Query 034229
Match_columns 100
No_of_seqs 110 out of 616
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 19:10:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hks_A EIF-5A-2, eukaryotic tr 100.0 1.5E-36 5.1E-41 221.3 10.8 91 1-92 9-99 (167)
2 3er0_A Eukaryotic translation 100.0 5.9E-36 2E-40 218.0 9.9 90 1-91 11-100 (167)
3 1x6o_A Eukaryotic initiation f 100.0 2.5E-34 8.5E-39 210.6 10.3 91 1-92 9-101 (174)
4 3cpf_A Eukaryotic translation 100.0 3.4E-31 1.2E-35 187.1 10.5 77 16-92 1-77 (138)
5 1iz6_A Initiation factor 5A; S 100.0 8.1E-30 2.8E-34 180.2 10.8 76 17-92 2-77 (138)
6 1bkb_A Translation initiation 100.0 2.6E-29 8.9E-34 176.8 10.4 73 19-91 6-78 (136)
7 2eif_A IF-5A, protein (eukaryo 100.0 8.8E-29 3E-33 174.4 11.3 77 16-92 5-81 (136)
8 3a5z_B EF-P, elongation factor 99.9 5E-26 1.7E-30 168.3 9.6 75 17-92 2-76 (191)
9 1ueb_A EF-P, TT0860, elongatio 99.9 1.6E-25 5.3E-30 164.7 9.6 71 21-92 1-71 (184)
10 1yby_A Translation elongation 99.9 1E-24 3.4E-29 164.0 9.1 76 16-92 26-101 (215)
11 3tre_A EF-P, elongation factor 99.9 2.1E-24 7.1E-29 159.6 9.7 70 21-91 6-75 (191)
12 3oyy_A EF-P, elongation factor 99.9 3.8E-24 1.3E-28 158.3 9.7 70 21-91 4-73 (191)
13 1khi_A HEX1; membrane sealing, 99.9 2.4E-23 8E-28 152.8 8.6 72 11-87 24-104 (176)
14 3q3y_A HEVB EV93 3C protease; 74.2 7.4 0.00025 28.3 5.7 65 22-93 116-182 (191)
15 1ed7_A Chitinase A1, (CHBD-CHI 62.2 2.4 8.3E-05 23.6 0.8 26 26-51 7-32 (45)
16 1k0h_A Gpfii; twisted beta-san 59.9 2.2 7.4E-05 28.6 0.3 34 23-59 71-104 (117)
17 3qx1_A FAS-associated factor 1 59.0 12 0.00043 22.6 3.8 30 52-82 2-31 (84)
18 1at0_A 17-hedgehog; developmen 57.2 15 0.0005 24.7 4.2 30 19-48 84-119 (145)
19 2fhd_A RAD9 homolog, DNA repai 57.0 24 0.00084 24.9 5.4 41 22-62 59-110 (153)
20 2f9h_A PTS system, IIA compone 56.7 10 0.00035 25.8 3.3 21 25-45 53-73 (129)
21 3r8s_P 50S ribosomal protein L 47.0 61 0.0021 21.6 6.6 65 22-88 14-87 (114)
22 3v2d_T 50S ribosomal protein L 46.9 71 0.0024 22.3 6.6 64 23-88 18-90 (146)
23 2ftc_B Mitochondrial ribosomal 44.6 72 0.0025 21.7 6.5 33 48-83 73-111 (136)
24 2z14_A EF-hand domain-containi 44.0 21 0.00072 24.1 3.3 25 22-46 84-108 (133)
25 2zjr_M 50S ribosomal protein L 41.9 62 0.0021 23.0 5.6 64 23-88 23-95 (166)
26 3od3_A Blue copper oxidase CUE 40.9 38 0.0013 27.2 4.9 52 28-87 181-232 (488)
27 3qzr_A 3C protein; chymotrypsi 40.8 97 0.0033 22.1 7.0 54 33-93 129-184 (187)
28 2exd_A NFED short homolog; mem 40.2 37 0.0013 20.8 3.7 36 25-64 25-60 (80)
29 4dcd_A Protease 3C, genome pol 38.2 1.1E+02 0.0037 21.9 7.0 64 22-92 121-186 (190)
30 1rl2_A Protein (ribosomal prot 36.5 62 0.0021 22.1 4.7 62 18-83 41-124 (137)
31 1o6a_A Putative flagellar moto 33.9 50 0.0017 20.7 3.7 20 23-42 36-58 (96)
32 1p9k_A ORF, hypothetical prote 33.9 38 0.0013 20.1 3.0 18 26-43 61-78 (79)
33 2lcj_A PAB POLC intein; hydrol 33.0 69 0.0023 21.9 4.6 17 20-36 104-120 (185)
34 3rby_A Uncharacterized protein 31.2 36 0.0012 25.6 3.0 27 20-46 218-244 (245)
35 3gs9_A Protein GP18; NP_465809 30.9 88 0.003 23.7 5.3 40 26-67 55-94 (342)
36 1giy_D 50S ribosomal protein L 29.6 1.1E+02 0.0039 21.7 5.3 62 18-83 41-124 (178)
37 2buj_A Serine/threonine-protei 27.4 1.5E+02 0.005 20.5 5.7 40 27-71 18-57 (317)
38 2l55_A SILB,silver efflux prot 27.3 91 0.0031 19.1 4.0 30 23-52 44-78 (82)
39 2pp6_A Gifsy-2 prophage ATP-bi 27.2 75 0.0026 20.9 3.7 35 14-48 49-85 (102)
40 2eqm_A PHD finger protein 20-l 25.8 60 0.002 20.3 3.0 36 11-46 3-44 (88)
41 1ix5_A FKBP; ppiase, isomerase 24.4 52 0.0018 22.1 2.6 20 26-45 103-122 (151)
42 3lag_A Uncharacterized protein 23.8 1.2E+02 0.004 18.5 4.1 63 30-93 7-81 (98)
43 3udc_A Small-conductance mecha 23.2 65 0.0022 23.6 3.2 22 25-46 127-148 (285)
44 2ftc_K 39S ribosomal protein L 23.2 1.6E+02 0.0054 19.0 6.9 21 58-78 40-60 (98)
45 4e72_A Uncharacterized protein 23.0 1.1E+02 0.0037 21.7 4.2 24 49-72 109-132 (226)
46 3uep_A YSCQ-C, type III secret 22.9 1.3E+02 0.0043 18.9 4.2 20 23-42 36-58 (96)
47 3k3s_A Altronate hydrolase; st 22.6 1.1E+02 0.0038 20.0 3.9 43 21-71 34-76 (105)
48 3pr9_A FKBP-type peptidyl-prol 22.6 84 0.0029 21.4 3.5 20 27-46 103-122 (157)
49 2kj6_A Tubulin folding cofacto 22.1 51 0.0017 20.7 2.1 31 52-82 9-40 (97)
50 2cp2_A CLIP-115, KIAA0291; mic 22.1 41 0.0014 21.6 1.6 32 11-42 3-35 (95)
51 2kca_A Bacteriophage SPP1 comp 22.0 1.4E+02 0.0048 18.0 7.6 38 11-48 49-90 (109)
52 3h43_A Proteasome-activating n 22.0 38 0.0013 21.1 1.4 23 24-46 53-75 (85)
53 1rie_A Rieske iron-sulfur prot 21.9 1.2E+02 0.0041 19.5 4.0 27 19-45 6-34 (129)
54 2b0f_A Picornain 3C (protease 21.7 2.2E+02 0.0074 20.1 5.8 53 23-82 114-168 (182)
55 2z0t_A Putative uncharacterize 21.7 85 0.0029 20.5 3.2 34 11-45 14-54 (109)
56 1hfu_A Laccase 1; oxidoreducta 21.2 2.6E+02 0.0091 21.9 6.6 49 28-84 163-220 (503)
57 2lqk_A Transcriptional regulat 26.2 21 0.00071 21.4 0.0 26 25-50 5-31 (70)
58 2ifr_A Scytalidopepsin B; enzy 20.5 2.5E+02 0.0084 20.3 5.9 41 24-77 80-120 (206)
59 1o9y_A HRCQ2; secretory protei 20.3 75 0.0026 19.3 2.6 20 23-42 32-54 (84)
No 1
>3hks_A EIF-5A-2, eukaryotic translation initiation factor 5A-2; beta barrel, alternative splicing, hypusine, protein biosynthesis; 2.30A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-36 Score=221.26 Aligned_cols=91 Identities=75% Similarity=1.148 Sum_probs=74.9
Q ss_pred CCcccccccccccCCceeeeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCc
Q 034229 1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHN 80 (100)
Q Consensus 1 m~~~~~~~~~~~~~~~s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ 80 (100)
|||++++|+ ++|||||.|+||++++||+|++|+++|+||+|++++|+||||||+|+||+++|||+||+++|++|+++++
T Consensus 9 ~~~~~~~~~-~~~~gas~t~pi~~~dlrkG~~I~idG~P~~Vve~~~~KpGKhG~A~vr~k~knl~TGk~~E~tf~s~~k 87 (167)
T 3hks_A 9 MSDDEHHFE-ASESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHN 87 (167)
T ss_dssp ----------------CCEEEEEGGGCCTTSEEEETTEEEEEEEEEEECSSTTCCCEEEEEEEETTTCCEEEEEEETTSE
T ss_pred cCccccccc-ccCCCCCccEEEEHHHccCCCEEEECCEEEEEEEEEEeCCCCCCceEEEEEEEEcCCCCEEEEEEcCCCE
Confidence 899999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeEEEEeecc
Q 034229 81 CDVLIYASLSAF 92 (100)
Q Consensus 81 ve~~~le~~~~~ 92 (100)
+|+|+|+++++-
T Consensus 88 ve~~~ver~~~Q 99 (167)
T 3hks_A 88 CDVPHVNRVDYQ 99 (167)
T ss_dssp EEEECCEEEEEE
T ss_pred EEeeeEEEEEEE
Confidence 999999999984
No 2
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-36 Score=218.05 Aligned_cols=90 Identities=63% Similarity=1.023 Sum_probs=78.4
Q ss_pred CCcccccccccccCCceeeeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCc
Q 034229 1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHN 80 (100)
Q Consensus 1 m~~~~~~~~~~~~~~~s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ 80 (100)
|||.+++|+ ++|||||.|+||++++||+|++|+++|+||+|++++|+||||||+|+||++++||+||+++|.+|+++++
T Consensus 11 ~~~~~~~~~-~~~~~as~t~pi~a~dlrkG~~I~idG~p~~Vve~~~~KpGKHG~A~vr~k~knl~TG~k~E~tf~s~~k 89 (167)
T 3er0_A 11 MSDEEHTFE-TADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHN 89 (167)
T ss_dssp ------------CCCCCCCEEEETTTCCTTCEEEETTEEEEEEEEEEECCSSSSCCEEEEEEEESSSCCCEEEEEESSSE
T ss_pred ccccccccc-ccCCCCcceEEEEHHHccCCCEEEECCEEEEEEEEEEeCCCCcCceEEEEEEEEcCCCCEEEEEEcCCCc
Confidence 889999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeEEEEeec
Q 034229 81 CDVLIYASLSA 91 (100)
Q Consensus 81 ve~~~le~~~~ 91 (100)
+++|+|++++|
T Consensus 90 ve~~~ver~~~ 100 (167)
T 3er0_A 90 MEVPVVKRNEY 100 (167)
T ss_dssp EEECCCCEEEE
T ss_pred cccceEEEeeE
Confidence 99999999987
No 3
>1x6o_A Eukaryotic initiation factor 5A; SGPP, structural genomics, PSI; 1.60A {Leishmania braziliensis} SCOP: b.34.5.2 b.40.4.5 PDB: 1xtd_A
Probab=100.00 E-value=2.5e-34 Score=210.61 Aligned_cols=91 Identities=51% Similarity=0.874 Sum_probs=70.0
Q ss_pred CCcccc--cccccccCCceeeeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCC
Q 034229 1 MSDEEH--HFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSS 78 (100)
Q Consensus 1 m~~~~~--~~~~~~~~~~s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~ 78 (100)
|||..+ +|+ +++||+|.|+|+++++||+|++|+|+|+||+|++++|+||||||+|+||++++||+||+++|++|+++
T Consensus 9 ~~~~~~~~~~~-~~~~~as~t~~i~a~dlrkG~~I~idG~p~~Vve~~~~KpGKgG~A~vr~k~kni~TG~k~E~tf~s~ 87 (174)
T 1x6o_A 9 MSDEDHDFSHQ-GGGDNASKTYPLAAGALKKGGYVCINGRPCKVIDLSVSKTGKHGHAKVSIVATDIFTGNRLEDQAPST 87 (174)
T ss_dssp -------------------CEEEEEGGGCCTTCEEEETTEEEEEEEEEECCC----CCEEEEEEEETTTCCEEEEEEETT
T ss_pred cccccccccee-cCCCCCceeEEEEHHHccCCCEEEECCEEEEEEEEEecCCCCCCceEEEEEEEECCCCCEEEEEeCCC
Confidence 555443 599 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEeeEEEEeecc
Q 034229 79 HNCDVLIYASLSAF 92 (100)
Q Consensus 79 ~~ve~~~le~~~~~ 92 (100)
+++++|+|++++|-
T Consensus 88 ~kve~~~Ver~~~Q 101 (174)
T 1x6o_A 88 HNVEVPFVKTYTYS 101 (174)
T ss_dssp SEEEEECCEEEEEE
T ss_pred CEEEeeEEEEEEEE
Confidence 99999999999984
No 4
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=187.08 Aligned_cols=77 Identities=64% Similarity=1.000 Sum_probs=70.6
Q ss_pred ceeeeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeecc
Q 034229 16 ASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAF 92 (100)
Q Consensus 16 ~s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~ 92 (100)
||.|+|+++++||+|++|+++|+||+|+|++|+||||||+|+||++++||+||+++|++|++++++|+|++++++|-
T Consensus 1 ~~~t~~i~~~~lrkG~~i~~~g~p~~Vve~~~~KpGKgG~A~vr~k~knl~TG~~~e~tf~s~~kve~~~v~~~~~q 77 (138)
T 3cpf_A 1 GSATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDFQ 77 (138)
T ss_dssp -CCEEEEEGGGCCTTSEEEETTEEEEEEEEEEECC----CCEEEEEEEETTTCCEEEEEEETTSEEEEECCEEEEEE
T ss_pred CCccEEEEHHHCcCCCEEEECCEEEEEEEEEeccCCCCccEEEEEEEEECCCCCEEEEEeCCCCEEEeeEEEEEEEE
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999983
No 5
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=99.96 E-value=8.1e-30 Score=180.17 Aligned_cols=76 Identities=32% Similarity=0.564 Sum_probs=74.4
Q ss_pred eeeeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeecc
Q 034229 17 SKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAF 92 (100)
Q Consensus 17 s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~ 92 (100)
|.|+|+++++||+|++|+++|+||+|++++|+||||||+|++|++++||+||+++|.+|++++++|+|++++++|-
T Consensus 2 ~~t~~i~a~~lkkG~~i~~~g~p~~Vve~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~ve~~~ve~~~~q 77 (138)
T 1iz6_A 2 GDKTKVQVSKLKPGRYIIIDDEPCRIVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEVDVPIIDKKTAQ 77 (138)
T ss_dssp CCEEEEEGGGCCTTSEEEETTEEEEEEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETTSEEEEECCEEEEEE
T ss_pred CceEEEEHHHccCCCEEEECCEEEEEEEEEeecCCCCCceEEEEEEEECCCCCEEEEEecCCCEEeeceEEEEEEE
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999973
No 6
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=99.96 E-value=2.6e-29 Score=176.80 Aligned_cols=73 Identities=40% Similarity=0.702 Sum_probs=72.3
Q ss_pred eeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeec
Q 034229 19 TFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSA 91 (100)
Q Consensus 19 t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~ 91 (100)
|+|+++++||+|++|+++|+||+|+|++|+||||||+|+||++++||+||+++|.+|++++++|+|++++++|
T Consensus 6 t~~i~~~~lrkG~~i~~~g~p~~Vve~~~~KpGKgG~A~vr~k~knl~tG~~~e~tf~s~~kve~~~ve~~~~ 78 (136)
T 1bkb_A 6 TKYVEAGELKEGSYVVIDGEPCRVVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEVPIIEKFTA 78 (136)
T ss_dssp CEEEEGGGCCTTCEEEETTEEEEEEEEEEECCSTTSCCEEEEEEEETTTCCEEEEEEETTSEEEECCCEEEEE
T ss_pred EEEEEHHHccCCCEEEECCEEEEEEEEEEecCCCCCceEEEEEEEECCCCCeEEEEEcCCCEeeeceEEEEEE
Confidence 9999999999999999999999999999999999989999999999999999999999999999999999997
No 7
>2eif_A IF-5A, protein (eukaryotic translation initiation factor; EIF-5A, OB-fold, structural genomics, BSGC STRU funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=99.96 E-value=8.8e-29 Score=174.36 Aligned_cols=77 Identities=36% Similarity=0.601 Sum_probs=74.7
Q ss_pred ceeeeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeecc
Q 034229 16 ASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAF 92 (100)
Q Consensus 16 ~s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~ 92 (100)
.|.|+|+++++||+|++|+++|+||+|++++|+||||||+|++|++++||+||+++|.+|++++++|.|++++++|-
T Consensus 5 m~~t~~i~~~~lr~G~~I~~~g~p~~V~e~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~ve~~~ve~~~~q 81 (136)
T 2eif_A 5 MPGTKQVNVGSLKVGQYVMIDGVPCEIVDISVSKPGKHGGAKARVVGIGIFEKVKKEFVAPTSSKVEVPIIDRRKGQ 81 (136)
T ss_dssp CSSEEEEEGGGCCTTSEEEETTEEEEEEEEEECCCCSSSCCEEEEEEEESSSCCEEEEEEETTSEEEEECEEEEEEE
T ss_pred EEeeEEEEHHHCcCCCEEEECCEEEEEEEEEeecCCCCCceEEEEEEEEcCCCCeEEEEecCCCEeccccEeeeEEE
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999973
No 8
>3a5z_B EF-P, elongation factor P; aminoacyl-tRNA synthetase paralog, translation, tRNA, lysyl- synthetase, structural genomics, NPPSFA; HET: KAA; 2.50A {Escherichia coli}
Probab=99.93 E-value=5e-26 Score=168.35 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=69.7
Q ss_pred eeeeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeecc
Q 034229 17 SKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAF 92 (100)
Q Consensus 17 s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~ 92 (100)
|+-+||++++||+|++|++||+||+|+|++|+|||| |+|++|+++|||+||+++|.+|++++++|.|++++++|-
T Consensus 2 ~~m~~~~a~dlk~G~~I~~dg~p~~Vve~~~~KpGK-G~A~vr~klknl~TG~~~e~tf~s~~kve~~~ver~~~q 76 (191)
T 3a5z_B 2 SHMATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGK-GQAFARVKLRRLLTGTRVEKTFKSTDSAEGADVVDMNLT 76 (191)
T ss_dssp ----CEESTTCCTTCEEEETTEEEEEEEEEEECCTT-CCCEEEEEEEEGGGTEEEEEEEETTCEEEECCEEEECCE
T ss_pred CccceeeHHHCCCCCEEEECCEEEEEEEEEEEcCCC-CcEEEEEEEEECCCCCEEEEEECCCCEEEeeEEEEEEEE
Confidence 556789999999999999999999999999999999 999999999999999999999999999999999999983
No 9
>1ueb_A EF-P, TT0860, elongation factor P; beta barrel, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.65A {Thermus thermophilus} SCOP: b.34.5.2 b.40.4.5 b.40.4.5 PDB: 3huw_V 3huy_V
Probab=99.92 E-value=1.6e-25 Score=164.73 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=68.9
Q ss_pred EEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeecc
Q 034229 21 PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAF 92 (100)
Q Consensus 21 ~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~ 92 (100)
|+++++||+|++|+++|+||+|+|++|+|||| |+|++|+++|||+||+++|.+|+++|++|.|++++++|-
T Consensus 1 mi~a~dlkkG~~i~~dg~p~~Vve~~~~KpGK-G~A~vr~klknl~TG~~~e~tf~s~~kve~~~ver~~~q 71 (184)
T 1ueb_A 1 MISVTDLRPGTKVKMDGGLWECVEYQHQKLGR-GGAKVVAKFKNLETGATVERTFNSGEKLEDIYVETRELQ 71 (184)
T ss_dssp CEEGGGCCTTCEEEETTEEEEEEEEEEEEETT-SCCEEEEEEEESSSSCEEEEEEETTCEEEECCEEEEEEE
T ss_pred CcchhhcCCCCEEEECCEEEEEEEEEEeeCCC-CceEEEEEEEECCCCCEEEEEECCCCEEEeeeEEEEEEE
Confidence 37899999999999999999999999999999 999999999999999999999999999999999999984
No 10
>1yby_A Translation elongation factor P; conserved hypothetical protein, structural genomics, PSI, protein structure initiative; 1.95A {Clostridium thermocellum}
Probab=99.91 E-value=1e-24 Score=164.01 Aligned_cols=76 Identities=17% Similarity=0.177 Sum_probs=67.2
Q ss_pred ceeeeEEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeecc
Q 034229 16 ASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAF 92 (100)
Q Consensus 16 ~s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~ 92 (100)
.+...++++++||+|++|++||+||+|+|++|+|||| |+|++|+++|||+||+++|.+|++++++|.|++++++|-
T Consensus 26 ~~rg~Mi~a~dlKkG~~I~idG~p~~Vve~~hvKPGK-G~A~vr~klknl~TG~~~e~tf~s~ekve~a~verr~~Q 101 (215)
T 1yby_A 26 KKAGLMISAGDFKNGVTFELDGQIFQVIEFQHVKPGK-GAAFVRTKLKNIVTGATIEKTFNPTDKMPKAHIERKDMQ 101 (215)
T ss_dssp -----CEEGGGCCTTCEEEETTEEEEEEEEEEECCC---CCEEEEEEEETTTCCEEEEEECTTCEECBCCCEEEEEE
T ss_pred hhCCEEEEhhhccCCCEEEECCEEEEEEEEEEEcCCC-CceEEEEEEEECCCCCEEEEEECCCCEEecceEEEEEEE
Confidence 3344567999999999999999999999999999999 999999999999999999999999999999999999973
No 11
>3tre_A EF-P, elongation factor P; protein synthesis, translation; 2.90A {Coxiella burnetii}
Probab=99.91 E-value=2.1e-24 Score=159.58 Aligned_cols=70 Identities=19% Similarity=0.292 Sum_probs=68.8
Q ss_pred EEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeec
Q 034229 21 PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSA 91 (100)
Q Consensus 21 ~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~ 91 (100)
++++++||+|++|+++|+||+|++++|+|||| |+|++|+++|||+||+++|.+|+++|++|.|++++++|
T Consensus 6 m~~a~dlkkG~~I~~dG~p~~Vve~~~~KpGK-G~A~vr~klknl~tG~~~e~tf~s~ekve~~~ver~~~ 75 (191)
T 3tre_A 6 THSTNEFRGGLKVMVDGDPCSIIDNEFVKPGK-GQAFNRVKFRNLKTGRVLERTFKSGETLPAADVVEVEM 75 (191)
T ss_dssp CEEGGGCCTTCEEEETTEEEEEEEEEEECCSS-SCCEEEEEEEETTTCCEEEEEEETTCEECBCCEEEEEE
T ss_pred EEEHHHCCCCCEEEECCEEEEEEEEEEeeCCC-CceEEEEEEEECCCCCEEEEEeCCCCEEEeceEEEEEE
Confidence 58999999999999999999999999999999 99999999999999999999999999999999999998
No 12
>3oyy_A EF-P, elongation factor P; translation; 1.75A {Pseudomonas aeruginosa}
Probab=99.91 E-value=3.8e-24 Score=158.27 Aligned_cols=70 Identities=16% Similarity=0.245 Sum_probs=68.3
Q ss_pred EEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeec
Q 034229 21 PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSA 91 (100)
Q Consensus 21 ~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~ 91 (100)
++++++||+|++|+++|+||+|++++|+|||| |+|++|+++|||+||+++|.+|+++|++|.|++++++|
T Consensus 4 m~~a~dlk~G~~I~~dg~p~~Vve~~~~KpGK-G~A~vr~klknl~tG~~~e~tf~s~ekve~~~ver~~~ 73 (191)
T 3oyy_A 4 MKTAQEFRAGQVANINGAPWVIQKAEFNKSGR-NAAVVKMKLKNLLTGAGTETVFKADDKLEPIILDRKEV 73 (191)
T ss_dssp CEEGGGCCTTCEEEETTEEEEEEEEEEECCTT-SCCEEEEEEEETTTCCEEEEEEETTCEEEECCCEEEEE
T ss_pred cccHHhCCCCCEEEECCEEEEEEEEEeeeCCC-CcEEEEEEEEECCCCCEEEEEeCCCCEEEeeeEEEEEE
Confidence 57899999999999999999999999999999 77999999999999999999999999999999999998
No 13
>1khi_A HEX1; membrane sealing, peroxisomal target, structural protein; 1.78A {Neurospora crassa} SCOP: b.34.5.2 b.40.4.5
Probab=99.89 E-value=2.4e-23 Score=152.77 Aligned_cols=72 Identities=29% Similarity=0.543 Sum_probs=67.7
Q ss_pred cccCCceeeeEEeccccccceEEEEcCeeEEEEEeeee-cCCCCcccEEEEEEeEccCCcEEEEEEcCC--------CcE
Q 034229 11 KADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTS-KTGKHGHAKCHFVGIDIFNGKKLEDIVPSS--------HNC 81 (100)
Q Consensus 11 ~~~~~~s~t~~i~~~~LkkG~~I~i~g~Pc~Vve~~~~-KpGKhG~A~vr~k~knL~TG~~~E~t~~s~--------~~v 81 (100)
+++|++|.|+|++|++||+|.||+|+|+||+|++++++ ||||| |+.+.|||||+++|+.+|++ +++
T Consensus 24 ~~~~gas~T~p~q~~~LrkG~yv~IkGrPCKIveiStS~KtGKH-----~ivaiDIFTgkK~edi~Pss~p~p~~~~hnm 98 (176)
T 1khi_A 24 TGTGSASQTVTIPCHHIRLGDILILQGRPCQVIRISTSAATGQH-----RYLGVDLFTKQLHEESSFVSNPAPSVVVQTM 98 (176)
T ss_dssp ---CCSCCEEEEEGGGCCTTCEEEETTEEEEEEEEEECTTTCCE-----EEEEEETTTCCEEEEECCEECSSTTCCEEEE
T ss_pred CCCCCCCccEEEEhhheeeCCEEEECCeeeEEEEEEccCCCCce-----EEEEEEccCCcEeEEeccccCCCccccccee
Confidence 68999999999999999999999999999999999999 89999 89999999999999999999 899
Q ss_pred EeeEEE
Q 034229 82 DVLIYA 87 (100)
Q Consensus 82 e~~~le 87 (100)
++|+++
T Consensus 99 ~VPvVk 104 (176)
T 1khi_A 99 LGPVFK 104 (176)
T ss_dssp EEECCE
T ss_pred ccceeE
Confidence 999996
No 14
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=74.25 E-value=7.4 Score=28.33 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=44.5
Q ss_pred EeccccccceEEEEcCee-EEEEEeeee-cCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeeccc
Q 034229 22 QQAGTIRKNGYIVIKGRP-CKVVEVSTS-KTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAFN 93 (100)
Q Consensus 22 i~~~~LkkG~~I~i~g~P-c~Vve~~~~-KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~~ 93 (100)
++++++..-..|.+.|.| +.++.+... |+|-+|++.+. +|+++=...-++-..-.+-.-.|++||
T Consensus 116 ~~vG~v~~~g~inlsg~~t~r~l~Y~~pTk~G~CGgvL~~-------~gkIiGIHvgGnG~~Gfaa~L~r~yf~ 182 (191)
T 3q3y_A 116 IPVGQVTDYGFLNLGGTPTKRMLVYNFPTRAGQCGGVLMS-------TGKVLGIHVGGNGHQGFSAALLRHYFN 182 (191)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEESCCCTTCTTCEEEE-------TTEEEEEEEEEETTEEEEEECCGGGCC
T ss_pred EEeccEEEcceEeCCCCcccCEEEecCCCCCCccCCEEEe-------CCCEEEEEECCCCcceEEeehhHhhhC
Confidence 455555553445677665 667777665 88999998764 788887777766666666666777776
No 15
>1ed7_A Chitinase A1, (CHBD-CHIA1); twisted beta-sandwich, hydrolase; NMR {Bacillus circulans} SCOP: b.72.2.1
Probab=62.24 E-value=2.4 Score=23.62 Aligned_cols=26 Identities=19% Similarity=0.326 Sum_probs=21.2
Q ss_pred ccccceEEEEcCeeEEEEEeeeecCC
Q 034229 26 TIRKNGYIVIKGRPCKVVEVSTSKTG 51 (100)
Q Consensus 26 ~LkkG~~I~i~g~Pc~Vve~~~~KpG 51 (100)
.-+.|+.|.++|..|+++...++.||
T Consensus 7 ~Y~~Gd~Vty~G~~Y~c~q~hts~~~ 32 (45)
T 1ed7_A 7 AYTAGQLVTYNGKTYKCLQPHTSLAG 32 (45)
T ss_dssp EECTTCCEEETTEEECBCSCEEECTT
T ss_pred eEcCCCEEEECCeEEEEEecCcCcCC
Confidence 45789999999999999987777543
No 16
>1k0h_A Gpfii; twisted beta-sandwich, viral protein; NMR {Enterobacteria phage lambda} SCOP: b.106.1.2 PDB: 2kx4_A
Probab=59.89 E-value=2.2 Score=28.56 Aligned_cols=34 Identities=12% Similarity=0.141 Sum_probs=26.3
Q ss_pred eccccccceEEEEcCeeEEEEEeeeecCCCCcccEEE
Q 034229 23 QAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCH 59 (100)
Q Consensus 23 ~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr 59 (100)
++..++.|+.|.++|+.|.|.+ ..|.-||.+.+.
T Consensus 71 D~~~~~~gD~v~i~g~~y~V~~---v~PDg~G~~~L~ 104 (117)
T 1k0h_A 71 EVRQLRRGDTLTIGEENFWVDR---VSPDDGGSCHLW 104 (117)
T ss_dssp STTTCCSSCEEEETTTCEEBCC---CCSSSCCCTTCB
T ss_pred ccCCCCCCCEEEECCeEEEEee---eccCCCCeEEEE
Confidence 4567899999999999999986 457555766543
No 17
>3qx1_A FAS-associated factor 1; UBX, protein binding, P97 binding; 1.60A {Homo sapiens} PDB: 3qwz_B* 3qc8_B 3qca_A 3qq8_B 3r3m_B 1h8c_A
Probab=58.96 E-value=12 Score=22.62 Aligned_cols=30 Identities=17% Similarity=0.045 Sum_probs=22.8
Q ss_pred CCcccEEEEEEeEccCCcEEEEEEcCCCcEE
Q 034229 52 KHGHAKCHFVGIDIFNGKKLEDIVPSSHNCD 82 (100)
Q Consensus 52 KhG~A~vr~k~knL~TG~~~E~t~~s~~~ve 82 (100)
-|+...+++.+| +-+|+....+|++++++.
T Consensus 2 ~~~~~~~~i~iR-lpdG~r~~~~F~~~~tl~ 31 (84)
T 3qx1_A 2 SHMEPVSKLRIR-TPSGEFLERRFLASNKLQ 31 (84)
T ss_dssp --CCCEEEEEEE-CTTSCEEEEEEETTSBHH
T ss_pred CCCCCeEEEEEE-CCCCCEEEEEeCCCCCHH
Confidence 355566777666 678999999999999875
No 18
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=57.20 E-value=15 Score=24.70 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=23.1
Q ss_pred eeEEeccccccceEEEE-cC-----eeEEEEEeeee
Q 034229 19 TFPQQAGTIRKNGYIVI-KG-----RPCKVVEVSTS 48 (100)
Q Consensus 19 t~~i~~~~LkkG~~I~i-~g-----~Pc~Vve~~~~ 48 (100)
...+.+++|++|+.|.. +| +|-+|++++..
T Consensus 84 ~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~ 119 (145)
T 1at0_A 84 LTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSV 119 (145)
T ss_dssp EEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEE
T ss_pred EEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEE
Confidence 46789999999998865 44 47888877654
No 19
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=57.03 E-value=24 Score=24.87 Aligned_cols=41 Identities=10% Similarity=-0.009 Sum_probs=30.0
Q ss_pred EeccccccceEEEEcCe---eEEEEEeeeecC--------CCCcccEEEEEE
Q 034229 22 QQAGTIRKNGYIVIKGR---PCKVVEVSTSKT--------GKHGHAKCHFVG 62 (100)
Q Consensus 22 i~~~~LkkG~~I~i~g~---Pc~Vve~~~~Kp--------GKhG~A~vr~k~ 62 (100)
+..=+||+|+.|.+++- ||.|+.+.+.-+ --+|++.|.++-
T Consensus 59 vk~LeLRiGD~VKVd~vpK~~hiVvGf~~~l~~~~~~~~TDi~Gh~tViL~~ 110 (153)
T 2fhd_A 59 IKRFFLKKGDVVQSTRLGKIKHTVVKTFRSTNEQLSLIAVDALNNDMVILAH 110 (153)
T ss_dssp EEESCCCTTCEEEETTSTTCCEEEEEEECCCSSCCCGGGCCTTCCCEEEEEE
T ss_pred ceeeeeecCCEEEECCCCCccEEEEEecccccccccceeeeecCceEEEEcc
Confidence 44568999999999965 699998874322 345888877654
No 20
>2f9h_A PTS system, IIA component; alpha-beta structure, beta-barrel, dimer, structural genomic protein structure initiative; 1.57A {Enterococcus faecalis} SCOP: b.161.1.1
Probab=56.70 E-value=10 Score=25.80 Aligned_cols=21 Identities=14% Similarity=0.180 Sum_probs=18.9
Q ss_pred cccccceEEEEcCeeEEEEEe
Q 034229 25 GTIRKNGYIVIKGRPCKVVEV 45 (100)
Q Consensus 25 ~~LkkG~~I~i~g~Pc~Vve~ 45 (100)
.+|++|+.+.++++-|+|..+
T Consensus 53 ~~i~~Gd~l~i~~~~Y~ItaV 73 (129)
T 2f9h_A 53 VTLAEGDHLKIGDTNYTITKV 73 (129)
T ss_dssp CCCCTTCEEEETTEEEEEEEE
T ss_pred CCcCCCCEEEECCEEEEEEEE
Confidence 589999999999999999754
No 21
>3r8s_P 50S ribosomal protein L19; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_N 1p86_N 2awb_P 2gya_N 2gyc_N 2aw4_P 2i2v_P 2j28_P 2i2t_P* 2qao_P* 2qba_P* 2qbc_P* 2qbe_P 2qbg_P 2qbi_P* 2qbk_P* 2qov_P 2qox_P 2qoz_P* 2qp1_P* ...
Probab=47.05 E-value=61 Score=21.62 Aligned_cols=65 Identities=15% Similarity=0.243 Sum_probs=40.5
Q ss_pred EeccccccceEEEE-----cCeeEEEEEeeeec---CCCCcccEEEEEEeEccCCcEEEEEEcCCC-cEEeeEEEE
Q 034229 22 QQAGTIRKNGYIVI-----KGRPCKVVEVSTSK---TGKHGHAKCHFVGIDIFNGKKLEDIVPSSH-NCDVLIYAS 88 (100)
Q Consensus 22 i~~~~LkkG~~I~i-----~g~Pc~Vve~~~~K---pGKhG~A~vr~k~knL~TG~~~E~t~~s~~-~ve~~~le~ 88 (100)
.+..++++|+.|.+ +|....+.-++-.- -|+ | .--.+.++++..|.-.|.+||-.. .++.+.+-+
T Consensus 14 ~~iP~f~~GDtv~V~~~i~EG~keRiQ~F~GvvI~~~~~-G-~~~tftvRki~~gvGVEr~fpl~SP~I~~IeV~r 87 (114)
T 3r8s_P 14 QDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNR-G-LHSAFTVRKISNGEGVERVFQTHSPVVDSISVKR 87 (114)
T ss_dssp SCCCCCCTTCEEEEEEEEEETTEEEEEEEEEEEEEEECC-G-GGCEEEEEEEETTEEEEEEEETTCTTEEEEEEEE
T ss_pred cCCCccCCCCEEEEEEEEecCCceeeeeEEEEEEEEECC-C-CCeEEEEEEecCCccEEEEEecCCCccceEEEEE
Confidence 35668999998765 46655554333221 133 3 223477999999999999998653 344444433
No 22
>3v2d_T 50S ribosomal protein L19; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_S 2hgj_S 2hgu_S 2j03_T 2jl6_T 2jl8_T 2v47_T 2v49_T 2wdi_T 2wdj_T 2wdl_T 2wdn_T 2wh2_T 2wh4_T 2wrj_T 2wrl_T 2wro_T 2wrr_T 2x9s_T 2x9u_T ...
Probab=46.89 E-value=71 Score=22.28 Aligned_cols=64 Identities=13% Similarity=0.176 Sum_probs=39.4
Q ss_pred eccccccceEEEE-----cCeeEEEEEeeee---cCCCCcccEEEEEEeEccCCcEEEEEEcCCC-cEEeeEEEE
Q 034229 23 QAGTIRKNGYIVI-----KGRPCKVVEVSTS---KTGKHGHAKCHFVGIDIFNGKKLEDIVPSSH-NCDVLIYAS 88 (100)
Q Consensus 23 ~~~~LkkG~~I~i-----~g~Pc~Vve~~~~---KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~-~ve~~~le~ 88 (100)
+..++++|+.|.+ +|....+.-++-. .-|+ |- --.+.++++..|.-.|.+||-.. .++.+.+-+
T Consensus 18 diP~F~~GDtV~V~~~i~EG~keRiQ~FeGvVI~rr~~-Gl-~~tFtVRkis~gvGVEr~Fpl~SP~I~~IeVvr 90 (146)
T 3v2d_T 18 DLPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVIRIRRN-GF-NTTFTVRKVSYGVGVERIFPLHSPLIQKIDIVQ 90 (146)
T ss_dssp CCCCCCTTCEEEEEEEEECSSCEEEEEEEEEEEEEECC-GG-GCEEEEEEEETTEEEEEEEETTCTTEEEEEEEE
T ss_pred cCCCcCCCCEEEEEEEEccCCceeeeeEEEEEEEEECC-CC-CeEEEEEEecCCccEEEEEecCCCccceEEEEe
Confidence 4568999998764 5655444333322 1133 32 22477999999999999998653 344444443
No 23
>2ftc_B Mitochondrial ribosomal protein L2; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_B
Probab=44.56 E-value=72 Score=21.71 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=21.8
Q ss_pred ecCCCCcc------cEEEEEEeEccCCcEEEEEEcCCCcEEe
Q 034229 48 SKTGKHGH------AKCHFVGIDIFNGKKLEDIVPSSHNCDV 83 (100)
Q Consensus 48 ~KpGKhG~------A~vr~k~knL~TG~~~E~t~~s~~~ve~ 83 (100)
.+||++|+ +.+++..+ .++..--..||++.-.+
T Consensus 73 ~~pG~gg~laRsAGt~a~ii~k---e~~~~~vrLPSGe~r~v 111 (136)
T 2ftc_B 73 SEPGRGAQYIRAAGTCGVLLRK---VNGTAIIQLPSKRQMQV 111 (136)
T ss_pred ccCCCCcEEEEeCCCeEEEEEe---cCCEEEEECCCCCeEEE
Confidence 48998432 45556666 46777788888876554
No 24
>2z14_A EF-hand domain-containing family member C2; DUF1126, human EF-hand domain, alternative splicing, polymorphism, signaling protein; 1.68A {Homo sapiens} PDB: 2z13_A
Probab=44.04 E-value=21 Score=24.15 Aligned_cols=25 Identities=16% Similarity=0.198 Sum_probs=22.8
Q ss_pred EeccccccceEEEEcCeeEEEEEee
Q 034229 22 QQAGTIRKNGYIVIKGRPCKVVEVS 46 (100)
Q Consensus 22 i~~~~LkkG~~I~i~g~Pc~Vve~~ 46 (100)
....||..|..|.+-|+.+.|++..
T Consensus 84 ~~~~Dl~VG~~v~i~gR~f~I~dcD 108 (133)
T 2z14_A 84 YTVYHFNVGTEVVFYGRTFKIYDCD 108 (133)
T ss_dssp CCGGGCCTTCEEEETTEEEEEEEEC
T ss_pred cCHHHcccCCEEEEecEEEEEEeCC
Confidence 5788999999999999999999864
No 25
>2zjr_M 50S ribosomal protein L19; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.34.5.6 PDB: 1nwx_N* 1nwy_N* 1sm1_N* 1xbp_N* 2zjp_M* 2zjq_M 1nkw_N 3cf5_M* 3dll_M* 3pio_M* 3pip_M* 1pnu_N 1pny_N 1vor_Q 1vou_Q 1vow_Q 1voy_Q 1vp0_Q
Probab=41.94 E-value=62 Score=23.01 Aligned_cols=64 Identities=16% Similarity=0.227 Sum_probs=39.6
Q ss_pred eccccccceEEEE-----cCeeEEEEEeeee---cCCCCcccEEEEEEeEccCCcEEEEEEcCCC-cEEeeEEEE
Q 034229 23 QAGTIRKNGYIVI-----KGRPCKVVEVSTS---KTGKHGHAKCHFVGIDIFNGKKLEDIVPSSH-NCDVLIYAS 88 (100)
Q Consensus 23 ~~~~LkkG~~I~i-----~g~Pc~Vve~~~~---KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~-~ve~~~le~ 88 (100)
+..++++|+.|.+ +|....+.-++-. +-|+ |- --.+.++++..|.-.|.+||-.. .++.+.+-+
T Consensus 23 diP~Fr~GDtV~V~vkI~EG~KeRiQ~FeGVVIarr~~-Gl-~sTFTVRkis~GvGVER~FplhSP~I~kIEVvr 95 (166)
T 2zjr_M 23 QLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGS-GS-RKSFTVRKISFGEGVERVFPFASPLVNQVTIVE 95 (166)
T ss_dssp CCCCCSSSEEEEEECCTTSSSCCCCEEEECCEEECCCC-GG-GCEEEEEEEETTEEEEEEEETTCTTEEEEEEEE
T ss_pred CCCCcCCCCEEEEEEEEecCCeeeecceEEEEEEEeCC-CC-CcEEEEEEecCCeeEEEEEecCCCccceEEEEe
Confidence 4568999999876 3553333322222 2233 32 23588999999999999998653 344444433
No 26
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=40.93 E-value=38 Score=27.23 Aligned_cols=52 Identities=8% Similarity=-0.043 Sum_probs=38.6
Q ss_pred ccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEE
Q 034229 28 RKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYA 87 (100)
Q Consensus 28 kkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le 87 (100)
..|+.+.+||.++-.+. .||+ .+|+.+.|.-..+.+...+..++++.++-.+
T Consensus 181 ~~gd~~lvNG~~~p~~~----v~g~----~~RlRliNas~~~~~~l~i~dg~~~~vIa~D 232 (488)
T 3od3_A 181 WFGDTLLTNGAIYPQHA----APRG----WLRLRLLNGCNARSLNFATSDNRPLYVIASD 232 (488)
T ss_dssp CCCSEEEETTBSSCEEE----EEEE----EEEEEEEECCSSCCEEEEETTCCCEEEEEET
T ss_pred CCCCEEEEcCCcCccEe----cCCC----EEEEEEEccCCCceeeeeecCCCeEEEEEeC
Confidence 35889999999765443 2454 7999999998888888888767777665443
No 27
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=40.83 E-value=97 Score=22.14 Aligned_cols=54 Identities=17% Similarity=0.200 Sum_probs=35.6
Q ss_pred EEEcCee-EEEEEeee-ecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeeccc
Q 034229 33 IVIKGRP-CKVVEVST-SKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAFN 93 (100)
Q Consensus 33 I~i~g~P-c~Vve~~~-~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~~ 93 (100)
+.+.|.| +.++.+.. +|+|-+|++.+. +|+++=...-++-.+-.+-.-.|++|.
T Consensus 129 inlsg~~t~r~l~Y~~pTk~G~CGgvl~~-------~gkIiGIHvaGnG~~G~~a~L~r~yf~ 184 (187)
T 3qzr_A 129 LNLSGKPTHRTMMYNFPTKAGQCGGVVTS-------VGKIIGIHIGGNGRQGFCAGLKRSYFA 184 (187)
T ss_dssp EEETTEEEEEEEEESSCCCTTCTTCEEEE-------TTEEEEEEEEECSSCEEEEECCGGGGC
T ss_pred EeCCCCccccEEEECCCCCCCccCCeEEe-------cCcEEEEEECCCCCcEEEEEeehhhhh
Confidence 3455554 55677776 688999998865 788887777665555555445555553
No 28
>2exd_A NFED short homolog; membrane protein; NMR {Pyrococcus horikoshii} SCOP: b.40.12.1
Probab=40.23 E-value=37 Score=20.82 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=25.3
Q ss_pred cccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeE
Q 034229 25 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGID 64 (100)
Q Consensus 25 ~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~kn 64 (100)
.+|.+...|.++|+.|.+..-+...+|. .|++..++
T Consensus 25 ~~i~~~G~V~i~Ge~W~A~s~~~i~~G~----~V~Vv~ve 60 (80)
T 2exd_A 25 KIAEDHYLVEVEGDKWIAYSDEKLSLGD----RVMVVDVD 60 (80)
T ss_dssp ECCTTCEEEEETTEEEEECCSSCCCTTC----EEEEEEEC
T ss_pred EecCCCEEEEECCEEEEEEECCccCCCC----EEEEEEEE
Confidence 3566677899999999987545556665 66665543
No 29
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=38.18 E-value=1.1e+02 Score=21.93 Aligned_cols=64 Identities=19% Similarity=0.305 Sum_probs=41.2
Q ss_pred EeccccccceEEEEcCee-EEEEEeee-ecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEeeEEEEeecc
Q 034229 22 QQAGTIRKNGYIVIKGRP-CKVVEVST-SKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVLIYASLSAF 92 (100)
Q Consensus 22 i~~~~LkkG~~I~i~g~P-c~Vve~~~-~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~~le~~~~~ 92 (100)
+.+++++.-..+.++|.| +.++.+.. +++|.+|++.+. +|+++=...-+.-..-.+-.-.|++|
T Consensus 121 ~~vg~v~~~g~i~lsg~~t~r~l~Y~~pT~~G~CGg~l~~-------~gkIlGIHvaG~G~~G~aa~L~r~yF 186 (190)
T 4dcd_A 121 VPVGAVTEQGYLNLGGRQTARTLMYNFPTRAGQCGGVITC-------TGKVIGMHVGGNGSHGFAAALKRSYF 186 (190)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEESSCCCTTCTTCEEEE-------TTEEEEEEEEECSSCEEEEECCGGGG
T ss_pred EEeeeeEEeccccCCCCcccceEEEccCCCCCccCCEEEe-------CCCEEEEEECCCCCceEeeehhHhhh
Confidence 445555555566777776 56777776 688999988763 67776666655544444444455554
No 30
>1rl2_A Protein (ribosomal protein L2); RNA-binding domain, peptidyltransferease center, X-RAY diffraction; 2.30A {Geobacillus stearothermophilus} SCOP: b.34.5.3 b.40.4.5 PDB: 1c04_A 487d_I
Probab=36.48 E-value=62 Score=22.06 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=38.5
Q ss_pred eeeEEeccccccceEEEEc--------------Cee--EEEEEeeeecCCCCcc------cEEEEEEeEccCCcEEEEEE
Q 034229 18 KTFPQQAGTIRKNGYIVIK--------------GRP--CKVVEVSTSKTGKHGH------AKCHFVGIDIFNGKKLEDIV 75 (100)
Q Consensus 18 ~t~~i~~~~LkkG~~I~i~--------------g~P--c~Vve~~~~KpGKhG~------A~vr~k~knL~TG~~~E~t~ 75 (100)
..|.+....|+.|+.|.-. .-| ..|-.++ .+||++|+ +.+++..++ |+..--.+
T Consensus 41 k~yIlAp~gl~~Gd~I~~g~~a~i~~GN~lpL~~iP~Gt~IhNIE-~~pG~gg~laRsAGt~a~ii~ke---~~~~~vrL 116 (137)
T 1rl2_A 41 KRYIIAPKNLKVGMEIMSGPDADIKIGNALPLENIPVGTLVHNIE-LKPGRGGQLVRAAGTSAQVLGKE---GKYVIVRL 116 (137)
T ss_dssp EEEEECCTTCCTTCEECBSTTCCSCTTCEEEGGGSCTTCEEESEE-SSTTSCEEESSSSSCCEEEEEEE---TTEEEEEC
T ss_pred EEEEEecccCccceEEEECCccccccCCEeehhhCCCCCEEEEEE-ccCCCCcEEEEeCCCeEEEEEEc---CCEEEEEC
Confidence 5677777777777776532 222 1222223 58898542 566777774 77777888
Q ss_pred cCCCcEEe
Q 034229 76 PSSHNCDV 83 (100)
Q Consensus 76 ~s~~~ve~ 83 (100)
||++.-.+
T Consensus 117 PSGe~r~v 124 (137)
T 1rl2_A 117 ASGEVRMI 124 (137)
T ss_dssp TTSCEEEE
T ss_pred CCCCeEEE
Confidence 99876543
No 31
>1o6a_A Putative flagellar motor switch protein FLIN; C- terminal PR fragment, structural genomics, joint center for structural JCSG; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A
Probab=33.92 E-value=50 Score=20.70 Aligned_cols=20 Identities=15% Similarity=0.360 Sum_probs=16.0
Q ss_pred eccccccceEEEEc---CeeEEE
Q 034229 23 QAGTIRKNGYIVIK---GRPCKV 42 (100)
Q Consensus 23 ~~~~LkkG~~I~i~---g~Pc~V 42 (100)
+.-+|++|++|.++ ++|..|
T Consensus 36 ell~L~~GdVI~Ld~~~~~~v~v 58 (96)
T 1o6a_A 36 RVLEMIHGSIIELDKLTGEPVDI 58 (96)
T ss_dssp HHHHCCTTCEEEEEEETTCCEEE
T ss_pred HHhCCCCCCEEEeCCCCCCcEEE
Confidence 45689999999998 567666
No 32
>1p9k_A ORF, hypothetical protein; alfal motif, RNA-binding protein, E.coli, montreal-kingston structural genomics initiative, BSGI; NMR {Escherichia coli} SCOP: d.66.1.6
Probab=33.86 E-value=38 Score=20.06 Aligned_cols=18 Identities=22% Similarity=0.331 Sum_probs=15.3
Q ss_pred ccccceEEEEcCeeEEEE
Q 034229 26 TIRKNGYIVIKGRPCKVV 43 (100)
Q Consensus 26 ~LkkG~~I~i~g~Pc~Vv 43 (100)
.++.|+.|.++|+|+.|.
T Consensus 61 ~v~~gd~I~v~~~~~~~~ 78 (79)
T 1p9k_A 61 KIVAGQTVSFAGHSVQVV 78 (79)
T ss_dssp CCCSSEEEEETTEEEEEE
T ss_pred CCCCCCEEEECCEEEEEe
Confidence 578899999999998765
No 33
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=33.02 E-value=69 Score=21.91 Aligned_cols=17 Identities=6% Similarity=0.278 Sum_probs=14.5
Q ss_pred eEEeccccccceEEEEc
Q 034229 20 FPQQAGTIRKNGYIVIK 36 (100)
Q Consensus 20 ~~i~~~~LkkG~~I~i~ 36 (100)
..+.+++|++|++|.+-
T Consensus 104 ~~~~A~eLk~GD~v~v~ 120 (185)
T 2lcj_A 104 IEKRAFEVKEGDKVLVS 120 (185)
T ss_dssp EEEEGGGCCTTCEEEEC
T ss_pred EEEEHHHCCCCCEEEEc
Confidence 36789999999999874
No 34
>3rby_A Uncharacterized protein YLR301W; beta-barrel, unknown function; HET: PGE; 2.30A {Saccharomyces cerevisiae}
Probab=31.19 E-value=36 Score=25.56 Aligned_cols=27 Identities=22% Similarity=0.386 Sum_probs=23.1
Q ss_pred eEEeccccccceEEEEcCeeEEEEEee
Q 034229 20 FPQQAGTIRKNGYIVIKGRPCKVVEVS 46 (100)
Q Consensus 20 ~~i~~~~LkkG~~I~i~g~Pc~Vve~~ 46 (100)
.|.....+++|+.|.++|..|+|+|..
T Consensus 218 fP~~~~~l~~g~~v~v~g~~W~viE~~ 244 (245)
T 3rby_A 218 IPQSYENLKKGSTVTSNGLNWEVIEYH 244 (245)
T ss_dssp SCCCCTTCCTTCEEEETTEEEEEEEEE
T ss_pred CCccccccccCCEEEECCeEEEEEEec
Confidence 555567799999999999999999864
No 35
>3gs9_A Protein GP18; NP_465809.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MLY MSE; 1.70A {Listeria monocytogenes egd-e}
Probab=30.91 E-value=88 Score=23.70 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=30.7
Q ss_pred ccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccC
Q 034229 26 TIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFN 67 (100)
Q Consensus 26 ~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~T 67 (100)
-|.++..|.++|+.|.|..++...-| |...+.+.+..++-
T Consensus 55 ~l~~e~~I~~~~q~YvI~~~~~~~~g--~~~~~~V~A~hi~~ 94 (342)
T 3gs9_A 55 FLDYESSVYFRGQEFVVKQLSHDAVG--KTLSKDIRAPHIYY 94 (342)
T ss_dssp CSSTTCEEEETTEEEECCEECCBC-----CEEEEEEEEBGGG
T ss_pred hhCcCCEEEECCcEEEEEEeEeecCC--CEEEEEEEEEEeee
Confidence 49999999999999999988877655 34667788887763
No 36
>1giy_D 50S ribosomal protein L2; ribosome assembly, protein synthesis, LIFE; 5.50A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1ml5_d* 1yl3_D 2b66_D 2b9n_D 2b9p_D
Probab=29.61 E-value=1.1e+02 Score=21.71 Aligned_cols=62 Identities=18% Similarity=0.224 Sum_probs=37.9
Q ss_pred eeeEEeccccccceEEEEcCe--------------e--EEEEEeeeecCCCCcc------cEEEEEEeEccCCcEEEEEE
Q 034229 18 KTFPQQAGTIRKNGYIVIKGR--------------P--CKVVEVSTSKTGKHGH------AKCHFVGIDIFNGKKLEDIV 75 (100)
Q Consensus 18 ~t~~i~~~~LkkG~~I~i~g~--------------P--c~Vve~~~~KpGKhG~------A~vr~k~knL~TG~~~E~t~ 75 (100)
..|.+....|+.|+.|.-..+ | ..|-.++ .+||++|+ +.+++..+ .++..-..+
T Consensus 41 ~~yilAp~gl~~Gd~I~~g~~a~i~~GN~lpL~~iP~Gt~I~NIE-~~pG~gg~laRsAGt~a~ii~k---e~~~~~vrL 116 (178)
T 1giy_D 41 KRYIIAPKNLKVGMEIMSGPDADIKIGNALPLENIPVGTLVHNIE-LKPGRGGQLVRAAGTSAQVLGK---EGKYVIVRL 116 (178)
T ss_pred EEEEECccCCccccEEEECCCCccccCCCcccccCCCCCEEEeEe-ccCCCCeEEEEeCCCeEEEEEe---cCCeEEEEC
Confidence 567787888888888764321 1 1222333 57898432 45555665 466777888
Q ss_pred cCCCcEEe
Q 034229 76 PSSHNCDV 83 (100)
Q Consensus 76 ~s~~~ve~ 83 (100)
||++.-.+
T Consensus 117 PSGe~r~v 124 (178)
T 1giy_D 117 ASGEVRMI 124 (178)
T ss_pred CCCCEEEE
Confidence 88876543
No 37
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=27.39 E-value=1.5e+02 Score=20.54 Aligned_cols=40 Identities=10% Similarity=0.166 Sum_probs=27.7
Q ss_pred cccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEE
Q 034229 27 IRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKL 71 (100)
Q Consensus 27 LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~ 71 (100)
=+.|..++++++-|++++.- |+++.+.| .++++..+|+.+
T Consensus 18 ~~~g~~~~i~~~~y~~~~~l----g~G~~g~V-~~~~~~~~~~~v 57 (317)
T 2buj_A 18 YFQGHMVIIDNKHYLFIQKL----GEGGFSYV-DLVEGLHDGHFY 57 (317)
T ss_dssp SEEEEEEEETTEEEEEEEEE----EC--CEEE-EEEEETTTCCEE
T ss_pred eecccEEEECCeEEEEEEEe----cCCCCeEE-EEEEecCCCcEE
Confidence 35678889999999998765 55333444 677888888754
No 38
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=27.31 E-value=91 Score=19.08 Aligned_cols=30 Identities=7% Similarity=0.074 Sum_probs=22.5
Q ss_pred eccccccceEEEE-----cCeeEEEEEeeeecCCC
Q 034229 23 QAGTIRKNGYIVI-----KGRPCKVVEVSTSKTGK 52 (100)
Q Consensus 23 ~~~~LkkG~~I~i-----~g~Pc~Vve~~~~KpGK 52 (100)
....|+.|+.|.+ +|.-|.|++++...|.+
T Consensus 44 ~l~~lk~Gd~V~F~~~~~~~g~~~it~i~~~~~~~ 78 (82)
T 2l55_A 44 LPQGLKAGDRVAFSFRLDPHGMATLVTVAPQVQTA 78 (82)
T ss_dssp CCSSCSTTCEEEEEEEEETTTEEEEEEEEECCSSC
T ss_pred HhhcCCCCCEEEEEEEECCCCeEEEEEEEecCCCC
Confidence 3678999998875 33268999998877765
No 39
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=27.17 E-value=75 Score=20.92 Aligned_cols=35 Identities=20% Similarity=0.410 Sum_probs=24.2
Q ss_pred CCceeeeEEecccc--ccceEEEEcCeeEEEEEeeee
Q 034229 14 AGASKTFPQQAGTI--RKNGYIVIKGRPCKVVEVSTS 48 (100)
Q Consensus 14 ~~~s~t~~i~~~~L--kkG~~I~i~g~Pc~Vve~~~~ 48 (100)
+|...|..+=.+.- |.|+.|+++|+-|.|..+++.
T Consensus 49 sG~~rsLvvFSsgYrP~r~D~Vv~~Gk~y~Vtr~~~~ 85 (102)
T 2pp6_A 49 EGNGKNVVVFSGNVIPRRGDRVVLRGSEFTVTRIRRF 85 (102)
T ss_dssp ---CEEEEECCSSCCCCTTCEEEETTEEEEEEEEEEE
T ss_pred cCCceEEEEecCCcccCCCCEEEEcCcEEEEEEEEEE
Confidence 34445555544444 568999999999999988865
No 40
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=25.77 E-value=60 Score=20.29 Aligned_cols=36 Identities=17% Similarity=0.256 Sum_probs=22.4
Q ss_pred cccCCceeeeEE-eccccccceEEEEcC-----eeEEEEEee
Q 034229 11 KADAGASKTFPQ-QAGTIRKNGYIVIKG-----RPCKVVEVS 46 (100)
Q Consensus 11 ~~~~~~s~t~~i-~~~~LkkG~~I~i~g-----~Pc~Vve~~ 46 (100)
+|.++.+.+-+. ..+.+++|+.|+--+ -+|+|+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~F~vGmkLEA~D~~~~~~~a~i~~v~ 44 (88)
T 2eqm_A 3 SGSSGMSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKID 44 (88)
T ss_dssp CCCCSCTTSCCSCSSCCCCSSCEEEEECTTSCEEEEEEEEEE
T ss_pred CCcCCcccCCCCCCcCcCCCCCEEEEEcCCCCeeEEEEEEEe
Confidence 344444555554 468899999996544 356666555
No 41
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=24.41 E-value=52 Score=22.07 Aligned_cols=20 Identities=25% Similarity=0.391 Sum_probs=16.9
Q ss_pred ccccceEEEEcCeeEEEEEe
Q 034229 26 TIRKNGYIVIKGRPCKVVEV 45 (100)
Q Consensus 26 ~LkkG~~I~i~g~Pc~Vve~ 45 (100)
++++|+.+.+.+.|+.|+++
T Consensus 103 ~~~~G~~~~~~~~~~~V~~v 122 (151)
T 1ix5_A 103 EPEEGMVILAEGIPATITEV 122 (151)
T ss_dssp CCCTTEEEESSSCEEEEEEE
T ss_pred cccccCEEEECCeEEEEEEE
Confidence 57789999999999988764
No 42
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=23.76 E-value=1.2e+02 Score=18.45 Aligned_cols=63 Identities=14% Similarity=0.047 Sum_probs=34.2
Q ss_pred ceEEEEcCeeEEEEEeeeecCCC------CcccEEEEEEe------EccCCcEEEEEEcCCCcEEeeEEEEeeccc
Q 034229 30 NGYIVIKGRPCKVVEVSTSKTGK------HGHAKCHFVGI------DIFNGKKLEDIVPSSHNCDVLIYASLSAFN 93 (100)
Q Consensus 30 G~~I~i~g~Pc~Vve~~~~KpGK------hG~A~vr~k~k------nL~TG~~~E~t~~s~~~ve~~~le~~~~~~ 93 (100)
-.-|++|++-++|.++. .+||. |...-..+.+. -+-.|...+..++.++.+.+|.=..+.+.|
T Consensus 7 ~~~V~ien~~~rV~r~~-i~PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l~~G~~~~ip~G~~H~~~N 81 (98)
T 3lag_A 7 KSEIQIDNDEVRVTEWR-LPPGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRN 81 (98)
T ss_dssp EEEEEEESSSEEEEEEE-ECTTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEBC
T ss_pred eeeEEEcCCeEEEEEEE-ECCCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEecCCcEEEEcCCCcEECEE
Confidence 34578999999999886 46763 32222222211 112344445556677777665434444433
No 43
>3udc_A Small-conductance mechanosensitive channel, C-TER peptide from small-conductance...; membrane protein; 3.35A {Thermoanaerobacter tengcongensis} PDB: 3t9n_A*
Probab=23.21 E-value=65 Score=23.61 Aligned_cols=22 Identities=23% Similarity=0.406 Sum_probs=19.3
Q ss_pred cccccceEEEEcCeeEEEEEee
Q 034229 25 GTIRKNGYIVIKGRPCKVVEVS 46 (100)
Q Consensus 25 ~~LkkG~~I~i~g~Pc~Vve~~ 46 (100)
..+|.|++|.++|.-..|.++.
T Consensus 127 ~pf~vGD~I~i~~~~G~V~~I~ 148 (285)
T 3udc_A 127 DQFSVGDYVTINGISGTVEEIG 148 (285)
T ss_dssp TSCCTTCEEEETTEEEEEEEEC
T ss_pred CCccCCCEEEECCEEEEEEEee
Confidence 4689999999999999998865
No 44
>2ftc_K 39S ribosomal protein L19, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=23.16 E-value=1.6e+02 Score=19.02 Aligned_cols=21 Identities=14% Similarity=0.221 Sum_probs=18.2
Q ss_pred EEEEEeEccCCcEEEEEEcCC
Q 034229 58 CHFVGIDIFNGKKLEDIVPSS 78 (100)
Q Consensus 58 vr~k~knL~TG~~~E~t~~s~ 78 (100)
-.+.++++..|.-.|.+|+-.
T Consensus 40 ~tftvRki~~gvGVEr~fpl~ 60 (98)
T 2ftc_K 40 ATFILRNVIEGQGVEICFELY 60 (98)
T ss_pred cEEEEEEeccCceEEEEEecC
Confidence 358899999999999999754
No 45
>4e72_A Uncharacterized protein; PF11738 family, DUF3298, structural genomics, joint center F structural genomics, JCSG; 2.15A {Pseudomonas aeruginosa}
Probab=22.98 E-value=1.1e+02 Score=21.69 Aligned_cols=24 Identities=29% Similarity=0.362 Sum_probs=20.5
Q ss_pred cCCCCcccEEEEEEeEccCCcEEE
Q 034229 49 KTGKHGHAKCHFVGIDIFNGKKLE 72 (100)
Q Consensus 49 KpGKhG~A~vr~k~knL~TG~~~E 72 (100)
..|.||....+.---|+.||+.+.
T Consensus 109 tGGAHg~~~~~~~n~D~~tgk~it 132 (226)
T 4e72_A 109 TGGAHGMPGRGFINYDRRQHKVLS 132 (226)
T ss_dssp CSSSSCEEEEEEEEEETTTTEECC
T ss_pred cCccCCCCeeEEEEEECCCCcEee
Confidence 389999988888999999998854
No 46
>3uep_A YSCQ-C, type III secretion protein; cytosol, protein transport; 2.25A {Yersinia pseudotuberculosis}
Probab=22.94 E-value=1.3e+02 Score=18.92 Aligned_cols=20 Identities=5% Similarity=0.144 Sum_probs=15.2
Q ss_pred eccccccceEEEEcC---eeEEE
Q 034229 23 QAGTIRKNGYIVIKG---RPCKV 42 (100)
Q Consensus 23 ~~~~LkkG~~I~i~g---~Pc~V 42 (100)
+.-+|++|++|.++. +|..|
T Consensus 36 ell~L~~GdVI~Ld~~~~~~v~i 58 (96)
T 3uep_A 36 TLTSLEPGSLIDLTTPVDGEVRL 58 (96)
T ss_dssp HHHHCCTTCEEEEEEESSCEEEE
T ss_pred HHhcCCCCCEEEeCCCCCCcEEE
Confidence 356789999999984 56555
No 47
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=22.63 E-value=1.1e+02 Score=20.04 Aligned_cols=43 Identities=14% Similarity=0.276 Sum_probs=29.6
Q ss_pred EEeccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEE
Q 034229 21 PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKL 71 (100)
Q Consensus 21 ~i~~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~ 71 (100)
.+-+.+|.+|..|.++|+...+ .+-...| | ++-+++|..|...
T Consensus 34 aVAl~~L~aG~~v~~~g~~v~l--~~dIP~G-H-----KiAl~dI~~Ge~V 76 (105)
T 3k3s_A 34 AVALADLAEGTEVSVDNQTVTL--RQDVARG-H-----KFALTDIAKGANV 76 (105)
T ss_dssp EEESSCBCTTCEEEETTEEEEC--SSCBCTT-C-----EEESSCBCTTCEE
T ss_pred EEecCccCCCCEEeeCCcEEEE--CccCCCC-C-----EEEEcccCCCCeE
Confidence 4557789999999998875432 2434445 3 6788888888654
No 48
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=22.62 E-value=84 Score=21.39 Aligned_cols=20 Identities=35% Similarity=0.410 Sum_probs=16.2
Q ss_pred cccceEEEEcCeeEEEEEee
Q 034229 27 IRKNGYIVIKGRPCKVVEVS 46 (100)
Q Consensus 27 LkkG~~I~i~g~Pc~Vve~~ 46 (100)
+++|+.+.+++.+..|+++.
T Consensus 103 ~~~G~~~~~~~~~~~V~~v~ 122 (157)
T 3pr9_A 103 PIKGLTITIDGIPGKIVSIN 122 (157)
T ss_dssp CCTTCEEEETTEEEEEEEEE
T ss_pred cCCCcEEEecCCCeEEEEEc
Confidence 45699999999998887653
No 49
>2kj6_A Tubulin folding cofactor B; methods development, NESG, solution PSI-2, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=22.15 E-value=51 Score=20.68 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=24.1
Q ss_pred CCcccEEEEEEeE-ccCCcEEEEEEcCCCcEE
Q 034229 52 KHGHAKCHFVGID-IFNGKKLEDIVPSSHNCD 82 (100)
Q Consensus 52 KhG~A~vr~k~kn-L~TG~~~E~t~~s~~~ve 82 (100)
.||.+.|++.++. ...++..|..++.+++|+
T Consensus 9 ~~~~~~v~l~It~s~~~~~~~e~~v~~~~TV~ 40 (97)
T 2kj6_A 9 SHGDDSVHLHITHANLKSFSADARFSPQMSVE 40 (97)
T ss_dssp CCCCCCEEEEEEETTSSCCCEEEEECTTCCHH
T ss_pred cCCCceEEEEEEECCCCceEEEEEeCCCChHH
Confidence 3688999998886 444568999998888765
No 50
>2cp2_A CLIP-115, KIAA0291; microtubule binding, cytoskeleton associated protein, CYLN2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.10.1 PDB: 2cp7_A
Probab=22.11 E-value=41 Score=21.58 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=23.3
Q ss_pred cccCCceeeeEEeccccccceEEEEcCe-eEEE
Q 034229 11 KADAGASKTFPQQAGTIRKNGYIVIKGR-PCKV 42 (100)
Q Consensus 11 ~~~~~~s~t~~i~~~~LkkG~~I~i~g~-Pc~V 42 (100)
++.+.+|......+.+|+.|+.|.+.|. ...|
T Consensus 3 ~~~~~~s~~~~~~~~~~~vG~rV~V~g~~~GtV 35 (95)
T 2cp2_A 3 SGSSGAAEVGDDFLGDFVVGERVWVNGVKPGVV 35 (95)
T ss_dssp SCCCCCSCCCBSSCCSCCTTCEEEGGGSCEEEE
T ss_pred ccccccchhhhhhhhcCcCCCEEEECCceEEEE
Confidence 4455566666677889999999999874 4444
No 51
>2kca_A Bacteriophage SPP1 complete nucleotide sequence; beta-barrel, virus; NMR {Bacillus phage SPP1}
Probab=22.05 E-value=1.4e+02 Score=18.04 Aligned_cols=38 Identities=8% Similarity=0.089 Sum_probs=27.3
Q ss_pred cccCCceeeeEEe---ccccccceEEEEcCeeEEEEEe-eee
Q 034229 11 KADAGASKTFPQQ---AGTIRKNGYIVIKGRPCKVVEV-STS 48 (100)
Q Consensus 11 ~~~~~~s~t~~i~---~~~LkkG~~I~i~g~Pc~Vve~-~~~ 48 (100)
.+...+..|+.+. ..+|..++.|.++|+.|.|..+ ...
T Consensus 49 a~~~~~~~t~~~~iR~~~~i~~~~ri~~~g~~y~I~~v~~~~ 90 (109)
T 2kca_A 49 AQQLQTPIGYNIYTPYDDRIDKKMRVIYRGKIVTFIGDPVDL 90 (109)
T ss_dssp TCCCCCCCEEEEEEESCCCSSSSEEEEETTEEEEEEEEEEEC
T ss_pred hhhheeeEEEEEEEEcCCCCCCccEEEECCEEEEEEEeccCc
Confidence 3334444455443 4689999999999999999987 534
No 52
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=21.98 E-value=38 Score=21.07 Aligned_cols=23 Identities=13% Similarity=0.236 Sum_probs=19.0
Q ss_pred ccccccceEEEEcCeeEEEEEee
Q 034229 24 AGTIRKNGYIVIKGRPCKVVEVS 46 (100)
Q Consensus 24 ~~~LkkG~~I~i~g~Pc~Vve~~ 46 (100)
..+|++|.-|-++..-+.|+++.
T Consensus 53 ~~~LkpG~rVaLn~~s~~Iv~vL 75 (85)
T 3h43_A 53 PDDLAPGKRVCLNQQTLTVVDVL 75 (85)
T ss_dssp GGGCCTTCEEEECTTTCCEEEEC
T ss_pred HHHCCCCCEEEECCcccCHhhhh
Confidence 36899999999999888887654
No 53
>1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1
Probab=21.91 E-value=1.2e+02 Score=19.53 Aligned_cols=27 Identities=15% Similarity=0.171 Sum_probs=21.0
Q ss_pred eeEEeccccccceE--EEEcCeeEEEEEe
Q 034229 19 TFPQQAGTIRKNGY--IVIKGRPCKVVEV 45 (100)
Q Consensus 19 t~~i~~~~LkkG~~--I~i~g~Pc~Vve~ 45 (100)
+..+.+++|..|.. +.+.|.|..|+..
T Consensus 6 ~~~v~~s~l~~G~~~~v~~~g~pv~v~r~ 34 (129)
T 1rie_A 6 KIEIKLSDIPEGKNMAFKWRGKPLFVRHR 34 (129)
T ss_dssp SEEEEGGGSCTTCEEEEEETTEEEEEEEC
T ss_pred ceEeeHHHCCCCCEEEEEECCeEEEEEEC
Confidence 55669999999986 4568999888753
No 54
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=21.71 E-value=2.2e+02 Score=20.07 Aligned_cols=53 Identities=23% Similarity=0.397 Sum_probs=32.5
Q ss_pred eccccccceEEEEcCee-EEEEEeeee-cCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEE
Q 034229 23 QAGTIRKNGYIVIKGRP-CKVVEVSTS-KTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCD 82 (100)
Q Consensus 23 ~~~~LkkG~~I~i~g~P-c~Vve~~~~-KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve 82 (100)
+++++..-..|.++|.| +.++.+... ++|-+|++.+. +|+++=..+-++-.+-
T Consensus 114 ~vg~~~~~g~i~l~G~~t~~~~~Y~~pTk~G~CGgvl~~-------~gkIlGIHvaG~G~~G 168 (182)
T 2b0f_A 114 EVGPVTMAGLINLSSTPTNRMIRYDYATKTGQCGGVLCA-------TGKIFGIHVGGNGRQG 168 (182)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEESCCCTTCTTCEEEE-------TTEEEEEEEEEETTEE
T ss_pred EecceEEeceEcCCCcEecceEEeccCCCCcccCCeEEe-------CCCEEEEEeCCCCCce
Confidence 34444443335577863 566666655 88999988864 7776655555444333
No 55
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=21.68 E-value=85 Score=20.49 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=20.6
Q ss_pred cccCCceeeeEEecc-----ccccceEEEEcCe--eEEEEEe
Q 034229 11 KADAGASKTFPQQAG-----TIRKNGYIVIKGR--PCKVVEV 45 (100)
Q Consensus 11 ~~~~~~s~t~~i~~~-----~LkkG~~I~i~g~--Pc~Vve~ 45 (100)
...+|. .|.-+.++ .|++|+.|.++|+ .++|+++
T Consensus 14 ~I~~G~-KtiEiRlnd~k~~~ikvGD~I~f~~~~l~~~V~~v 54 (109)
T 2z0t_A 14 LIKAGK-KKIEGRLYDEKRRQIKPGDIIIFEGGKLKVKVKGI 54 (109)
T ss_dssp HHHTTS-CCEEEEECCTTGGGCCTTCEEEEGGGTEEEEEEEE
T ss_pred HHHcCC-CEEEEEecchhhhcCCCCCEEEECCCEEEEEEEEE
Confidence 444433 36666543 5689999999764 3444443
No 56
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=21.17 E-value=2.6e+02 Score=21.91 Aligned_cols=49 Identities=16% Similarity=0.260 Sum_probs=34.0
Q ss_pred ccceEEEEcCeeE---------EEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcCCCcEEee
Q 034229 28 RKNGYIVIKGRPC---------KVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDVL 84 (100)
Q Consensus 28 kkG~~I~i~g~Pc---------~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s~~~ve~~ 84 (100)
..++.+.+||... -.+ .++||+ .+|+.+.|.-.-..+...+ .++++.++
T Consensus 163 ~~~d~~liNG~~~~~~~~~~~~~~~---~v~~g~----~~RlRliN~~~~~~~~~~i-~gh~~~vi 220 (503)
T 1hfu_A 163 AQPDATLINGKGRYVGGPAAELSIV---NVEQGK----KYRMRLISLSCDPNWQFSI-DGHELTII 220 (503)
T ss_dssp -CCSEEEETTBCCBTTCCCCCCCEE---EECTTC----EEEEEEEECCSSCCEEEEE-TTCCEEEE
T ss_pred CCCCEEEECcccccCCCCCCcceEE---EEcCCC----EEEEEEEecCCcccEEEEE-cCceEEEE
Confidence 3588999999764 233 357887 7899999988777666665 35555543
No 57
>2lqk_A Transcriptional regulator; RNA polymerase interacting domain, transcription regulator; NMR {Thermus thermophilus}
Probab=26.21 E-value=21 Score=21.43 Aligned_cols=26 Identities=12% Similarity=0.116 Sum_probs=20.5
Q ss_pred cccccceEEEEcCe-eEEEEEeeeecC
Q 034229 25 GTIRKNGYIVIKGR-PCKVVEVSTSKT 50 (100)
Q Consensus 25 ~~LkkG~~I~i~g~-Pc~Vve~~~~Kp 50 (100)
+.|++|++|.+..+ .|+|..++...-
T Consensus 5 ~~f~~GD~VVy~~hGvg~i~gIe~~~v 31 (70)
T 2lqk_A 5 KEFRPGDKVVLPPYGVGVVAGIAQRSV 31 (70)
Confidence 48999999998655 888888776554
No 58
>2ifr_A Scytalidopepsin B; enzyme-transition state analog complex, hydrolase-hydrolase complex; HET: TA2; 1.95A {Scytalidium lignicola} SCOP: b.29.1.20 PDB: 1s2b_A* 1s2k_A* 2ifw_A*
Probab=20.47 E-value=2.5e+02 Score=20.25 Aligned_cols=41 Identities=17% Similarity=0.221 Sum_probs=28.7
Q ss_pred ccccccceEEEEcCeeEEEEEeeeecCCCCcccEEEEEEeEccCCcEEEEEEcC
Q 034229 24 AGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPS 77 (100)
Q Consensus 24 ~~~LkkG~~I~i~g~Pc~Vve~~~~KpGKhG~A~vr~k~knL~TG~~~E~t~~s 77 (100)
.-.+++|+.|... +....+.+ | .+.+.|+-||+.+.+++.+
T Consensus 80 ~~~vs~GD~i~~t--------V~~~s~t~-g----~~tleN~ttg~~~t~t~s~ 120 (206)
T 2ifr_A 80 GITISEGDSIQMS--------VTATSDTS-G----SATLENLTTGQKVSKSFSN 120 (206)
T ss_dssp -CCCCTTCEEEEE--------EEEEETTE-E----EEEEEETTTTEEEEEEECC
T ss_pred cceeCCCCEEEEE--------EEEcCCCc-E----EEEEEECCCCEEEEEEEcc
Confidence 3457788887653 33333333 3 6889999999999999966
No 59
>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1
Probab=20.35 E-value=75 Score=19.33 Aligned_cols=20 Identities=0% Similarity=0.049 Sum_probs=15.8
Q ss_pred eccccccceEEEEc---CeeEEE
Q 034229 23 QAGTIRKNGYIVIK---GRPCKV 42 (100)
Q Consensus 23 ~~~~LkkG~~I~i~---g~Pc~V 42 (100)
+.-+|++|++|.++ ++|..|
T Consensus 32 ell~L~~GdVi~Ld~~~~e~v~i 54 (84)
T 1o9y_A 32 ELRRLDAGTILEVTGISPGHATL 54 (84)
T ss_dssp HHHTCCTTCEEEECSSCTTEEEE
T ss_pred HHhcCCCCCEEEeCCCCCCCEEE
Confidence 45689999999999 567655
Done!