.0 47 25-73 11-60 (157)
34 1qb0_A Protein (M-phase induce 99.0 2E-10 6.9E-15 79.6 5.2 45 25-71 40-91 (211)
35 1vee_A Proline-rich protein fa 99.0 1.7E-10 5.9E-15 74.5 4.1 66 27-100 3-79 (134)
36 3ics_A Coenzyme A-disulfide re 99.0 1.5E-10 5.1E-15 89.7 4.3 63 24-100 484-546 (588)
37 4f67_A UPF0176 protein LPG2838 99.0 3.4E-10 1.2E-14 81.5 5.6 65 26-100 119-186 (265)
38 1urh_A 3-mercaptopyruvate sulf 99.0 3.4E-10 1.2E-14 80.6 5.6 70 29-100 4-91 (280)
39 1e0c_A Rhodanese, sulfurtransf 99.0 2.3E-10 7.9E-15 81.0 4.5 70 29-100 147-228 (271)
40 3aay_A Putative thiosulfate su 99.0 3.6E-10 1.2E-14 80.3 5.4 70 29-100 6-82 (277)
41 2ouc_A Dual specificity protei 99.0 2.2E-10 7.5E-15 73.4 3.6 41 29-71 1-50 (142)
42 1rhs_A Sulfur-substituted rhod 99.0 9.7E-10 3.3E-14 79.0 6.9 70 29-100 8-97 (296)
43 3olh_A MST, 3-mercaptopyruvate 99.0 9.9E-10 3.4E-14 79.6 6.9 71 28-100 21-112 (302)
44 3f4a_A Uncharacterized protein 99.0 9E-11 3.1E-15 79.1 1.0 46 23-71 25-78 (169)
45 3aay_A Putative thiosulfate su 99.0 1.1E-09 3.8E-14 77.7 6.7 67 31-100 146-231 (277)
46 3hzu_A Thiosulfate sulfurtrans 99.0 6.6E-10 2.3E-14 81.1 5.2 71 28-100 39-116 (318)
47 1uar_A Rhodanese; sulfurtransf 98.9 6.4E-10 2.2E-14 79.2 4.4 71 28-100 7-84 (285)
48 3tg1_B Dual specificity protei 98.9 8.6E-10 3E-14 73.0 4.5 49 22-72 4-61 (158)
49 1yt8_A Thiosulfate sulfurtrans 98.9 1.8E-09 6.2E-14 83.6 6.4 62 26-100 4-68 (539)
50 3tp9_A Beta-lactamase and rhod 98.9 6.7E-10 2.3E-14 84.4 3.6 60 27-100 372-432 (474)
51 1okg_A Possible 3-mercaptopyru 98.9 1.6E-09 5.6E-14 80.8 5.4 70 28-100 13-100 (373)
52 3op3_A M-phase inducer phospha 98.9 9.4E-10 3.2E-14 77.0 3.8 45 25-71 53-104 (216)
53 3tp9_A Beta-lactamase and rhod 98.9 1E-09 3.5E-14 83.3 4.1 63 25-100 269-331 (474)
54 2wlr_A Putative thiosulfate su 98.9 2.1E-09 7.3E-14 80.9 5.4 69 30-100 273-363 (423)
55 1yt8_A Thiosulfate sulfurtrans 98.9 2.6E-09 9E-14 82.7 5.8 60 27-100 375-435 (539)
56 3ntd_A FAD-dependent pyridine 98.8 6.1E-10 2.1E-14 85.5 0.5 62 24-100 468-529 (565)
57 2wlr_A Putative thiosulfate su 98.8 5.5E-09 1.9E-13 78.6 5.6 70 29-100 124-208 (423)
58 2eg4_A Probable thiosulfate su 98.7 6.4E-09 2.2E-13 72.2 2.9 58 30-100 122-189 (230)
59 1okg_A Possible 3-mercaptopyru 98.6 3.7E-08 1.3E-12 73.5 5.2 58 41-100 172-251 (373)
60 3utn_X Thiosulfate sulfurtrans 98.6 8E-08 2.7E-12 70.9 6.8 69 30-100 185-280 (327)
61 2eg4_A Probable thiosulfate su 98.5 1E-07 3.5E-12 66.1 5.2 56 42-100 5-66 (230)
62 3r2u_A Metallo-beta-lactamase 98.5 1.3E-08 4.3E-13 77.6 0.0 51 36-100 379-430 (466)
63 3utn_X Thiosulfate sulfurtrans 98.5 3.5E-07 1.2E-11 67.4 7.3 75 24-100 23-118 (327)
64 3r2u_A Metallo-beta-lactamase 98.4 1.7E-07 5.7E-12 71.4 4.2 47 42-100 295-341 (466)
65 1v8c_A MOAD related protein; r 94.9 0.0036 1.2E-07 42.0 -0.6 23 44-72 122-144 (168)
66 2f46_A Hypothetical protein; s 94.6 0.062 2.1E-06 34.7 5.0 64 30-100 29-107 (156)
67 4erc_A Dual specificity protei 61.4 5.4 0.00018 24.5 2.4 39 32-70 24-63 (150)
68 2img_A Dual specificity protei 60.0 6 0.00021 24.2 2.4 39 32-70 25-64 (151)
69 1ywf_A Phosphotyrosine protein 33.7 69 0.0023 22.5 4.7 44 28-71 53-101 (296)
70 1fpz_A Cyclin-dependent kinase 21.1 1.5E+02 0.005 19.2 4.3 25 33-57 61-86 (212)
No 1
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.55 E-value=6e-15 Score=95.23 Aligned_cols=75 Identities=41% Similarity=0.625 Sum_probs=62.6
Q ss_pred cCCCcceeCHHHHHHHhhCCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 24 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 24 ~~~~~~~i~~~e~~~~~~~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
.....+.|+++++.++++++.+|||||+++||+.|||| ||+|+|+..+..+|.+.+.++.++..+.++++++||+
T Consensus 13 ~~~~~~~is~~e~~~~l~~~~~lIDvR~~~e~~~ghIp--gAinip~~~~~~~~~~~~~~~~~~~~~~l~~~~~ivv 87 (129)
T 1tq1_A 13 ESRVPSSVSVTVAHDLLLAGHRYLDVRTPEEFSQGHAC--GAINVPYMNRGASGMSKNTDFLEQVSSHFGQSDNIIV 87 (129)
T ss_dssp CSCCCEEEEHHHHHHHHHHTCCEEEESCHHHHHHCCBT--TBEECCSCCCSTTTCCCTTTHHHHHTTTCCTTSSEEE
T ss_pred hcCCCcccCHHHHHHHhcCCCEEEECCCHHHHhcCCCC--CcEECcHhhcccccccCCHHHHHHHHhhCCCCCeEEE
Confidence 44577899999999988767899999999999999999 9999999766666777766777776555788899875
No 2
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.52 E-value=6.6e-15 Score=92.39 Aligned_cols=59 Identities=22% Similarity=0.236 Sum_probs=47.7
Q ss_pred cceeCHHHHHHHhh--CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 28 VITVDVRAAKNLLE--SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 28 ~~~i~~~e~~~~~~--~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
+++||++|+++++. ++.+|||||+++||+.|||| ||+|+|++ ++.+.+.+ +++++++|+
T Consensus 1 ~k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIp--gA~~ip~~-----------~l~~~~~~-l~~~~~ivv 61 (103)
T 3iwh_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIP--NAKLIPMD-----------TIPDNLNS-FNKNEIYYI 61 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCT--TCEECCGG-----------GGGGCGGG-CCTTSEEEE
T ss_pred CCCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccC--CcccCccc-----------chhhhhhh-hcCCCeEEE
Confidence 47899999999886 35899999999999999999 99999986 33333333 678888764
No 3
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.49 E-value=4.8e-14 Score=88.13 Aligned_cols=61 Identities=18% Similarity=0.273 Sum_probs=51.5
Q ss_pred CCcceeCHHHHHHHhh-CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 26 AEVITVDVRAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 26 ~~~~~i~~~e~~~~~~-~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
..++.|+++++.++++ ++.+|||||++.||+.|||| ||+|+|+. ++.+.+.+ ++++++||+
T Consensus 2 ~~~~~i~~~~l~~~~~~~~~~liDvR~~~e~~~ghIp--gA~~ip~~-----------~l~~~~~~-l~~~~~ivv 63 (108)
T 1gmx_A 2 DQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAV--QAFHLTND-----------TLGAFMRD-NDFDTPVMV 63 (108)
T ss_dssp CSCEEECHHHHHHHHHTTCCEEEECSCHHHHHHCEET--TCEECCHH-----------HHHHHHHH-SCTTSCEEE
T ss_pred CcccccCHHHHHHHHhCCCCEEEEcCCHHHHHhCCCc--cCEeCCHH-----------HHHHHHHh-cCCCCCEEE
Confidence 4578999999999987 46899999999999999999 99999985 55555555 788888874
No 4
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.44 E-value=6.2e-14 Score=86.64 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=47.1
Q ss_pred cceeCHHHHHHHhh--CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 28 VITVDVRAAKNLLE--SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 28 ~~~i~~~e~~~~~~--~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
++.|+++|+.++++ ++.++||||+++||+.|||| ||+|+|+.. +.+.+.+ ++++++||+
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIp--gA~~ip~~~-----------l~~~~~~-l~~~~~ivv 61 (100)
T 3foj_A 1 MESITVTELKEKILDANPVNIVDVRTDQETAMGIIP--GAETIPMNS-----------IPDNLNY-FNDNETYYI 61 (100)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCT--TCEECCGGG-----------GGGCGGG-SCTTSEEEE
T ss_pred CCccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCC--CCEECCHHH-----------HHHHHHh-CCCCCcEEE
Confidence 46899999999984 46899999999999999999 999999963 2223333 677888764
No 5
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.43 E-value=8.5e-14 Score=86.35 Aligned_cols=59 Identities=22% Similarity=0.236 Sum_probs=47.1
Q ss_pred cceeCHHHHHHHhh--CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 28 VITVDVRAAKNLLE--SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 28 ~~~i~~~e~~~~~~--~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
++.|+++++.+++. ++.++||||+++||+.|||| ||+|+|+. ++.+.+.. ++++++||+
T Consensus 1 ~~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIp--gA~~ip~~-----------~l~~~~~~-l~~~~~iv~ 61 (103)
T 3eme_A 1 MKSITTDELKNKLLESKPVQIVDVRTDEETAMGYIP--NAKLIPMD-----------TIPDNLNS-FNKNEIYYI 61 (103)
T ss_dssp CCEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCT--TCEECCGG-----------GGGGCGGG-CCTTSEEEE
T ss_pred CCccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCC--CCEEcCHH-----------HHHHHHHh-CCCCCeEEE
Confidence 36899999999884 46899999999999999999 99999986 23233333 577888764
No 6
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.41 E-value=2.2e-13 Score=85.45 Aligned_cols=58 Identities=21% Similarity=0.333 Sum_probs=49.4
Q ss_pred cceeCHHHHHHHhhCCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 28 VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 28 ~~~i~~~e~~~~~~~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
++.|+++++.+++++ .+|||||+++||+.|||| ||+|+|+. ++.+.+.. ++++++||+
T Consensus 3 ~~~is~~el~~~l~~-~~iiDvR~~~e~~~ghIp--gA~~ip~~-----------~l~~~~~~-l~~~~~ivv 60 (108)
T 3gk5_A 3 YRSINAADLYENIKA-YTVLDVREPFELIFGSIA--NSINIPIS-----------ELREKWKI-LERDKKYAV 60 (108)
T ss_dssp CCEECHHHHHHTTTT-CEEEECSCHHHHTTCBCT--TCEECCHH-----------HHHHHGGG-SCTTSCEEE
T ss_pred ccEeCHHHHHHHHcC-CEEEECCCHHHHhcCcCC--CCEEcCHH-----------HHHHHHHh-CCCCCeEEE
Confidence 678999999998877 899999999999999999 99999985 55555544 688888874
No 7
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.37 E-value=5.7e-13 Score=86.47 Aligned_cols=73 Identities=18% Similarity=0.327 Sum_probs=53.3
Q ss_pred CCCcceeCHHHHHHHhh---CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCH-HHHHHHHhh-cCCCCcee
Q 034227 25 GAEVITVDVRAAKNLLE---SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNP-DFLKKVRSL-CKEEDRLV 99 (100)
Q Consensus 25 ~~~~~~i~~~e~~~~~~---~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~-~~~~~~~~~-~~~~~~vi 99 (100)
...++.|+++++.++++ ++.+|||||+++||+.|||| ||+|+|+..+. ++...++ +|.+.+... ++++++||
T Consensus 19 ~~~~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIp--gAinip~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~iv 95 (139)
T 3d1p_A 19 VSNIQSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIP--ASINVPYRSHP-DAFALDPLEFEKQIGIPKPDSAKELI 95 (139)
T ss_dssp -CCCEECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCT--TCEECCTTTCT-TGGGSCHHHHHHHHSSCCCCTTSEEE
T ss_pred CCCcceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCC--CcEEcCHHHhh-hhccCCHHHHHHHHhccCCCCCCeEE
Confidence 45788999999999986 36899999999999999999 99999987552 2222222 444444322 56788887
Q ss_pred C
Q 034227 100 V 100 (100)
Q Consensus 100 v 100 (100)
+
T Consensus 96 v 96 (139)
T 3d1p_A 96 F 96 (139)
T ss_dssp E
T ss_pred E
Confidence 4
No 8
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.34 E-value=1.3e-13 Score=84.27 Aligned_cols=42 Identities=24% Similarity=0.144 Sum_probs=36.0
Q ss_pred cceeCHHHHHHHhhCCCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 28 VITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 28 ~~~i~~~e~~~~~~~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
++.|+++++.++++++.++||||+++||+.|||| ||+|+|+.
T Consensus 1 ~~~is~~~l~~~~~~~~~liDvR~~~e~~~ghi~--gAi~ip~~ 42 (94)
T 1wv9_A 1 MRKVRPEELPALLEEGVLVVDVRPADRRSTPLPF--AAEWVPLE 42 (94)
T ss_dssp -CEECGGGHHHHHHTTCEEEECCCC--CCSCCSS--CCEECCHH
T ss_pred CCcCCHHHHHHHHHCCCEEEECCCHHHHhcccCC--CCEECCHH
Confidence 3679999999988777899999999999999999 99999985
No 9
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.26 E-value=4.9e-12 Score=82.93 Aligned_cols=57 Identities=25% Similarity=0.461 Sum_probs=47.2
Q ss_pred eCHHHHHHHhh-C--CCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 31 VDVRAAKNLLE-S--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 31 i~~~e~~~~~~-~--~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
||++++.++++ + +.+|||||++.||+.|||| ||+|+|+. ++.+.+...++++++||+
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIp--gAi~ip~~-----------~l~~~~~~~l~~~~~ivv 61 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIM--GAMAMPIE-----------DLVDRASSSLEKSRDIYV 61 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEET--TCEECCGG-----------GHHHHHHTTSCTTSEEEE
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCC--CCEEcCHH-----------HHHHHHHhcCCCCCeEEE
Confidence 78999999987 2 4799999999999999999 99999996 455555444788888874
No 10
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.26 E-value=3.1e-12 Score=81.84 Aligned_cols=59 Identities=20% Similarity=0.317 Sum_probs=48.6
Q ss_pred cceeCHHHHHHHhh-C--CCeEEecCChhhH-hccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 28 VITVDVRAAKNLLE-S--GYGYLDVRTAEEF-KEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 28 ~~~i~~~e~~~~~~-~--~~~lIDvR~~~e~-~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
...|+++++.++++ + +.+|||||++.|| +.|||| ||+|+|+. ++.+.+.. ++++++||+
T Consensus 14 ~~~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIp--gA~nip~~-----------~l~~~~~~-l~~~~~ivv 76 (124)
T 3flh_A 14 SLYIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIK--GAIAMPAK-----------DLATRIGE-LDPAKTYVV 76 (124)
T ss_dssp TTEECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEET--TCEECCHH-----------HHHHHGGG-SCTTSEEEE
T ss_pred cceecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCC--CCEECCHH-----------HHHHHHhc-CCCCCeEEE
Confidence 36799999999987 3 3899999999998 999999 99999985 55555554 788888875
No 11
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.24 E-value=9.4e-12 Score=81.05 Aligned_cols=64 Identities=23% Similarity=0.304 Sum_probs=50.3
Q ss_pred CCCcceeCHHHHHHHhh-C-CCeEEecCChhhHhc-cC--CCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCcee
Q 034227 25 GAEVITVDVRAAKNLLE-S-GYGYLDVRTAEEFKE-GH--VDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLV 99 (100)
Q Consensus 25 ~~~~~~i~~~e~~~~~~-~-~~~lIDvR~~~e~~~-gh--Ip~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~vi 99 (100)
...++.|+++++.++++ + +.+|||||+++||+. || || ||+|+|+..+ .....+.. ++++++||
T Consensus 19 ~~~~~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~Ip--gAinip~~~l---------~~~~~~~~-l~~~~~iv 86 (137)
T 1qxn_A 19 KADMVMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVK--NYKHMSRGKL---------EPLLAKSG-LDPEKPVV 86 (137)
T ss_dssp HHSSEEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCS--SEEECCTTTS---------HHHHHHHC-CCTTSCEE
T ss_pred hccCcccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCC--CCEEcchHHh---------hhHHhhcc-CCCCCeEE
Confidence 45678999999999987 4 589999999999999 99 99 9999998632 11113333 68888887
Q ss_pred C
Q 034227 100 V 100 (100)
Q Consensus 100 v 100 (100)
+
T Consensus 87 v 87 (137)
T 1qxn_A 87 V 87 (137)
T ss_dssp E
T ss_pred E
Confidence 5
No 12
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.24 E-value=4e-12 Score=81.10 Aligned_cols=41 Identities=24% Similarity=0.450 Sum_probs=35.4
Q ss_pred CcceeCHHHHHHHhhCCCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 27 ~~~~i~~~e~~~~~~~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
.++.|+++++.+ +++.+|||||+++||+.|||| ||+|+|+.
T Consensus 3 ~~~~i~~~el~~--~~~~~iiDvR~~~e~~~ghIp--gA~nip~~ 43 (134)
T 3g5j_A 3 AMSVIKIEKALK--LDKVIFVDVRTEGEYEEDHIL--NAINMPLF 43 (134)
T ss_dssp --CEECHHHHTT--CTTEEEEECSCHHHHHHCCCT--TCEECCSS
T ss_pred CccccCHHHHHh--cCCcEEEEcCCHHHHhcCCCC--CCEEcCcc
Confidence 467899999876 467899999999999999999 99999985
No 13
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.21 E-value=1e-11 Score=77.45 Aligned_cols=53 Identities=25% Similarity=0.468 Sum_probs=37.4
Q ss_pred HHHHHhh---CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 35 AAKNLLE---SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 35 e~~~~~~---~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
|++++++ ++.+|||||+++||+.|||| ||+|+|+. ++.+.+...++++++||+
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIp--gAi~ip~~-----------~l~~~~~~~l~~~~~ivv 57 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIM--GAMAMPIE-----------DLVDRASSSLEKSRDIYV 57 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEET--TCEECCGG-----------GHHHHHHHHSCTTSCEEE
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCC--CCEeCCHH-----------HHHHHHHhcCCCCCeEEE
Confidence 5666665 25899999999999999999 99999986 455555444788888874
No 14
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.20 E-value=3.1e-11 Score=79.16 Aligned_cols=69 Identities=19% Similarity=0.289 Sum_probs=49.5
Q ss_pred CcceeCHHHHHHHhh--CCCeEEecCChhhHhc-cCC------CCCCeeeeccccCCCCCCCCCHHHHHHHHhhc-----
Q 034227 27 EVITVDVRAAKNLLE--SGYGYLDVRTAEEFKE-GHV------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC----- 92 (100)
Q Consensus 27 ~~~~i~~~e~~~~~~--~~~~lIDvR~~~e~~~-ghI------p~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~----- 92 (100)
-++.|+++++.++++ ++.+|||||+++||+. ||| | ||+|+|+.. .++.. .++|.+++.+.+
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~p--gAv~ip~~~--~~~~~-~~~~~~~l~~~l~~~~~ 77 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGR--EVVYVEWAT--SDGTH-NDNFLAELRDRIPADAD 77 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTC--CCEECCSBC--TTSCB-CTTHHHHHHHHCC----
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCC--CcEEeeeec--ccccc-CHHHHHHHHHHHhhccC
Confidence 356899999999887 4789999999999997 999 9 999999875 22221 234555554433
Q ss_pred CCCCceeC
Q 034227 93 KEEDRLVV 100 (100)
Q Consensus 93 ~~~~~viv 100 (100)
+++++||+
T Consensus 78 ~~~~~ivv 85 (148)
T 2fsx_A 78 QHERPVIF 85 (148)
T ss_dssp ---CCEEE
T ss_pred CCCCEEEE
Confidence 78888875
No 15
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.20 E-value=3.5e-12 Score=84.53 Aligned_cols=65 Identities=18% Similarity=0.212 Sum_probs=50.0
Q ss_pred CCcceeCHHHHHHHhh-CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 26 AEVITVDVRAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 26 ~~~~~i~~~e~~~~~~-~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
..++.|+++++.++++ ++.+|||||+++||+.|||| ||+|+|+..+. +...++...++++++||+
T Consensus 25 ~~~~~Is~~el~~~l~~~~~~lIDvR~~~ey~~ghIp--gAinip~~~l~--------~~~~~l~~~~~~~~~iVv 90 (152)
T 1t3k_A 25 RSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIA--GSLHYASGSFD--------DKISHLVQNVKDKDTLVF 90 (152)
T ss_dssp SSSEEECTTTTTTCCCCTTEEEEEESCSHHHHSSCCC--SSEEECCSSSS--------TTHHHHHHTCCSCCEEEE
T ss_pred CCCceECHHHHHHHhcCCCEEEEECCChhhccCccCC--CCEECCHHHHH--------HHHHHHHHhcCCCCEEEE
Confidence 4678999999998886 46899999999999999999 99999986432 122333322577888774
No 16
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.19 E-value=2.4e-11 Score=78.51 Aligned_cols=45 Identities=18% Similarity=0.256 Sum_probs=40.3
Q ss_pred CCCcceeCHHHHHHHhh--C-CCeEEecCChhhHhc-cCCCCCCeeeeccc
Q 034227 25 GAEVITVDVRAAKNLLE--S-GYGYLDVRTAEEFKE-GHVDAAKIFNIPYM 71 (100)
Q Consensus 25 ~~~~~~i~~~e~~~~~~--~-~~~lIDvR~~~e~~~-ghIp~~gA~~ip~~ 71 (100)
...+..|+++++.++++ + +.+|||||++.||+. |||| ||+|+|+.
T Consensus 18 ~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIp--gA~~ip~~ 66 (139)
T 2hhg_A 18 NSSIETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIP--GSFSCTRG 66 (139)
T ss_dssp HTTSEEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCT--TCEECCGG
T ss_pred HHhcCccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCC--CeEECChH
Confidence 45678999999999987 3 578999999999999 9999 99999986
No 17
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.18 E-value=4.1e-11 Score=84.94 Aligned_cols=70 Identities=16% Similarity=0.163 Sum_probs=55.6
Q ss_pred ceeCHHHHHHHhh-CCCeEEecCChhhHhccCCCCCCeeeeccccCCC-----CCCCCCH-HHHHHHHhh-cCCCCceeC
Q 034227 29 ITVDVRAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTP-----EGRVKNP-DFLKKVRSL-CKEEDRLVV 100 (100)
Q Consensus 29 ~~i~~~e~~~~~~-~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~-----~g~~~~~-~~~~~~~~~-~~~~~~viv 100 (100)
+.|+++++.++++ ++.+|||||+++||+.|||| ||+|+|+..+.. .+.++.+ .|.+.+.++ ++++++|||
T Consensus 9 ~~is~~~l~~~l~~~~~~iiDvR~~~ey~~ghIp--gA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvv 86 (271)
T 1e0c_A 9 LVIEPADLQARLSAPELILVDLTSAARYAEGHIP--GARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVV 86 (271)
T ss_dssp SEECHHHHHTTTTCTTEEEEECSCHHHHHHCBST--TCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTCCTTCEEEE
T ss_pred ceeeHHHHHHhccCCCeEEEEcCCcchhhhCcCC--CCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 5899999999886 57899999999999999999 999999876422 2455554 566666665 688888875
No 18
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.17 E-value=8e-12 Score=78.41 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=43.7
Q ss_pred CcceeCHHHHHHHhhCCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhh-cCCCCceeC
Q 034227 27 EVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVV 100 (100)
Q Consensus 27 ~~~~i~~~e~~~~~~~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~-~~~~~~viv 100 (100)
....|+++++. +++.+|||||+++||+.|||| ||+|+|+. ++.+.+... ++++++||+
T Consensus 3 ~~~~is~~el~---~~~~~liDvR~~~e~~~ghIp--gAi~ip~~-----------~l~~~~~~~~~~~~~~ivv 61 (110)
T 2k0z_A 3 EDYAISLEEVN---FNDFIVVDVRELDEYEELHLP--NATLISVN-----------DQEKLADFLSQHKDKKVLL 61 (110)
T ss_dssp TTTEEETTTCC---GGGSEEEEEECHHHHHHSBCT--TEEEEETT-----------CHHHHHHHHHSCSSSCEEE
T ss_pred ceeeeCHHHhc---cCCeEEEECCCHHHHhcCcCC--CCEEcCHH-----------HHHHHHHhcccCCCCEEEE
Confidence 34567777762 356899999999999999999 99999986 333344322 678888874
No 19
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.16 E-value=8.7e-11 Score=85.18 Aligned_cols=69 Identities=25% Similarity=0.362 Sum_probs=55.1
Q ss_pred eeCHHHHHHHhh-CCCeEEecCChhhH-----------hccCCCCCCeeeeccccC-CCCCCCCCHHHH-HHHHhh-cCC
Q 034227 30 TVDVRAAKNLLE-SGYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFN-TPEGRVKNPDFL-KKVRSL-CKE 94 (100)
Q Consensus 30 ~i~~~e~~~~~~-~~~~lIDvR~~~e~-----------~~ghIp~~gA~~ip~~~~-~~~g~~~~~~~~-~~~~~~-~~~ 94 (100)
.++++++.+.++ ++.+|||||+++|| +.|||| ||+|+|+..+ +.+|.+++++.+ +.+.+. +++
T Consensus 176 ~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIp--GAiniP~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 253 (302)
T 3olh_A 176 IKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIP--GTVNIPFTDFLSQEGLEKSPEEIRHLFQEKKVDL 253 (302)
T ss_dssp EECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCT--TCEECCGGGGBCSSSCBCCHHHHHHHHHHTTCCT
T ss_pred eecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCC--CceecCHHHhcCCCCccCCHHHHHHHHHhcCCCC
Confidence 588999999887 67899999999999 789999 9999999865 556777776544 444433 688
Q ss_pred CCceeC
Q 034227 95 EDRLVV 100 (100)
Q Consensus 95 ~~~viv 100 (100)
+++||+
T Consensus 254 ~~~iv~ 259 (302)
T 3olh_A 254 SKPLVA 259 (302)
T ss_dssp TSCEEE
T ss_pred CCCEEE
Confidence 899874
No 20
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.16 E-value=1.2e-11 Score=78.42 Aligned_cols=42 Identities=29% Similarity=0.275 Sum_probs=37.6
Q ss_pred ceeCHHHHHHHhh-C-CCeEEecCChhhHhccCCCCCCeeeecccc
Q 034227 29 ITVDVRAAKNLLE-S-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMF 72 (100)
Q Consensus 29 ~~i~~~e~~~~~~-~-~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~ 72 (100)
+.|+++|+.++++ + +.+|||||+++||+.|||| ||+|+|+..
T Consensus 1 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIp--gA~~ip~~~ 44 (127)
T 3i2v_A 1 SRVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLP--HALHIPLKH 44 (127)
T ss_dssp CEECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCT--TSEECCHHH
T ss_pred CCCCHHHHHHHHhCCCCeEEEECCCHHHhhheecC--CceeCChHH
Confidence 3689999999987 3 5899999999999999999 999999864
No 21
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.16 E-value=8.3e-11 Score=83.78 Aligned_cols=70 Identities=23% Similarity=0.348 Sum_probs=55.1
Q ss_pred ceeCHHHHHHHhh-CCCeEEecCChhhH-----------hccCCCCCCeeeeccccCCCCCCCCCHHHHHHH-Hhh-cCC
Q 034227 29 ITVDVRAAKNLLE-SGYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKV-RSL-CKE 94 (100)
Q Consensus 29 ~~i~~~e~~~~~~-~~~~lIDvR~~~e~-----------~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~-~~~-~~~ 94 (100)
..|+++++.++++ ++.+|||||+++|| +.|||| ||+|+|+..+..+|.+.+.+.++++ .+. +++
T Consensus 152 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIp--gA~nip~~~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (280)
T 1urh_A 152 AVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIP--GALNVPWTELVREGELKTTDELDAIFFGRGVSY 229 (280)
T ss_dssp GBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCT--TCEECCGGGGBSSSSBCCHHHHHHHHHTTTCCS
T ss_pred cEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCC--CceEeeHHHhhcCCccCCHHHHHHHHHHcCCCC
Confidence 3499999999887 57899999999999 689999 9999999876446777776544433 332 578
Q ss_pred CCceeC
Q 034227 95 EDRLVV 100 (100)
Q Consensus 95 ~~~viv 100 (100)
+++||+
T Consensus 230 ~~~ivv 235 (280)
T 1urh_A 230 DKPIIV 235 (280)
T ss_dssp SSCEEE
T ss_pred CCCEEE
Confidence 899875
No 22
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.15 E-value=2.7e-11 Score=79.40 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=51.3
Q ss_pred CCcceeCHHHHHHHhh-C--CCeEEecCChhhHhccCCCCCCeeeeccccC-------C--C-CCCCCCHHHHHHHHhhc
Q 034227 26 AEVITVDVRAAKNLLE-S--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFN-------T--P-EGRVKNPDFLKKVRSLC 92 (100)
Q Consensus 26 ~~~~~i~~~e~~~~~~-~--~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~-------~--~-~g~~~~~~~~~~~~~~~ 92 (100)
.....|+++++.++++ + +.+|||||++.||+.|||| ||+|+|+..+ + + .+.++.++..+.+.. +
T Consensus 13 ~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIp--gAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~ 89 (154)
T 1hzm_A 13 EMAISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIE--SAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDRFTR-R 89 (154)
T ss_dssp CCSSBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSS--SCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHHHHH-S
T ss_pred ccccccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhcccc--CceEeCccHHHHhhhhcCcccHHHhCCCHHHHHHHhc-c
Confidence 3567899999999887 4 6899999999999999999 9999998631 1 0 123333333333333 5
Q ss_pred CCCCceeC
Q 034227 93 KEEDRLVV 100 (100)
Q Consensus 93 ~~~~~viv 100 (100)
+++++||+
T Consensus 90 ~~~~~iVv 97 (154)
T 1hzm_A 90 CGTDTVVL 97 (154)
T ss_dssp TTSSCEEE
T ss_pred CCCCeEEE
Confidence 67778764
No 23
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.15 E-value=8.8e-12 Score=81.88 Aligned_cols=43 Identities=28% Similarity=0.327 Sum_probs=38.2
Q ss_pred ceeCHHHHHHHhhC---CCeEEecCChhhHhccCCCCCCeeeeccccC
Q 034227 29 ITVDVRAAKNLLES---GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFN 73 (100)
Q Consensus 29 ~~i~~~e~~~~~~~---~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~ 73 (100)
..|+++++.+++++ +.+|||||+++||+.|||| ||+|+|+..+
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIp--gAinip~~~l 61 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIP--TAISIPGNKI 61 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCT--TCEECCGGGC
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCC--CCEECCHHHH
Confidence 56899999999873 5799999999999999999 9999998743
No 24
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.14 E-value=9.1e-11 Score=84.45 Aligned_cols=70 Identities=21% Similarity=0.374 Sum_probs=55.7
Q ss_pred ceeCHHHHHHHhh-CCCeEEecCChhhH------------hccCCCCCCeeeeccccC-CCCCCCCCHHHHHH-HHhh-c
Q 034227 29 ITVDVRAAKNLLE-SGYGYLDVRTAEEF------------KEGHVDAAKIFNIPYMFN-TPEGRVKNPDFLKK-VRSL-C 92 (100)
Q Consensus 29 ~~i~~~e~~~~~~-~~~~lIDvR~~~e~------------~~ghIp~~gA~~ip~~~~-~~~g~~~~~~~~~~-~~~~-~ 92 (100)
..++++++.++++ ++.+|||||+++|| +.|||| ||+|+|+..+ +++|.+.+.+.++. +... +
T Consensus 160 ~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIp--gA~nip~~~l~~~~~~~~~~~~l~~~~~~~~~ 237 (296)
T 1rhs_A 160 LLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIR--GSVNMPFMNFLTEDGFEKSPEELRAMFEAKKV 237 (296)
T ss_dssp GEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEET--TCEECCGGGGBCTTSCBCCHHHHHHHHHHTTC
T ss_pred eEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCC--CCEeecHHHhcCCCCcCCCHHHHHHHHHHcCC
Confidence 5789999999887 67899999999999 789999 9999999865 45677777654433 3432 6
Q ss_pred CCCCceeC
Q 034227 93 KEEDRLVV 100 (100)
Q Consensus 93 ~~~~~viv 100 (100)
+++++||+
T Consensus 238 ~~~~~ivv 245 (296)
T 1rhs_A 238 DLTKPLIA 245 (296)
T ss_dssp CTTSCEEE
T ss_pred CCCCCEEE
Confidence 78899875
No 25
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.14 E-value=4.4e-11 Score=79.15 Aligned_cols=46 Identities=15% Similarity=0.308 Sum_probs=40.7
Q ss_pred cCCCcceeCHHHHHHHhhC-------CCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 24 SGAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 24 ~~~~~~~i~~~e~~~~~~~-------~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
....++.|+++++.++++. +.+|||||++.||+.|||| ||+|+|+.
T Consensus 18 ~~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIp--gAinip~~ 70 (161)
T 1c25_A 18 KHQDLKYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIK--GAVNLHME 70 (161)
T ss_dssp SCTTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEET--TCEECCSH
T ss_pred CCCCcceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCccc--CcEeCChh
Confidence 3456789999999999873 5789999999999999999 99999985
No 26
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.13 E-value=5.9e-11 Score=77.85 Aligned_cols=41 Identities=22% Similarity=0.244 Sum_probs=37.3
Q ss_pred ceeCHHHHHHHhh---CCCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 29 ITVDVRAAKNLLE---SGYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 29 ~~i~~~e~~~~~~---~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
+.|+++++.++++ ++.+|||||++.||+.|||| ||+|+|+.
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIp--gAinip~~ 47 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHIL--EAININCS 47 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEET--TCEECCCC
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccC--CCeeeChH
Confidence 6799999999986 35789999999999999999 99999986
No 27
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.13 E-value=5.7e-11 Score=79.69 Aligned_cols=46 Identities=20% Similarity=0.372 Sum_probs=40.5
Q ss_pred cCCCcceeCHHHHHHHhhC-------CCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 24 SGAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 24 ~~~~~~~i~~~e~~~~~~~-------~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
....++.|+++++.+++++ +.+|||||++.||+.|||| ||+|+|+.
T Consensus 19 ~~~~~~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIp--gAinip~~ 71 (175)
T 2a2k_A 19 KHQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIK--TAVNLPLE 71 (175)
T ss_dssp SSTTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEET--TCEECCSH
T ss_pred cCCCCceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCC--CcEECChh
Confidence 3456789999999999873 5789999999999999999 99999985
No 28
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.13 E-value=9.7e-11 Score=85.53 Aligned_cols=68 Identities=24% Similarity=0.417 Sum_probs=54.7
Q ss_pred eeCHHHHHHHhhCCCeEEecCChhhHhc----------------cCCCCCCeeeecccc-CCCCCCCCCHHHHHHHHhhc
Q 034227 30 TVDVRAAKNLLESGYGYLDVRTAEEFKE----------------GHVDAAKIFNIPYMF-NTPEGRVKNPDFLKKVRSLC 92 (100)
Q Consensus 30 ~i~~~e~~~~~~~~~~lIDvR~~~e~~~----------------ghIp~~gA~~ip~~~-~~~~g~~~~~~~~~~~~~~~ 92 (100)
.++++|+.+.++++ +|||||+++||+. |||| ||+|+|+.. ++++|.+.+++.+++....+
T Consensus 180 ~i~~~el~~~l~~~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIp--GA~niP~~~~~~~~g~~~~~~~l~~~~~~l 256 (318)
T 3hzu_A 180 RAFRDDVLAILGAQ-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIP--TAVHIPWGKAADESGRFRSREELERLYDFI 256 (318)
T ss_dssp BCCHHHHHHHTTTS-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCT--TCEECCGGGGBCTTSCBCCHHHHHHHTTTC
T ss_pred cccHHHHHHhhcCC-eEEecCCHHHhcccccCccccccccCCcCcCCC--CeeecCHHHhcCCCCcCCCHHHHHHHhcCC
Confidence 46899999988765 9999999999998 9999 999999975 47788888865444443337
Q ss_pred CCCCceeC
Q 034227 93 KEEDRLVV 100 (100)
Q Consensus 93 ~~~~~viv 100 (100)
+++++||+
T Consensus 257 ~~~~~ivv 264 (318)
T 3hzu_A 257 NPDDQTVV 264 (318)
T ss_dssp CTTCCCEE
T ss_pred CCCCcEEE
Confidence 88899875
No 29
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.11 E-value=1e-10 Score=77.23 Aligned_cols=43 Identities=16% Similarity=0.291 Sum_probs=38.4
Q ss_pred CCcceeCHHHHHHHhhC-----CCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 26 AEVITVDVRAAKNLLES-----GYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 26 ~~~~~i~~~e~~~~~~~-----~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
..++.|+++++.+++++ +.+|||||++ ||+.|||| ||+|+|+.
T Consensus 2 ~~~~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIp--GAinip~~ 49 (152)
T 2j6p_A 2 TNYTYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIV--NSINMPTI 49 (152)
T ss_dssp -CCEEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCT--TCEECCTT
T ss_pred CCcCccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCC--CcEECChh
Confidence 45788999999998874 6899999999 99999999 99999986
No 30
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.09 E-value=4e-11 Score=71.74 Aligned_cols=45 Identities=24% Similarity=0.501 Sum_probs=36.3
Q ss_pred CCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhh-cCCCCceeC
Q 034227 43 GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL-CKEEDRLVV 100 (100)
Q Consensus 43 ~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~-~~~~~~viv 100 (100)
+.++||||+++||+.|||| ||+|+|+. ++.+.+.++ .+++++||+
T Consensus 1 ~~~liDvR~~~e~~~ghIp--gA~~ip~~-----------~l~~~~~~l~~~~~~~ivv 46 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQ--GAINIPLK-----------EVKERIATAVPDKNDTVKV 46 (85)
T ss_dssp CEEEEECSCHHHHTTEEET--TCEECCHH-----------HHHHHHHHHCCCTTSEEEE
T ss_pred CCEEEECCCHHHHHhCCCC--CCEEcCHH-----------HHHHHHHHhCCCCCCcEEE
Confidence 3579999999999999999 99999985 555555553 378888874
No 31
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.08 E-value=2.9e-10 Score=81.05 Aligned_cols=69 Identities=23% Similarity=0.412 Sum_probs=54.1
Q ss_pred eeCHHHHHHHhh----CCCeEEecCChhhHh----------------ccCCCCCCeeeeccccC-CCCCCCCCHHHHHH-
Q 034227 30 TVDVRAAKNLLE----SGYGYLDVRTAEEFK----------------EGHVDAAKIFNIPYMFN-TPEGRVKNPDFLKK- 87 (100)
Q Consensus 30 ~i~~~e~~~~~~----~~~~lIDvR~~~e~~----------------~ghIp~~gA~~ip~~~~-~~~g~~~~~~~~~~- 87 (100)
.|+++++.++++ ++..|||||+++||. .|||| ||+|+|+..+ +++|.+++++.+++
T Consensus 147 ~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIp--gA~~ip~~~~~~~~~~~~~~~~l~~~ 224 (285)
T 1uar_A 147 RAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIP--GAKNIPWAKAVNPDGTFKSAEELRAL 224 (285)
T ss_dssp EECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCT--TCEECCGGGGBCTTSCBCCHHHHHHH
T ss_pred EEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCC--CccccCHHHhcCCCCcCCCHHHHHHH
Confidence 499999999884 445799999999998 89999 9999999765 55677777654444
Q ss_pred HHhh-cCCCCceeC
Q 034227 88 VRSL-CKEEDRLVV 100 (100)
Q Consensus 88 ~~~~-~~~~~~viv 100 (100)
+.+. ++++++||+
T Consensus 225 ~~~~g~~~~~~ivv 238 (285)
T 1uar_A 225 YEPLGITKDKDIVV 238 (285)
T ss_dssp HGGGTCCTTSEEEE
T ss_pred HHHcCCCCCCCEEE
Confidence 4433 688898875
No 32
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.06 E-value=1.2e-10 Score=77.37 Aligned_cols=47 Identities=6% Similarity=0.157 Sum_probs=40.0
Q ss_pred CCCcceeCHHHHHHHhh-C--CCeEEecCChhhHhccCCCCCCeeeeccccC
Q 034227 25 GAEVITVDVRAAKNLLE-S--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFN 73 (100)
Q Consensus 25 ~~~~~~i~~~e~~~~~~-~--~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~ 73 (100)
....+.|+++++.++++ + +.+|||||+++||+.|||| ||+|||+..+
T Consensus 16 ~~~~~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~--gAinip~~~l 65 (157)
T 2gwf_A 16 PRGSGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCIL--HSLSVPEEAI 65 (157)
T ss_dssp ---CCEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBT--TCEECCGGGC
T ss_pred cCCCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCcc--CCcccCHHHc
Confidence 45678899999999887 4 6799999999999999999 9999998754
No 33
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.05 E-value=1.8e-10 Score=76.37 Aligned_cols=47 Identities=9% Similarity=0.188 Sum_probs=41.6
Q ss_pred CCCcceeCHHHHHHHhh-C--CCeEEecCChhhHhccCCCCCCeeeeccccC
Q 034227 25 GAEVITVDVRAAKNLLE-S--GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFN 73 (100)
Q Consensus 25 ~~~~~~i~~~e~~~~~~-~--~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~ 73 (100)
......|+++++.++++ + +.+|||||+++||+.|||| ||+|||+..+
T Consensus 11 ~~~~~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~--gainip~~~~ 60 (157)
T 1whb_A 11 TKEKGAITAKELYTMMTDKNISLIIMDARRMQDYQDSCIL--HSLSVPEEAI 60 (157)
T ss_dssp CCCCSEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBT--TCEEECSSSC
T ss_pred cccCCccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcccc--CCcccCHHHc
Confidence 45678999999999887 4 6799999999999999999 9999998654
No 34
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.05 E-value=2e-10 Score=79.59 Aligned_cols=45 Identities=20% Similarity=0.380 Sum_probs=40.2
Q ss_pred CCCcceeCHHHHHHHhhC-------CCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 25 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 25 ~~~~~~i~~~e~~~~~~~-------~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
...++.|+++++.++++. +.+|||||++.||+.|||| ||+|+|+.
T Consensus 40 ~~~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIp--GAinip~~ 91 (211)
T 1qb0_A 40 HQDLKYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIK--TAVNLPLE 91 (211)
T ss_dssp STTSCEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEET--TCEECCSH
T ss_pred cCCCCeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCC--CCEECCch
Confidence 456789999999998874 5789999999999999999 99999985
No 35
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.03 E-value=1.7e-10 Score=74.52 Aligned_cols=66 Identities=24% Similarity=0.344 Sum_probs=49.2
Q ss_pred CcceeCHHHHHHHhh-C-CCeEEecCChhhHhc-cCC------CCCCeeeeccccCCCCCCCCCHHHHHHHHhhc--CCC
Q 034227 27 EVITVDVRAAKNLLE-S-GYGYLDVRTAEEFKE-GHV------DAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC--KEE 95 (100)
Q Consensus 27 ~~~~i~~~e~~~~~~-~-~~~lIDvR~~~e~~~-ghI------p~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~--~~~ 95 (100)
....|+++++.++++ . +.+|||||+++||+. +|+ | ||+|||+... ..++|.+++.+.+ +++
T Consensus 3 ~~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~--ga~~ip~~~~------~~~~~~~~l~~~~~~~~~ 74 (134)
T 1vee_A 3 SGSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGK--KAVSTVYNGE------DKPGFLKKLSLKFKDPEN 74 (134)
T ss_dssp CSCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSC--CCEECCCCGG------GHHHHHHHHHTTCSCGGG
T ss_pred CCCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCC--ceEEeecccc------cChhHHHHHHHHhCCCCC
Confidence 457899999999886 3 689999999999986 444 7 8999998531 1235666665543 678
Q ss_pred CceeC
Q 034227 96 DRLVV 100 (100)
Q Consensus 96 ~~viv 100 (100)
++||+
T Consensus 75 ~~ivv 79 (134)
T 1vee_A 75 TTLYI 79 (134)
T ss_dssp CEEEE
T ss_pred CEEEE
Confidence 88875
No 36
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.03 E-value=1.5e-10 Score=89.68 Aligned_cols=63 Identities=22% Similarity=0.360 Sum_probs=51.6
Q ss_pred cCCCcceeCHHHHHHHhhCCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 24 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 24 ~~~~~~~i~~~e~~~~~~~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
....++.|+++++.++++++.++||||+++||+.|||| ||+|+|+. ++.+.+.. ++++++||+
T Consensus 484 ~~~~~~~i~~~~~~~~~~~~~~~iDvR~~~e~~~ghi~--ga~~ip~~-----------~l~~~~~~-l~~~~~iv~ 546 (588)
T 3ics_A 484 VDGFVDTVQWHEIDRIVENGGYLIDVREPNELKQGMIK--GSINIPLD-----------ELRDRLEE-VPVDKDIYI 546 (588)
T ss_dssp HTTSCCEECTTTHHHHHHTTCEEEECSCGGGGGGCBCT--TEEECCHH-----------HHTTCGGG-SCSSSCEEE
T ss_pred cccccceecHHHHHHHhcCCCEEEEcCCHHHHhcCCCC--CCEECCHH-----------HHHHHHhh-CCCCCeEEE
Confidence 45678999999999999888999999999999999999 99999985 33333333 678888764
No 37
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.02 E-value=3.4e-10 Score=81.54 Aligned_cols=65 Identities=14% Similarity=0.155 Sum_probs=50.7
Q ss_pred CCcceeCHHHHHHHhh-CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhh--cCCCCceeC
Q 034227 26 AEVITVDVRAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSL--CKEEDRLVV 100 (100)
Q Consensus 26 ~~~~~i~~~e~~~~~~-~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~--~~~~~~viv 100 (100)
...+.|+++++.++++ ++.+|||||++.||+.|||| ||+|+|+..+ .++...+.+. .+++++||+
T Consensus 119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey~~GHIp--GAiniP~~~~--------~~~~~~l~~~l~~~kdk~IVv 186 (265)
T 4f67_A 119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEYELGTFK--NAINPDIENF--------REFPDYVQRNLIDKKDKKIAM 186 (265)
T ss_dssp CTTCEECHHHHHHHTTCTTSEEEECSCHHHHHHEEET--TCBCCCCSSG--------GGHHHHHHHHTGGGTTSCEEE
T ss_pred CCCceECHHHHHHHhcCCCeEEEEeCCchHhhcCcCC--CCEeCCHHHH--------HhhHHHHHHhhhhCCCCeEEE
Confidence 3468899999999998 57999999999999999999 9999998632 2344444322 367888874
No 38
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.02 E-value=3.4e-10 Score=80.58 Aligned_cols=70 Identities=19% Similarity=0.284 Sum_probs=54.9
Q ss_pred ceeCHHHHHHHhh-CCCeEEecC----------ChhhHhccCCCCCCeeeeccccCC-CC----CCCCCH-HHHHHHHhh
Q 034227 29 ITVDVRAAKNLLE-SGYGYLDVR----------TAEEFKEGHVDAAKIFNIPYMFNT-PE----GRVKNP-DFLKKVRSL 91 (100)
Q Consensus 29 ~~i~~~e~~~~~~-~~~~lIDvR----------~~~e~~~ghIp~~gA~~ip~~~~~-~~----g~~~~~-~~~~~~~~~ 91 (100)
..|+++++.++++ ++.+|||+| +++||+.|||| ||+|+|+..+. .+ +.+++. +|.+.+.++
T Consensus 4 ~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIp--gAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
T 1urh_A 4 WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIP--GAVFFDIEALSDHTSPLPHMLPRPETFAVAMREL 81 (280)
T ss_dssp CEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCT--TCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHT
T ss_pred ceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCC--CCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence 5799999999887 578999999 78999999999 99999987542 22 345543 566666665
Q ss_pred -cCCCCceeC
Q 034227 92 -CKEEDRLVV 100 (100)
Q Consensus 92 -~~~~~~viv 100 (100)
++++++|||
T Consensus 82 gi~~~~~ivv 91 (280)
T 1urh_A 82 GVNQDKHLIV 91 (280)
T ss_dssp TCCTTSEEEE
T ss_pred CCCCCCeEEE
Confidence 688888875
No 39
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.01 E-value=2.3e-10 Score=81.03 Aligned_cols=70 Identities=17% Similarity=0.286 Sum_probs=53.0
Q ss_pred ceeCHHHHHHHhh-CCCeEEecCChhhHh--------ccCCCCCCeeeeccccC-CCCCC-CCCHHHHHHHHhh-cCCCC
Q 034227 29 ITVDVRAAKNLLE-SGYGYLDVRTAEEFK--------EGHVDAAKIFNIPYMFN-TPEGR-VKNPDFLKKVRSL-CKEED 96 (100)
Q Consensus 29 ~~i~~~e~~~~~~-~~~~lIDvR~~~e~~--------~ghIp~~gA~~ip~~~~-~~~g~-~~~~~~~~~~~~~-~~~~~ 96 (100)
..|+++++.+.++ ++.+|||||+++||+ .|||| ||+|+|+..+ +.++. ....++.+.+.+. +++++
T Consensus 147 ~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~~~~ghIp--gA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 224 (271)
T 1e0c_A 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAAKGGHIP--GAVNFEWTAAMDPSRALRIRTDIAGRLEELGITPDK 224 (271)
T ss_dssp TBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCSSSCSBCT--TCEECCGGGGEEGGGTTEECTTHHHHHHHTTCCTTS
T ss_pred ccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCCCcCCcCC--CceeccHHHhCCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 4579999999887 468999999999999 99999 9999999765 33332 2234565555543 68889
Q ss_pred ceeC
Q 034227 97 RLVV 100 (100)
Q Consensus 97 ~viv 100 (100)
+||+
T Consensus 225 ~ivv 228 (271)
T 1e0c_A 225 EIVT 228 (271)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 8875
No 40
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.01 E-value=3.6e-10 Score=80.27 Aligned_cols=70 Identities=14% Similarity=0.309 Sum_probs=53.8
Q ss_pred ceeCHHHHHHHhh-CCCeEEecCC-hhhHhccCCCCCCeeeeccccC--CC-CCCCCCH-HHHHHHHhh-cCCCCceeC
Q 034227 29 ITVDVRAAKNLLE-SGYGYLDVRT-AEEFKEGHVDAAKIFNIPYMFN--TP-EGRVKNP-DFLKKVRSL-CKEEDRLVV 100 (100)
Q Consensus 29 ~~i~~~e~~~~~~-~~~~lIDvR~-~~e~~~ghIp~~gA~~ip~~~~--~~-~g~~~~~-~~~~~~~~~-~~~~~~viv 100 (100)
..|+++++.++++ ++.+|||||+ ++||+.|||| ||+|+|+... ++ .+.++++ +|.+.+.++ ++++++|||
T Consensus 6 ~~is~~~l~~~l~~~~~~liDvR~~~~ey~~ghIp--gA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~vvv 82 (277)
T 3aay_A 6 VLVSADWAESNLHAPKVVFVEVDEDTSAYDRDHIA--GAIKLDWRTDLQDPVKRDFVDAQQFSKLLSERGIANEDTVIL 82 (277)
T ss_dssp HEECHHHHHTTTTCTTEEEEEEESSSHHHHHCBST--TCEEEETTTTTBCSSSSSBCCHHHHHHHHHHHTCCTTSEEEE
T ss_pred ceEcHHHHHHHhCCCCEEEEEcCCChhhHhhCCCC--CcEEecccccccCCCCCCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 5799999999887 4688999998 9999999999 9999998642 11 3445544 566666654 688888875
No 41
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.00 E-value=2.2e-10 Score=73.44 Aligned_cols=41 Identities=17% Similarity=0.219 Sum_probs=33.4
Q ss_pred ceeCHHHHHH--------Hhh-CCCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 29 ITVDVRAAKN--------LLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 29 ~~i~~~e~~~--------~~~-~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
+.|+++++.+ .++ ++.+|||||+++||+.|||| ||+|+|+.
T Consensus 1 k~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~~~ghIp--gA~~ip~~ 50 (142)
T 2ouc_A 1 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQ--GAVHINCA 50 (142)
T ss_dssp CEECHHHHHHHHHC----------CEEEECSCHHHHHHEEET--TCEECCCS
T ss_pred CccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHhhhhhcc--CccccCcc
Confidence 4689999998 555 46899999999999999999 99999986
No 42
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=98.98 E-value=9.7e-10 Score=79.04 Aligned_cols=70 Identities=21% Similarity=0.200 Sum_probs=54.0
Q ss_pred ceeCHHHHHHHhhC-----CCeEEecC--------ChhhHhccCCCCCCeeeeccccCCC-----CCCCCCH-HHHHHHH
Q 034227 29 ITVDVRAAKNLLES-----GYGYLDVR--------TAEEFKEGHVDAAKIFNIPYMFNTP-----EGRVKNP-DFLKKVR 89 (100)
Q Consensus 29 ~~i~~~e~~~~~~~-----~~~lIDvR--------~~~e~~~ghIp~~gA~~ip~~~~~~-----~g~~~~~-~~~~~~~ 89 (100)
+.|+++++.++++. +.+||||| +++||+.|||| ||+|+|+..+.. .+.++++ +|.+.+.
T Consensus 8 ~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIp--GAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l~ 85 (296)
T 1rhs_A 8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVP--GASFFDIEECRDKASPYEVMLPSEAGFADYVG 85 (296)
T ss_dssp SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCT--TCEECCTTTSSCTTSSSSSCCCCHHHHHHHHH
T ss_pred ceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCC--CCEEeCHHHhcCCCCCCCCCCCCHHHHHHHHH
Confidence 58999999999874 57899999 68999999999 999999875422 1345554 5666666
Q ss_pred hh-cCCCCceeC
Q 034227 90 SL-CKEEDRLVV 100 (100)
Q Consensus 90 ~~-~~~~~~viv 100 (100)
.+ ++++++|||
T Consensus 86 ~lgi~~~~~vVv 97 (296)
T 1rhs_A 86 SLGISNDTHVVV 97 (296)
T ss_dssp HTTCCTTCEEEE
T ss_pred HcCCCCCCeEEE
Confidence 54 678888875
No 43
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=98.98 E-value=9.9e-10 Score=79.60 Aligned_cols=71 Identities=15% Similarity=0.160 Sum_probs=55.5
Q ss_pred cceeCHHHHHHHhhC-----CCeEEecC---------ChhhHhccCCCCCCeeeeccccC-CC----CCCCCCH-HHHHH
Q 034227 28 VITVDVRAAKNLLES-----GYGYLDVR---------TAEEFKEGHVDAAKIFNIPYMFN-TP----EGRVKNP-DFLKK 87 (100)
Q Consensus 28 ~~~i~~~e~~~~~~~-----~~~lIDvR---------~~~e~~~ghIp~~gA~~ip~~~~-~~----~g~~~~~-~~~~~ 87 (100)
-..|+++++.+++++ +.+||||| +++||+.|||| ||+|+|+..+ +. .+.+++. .|.+.
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIp--GAi~i~~~~~~~~~~~~~~~lp~~~~~~~~ 98 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIP--GAAFFDIDQCSDRTSPYDHMLPGAEHFAEY 98 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCT--TCEECCTTTSSCSSCSSSSCCCCHHHHHHH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCC--CCeEeCHHHhcCcCCCCCCCCCCHHHHHHH
Confidence 367999999999873 68999999 88999999999 9999998754 21 2345554 57777
Q ss_pred HHhh-cCCCCceeC
Q 034227 88 VRSL-CKEEDRLVV 100 (100)
Q Consensus 88 ~~~~-~~~~~~viv 100 (100)
+.++ ++++++|||
T Consensus 99 ~~~lgi~~~~~VVv 112 (302)
T 3olh_A 99 AGRLGVGAATHVVI 112 (302)
T ss_dssp HHHTTCCSSCEEEE
T ss_pred HHHcCCCCCCEEEE
Confidence 7765 588888875
No 44
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=98.97 E-value=9e-11 Score=79.12 Aligned_cols=46 Identities=20% Similarity=0.355 Sum_probs=40.1
Q ss_pred hcCCCcceeCHHHHHHHhh-C-------CCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 23 SSGAEVITVDVRAAKNLLE-S-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 23 ~~~~~~~~i~~~e~~~~~~-~-------~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
.....++.|+++++.++++ + +.+|||||+ .||..|||| ||+|+|+.
T Consensus 25 ~~~~~~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIp--GAiniP~~ 78 (169)
T 3f4a_A 25 YSITNVKYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIK--DGWHYAYS 78 (169)
T ss_dssp -CCCSEEEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEET--TCEECCHH
T ss_pred cccCCCcEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCC--CCEECCHH
Confidence 4556789999999999997 3 378999999 999999999 99999986
No 45
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=98.97 E-value=1.1e-09 Score=77.72 Aligned_cols=67 Identities=18% Similarity=0.327 Sum_probs=52.1
Q ss_pred eCHHHHHHHhhCCCeEEecCChhhHhc----------------cCCCCCCeeeeccccC-CCCCCCCCHH-HHHHHHhh-
Q 034227 31 VDVRAAKNLLESGYGYLDVRTAEEFKE----------------GHVDAAKIFNIPYMFN-TPEGRVKNPD-FLKKVRSL- 91 (100)
Q Consensus 31 i~~~e~~~~~~~~~~lIDvR~~~e~~~----------------ghIp~~gA~~ip~~~~-~~~g~~~~~~-~~~~~~~~- 91 (100)
++++++.++++.+. |||||+++||+. |||| ||+|+|+..+ +++|.+++++ +.+.+.+.
T Consensus 146 ~~~~el~~~~~~~~-liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIp--gA~~ip~~~~~~~~~~~~~~~~l~~~~~~~~ 222 (277)
T 3aay_A 146 AFRDEVLAAINVKN-LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIP--GAINVPWSRAANEDGTFKSDEELAKLYADAG 222 (277)
T ss_dssp ECHHHHHHTTTTSE-EEECSCHHHHHTSCCC-----CCCCSCCSBCT--TCEECCGGGGBCTTSCBCCHHHHHHHHHHHT
T ss_pred cCHHHHHHhcCCCC-EEEeCChHHeeeeecccccccccccccCCcCC--CceecCHHHhcCCCCcCCCHHHHHHHHHHcC
Confidence 78999998887444 999999999985 9999 9999999754 5568877764 44444443
Q ss_pred cCCCCceeC
Q 034227 92 CKEEDRLVV 100 (100)
Q Consensus 92 ~~~~~~viv 100 (100)
++++++||+
T Consensus 223 ~~~~~~iv~ 231 (277)
T 3aay_A 223 LDNSKETIA 231 (277)
T ss_dssp CCTTSCEEE
T ss_pred CCCCCCEEE
Confidence 688899875
No 46
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=98.96 E-value=6.6e-10 Score=81.09 Aligned_cols=71 Identities=13% Similarity=0.144 Sum_probs=55.2
Q ss_pred cceeCHHHHHHHhh-CCCeEEecCChhh-HhccCCCCCCeeeecccc-C-C-CCCCCCCH-HHHHHHHhh-cCCCCceeC
Q 034227 28 VITVDVRAAKNLLE-SGYGYLDVRTAEE-FKEGHVDAAKIFNIPYMF-N-T-PEGRVKNP-DFLKKVRSL-CKEEDRLVV 100 (100)
Q Consensus 28 ~~~i~~~e~~~~~~-~~~~lIDvR~~~e-~~~ghIp~~gA~~ip~~~-~-~-~~g~~~~~-~~~~~~~~~-~~~~~~viv 100 (100)
...|+++++.++++ ++.+|||||++.| |+.|||| ||+|+|+.. + + ..+.++++ +|.+.+.++ ++++++|||
T Consensus 39 ~~~is~~~l~~~l~~~~~~iiDvR~~~e~y~~gHIp--GAi~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi~~~~~vVv 116 (318)
T 3hzu_A 39 ERLVTADWLSAHMGAPGLAIVESDEDVLLYDVGHIP--GAVKIDWHTDLNDPRVRDYINGEQFAELMDRKGIARDDTVVI 116 (318)
T ss_dssp GGEECHHHHHHHTTCTTEEEEECCSSTTSGGGCBCT--TEEECCHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceecHHHHHHhccCCCEEEEECCCChhHHhcCcCC--CCeEeCchhhhccCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 35699999999997 5789999999887 9999999 999999742 2 2 23455554 666666665 788999875
No 47
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=98.94 E-value=6.4e-10 Score=79.23 Aligned_cols=71 Identities=18% Similarity=0.246 Sum_probs=54.7
Q ss_pred cceeCHHHHHHHhh-CCCeEEecC-ChhhHhccCCCCCCeeeecccc-C-CC-CCCCCCH-HHHHHHHhh-cCCCCceeC
Q 034227 28 VITVDVRAAKNLLE-SGYGYLDVR-TAEEFKEGHVDAAKIFNIPYMF-N-TP-EGRVKNP-DFLKKVRSL-CKEEDRLVV 100 (100)
Q Consensus 28 ~~~i~~~e~~~~~~-~~~~lIDvR-~~~e~~~ghIp~~gA~~ip~~~-~-~~-~g~~~~~-~~~~~~~~~-~~~~~~viv 100 (100)
...|+++++.++++ ++.+||||| +++||+.|||| ||+|+|+.. + ++ .+.++++ +|.+.+.++ ++++++||+
T Consensus 7 ~~~is~~~l~~~l~~~~~~liDvR~~~~e~~~ghIp--gA~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~ivv 84 (285)
T 1uar_A 7 EVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIP--GAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVL 84 (285)
T ss_dssp GGEECHHHHHTTTTCTTEEEEEECSSTTHHHHCBCT--TCEEECHHHHHBCSSSSSBCCHHHHHHHHHHTTCCTTCEEEE
T ss_pred CceEcHHHHHHhcCCCCEEEEEcCCCcchhhcCcCC--CCEECCchhhccCCcccCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 36799999999887 478999999 79999999999 999999863 2 22 3455554 566666664 688899875
No 48
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=98.93 E-value=8.6e-10 Score=73.00 Aligned_cols=49 Identities=16% Similarity=0.165 Sum_probs=37.5
Q ss_pred hhcCCCcceeCHHHHHHHhh--------C-CCeEEecCChhhHhccCCCCCCeeeecccc
Q 034227 22 RSSGAEVITVDVRAAKNLLE--------S-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMF 72 (100)
Q Consensus 22 ~~~~~~~~~i~~~e~~~~~~--------~-~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~ 72 (100)
......++.|+++++.++++ + +.+|||||++.||+.|||| ||+|+|+..
T Consensus 4 ~~~~~~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~--ga~~i~~~~ 61 (158)
T 3tg1_B 4 PKQLASIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQ--GAVHINCAD 61 (158)
T ss_dssp -------CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBT--TCEECCCSS
T ss_pred CCCCCCCcEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCC--CceeechhH
Confidence 34567789999999999886 2 5899999999999999999 999999863
No 49
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=98.91 E-value=1.8e-09 Score=83.60 Aligned_cols=62 Identities=16% Similarity=0.274 Sum_probs=50.4
Q ss_pred CCcceeCHHHHHHHhh-C-CCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhc-CCCCceeC
Q 034227 26 AEVITVDVRAAKNLLE-S-GYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC-KEEDRLVV 100 (100)
Q Consensus 26 ~~~~~i~~~e~~~~~~-~-~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~-~~~~~viv 100 (100)
..++.|+++++.++++ + +.+|||||+++||+.|||| ||+|+|+. +|...+..+. +++++||+
T Consensus 4 ~~~~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIp--gAv~ip~~-----------~~~~~~~~l~~~~~~~iVv 68 (539)
T 1yt8_A 4 SQIAVRTFHDIRAALLARRELALLDVREEDPFAQAHPL--FAANLPLS-----------RLELEIHARVPRRDTPITV 68 (539)
T ss_dssp --CEEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCT--TCEECCGG-----------GHHHHHHHHSCCTTSCEEE
T ss_pred CcCcccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCC--CCEECCHH-----------HHHHHHHhhCCCCCCeEEE
Confidence 3478999999999987 3 6899999999999999999 99999986 5666666553 57888875
No 50
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.90 E-value=6.7e-10 Score=84.37 Aligned_cols=60 Identities=22% Similarity=0.415 Sum_probs=48.5
Q ss_pred CcceeCHHHHHHHhh-CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 27 EVITVDVRAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 27 ~~~~i~~~e~~~~~~-~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
..+.++++++.++++ ++.+|||+|+++||+.|||| ||+|+|+. ++.+.+.. ++++++||+
T Consensus 372 ~~~~i~~~~l~~~~~~~~~~lvDvR~~~e~~~ghIp--gA~~ip~~-----------~l~~~~~~-l~~~~~vvv 432 (474)
T 3tp9_A 372 SYANVSPDEVRGALAQQGLWLLDVRNVDEWAGGHLP--QAHHIPLS-----------KLAAHIHD-VPRDGSVCV 432 (474)
T ss_dssp CCEEECHHHHHHTTTTTCCEEEECSCHHHHHHCBCT--TCEECCHH-----------HHTTTGGG-SCSSSCEEE
T ss_pred cccccCHHHHHHHhcCCCcEEEECCCHHHHhcCcCC--CCEECCHH-----------HHHHHHhc-CCCCCEEEE
Confidence 457799999999887 57899999999999999999 99999985 33333333 678888774
No 51
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=98.89 E-value=1.6e-09 Score=80.84 Aligned_cols=70 Identities=13% Similarity=0.167 Sum_probs=55.0
Q ss_pred cceeCHHHHHHHhhCCCeEEecCC--------hhhHhccCCCCCCeeeecccc-CCC-------CCCCCCH-HHHHHHHh
Q 034227 28 VITVDVRAAKNLLESGYGYLDVRT--------AEEFKEGHVDAAKIFNIPYMF-NTP-------EGRVKNP-DFLKKVRS 90 (100)
Q Consensus 28 ~~~i~~~e~~~~~~~~~~lIDvR~--------~~e~~~ghIp~~gA~~ip~~~-~~~-------~g~~~~~-~~~~~~~~ 90 (100)
...|+++++.+++++ .+|||||+ ++||+.|||| ||+|+|+.. +.. .+.+++. +|.+.+..
T Consensus 13 ~~~Is~~el~~~l~~-~~iIDvR~~~~~~~~~~~ey~~gHIp--GAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~ 89 (373)
T 1okg_A 13 KVFLDPSEVADHLAE-YRIVDCRYSLKIKDHGSIQYAKEHVK--SAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA 89 (373)
T ss_dssp CCEECHHHHTTCGGG-SEEEECCCCSSSTTTTTTHHHHCEET--TCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred CcEEcHHHHHHHcCC-cEEEEecCCccccccchhHHhhCcCC--CCEEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence 578999999988866 89999998 6999999999 999999974 422 2455554 56666665
Q ss_pred h-cCCCCceeC
Q 034227 91 L-CKEEDRLVV 100 (100)
Q Consensus 91 ~-~~~~~~viv 100 (100)
. ++++++|||
T Consensus 90 ~gi~~d~~VVv 100 (373)
T 1okg_A 90 NGMAGELPVLC 100 (373)
T ss_dssp TTCSSSSCEEE
T ss_pred cCCCCCCeEEE
Confidence 4 688899875
No 52
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=98.89 E-value=9.4e-10 Score=77.00 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=40.0
Q ss_pred CCCcceeCHHHHHHHhhC-------CCeEEecCChhhHhccCCCCCCeeeeccc
Q 034227 25 GAEVITVDVRAAKNLLES-------GYGYLDVRTAEEFKEGHVDAAKIFNIPYM 71 (100)
Q Consensus 25 ~~~~~~i~~~e~~~~~~~-------~~~lIDvR~~~e~~~ghIp~~gA~~ip~~ 71 (100)
...++.|+++++.++++. +.+|||||++.||+.|||| ||+|+|+.
T Consensus 53 ~~~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIp--GAinIP~~ 104 (216)
T 3op3_A 53 HQDLKYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQ--GALNLYSQ 104 (216)
T ss_dssp CSSSEEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEET--TCEECCSH
T ss_pred CCCCCEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCcc--CCEECChH
Confidence 346889999999999973 4789999999999999999 99999984
No 53
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.88 E-value=1e-09 Score=83.34 Aligned_cols=63 Identities=24% Similarity=0.373 Sum_probs=52.5
Q ss_pred CCCcceeCHHHHHHHhhCCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 25 GAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 25 ~~~~~~i~~~e~~~~~~~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
...++.|++++++++++++ +|||+|+++||+.|||| ||+|+|+. ..|.+.+.++.+++++|||
T Consensus 269 ~~~~~~is~~~l~~~l~~~-~iiD~R~~~~y~~ghIp--GA~~i~~~----------~~~~~~~~~l~~~~~~vvv 331 (474)
T 3tp9_A 269 APERVDLPPERVRAWREGG-VVLDVRPADAFAKRHLA--GSLNIPWN----------KSFVTWAGWLLPADRPIHL 331 (474)
T ss_dssp CCEECCCCGGGHHHHHHTS-EEEECSCHHHHHHSEET--TCEECCSS----------TTHHHHHHHHCCSSSCEEE
T ss_pred cCCCceeCHHHHHHHhCCC-EEEECCChHHHhccCCC--CeEEECcc----------hHHHHHHHhcCCCCCeEEE
Confidence 4456789999999999876 99999999999999999 99999985 2466777766677888764
No 54
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=98.87 E-value=2.1e-09 Score=80.88 Aligned_cols=69 Identities=20% Similarity=0.338 Sum_probs=53.2
Q ss_pred eeCHHHHHHHhh-CCCeEEecCChhhH-----------hccCCCCCCeeeeccc--------cCCCCCCCCCHHHH-HHH
Q 034227 30 TVDVRAAKNLLE-SGYGYLDVRTAEEF-----------KEGHVDAAKIFNIPYM--------FNTPEGRVKNPDFL-KKV 88 (100)
Q Consensus 30 ~i~~~e~~~~~~-~~~~lIDvR~~~e~-----------~~ghIp~~gA~~ip~~--------~~~~~g~~~~~~~~-~~~ 88 (100)
.++++++.++++ ++.+|||||+++|| +.|||| ||+|+|+. +++++|.+.+.+.+ +.+
T Consensus 273 ~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIp--gAi~ip~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 350 (423)
T 2wlr_A 273 MLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIA--GARWGHAGSDSTHMEDFHNPDGTMRSADDITAMW 350 (423)
T ss_dssp EECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEET--TCEECCCCSSTTCCGGGBCTTSSBCCHHHHHHHH
T ss_pred eecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCC--CccccccccccccHHHHcCCCCcCCCHHHHHHHH
Confidence 488999998887 46889999999999 889999 99999975 33567777776444 444
Q ss_pred Hhh-cCCCCceeC
Q 034227 89 RSL-CKEEDRLVV 100 (100)
Q Consensus 89 ~~~-~~~~~~viv 100 (100)
.+. ++++++||+
T Consensus 351 ~~~~~~~~~~ivv 363 (423)
T 2wlr_A 351 KAWNIKPEQQVSF 363 (423)
T ss_dssp HTTTCCTTSEEEE
T ss_pred HHcCCCCCCcEEE
Confidence 322 678888874
No 55
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=98.86 E-value=2.6e-09 Score=82.68 Aligned_cols=60 Identities=15% Similarity=0.223 Sum_probs=50.3
Q ss_pred CcceeCHHHHHHHhh-CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 27 EVITVDVRAAKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 27 ~~~~i~~~e~~~~~~-~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
.+..++++++.++++ ++.+|||||+++||+.|||| ||+|+|.. ++.+.+.+ ++++++||+
T Consensus 375 ~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~~ghIp--gA~~ip~~-----------~l~~~l~~-l~~~~~ivv 435 (539)
T 1yt8_A 375 RADTIDPTTLADWLGEPGTRVLDFTASANYAKRHIP--GAAWVLRS-----------QLKQALER-LGTAERYVL 435 (539)
T ss_dssp CCCEECHHHHHHHTTSTTEEEEECSCHHHHHHCBCT--TCEECCGG-----------GHHHHHHH-HCCCSEEEE
T ss_pred cCCccCHHHHHHHhcCCCeEEEEeCCHHHhhcCcCC--CchhCCHH-----------HHHHHHHh-CCCCCeEEE
Confidence 457899999999987 46899999999999999999 99999985 55555554 688888874
No 56
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.81 E-value=6.1e-10 Score=85.47 Aligned_cols=62 Identities=18% Similarity=0.335 Sum_probs=48.6
Q ss_pred cCCCcceeCHHHHHHHhhCCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 24 SGAEVITVDVRAAKNLLESGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 24 ~~~~~~~i~~~e~~~~~~~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
....++.|+++++.++ +++.+|||||+++||+.|||| ||+|+|+.. +.+.+.+ ++++++||+
T Consensus 468 ~~~~~~~i~~~~~~~~-~~~~~~iDvR~~~e~~~~~i~--ga~~ip~~~-----------l~~~~~~-~~~~~~iv~ 529 (565)
T 3ntd_A 468 IKGDATPIHFDQIDNL-SEDQLLLDVRNPGELQNGGLE--GAVNIPVDE-----------LRDRMHE-LPKDKEIII 529 (565)
T ss_dssp HHTSCCEECTTTTTSC-CTTEEEEECSCGGGGGGCCCT--TCEECCGGG-----------TTTSGGG-SCTTSEEEE
T ss_pred cccccceeeHHHHHhC-CCCcEEEEeCCHHHHhcCCCC--CcEECCHHH-----------HHHHHhh-cCCcCeEEE
Confidence 3466789999999876 567899999999999999999 999999963 2223333 678888764
No 57
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=98.80 E-value=5.5e-09 Score=78.61 Aligned_cols=70 Identities=7% Similarity=0.055 Sum_probs=54.4
Q ss_pred ceeCHHHHHHHhh---------CCCeEEecC--ChhhHhccCCCCCCeeeeccccC-C-CCCCCCCHH-HHHHHHhh-cC
Q 034227 29 ITVDVRAAKNLLE---------SGYGYLDVR--TAEEFKEGHVDAAKIFNIPYMFN-T-PEGRVKNPD-FLKKVRSL-CK 93 (100)
Q Consensus 29 ~~i~~~e~~~~~~---------~~~~lIDvR--~~~e~~~ghIp~~gA~~ip~~~~-~-~~g~~~~~~-~~~~~~~~-~~ 93 (100)
..++++++.++++ ++.+|||+| +++||+.|||| ||+|+|+..+ + +++.+++++ +.+.+.+. ++
T Consensus 124 ~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~~~ghIp--gA~nip~~~~~~~~~~~~~~~~~l~~~~~~~gi~ 201 (423)
T 2wlr_A 124 QLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLYLISHIP--GADYIDTNEVESEPLWNKVSDEQLKAMLAKHGIR 201 (423)
T ss_dssp GEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHHHHCBCT--TCEEEEGGGTEETTTTEECCHHHHHHHHHHTTCC
T ss_pred cccCHHHHHHHhhccccccccCCCeEEEEecCCCchhhccCcCC--CcEEcCHHHhccCCCCCCCCHHHHHHHHHHcCCC
Confidence 5789999998876 257899999 99999999999 9999999765 3 457777654 44455443 57
Q ss_pred CCCceeC
Q 034227 94 EEDRLVV 100 (100)
Q Consensus 94 ~~~~viv 100 (100)
++++||+
T Consensus 202 ~~~~ivv 208 (423)
T 2wlr_A 202 HDTTVIL 208 (423)
T ss_dssp TTSEEEE
T ss_pred CCCeEEE
Confidence 8888875
No 58
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=98.70 E-value=6.4e-09 Score=72.21 Aligned_cols=58 Identities=22% Similarity=0.261 Sum_probs=41.5
Q ss_pred eeCHHHHHHHhhCCCeEEecCChhhHhc----------cCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCcee
Q 034227 30 TVDVRAAKNLLESGYGYLDVRTAEEFKE----------GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLV 99 (100)
Q Consensus 30 ~i~~~e~~~~~~~~~~lIDvR~~~e~~~----------ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~vi 99 (100)
.++++++.+ +.+|||+|+++||+. |||| ||+|+|+..+.... +..+.. .++++++||
T Consensus 122 ~i~~~e~~~----~~~liDvR~~~e~~~~~~~~~~~~~ghIp--gA~~ip~~~~~~~~-----e~~~~~--~~~~~~~iv 188 (230)
T 2eg4_A 122 LLTADEAAR----HPLLLDVRSPEEFQGKVHPPCCPRGGRIP--GSKNAPLELFLSPE-----GLLERL--GLQPGQEVG 188 (230)
T ss_dssp BCCHHHHHT----CSCEEECSCHHHHTTSCCCTTSSSCCBCT--TCEECCGGGGGCCT-----THHHHH--TCCTTCEEE
T ss_pred eeCHHHHhh----CCeEEeCCCHHHcCcccCCCCCccCCCCC--CcEEcCHHHhCChH-----HHHHhc--CCCCCCCEE
Confidence 477777765 678999999999998 9999 99999987542110 111111 267888887
Q ss_pred C
Q 034227 100 V 100 (100)
Q Consensus 100 v 100 (100)
+
T Consensus 189 ~ 189 (230)
T 2eg4_A 189 V 189 (230)
T ss_dssp E
T ss_pred E
Confidence 4
No 59
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=98.62 E-value=3.7e-08 Score=73.46 Aligned_cols=58 Identities=19% Similarity=0.436 Sum_probs=41.2
Q ss_pred hCCCeEEecCChhhHh-----------ccCCCCCCeeeeccccC---CCCCC-CCCHHHHHH-HHhh---cCC---CCce
Q 034227 41 ESGYGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFN---TPEGR-VKNPDFLKK-VRSL---CKE---EDRL 98 (100)
Q Consensus 41 ~~~~~lIDvR~~~e~~-----------~ghIp~~gA~~ip~~~~---~~~g~-~~~~~~~~~-~~~~---~~~---~~~v 98 (100)
+++.+|||||+++||+ .|||| ||+|+|+..+ +++|. +++++.+++ +.+. +++ +++|
T Consensus 172 ~~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIp--GAiniP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~i 249 (373)
T 1okg_A 172 PPQAIITDARSADRFASTVRPYAADKMPGHIE--GARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSF 249 (373)
T ss_dssp CTTCCEEECSCHHHHTCCSSCCTTCSSSSCST--TCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTS
T ss_pred ccCceEEeCCCHHHccccccccccCCcCccCC--CcEEecHHHhhccCCCCCccCCHHHHHHHHHhhhcCCCcccCCCCE
Confidence 3467899999999999 99999 9999999765 44666 666554443 3332 367 8888
Q ss_pred eC
Q 034227 99 VV 100 (100)
Q Consensus 99 iv 100 (100)
|+
T Consensus 250 vv 251 (373)
T 1okg_A 250 VF 251 (373)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 60
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=98.61 E-value=8e-08 Score=70.87 Aligned_cols=69 Identities=19% Similarity=0.334 Sum_probs=47.9
Q ss_pred eeCHHHHHHHhhC-----CCeEEecCChhhHh-----------ccCCCCCCeeeeccccC-CCCCCCCC-H-H-HHHHH-
Q 034227 30 TVDVRAAKNLLES-----GYGYLDVRTAEEFK-----------EGHVDAAKIFNIPYMFN-TPEGRVKN-P-D-FLKKV- 88 (100)
Q Consensus 30 ~i~~~e~~~~~~~-----~~~lIDvR~~~e~~-----------~ghIp~~gA~~ip~~~~-~~~g~~~~-~-~-~~~~~- 88 (100)
.++.+++.+.++. +.+|||+|+++||. .|||| ||+|+|+..+ +++|.... . + +...+
T Consensus 185 v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIP--GA~nlP~~~~ld~~~~~~~~~~e~l~~~l~ 262 (327)
T 3utn_X 185 IVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIP--GTQPLPYGSLLDPETKTYPEAGEAIHATLE 262 (327)
T ss_dssp EECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCT--TEEECCGGGGSCTTTCCCCCTTHHHHHHHH
T ss_pred eecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCC--CCcccChhhccCCCCCCCCCcHHHHHHHHH
Confidence 4778888887763 36899999999995 59999 9999999864 66664432 1 2 22222
Q ss_pred ---Hh---hcCCCCceeC
Q 034227 89 ---RS---LCKEEDRLVV 100 (100)
Q Consensus 89 ---~~---~~~~~~~viv 100 (100)
.. -++++++||+
T Consensus 263 ~~~~~~~~gid~~k~vI~ 280 (327)
T 3utn_X 263 KALKDFHCTLDPSKPTIC 280 (327)
T ss_dssp HHHHHTTCCCCTTSCEEE
T ss_pred HHHHHhhcCCCCCCCEEE
Confidence 21 1578888874
No 61
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=98.53 E-value=1e-07 Score=66.08 Aligned_cols=56 Identities=9% Similarity=0.052 Sum_probs=37.4
Q ss_pred CCCeEEecCChhhHhccCCCCCCeeeeccc--cCCCC---CCCCC-HHHHHHHHhhcCCCCceeC
Q 034227 42 SGYGYLDVRTAEEFKEGHVDAAKIFNIPYM--FNTPE---GRVKN-PDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 42 ~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~--~~~~~---g~~~~-~~~~~~~~~~~~~~~~viv 100 (100)
++.+|||+|+++||+.|||| ||+|+|+. .+... +.+++ .+|.+.+.. ++.+++||+
T Consensus 5 ~~~~iiDvR~~~ey~~ghIp--gAi~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~ivv 66 (230)
T 2eg4_A 5 EDAVLVDTRPRPAYEAGHLP--GARHLDLSAPKLRLREEAELKALEGGLTELFQT-LGLRSPVVL 66 (230)
T ss_dssp TTCEEEECSCHHHHHHCBCT--TCEECCCCSCCCCCCSHHHHHHHHHHHHHHHHH-TTCCSSEEE
T ss_pred CCEEEEECCChhhHhhCcCC--CCEECCccchhcccCCCCCcCCCHHHHHHHHHh-cCCCCEEEE
Confidence 46899999999999999999 99999986 32110 11111 234444444 455777764
No 62
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.51 E-value=1.3e-08 Score=77.63 Aligned_cols=51 Identities=22% Similarity=0.347 Sum_probs=0.0
Q ss_pred HHHHhh-CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 36 AKNLLE-SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 36 ~~~~~~-~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
+.++++ ++.+|||||+++||+.|||| ||+|+|+.. +.+.+.+ ++++++||+
T Consensus 379 ~~~~~~~~~~~liDvR~~~e~~~ghIp--gA~~ip~~~-----------l~~~~~~-l~~~~~iv~ 430 (466)
T 3r2u_A 379 HSEDITGNESHILDVRNDNEWNNGHLS--QAVHVPHGK-----------LLETDLP-FNKNDVIYV 430 (466)
T ss_dssp ------------------------------------------------------------------
T ss_pred HHHHHhCCCcEEEEeCCHHHHhcCcCC--CCEECCHHH-----------HHHHHhh-CCCCCeEEE
Confidence 445554 46889999999999999999 999999862 3333333 667777764
No 63
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=98.49 E-value=3.5e-07 Score=67.44 Aligned_cols=75 Identities=15% Similarity=0.084 Sum_probs=56.5
Q ss_pred cCCCcceeCHHHHHHHhh-C---CCeEEecC---------ChhhH-hccCCCCCCeeeeccccC-CC----CCCCCCH-H
Q 034227 24 SGAEVITVDVRAAKNLLE-S---GYGYLDVR---------TAEEF-KEGHVDAAKIFNIPYMFN-TP----EGRVKNP-D 83 (100)
Q Consensus 24 ~~~~~~~i~~~e~~~~~~-~---~~~lIDvR---------~~~e~-~~ghIp~~gA~~ip~~~~-~~----~g~~~~~-~ 83 (100)
++..++.|||+++.+++. + .+++||++ ..+|| ++|||| ||+++.++.+ +. .++++++ .
T Consensus 23 sm~~~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIP--GAv~~Dld~~~d~~~~~ph~LP~~~~ 100 (327)
T 3utn_X 23 SMPLFDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIP--NSIFFDIDAISDKKSPYPHMFPTKKV 100 (327)
T ss_dssp -CCSCEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCT--TCEECCTTTSSCTTSSSTTCCCCHHH
T ss_pred cCccccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCC--CCeeeChHHhcCCCCCCCCCCcCHHH
Confidence 567788999999999996 3 36789985 23466 789999 9999998765 22 2467765 6
Q ss_pred HHHHHHhh-cCCCCceeC
Q 034227 84 FLKKVRSL-CKEEDRLVV 100 (100)
Q Consensus 84 ~~~~~~~~-~~~~~~viv 100 (100)
|.+.+.++ ++++++|||
T Consensus 101 f~~~l~~lGI~~d~~VVv 118 (327)
T 3utn_X 101 FDDAMSNLGVQKDDILVV 118 (327)
T ss_dssp HHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHcCCCCCCEEEE
Confidence 77777777 789998875
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.42 E-value=1.7e-07 Score=71.44 Aligned_cols=47 Identities=21% Similarity=0.497 Sum_probs=38.2
Q ss_pred CCCeEEecCChhhHhccCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhcCCCCceeC
Q 034227 42 SGYGYLDVRTAEEFKEGHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLCKEEDRLVV 100 (100)
Q Consensus 42 ~~~~lIDvR~~~e~~~ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~~~~~~viv 100 (100)
++.+|||+|++++|+.|||| ||+|+|+. ..|...+...++++++||+
T Consensus 295 ~~~~ilD~R~~~~y~~gHIp--GAv~ip~~----------~~~~~~~~~~~~~~~~vvl 341 (466)
T 3r2u_A 295 TNRLTFDLRSKEAYHGGHIE--GTINIPYD----------KNFINQIGWYLNYDQEINL 341 (466)
T ss_dssp CCSEEEECSCHHHHHHSCCT--TCEECCSS----------TTHHHHHTTTCCTTSCEEE
T ss_pred CCeEEEECCCHHHHhhCCCC--CcEECCcc----------HHHHHHHHhccCCCCeEEE
Confidence 56899999999999999999 99999984 2466666655677888764
No 65
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=94.85 E-value=0.0036 Score=41.98 Aligned_cols=23 Identities=22% Similarity=0.242 Sum_probs=20.6
Q ss_pred CeEEecCChhhHhccCCCCCCeeeecccc
Q 034227 44 YGYLDVRTAEEFKEGHVDAAKIFNIPYMF 72 (100)
Q Consensus 44 ~~lIDvR~~~e~~~ghIp~~gA~~ip~~~ 72 (100)
.++||||++.||+ | ||+|+|...
T Consensus 122 ~~liDvRe~~E~~----p--gA~~iprg~ 144 (168)
T 1v8c_A 122 GAVVRFREVEPLK----V--GSLSIPQLR 144 (168)
T ss_dssp TEEEEEEEEEEEE----E--TTEEEEEEE
T ss_pred eEEEECCChhhcC----C--CCEEcChhH
Confidence 3899999999999 9 999999764
No 66
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=94.60 E-value=0.062 Score=34.67 Aligned_cols=64 Identities=16% Similarity=0.177 Sum_probs=38.4
Q ss_pred eeCHHHHHHHhhCC-CeEEecCChhh------------Hhc-cCCCCCCeeeeccccCCCCCCCCCHHHHHHHHhhc-CC
Q 034227 30 TVDVRAAKNLLESG-YGYLDVRTAEE------------FKE-GHVDAAKIFNIPYMFNTPEGRVKNPDFLKKVRSLC-KE 94 (100)
Q Consensus 30 ~i~~~e~~~~~~~~-~~lIDvR~~~e------------~~~-ghIp~~gA~~ip~~~~~~~g~~~~~~~~~~~~~~~-~~ 94 (100)
.++++++..+.+.+ ..|||+|++.| |.. .+|+ |.+|+|.... . ...+....+.+.+ +.
T Consensus 29 ~~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~--~~~~iPv~~~----~-~~~~~~~~~~~~l~~~ 101 (156)
T 2f46_A 29 QLTKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVT--GFHHQPVTAR----D-IQKHDVETFRQLIGQA 101 (156)
T ss_dssp CCCGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCC--EEEECCCCTT----T-CCHHHHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCH--hheECccCCC----C-CCHHHHHHHHHHHHhC
Confidence 35778877765544 68999998766 223 3588 7999998521 1 1233333333333 35
Q ss_pred CCceeC
Q 034227 95 EDRLVV 100 (100)
Q Consensus 95 ~~~viv 100 (100)
++||+|
T Consensus 102 ~~pVlv 107 (156)
T 2f46_A 102 EYPVLA 107 (156)
T ss_dssp CSSEEE
T ss_pred CCCEEE
Confidence 777764
No 67
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=61.40 E-value=5.4 Score=24.49 Aligned_cols=39 Identities=8% Similarity=0.026 Sum_probs=22.5
Q ss_pred CHHHHHHHhhCC-CeEEecCChhhHhccCCCCCCeeeecc
Q 034227 32 DVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPY 70 (100)
Q Consensus 32 ~~~e~~~~~~~~-~~lIDvR~~~e~~~ghIp~~gA~~ip~ 70 (100)
+++++..+.+.+ ..|||+|+..|......++-.-.++|+
T Consensus 24 ~~~~~~~L~~~gi~~Vi~l~~~~~~~~~~~~~~~~~~~~~ 63 (150)
T 4erc_A 24 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRI 63 (150)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCC
T ss_pred CHHHHHHHHHCCCCEEEEcCCCCCCcccccCCceEEEEec
Confidence 466665554455 589999987765444444112344554
No 68
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=59.99 E-value=6 Score=24.17 Aligned_cols=39 Identities=8% Similarity=0.026 Sum_probs=22.8
Q ss_pred CHHHHHHHhhCC-CeEEecCChhhHhccCCCCCCeeeecc
Q 034227 32 DVRAAKNLLESG-YGYLDVRTAEEFKEGHVDAAKIFNIPY 70 (100)
Q Consensus 32 ~~~e~~~~~~~~-~~lIDvR~~~e~~~ghIp~~gA~~ip~ 70 (100)
++++...+.+.+ ..|||+|+..|+.....++.+-.++|+
T Consensus 25 ~~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~~~~~~~~~~ 64 (151)
T 2img_A 25 LPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRI 64 (151)
T ss_dssp SHHHHHHHHHTTEEEEEECSSSCCTTGGGCTTSEEEECCC
T ss_pred cHHHHHHHHHCCCCEEEECCCCCCCCHHHHhhCCeEEEeC
Confidence 455555444445 579999998776544444223445554
No 69
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=33.67 E-value=69 Score=22.51 Aligned_cols=44 Identities=18% Similarity=0.278 Sum_probs=27.1
Q ss_pred cceeCHHHHHHHhhCC-CeEEecCChhhHhcc----CCCCCCeeeeccc
Q 034227 28 VITVDVRAAKNLLESG-YGYLDVRTAEEFKEG----HVDAAKIFNIPYM 71 (100)
Q Consensus 28 ~~~i~~~e~~~~~~~~-~~lIDvR~~~e~~~g----hIp~~gA~~ip~~ 71 (100)
...++++++..+.+-+ ..|||.|++.|.... ..+|..-+++|..
T Consensus 53 l~~lt~~d~~~L~~lGI~tVIDLR~~~E~~~~~pd~~~~Gi~~~~iPi~ 101 (296)
T 1ywf_A 53 LSRLDDAGRATLRRLGITDVADLRSSREVARRGPGRVPDGIDVHLLPFP 101 (296)
T ss_dssp CTTCCHHHHHHHHHHTCCEEEECCCHHHHHHHCSCCCCTTCEEEECCCC
T ss_pred cccCCHHHHHHHHhCCCCEEEECcChhhhhccCCCCCCCCCEEEEecCc
Confidence 3457788876655534 689999999886532 2232234556653
No 70
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=21.09 E-value=1.5e+02 Score=19.19 Aligned_cols=25 Identities=16% Similarity=0.203 Sum_probs=16.1
Q ss_pred HHHHHHHhhCC-CeEEecCChhhHhc
Q 034227 33 VRAAKNLLESG-YGYLDVRTAEEFKE 57 (100)
Q Consensus 33 ~~e~~~~~~~~-~~lIDvR~~~e~~~ 57 (100)
.+++..+.+.+ ..|||+|++.|...
T Consensus 61 ~~d~~~L~~~gi~~Vv~l~~~~E~~~ 86 (212)
T 1fpz_A 61 QKDTEELKSCGIQDIFVFCTRGELSK 86 (212)
T ss_dssp HHHHHHHHHHTCCEEEECCCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEcCCHHHHHh
Confidence 45554444434 68999999876543
Done!