BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034230
(100 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|388505468|gb|AFK40800.1| unknown [Medicago truncatula]
Length = 100
Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/100 (84%), Positives = 93/100 (93%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
MLPQ +KK V DNPKKLANLIDLVNLPSTLR+FVGQS+ SRL CFMRVWSYIKTNNLQDP
Sbjct: 1 MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDFVGQSQTSRLSCFMRVWSYIKTNNLQDP 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NNKNVVNCD+KL+ IL+GK +V+LAELPALIKLHFPK+PK
Sbjct: 61 NNKNVVNCDEKLKGILLGKPQVDLAELPALIKLHFPKEPK 100
>gi|224136902|ref|XP_002322444.1| predicted protein [Populus trichocarpa]
gi|222869440|gb|EEF06571.1| predicted protein [Populus trichocarpa]
Length = 100
Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/100 (83%), Positives = 92/100 (92%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
MLPQ +KK + DNPK+LANLIDLVNLPSTLR+FVGQS+IS LGCFMRVWSYIKTNNLQDP
Sbjct: 1 MLPQKMKKAITDNPKQLANLIDLVNLPSTLRDFVGQSQISHLGCFMRVWSYIKTNNLQDP 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NNKNVVNCD+KL+SIL+GK +VEL ELPALIKLHFPK K
Sbjct: 61 NNKNVVNCDEKLKSILLGKQQVELVELPALIKLHFPKQKK 100
>gi|225460865|ref|XP_002277738.1| PREDICTED: upstream activation factor subunit UAF30 [Vitis
vinifera]
gi|297737490|emb|CBI26691.3| unnamed protein product [Vitis vinifera]
Length = 100
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/100 (85%), Positives = 91/100 (91%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
MLPQ VK+ + +NPKKLANLIDL NLPSTLREFVGQS+ISRLGCFMRVWSYIK NNLQDP
Sbjct: 1 MLPQRVKRAITENPKKLANLIDLANLPSTLREFVGQSQISRLGCFMRVWSYIKANNLQDP 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NNKNVV CD KLRSIL+GK RVELAELPALIKLHFPK+ K
Sbjct: 61 NNKNVVICDDKLRSILLGKPRVELAELPALIKLHFPKERK 100
>gi|351724909|ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycine max]
gi|255631726|gb|ACU16230.1| unknown [Glycine max]
Length = 100
Score = 174 bits (440), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/100 (83%), Positives = 93/100 (93%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
MLPQ +KK + DNPKKLANLIDLVNLPSTLREFVGQS+ISRLGCF +WSYIKTNNLQD
Sbjct: 1 MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCIWSYIKTNNLQDQ 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NNKNVVNCD+KL+SIL+GK +VELAELPALIK+HFPK+PK
Sbjct: 61 NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100
>gi|356567136|ref|XP_003551777.1| PREDICTED: upstream activation factor subunit spp27-like [Glycine
max]
Length = 100
Score = 171 bits (434), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/100 (83%), Positives = 92/100 (92%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
MLPQ +KK + DNPKKLANLIDLVNLPSTLREFVGQS+ISRLGCF VW YIKTNNLQD
Sbjct: 1 MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWFYIKTNNLQDQ 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NNKNVVNCD+KL+SIL+GK +VELAELPALIK+HFPK+PK
Sbjct: 61 NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100
>gi|297799312|ref|XP_002867540.1| hypothetical protein ARALYDRAFT_354113 [Arabidopsis lyrata subsp.
lyrata]
gi|297313376|gb|EFH43799.1| hypothetical protein ARALYDRAFT_354113 [Arabidopsis lyrata subsp.
lyrata]
Length = 320
Score = 171 bits (432), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 80/95 (84%), Positives = 88/95 (92%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
+KK + DNPKKL NLIDLVNLPSTLREFVGQS+ISRLGCFMRVWSYIKTNNLQDP NKNV
Sbjct: 226 LKKAITDNPKKLGNLIDLVNLPSTLREFVGQSQISRLGCFMRVWSYIKTNNLQDPKNKNV 285
Query: 66 VNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
V CD+KL+SIL+GK RVEL ELP+LIKLHFPK+PK
Sbjct: 286 VICDEKLKSILLGKQRVELVELPSLIKLHFPKEPK 320
>gi|15236880|ref|NP_194411.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|186513923|ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|4455204|emb|CAB36527.1| putative protein [Arabidopsis thaliana]
gi|7269533|emb|CAB79536.1| putative protein [Arabidopsis thaliana]
gi|38566544|gb|AAR24162.1| At4g26810 [Arabidopsis thaliana]
gi|40823827|gb|AAR92306.1| At4g26810 [Arabidopsis thaliana]
gi|332659855|gb|AEE85255.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|332659856|gb|AEE85256.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 106
Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 90/100 (90%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
MLPQ +KK + DNPKKL NLIDLVNLPSTLR FVGQS+ISRLGCFMRVWSYIKTNNLQDP
Sbjct: 1 MLPQRLKKAITDNPKKLGNLIDLVNLPSTLRNFVGQSQISRLGCFMRVWSYIKTNNLQDP 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NKNVV CD+KL+SIL+GK RVEL +LP+LIKLHFPK+ K
Sbjct: 61 KNKNVVICDEKLKSILLGKQRVELVDLPSLIKLHFPKEQK 100
>gi|91107221|gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]
Length = 100
Score = 168 bits (426), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/100 (79%), Positives = 90/100 (90%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
MLPQ +KK + DNPKKLANLIDLVNLPSTLREF+GQS+ SRLGCF RVWSYIK NNLQDP
Sbjct: 1 MLPQRMKKVMTDNPKKLANLIDLVNLPSTLREFMGQSQTSRLGCFKRVWSYIKENNLQDP 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NNKN+VNCD+KL+S+L+GK +VEL ELP LIKLHFPK P+
Sbjct: 61 NNKNLVNCDEKLKSVLLGKPQVELTELPTLIKLHFPKQPR 100
>gi|449531627|ref|XP_004172787.1| PREDICTED: upstream activation factor subunit spp27-like [Cucumis
sativus]
Length = 100
Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/100 (78%), Positives = 87/100 (87%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
M + +K + DNPKKLANLIDLVNLPSTLREFVG S+ISRLGCF VWSYIKTNNLQDP
Sbjct: 1 MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NKNVV CD+KL+SIL+GK +VELAELPALIKLHFPK+ K
Sbjct: 61 TNKNVVICDEKLKSILLGKPKVELAELPALIKLHFPKNSK 100
>gi|449457359|ref|XP_004146416.1| PREDICTED: protein TRI1-like [Cucumis sativus]
Length = 127
Score = 141 bits (355), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 76/89 (85%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
M + +K + DNPKKLANLIDLVNLPSTLREFVG S+ISRLGCF VWSYIKTNNLQDP
Sbjct: 1 MATKRMKMAITDNPKKLANLIDLVNLPSTLREFVGHSQISRLGCFKCVWSYIKTNNLQDP 60
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPA 89
NKNVV CD+KL+SIL+GK +VELAELP
Sbjct: 61 TNKNVVICDEKLKSILLGKPKVELAELPT 89
>gi|115478068|ref|NP_001062629.1| Os09g0133000 [Oryza sativa Japonica Group]
gi|47848445|dbj|BAD22301.1| SWIB complex BAF60b domain-containing protein-like [Oryza sativa
Japonica Group]
gi|50726534|dbj|BAD34141.1| SWIB complex BAF60b domain-containing protein-like [Oryza sativa
Japonica Group]
gi|113630862|dbj|BAF24543.1| Os09g0133000 [Oryza sativa Japonica Group]
gi|125562826|gb|EAZ08206.1| hypothetical protein OsI_30466 [Oryza sativa Indica Group]
gi|125604800|gb|EAZ43836.1| hypothetical protein OsJ_28454 [Oryza sativa Japonica Group]
Length = 102
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQD 59
M+ + V D PKK+A L+DLVNLP+ LREF G QS++S L F+RVWS+IK+NNLQD
Sbjct: 1 MVLRRATAAVGDCPKKVAKLVDLVNLPTALREFAGGQSQMSHLSFFLRVWSHIKSNNLQD 60
Query: 60 PNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
P+N+N+VNCD KL+++L+G+S+VEL+ELP L+KLHFPK PK
Sbjct: 61 PSNRNIVNCDDKLKTVLLGRSKVELSELPMLVKLHFPKFPK 101
>gi|357158121|ref|XP_003578023.1| PREDICTED: uncharacterized protein LOC100833627 [Brachypodium
distachyon]
Length = 98
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
+++ +++PKK+A L+DLVNLP+ LREF G +S++S L F+ VWS+IK NNLQDP N+N
Sbjct: 3 LRRAAVESPKKVAALVDLVNLPTALREFAGGRSQMSHLSFFLGVWSHIKNNNLQDPTNRN 62
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+VNCD+KL+++L+G+S+VEL+ELP L+KLHFPK
Sbjct: 63 IVNCDEKLKTVLVGRSKVELSELPMLVKLHFPK 95
>gi|326522917|dbj|BAJ88504.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326526679|dbj|BAK00728.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 99
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
+++ +++PKK+A L+DLVNLP+ LREF G +S++S L F+ VWS+IK NNLQDP N+N
Sbjct: 3 LRRAAVESPKKVAALVDLVNLPTALREFAGGRSQMSHLSFFLGVWSHIKNNNLQDPTNRN 62
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+VNCD KL+++L+G+S+VEL+ELP L+KLHFPK
Sbjct: 63 IVNCDNKLKTVLLGRSKVELSELPMLVKLHFPK 95
>gi|226528866|ref|NP_001148297.1| SWIb domain-containing protein [Zea mays]
gi|195617230|gb|ACG30445.1| SWIb domain-containing protein [Zea mays]
Length = 98
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 79/96 (82%), Gaps = 1/96 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
+++ + ++PKK+A L DLVNLP LREF G QS++S + F+RVWSYIK N LQDP NKN
Sbjct: 3 LRRAITESPKKVAGLKDLVNLPIQLREFAGGQSQMSHISFFLRVWSYIKDNKLQDPTNKN 62
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
+V CD+KL+++L+G+S+V+L+ELP ++KLHFPK PK
Sbjct: 63 IVKCDEKLKTVLLGRSKVQLSELPMIVKLHFPKLPK 98
>gi|242073050|ref|XP_002446461.1| hypothetical protein SORBIDRAFT_06g016360 [Sorghum bicolor]
gi|241937644|gb|EES10789.1| hypothetical protein SORBIDRAFT_06g016360 [Sorghum bicolor]
Length = 98
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 79/96 (82%), Gaps = 1/96 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
+K+ + PKK+A L+DLVNLP+ LREF G +S++S + F+RVWSYIK N LQDP N+N
Sbjct: 3 LKRAAAECPKKVAGLMDLVNLPTQLREFAGGRSQMSHISFFLRVWSYIKDNKLQDPTNRN 62
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
+V CD+KL+++L+GKS+VEL+ELP ++KLHFP+ P+
Sbjct: 63 IVKCDEKLKTVLLGKSKVELSELPMIVKLHFPRFPR 98
>gi|357130733|ref|XP_003567001.1| PREDICTED: uncharacterized protein LOC100834706 [Brachypodium
distachyon]
Length = 98
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
+++ +++PKK+A L+DLVNLP+ LREF G +S++S L F+ VWS+IK NNLQDP N++
Sbjct: 3 LRRAAVESPKKVAALVDLVNLPTALREFAGGRSQMSHLSFFLGVWSHIKNNNLQDPTNRS 62
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+VNCD+KL+++L G+S+VEL+ELP L+KLHFPK
Sbjct: 63 IVNCDEKLKTVLSGRSKVELSELPMLVKLHFPK 95
>gi|226506090|ref|NP_001146978.1| SWIb domain-containing protein [Zea mays]
gi|195606058|gb|ACG24859.1| SWIb domain-containing protein [Zea mays]
gi|195610904|gb|ACG27282.1| SWIb domain-containing protein [Zea mays]
gi|414587291|tpg|DAA37862.1| TPA: hypothetical protein ZEAMMB73_400027 [Zea mays]
Length = 98
Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
+++ + PKK+A L DLVNLP+ LREF G +S++S + F+ VWSYIK N LQDP NKN
Sbjct: 3 LRRAATECPKKVAGLKDLVNLPTQLREFAGGRSQMSHISFFLSVWSYIKDNKLQDPTNKN 62
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
+V CD+KL+++L+G+S+V+L+ELP ++KLHFPK PK
Sbjct: 63 IVKCDEKLKTVLLGRSKVQLSELPMIVKLHFPKLPK 98
>gi|413918313|gb|AFW58245.1| hypothetical protein ZEAMMB73_992750 [Zea mays]
Length = 100
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 72/99 (72%), Gaps = 5/99 (5%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISR--LGCFMRVWSYI--KTNNLQDPN 61
+++ + PKK+A L DLVNL + LREF G R+++ L F+ ++S K +LQDP
Sbjct: 3 LRRATTECPKKVAGLKDLVNLLTQLREFAG-GRLNKNALCGFIIIFSRYGNKYPDLQDPT 61
Query: 62 NKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDPK 100
NKN+V CD+KL+ +L+G+S+V+L+ELP ++KL+FPK PK
Sbjct: 62 NKNIVKCDEKLKIVLLGRSKVQLSELPMIVKLNFPKLPK 100
>gi|255645009|gb|ACU23004.1| unknown [Glycine max]
Length = 71
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/49 (83%), Positives = 44/49 (89%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVW 49
MLPQ +KK + DNPKKLANLIDLVNLPSTLREFVGQS+ISRLGCF VW
Sbjct: 1 MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVW 49
>gi|449523960|ref|XP_004168991.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 146
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 14 PKKLAN----LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCD 69
PKK+AN L+ + TL F+GQS I+R ++W+YIK NNLQ+P +K + CD
Sbjct: 57 PKKVANPSGGLLKTQKVSPTLAGFLGQSEIARTEAVKQIWAYIKLNNLQNPTDKRQIICD 116
Query: 70 QKLRSILMGKSRVELAELPALIKLHFPKD 98
KL++I G+ +V + E+P + +HF K
Sbjct: 117 AKLKAIFGGREKVGMLEIPKFLSIHFVKS 145
>gi|33667910|gb|AAQ24534.1| SWIb domain-containing protein [Solanum chacoense]
Length = 148
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L++FVG S ISR ++W YIKTNNLQ+P NK +NCD L++I GK +V E+
Sbjct: 78 ALQKFVGTSEISRTDAVKKIWDYIKTNNLQNPANKKEINCDDMLKTIFAGKDKVGFLEIA 137
Query: 89 ALIKLHFPK 97
L+ HF K
Sbjct: 138 KLLSFHFQK 146
>gi|449454542|ref|XP_004145013.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
gi|449473955|ref|XP_004154030.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 146
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 14 PKKLAN----LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCD 69
PKK+AN L+ + TL F+GQS I+R ++W YIK NNLQ+P +K + CD
Sbjct: 57 PKKVANPSGGLLKTQKVSPTLAGFLGQSEIARTEAVKQIWVYIKLNNLQNPTDKRQIICD 116
Query: 70 QKLRSILMGKSRVELAELPALIKLHFPKD 98
KL++I G+ +V + E+P + +HF K
Sbjct: 117 AKLKAIFGGREKVGMLEIPKFLSIHFVKS 145
>gi|357484389|ref|XP_003612482.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355513817|gb|AES95440.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|388497934|gb|AFK37033.1| unknown [Medicago truncatula]
Length = 134
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 5 GVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
VKKTV K + +V + S L F+G +SR +VW YIK NLQ+PNNK
Sbjct: 42 AVKKTV--TSKSTGGIQKVVQVTSELGNFIGAPEVSRTEAVKKVWEYIKLQNLQNPNNKK 99
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPKD 98
+ CD KL++I GK +V E+ L+ HF K
Sbjct: 100 EIFCDDKLKTIFDGKDKVVFTEIAKLLATHFVKS 133
>gi|168027533|ref|XP_001766284.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682498|gb|EDQ68916.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 107
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
L + + TL++F+G SR R+W YIK LQ+P NK + CD+KL+ +L
Sbjct: 15 GALTRAIQVSPTLKKFLGVGECSRPESMKRIWDYIKDQKLQNPQNKREILCDEKLKPVLG 74
Query: 78 GKSRVELAELPALIKLHFPKDPK 100
GK +V E+ L+ HFPK PK
Sbjct: 75 GKDKVGFTEIAKLLSEHFPKAPK 97
>gi|351725697|ref|NP_001235054.1| uncharacterized protein LOC100499975 [Glycine max]
gi|255628211|gb|ACU14450.1| unknown [Glycine max]
Length = 139
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+ + VG ++R R+W+YIK NNLQDP +K +NCD+KL+ + GK +VE+ E+
Sbjct: 67 MEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIAR 126
Query: 90 LIKLHF 95
LI HF
Sbjct: 127 LISPHF 132
>gi|351725129|ref|NP_001235290.1| uncharacterized protein LOC100306198 [Glycine max]
gi|255627841|gb|ACU14265.1| unknown [Glycine max]
Length = 148
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+ + VG ++R R+W+YIK NNLQDP +K +NCD+KL+ + GK +VE+ E+
Sbjct: 76 MEDLVGAPEMARTQVLKRIWAYIKDNNLQDPTDKRTINCDEKLKKVFAGKDQVEMLEIAR 135
Query: 90 LIKLHF 95
LI HF
Sbjct: 136 LISPHF 141
>gi|326507382|dbj|BAK03084.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326515542|dbj|BAK07017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L+ F+G + + R R+W+YIK NNLQDP +K ++ CD+KL+++ G+ RV E+
Sbjct: 68 ALQAFMGAAEVPRTEAMKRIWAYIKQNNLQDPEDKKIIVCDEKLKALFAGRERVGFLEVA 127
Query: 89 ALIKLHFPKDP 99
L+ HF K P
Sbjct: 128 KLLSPHFVKVP 138
>gi|357114653|ref|XP_003559112.1| PREDICTED: upstream activation factor subunit UAF30-like
[Brachypodium distachyon]
Length = 138
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L+ VG S + R R+W+YIK NNLQDP +K V+ CDQKL+++ G+ RV E+
Sbjct: 68 ALQAVVGASEVPRTEAIKRLWAYIKQNNLQDPMDKKVIVCDQKLKALFAGRERVGFLEIA 127
Query: 89 ALIKLHFPKDP 99
L+ HF K P
Sbjct: 128 KLLNPHFVKAP 138
>gi|297823353|ref|XP_002879559.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325398|gb|EFH55818.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%)
Query: 13 NPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
N ++ ++ +V + L F+G++ +SR ++W YIK NNLQ+P NK + CD++L
Sbjct: 26 NGRQGTGILKVVPVSKPLATFIGENEVSRTTAVKKIWEYIKLNNLQNPENKREILCDEQL 85
Query: 73 RSILMGKSRVELAELPALIKLHFPKD 98
++I GK V E+ L+ HFPK
Sbjct: 86 KTIFSGKDTVGFLEISKLLSQHFPKS 111
>gi|225429337|ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
Length = 145
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+++F+G I R ++W+YIK +NLQDP NK ++ CD+KL+SI GK RV E+
Sbjct: 78 MQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAG 137
Query: 90 LIKLHF 95
LI HF
Sbjct: 138 LINPHF 143
>gi|147843362|emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
Length = 145
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+++F+G I R ++W+YIK +NLQDP NK ++ CD+KL+SI GK RV E+
Sbjct: 78 MQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAG 137
Query: 90 LIKLHF 95
LI HF
Sbjct: 138 LINPHF 143
>gi|255555227|ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
gi|223542031|gb|EEF43575.1| brg-1 associated factor, putative [Ricinus communis]
Length = 141
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+ E VG S I R R+W++IK NNLQDP NK ++ CD+KL+ I G+ RV E+
Sbjct: 74 MAELVGASEIPRTQALKRIWAHIKENNLQDPENKKIIICDEKLKKIFGGRDRVGFLEVAG 133
Query: 90 LIKLHF 95
LI HF
Sbjct: 134 LISPHF 139
>gi|296083088|emb|CBI22492.3| unnamed protein product [Vitis vinifera]
Length = 68
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+++F+G I R ++W+YIK +NLQDP NK ++ CD+KL+SI GK RV E+
Sbjct: 1 MQDFLGVPEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDEKLKSIFAGKDRVGFLEIAG 60
Query: 90 LIKLHFPK 97
LI HF K
Sbjct: 61 LINPHFLK 68
>gi|326511287|dbj|BAJ87657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 157
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L+ F+G + + R R+W+YIK NNLQDP +K ++ CD+KL+++ G+ RV E+
Sbjct: 87 ALQAFMGAAEVPRTEAMKRIWAYIKQNNLQDPEDKKIIVCDEKLKALFAGRERVGFLEVA 146
Query: 89 ALIKLHFPKDP 99
L+ HF K P
Sbjct: 147 KLLSPHFVKVP 157
>gi|18403898|ref|NP_565810.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13877943|gb|AAK44049.1|AF370234_1 unknown protein [Arabidopsis thaliana]
gi|16323472|gb|AAL15230.1| unknown protein [Arabidopsis thaliana]
gi|20197355|gb|AAM15040.1| Expressed protein [Arabidopsis thaliana]
gi|20197527|gb|AAM15113.1| Expressed protein [Arabidopsis thaliana]
gi|21618090|gb|AAM67140.1| unknown [Arabidopsis thaliana]
gi|26451839|dbj|BAC43012.1| unknown protein [Arabidopsis thaliana]
gi|330254033|gb|AEC09127.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 109
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%)
Query: 1 MLPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
++ + T ++ ++ +V + L F+G++ +SR ++W YIK NNLQ+P
Sbjct: 11 LMAKAASSTGAKTGRQGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNP 70
Query: 61 NNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDP 99
NK + CD++L++I GK V E+ L+ HFPK
Sbjct: 71 VNKREILCDEQLKTIFSGKDTVGFLEISKLLSQHFPKSA 109
>gi|226498430|ref|NP_001143368.1| uncharacterized protein LOC100275998 [Zea mays]
gi|195619068|gb|ACG31364.1| hypothetical protein [Zea mays]
gi|223975083|gb|ACN31729.1| unknown [Zea mays]
gi|413942035|gb|AFW74684.1| hypothetical protein ZEAMMB73_000211 [Zea mays]
Length = 143
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 26 LPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+ + LREFVG + + R VW++IK NNLQDPNNK ++ CD+KL+ I G+ RV
Sbjct: 71 ISTELREFVGGAAELPRTEAIKLVWAHIKGNNLQDPNNKKIIICDEKLKKIFGGRDRVGF 130
Query: 85 AELPALIKLHFPK 97
E+ L+ HF K
Sbjct: 131 LEISGLLNPHFQK 143
>gi|297851606|ref|XP_002893684.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339526|gb|EFH69943.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 112
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L F G+S ++R +VW Y+K +NLQ+P NK ++CD KL++I GK +V + E+
Sbjct: 43 LASFAGESELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMK 102
Query: 90 LIKLHFPKD 98
L+ HFPK
Sbjct: 103 LLSPHFPKS 111
>gi|218186922|gb|EEC69349.1| hypothetical protein OsI_38464 [Oryza sativa Indica Group]
gi|222617148|gb|EEE53280.1| hypothetical protein OsJ_36231 [Oryza sativa Japonica Group]
Length = 78
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 26 LPSTLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+ + LREFVG + + R +W++IK NNLQDPNNK ++ CD+KL+ I G+ RV
Sbjct: 6 ISAELREFVGGAEELPRTEALKIIWAHIKGNNLQDPNNKKIIVCDEKLKKIFGGRDRVGF 65
Query: 85 AELPALIKLHFPK 97
E+ L+ HF K
Sbjct: 66 LEISGLLNPHFQK 78
>gi|356538435|ref|XP_003537709.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
max]
Length = 132
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
+V + S L +F+G ++SR +VW+YIK NLQ+P NK + CD+KL++I GK +V
Sbjct: 56 VVPVSSELGDFLGAPQVSRTDAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKV 115
Query: 83 ELAELPALIKLHFPKD 98
E+ L+ HF K
Sbjct: 116 GFTEIAKLLSSHFVKS 131
>gi|449438339|ref|XP_004136946.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 140
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG ISR +W+YIK NNLQ P+NK V+ CD+KL+ I GK V E+
Sbjct: 74 LQALVGAPEISRTQALKVIWAYIKENNLQKPSNKKVIACDEKLKKIFGGKDEVGFLEIAG 133
Query: 90 LIKLHF 95
LI HF
Sbjct: 134 LISPHF 139
>gi|356496496|ref|XP_003517103.1| PREDICTED: upstream activation factor subunit UAF30-like [Glycine
max]
Length = 132
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
+V + S L +F+G ++SR +VW+YIK NLQ+P NK + CD+KL++I GK +V
Sbjct: 56 VVPVSSELGDFLGAPQVSRTEAVKKVWAYIKLQNLQNPANKKEIFCDEKLKTIFEGKDKV 115
Query: 83 ELAELPALIKLHFPKD 98
E+ L+ HF K
Sbjct: 116 GFTEIAKLLSNHFVKS 131
>gi|225436221|ref|XP_002270166.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
gi|147798865|emb|CAN68050.1| hypothetical protein VITISV_015104 [Vitis vinifera]
gi|296090194|emb|CBI40013.3| unnamed protein product [Vitis vinifera]
Length = 128
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%)
Query: 8 KTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVN 67
+T P + + V + LR+F+G SR ++W +IK NNLQ+P NK +
Sbjct: 37 RTAAKGPPRSGGITKPVPVSPALRKFLGVPEASRAEAVKKIWEHIKLNNLQNPTNKREIL 96
Query: 68 CDQKLRSILMGKSRVELAELPALIKLHF 95
CD+KL+S+ GK +V E+ L+ HF
Sbjct: 97 CDEKLKSVFEGKDKVGFLEIGKLLSHHF 124
>gi|357146513|ref|XP_003574019.1| PREDICTED: protein TRI1-like [Brachypodium distachyon]
Length = 135
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 3 PQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQS-RISRLGCFMRVWSYIKTNNLQDPN 61
P+ K K+L ++ V + LR F G + ISR VW++IK NNLQ+P
Sbjct: 38 PKVTTKADAAEAKELRGIMRPVPVSDALRRFPGGAPEISRANAIKIVWAHIKANNLQNPA 97
Query: 62 NKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
N+ +NCD+KL+SI G+ +V + E+ L+ HF K
Sbjct: 98 NRKEINCDEKLKSIFSGRDKVGMMEISRLLSPHFMK 133
>gi|18398106|ref|NP_564382.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|12321306|gb|AAG50727.1|AC079041_20 hypothetical protein [Arabidopsis thaliana]
gi|12597845|gb|AAG60155.1|AC074360_20 hypothetical protein [Arabidopsis thaliana]
gi|21537302|gb|AAM61643.1| unknown [Arabidopsis thaliana]
gi|89001005|gb|ABD59092.1| At1g31760 [Arabidopsis thaliana]
gi|332193268|gb|AEE31389.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 112
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 43/69 (62%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L F G+ ++R +VW Y+K +NLQ+P NK ++CD KL++I GK +V + E+
Sbjct: 43 LASFAGERELTRGSALKKVWEYVKLHNLQNPANKKEIHCDDKLKTIFDGKDKVGITEIMK 102
Query: 90 LIKLHFPKD 98
L+ HFPK
Sbjct: 103 LLSPHFPKS 111
>gi|388522755|gb|AFK49439.1| unknown [Lotus japonicus]
Length = 132
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 6 VKKTVIDNPKKLANLIDLVNLP----STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
V + P N I + P ++ G ISR +W+YIK NNLQDP
Sbjct: 37 VTSATVSQPSAAGNKIRGIMKPRKISPEMQSICGVPEISRTQALKHIWAYIKENNLQDPE 96
Query: 62 NKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
NK ++ CD+KL+ + GK V + ++ LI HF
Sbjct: 97 NKKLIRCDEKLKKVFAGKDEVGMLQIAGLISPHF 130
>gi|357480689|ref|XP_003610630.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355511965|gb|AES93588.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|388522227|gb|AFK49175.1| unknown [Medicago truncatula]
Length = 143
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 3 PQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNN 62
P G K I PKK++ +++ VGQ ISR +W++IK +NLQ+P
Sbjct: 58 PTGGKIRGIMKPKKIS---------PEMQDLVGQPEISRTQALKSIWAHIKEHNLQNPEK 108
Query: 63 KNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
K ++ CD+KL+ + G+ V++ E+ LI HF
Sbjct: 109 KRLIRCDEKLKKVFAGRDEVDMLEIAGLISPHF 141
>gi|242032907|ref|XP_002463848.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor]
gi|241917702|gb|EER90846.1| hypothetical protein SORBIDRAFT_01g007350 [Sorghum bicolor]
Length = 143
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 3 PQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNN 62
P+ + T I PK ++ L+ VG+ I R R+W+YIK +NLQDP++
Sbjct: 58 PKKKRATGITQPKPVS---------PALQAIVGEPVIPRTEALKRLWAYIKEHNLQDPSD 108
Query: 63 KNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
K VV CD+KL+ + G+ RV E+ L+ HF
Sbjct: 109 KKVVICDEKLKVLFAGRERVGFLEIAKLLNPHF 141
>gi|115444003|ref|NP_001045781.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|41052552|dbj|BAD07734.1| putative SWIb domain-containing protein [Oryza sativa Japonica
Group]
gi|41053059|dbj|BAD07989.1| putative SWIb domain-containing protein [Oryza sativa Japonica
Group]
gi|113535312|dbj|BAF07695.1| Os02g0130000 [Oryza sativa Japonica Group]
gi|125580680|gb|EAZ21611.1| hypothetical protein OsJ_05241 [Oryza sativa Japonica Group]
gi|215741232|dbj|BAG97727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 131
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVGQS-RISRLGCFMRVWSYIKTNNLQDPNNKN 64
V KT K+ ++ V + L F G + +SR G +W++IK N LQ+P NK
Sbjct: 37 VTKTEAAQAKEKRGIMQPVPVSDALSRFAGGAPEMSRAGAVKLIWNHIKANGLQNPANKR 96
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+NCD KL+S+ GK +V + E+ L+ HF K
Sbjct: 97 EINCDDKLKSLFAGKDKVGMMEIAKLLSPHFIK 129
>gi|242085638|ref|XP_002443244.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
gi|241943937|gb|EES17082.1| hypothetical protein SORBIDRAFT_08g016260 [Sorghum bicolor]
Length = 147
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 30 LREFVGQS-RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
LREFVG + + R VW++IK NNLQDPN+K ++ CD KL+ I G+ RV E+
Sbjct: 79 LREFVGGAPELPRTEAIKLVWAHIKGNNLQDPNDKKIIICDDKLKKIFGGRDRVGFLEIS 138
Query: 89 ALIKLHFPK 97
L+ HF K
Sbjct: 139 GLLNPHFQK 147
>gi|413932997|gb|AFW67548.1| SWIb domain-containing protein [Zea mays]
Length = 145
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 3 PQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNN 62
P+ + T I PK ++ L+ VG I R R+W+YIK +NLQDP++
Sbjct: 60 PKKKRATGITQPKSVS---------PALQAIVGDPVIPRTEVLKRLWAYIKEHNLQDPSD 110
Query: 63 KNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
K VV CD+KL+ + G+ RV E+ L+ HF K
Sbjct: 111 KKVVVCDEKLKVLFAGRERVGFLEIAKLLNPHFVK 145
>gi|326491561|dbj|BAJ94258.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 146
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 13 NPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
+P L ++ V + L +F G ISR G VW Y+K N+LQ+P NK + CD+KL
Sbjct: 60 DPNNLRGIMRPVPVSDALSKFGGAPNISRSGVLKIVWDYVKANSLQNPANKKEIICDEKL 119
Query: 73 RSILMGKSRVELAELPALIKLHFPK 97
++I G++ V + E+ L+ HF K
Sbjct: 120 KTIFDGRNTVHMTEVTKLLSPHFVK 144
>gi|14488372|gb|AAK63939.1|AC084282_20 hypothetical protein [Oryza sativa Japonica Group]
gi|108711209|gb|ABF99004.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|125545801|gb|EAY91940.1| hypothetical protein OsI_13627 [Oryza sativa Indica Group]
gi|215769247|dbj|BAH01476.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 144
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L+ VG + I R R+W+YIK +NLQDP +K V+ CD+KL+ + G+ RV E+
Sbjct: 76 ALQAVVGAAEIPRTEALKRLWAYIKQHNLQDPADKKVIVCDEKLKVLFAGQERVGFLEVA 135
Query: 89 ALIKLHFPK 97
L+ HF K
Sbjct: 136 KLLNPHFVK 144
>gi|357152250|ref|XP_003576058.1| PREDICTED: uncharacterized protein LOC100825851 [Brachypodium
distachyon]
Length = 153
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 30 LREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
LREFVG + + R +W++IK NNLQDP NK ++ CD KL+ I G+ RV E+
Sbjct: 85 LREFVGGAEELPRTEALKIIWAHIKGNNLQDPANKKIIVCDDKLKKIFGGRDRVGFLEIS 144
Query: 89 ALIKLHFPK 97
L+ HF K
Sbjct: 145 GLLNPHFQK 153
>gi|297802548|ref|XP_002869158.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
lyrata]
gi|297314994|gb|EFH45417.1| hypothetical protein ARALYDRAFT_491238 [Arabidopsis lyrata subsp.
lyrata]
Length = 144
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+++ VG I R R+W+YIK ++LQDP NK + CD+KL+ I GK RV E+
Sbjct: 78 MQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDIICDEKLKKIFEGKERVGFLEIAK 137
Query: 90 LIKLHF 95
LI HF
Sbjct: 138 LIGPHF 143
>gi|116784051|gb|ABK23195.1| unknown [Picea sitchensis]
gi|148907345|gb|ABR16808.1| unknown [Picea sitchensis]
Length = 129
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
+++F+G S I R ++W YIK +LQDP N+ + CD+ L+SI G+ RV E+
Sbjct: 60 AMQKFLGVSEIPRTKAIKKIWEYIKEKDLQDPANRREIVCDENLKSIFGGRERVGFLEIS 119
Query: 89 ALIKLHFPKD 98
L+K HF K+
Sbjct: 120 GLMKPHFIKE 129
>gi|14423526|gb|AAK62445.1|AF387000_1 putative protein [Arabidopsis thaliana]
Length = 144
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+++ VG I R R+W+YIK ++LQDP NK + CD+KL+ I GK RV E+
Sbjct: 78 MQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAK 137
Query: 90 LIKLHF 95
LI HF
Sbjct: 138 LIGPHF 143
>gi|294463650|gb|ADE77352.1| unknown [Picea sitchensis]
Length = 129
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 16 KLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSI 75
K + L +++ +++F+G S ++R ++W +IK NNLQ+P NK + CD+KL++I
Sbjct: 46 KHSGLFKPLSISPVMKKFLGVSEVARSEAIKKIWEHIKANNLQNPANKTEILCDEKLKAI 105
Query: 76 LMGKSRVELAELPALIKLHFPK 97
L K V + E+ LI HF K
Sbjct: 106 LGQKENVNMFEIAKLISPHFIK 127
>gi|21553903|gb|AAM62986.1| unknown [Arabidopsis thaliana]
Length = 144
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
+++ VG I R R+W+YIK ++LQDP NK + CD+KL+ I GK RV E+
Sbjct: 77 AMQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIA 136
Query: 89 ALIKLHF 95
LI HF
Sbjct: 137 KLIGPHF 143
>gi|15235320|ref|NP_195155.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|4455174|emb|CAB36706.1| putative protein [Arabidopsis thaliana]
gi|7270379|emb|CAB80146.1| putative protein [Arabidopsis thaliana]
gi|24899741|gb|AAN65085.1| putative protein [Arabidopsis thaliana]
gi|332660955|gb|AEE86355.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 144
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+++ VG I R R+W+YIK ++LQDP NK + CD+KL+ I GK RV E+
Sbjct: 78 MQDVVGVPEIPRTQALKRIWAYIKEHDLQDPQNKRDILCDEKLKKIFEGKERVGFLEIAK 137
Query: 90 LIKLHF 95
LI HF
Sbjct: 138 LIGPHF 143
>gi|224103703|ref|XP_002313162.1| predicted protein [Populus trichocarpa]
gi|222849570|gb|EEE87117.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+ +F+G +SR +W++IK +NLQDP+NK + CD+KL+ I G+ +V E+
Sbjct: 74 MADFIGAPEVSRTQALKLIWAHIKEHNLQDPSNKKNIICDEKLKKIFAGRDQVGFLEIAG 133
Query: 90 LIKLHF 95
LI HF
Sbjct: 134 LISPHF 139
>gi|449432287|ref|XP_004133931.1| PREDICTED: uncharacterized protein LOC101218027 [Cucumis sativus]
Length = 157
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
+ ++ + + L F+G S SR ++WSYIK +NLQ+P+NK + CD KL++I
Sbjct: 77 SGILKVTQVSPALSNFLGVSEASRSDAVTQIWSYIKLHNLQNPDNKREIYCDDKLKAIFE 136
Query: 78 GKSRVELAELPALIKLHFPKD 98
G+ +V E+ + HF K+
Sbjct: 137 GREKVGFLEIGKSLARHFVKN 157
>gi|125537942|gb|EAY84337.1| hypothetical protein OsI_05714 [Oryza sativa Indica Group]
Length = 131
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFV-GQSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
V KT K+ ++ V + L F G +SR G +W++IK N LQ+P NK
Sbjct: 37 VTKTEAALAKEKRGIMQPVPVSDALSRFADGAPEMSRAGAVKLIWNHIKANGLQNPANKR 96
Query: 65 VVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+NCD KL+S+ GK +V + E+ L+ HF K
Sbjct: 97 EINCDDKLKSLFAGKDKVGMMEIAKLLSPHFIK 129
>gi|297836126|ref|XP_002885945.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331785|gb|EFH62204.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 141
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 2 LPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
+P+G+ K +P+ + D+V LP I+R R+W+YIK ++LQDP
Sbjct: 61 VPRGIMKPRPVSPE----MQDIVELPE----------IARTQALKRIWAYIKEHDLQDPQ 106
Query: 62 NKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
NK + CD+KL+ I G+ RV E+ LI HF
Sbjct: 107 NKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHF 140
>gi|19698859|gb|AAL91165.1| unknown protein [Arabidopsis thaliana]
gi|24899679|gb|AAN65054.1| unknown protein [Arabidopsis thaliana]
Length = 141
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 2 LPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
+P+G+ K +P+ + D+V LP I+R R+W+YIK ++LQDP
Sbjct: 61 VPRGIMKPRPVSPE----MQDIVELPE----------IARTQALKRIWAYIKEHDLQDPQ 106
Query: 62 NKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
NK + CD+KL+ I G+ RV E+ LI HF
Sbjct: 107 NKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHF 140
>gi|18397658|ref|NP_565366.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|13926219|gb|AAK49586.1|AF370580_1 Unknown protein [Arabidopsis thaliana]
gi|3650030|gb|AAC61285.1| expressed protein [Arabidopsis thaliana]
gi|330251251|gb|AEC06345.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 141
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 2 LPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
+P+G+ K +P+ + D+V LP I+R R+W+YIK ++LQDP
Sbjct: 61 VPRGIMKPRPVSPE----MQDIVELPE----------IARTQALKRIWAYIKEHDLQDPQ 106
Query: 62 NKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
NK + CD+KL+ I G+ RV E+ LI HF
Sbjct: 107 NKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHF 140
>gi|21593713|gb|AAM65680.1| unknown [Arabidopsis thaliana]
Length = 141
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 14/94 (14%)
Query: 2 LPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
+P+G+ K +P+ + D+V LP I+R R+W+YIK ++LQDP
Sbjct: 61 VPRGIMKPRPVSPE----MQDIVELPE----------IARTQALKRIWAYIKEHDLQDPQ 106
Query: 62 NKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
NK + CD+KL+ I G+ RV E+ LI HF
Sbjct: 107 NKREILCDEKLKKIFEGRDRVGFLEIAKLIGPHF 140
>gi|444916606|ref|ZP_21236719.1| DNA topoisomerase III [Cystobacter fuscus DSM 2262]
gi|444711891|gb|ELW52824.1| DNA topoisomerase III [Cystobacter fuscus DSM 2262]
Length = 115
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 36/63 (57%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L E VG + R ++W YIK NNLQDP NK +N D KL+ I GK V + EL
Sbjct: 48 ALAEIVGSKALPRTAVVSKIWEYIKKNNLQDPKNKRQINADDKLKPIFGGKKSVTMFELT 107
Query: 89 ALI 91
AL+
Sbjct: 108 ALV 110
>gi|302796039|ref|XP_002979782.1| hypothetical protein SELMODRAFT_59520 [Selaginella
moellendorffii]
gi|302807501|ref|XP_002985445.1| hypothetical protein SELMODRAFT_49456 [Selaginella
moellendorffii]
gi|300146908|gb|EFJ13575.1| hypothetical protein SELMODRAFT_49456 [Selaginella
moellendorffii]
gi|300152542|gb|EFJ19184.1| hypothetical protein SELMODRAFT_59520 [Selaginella
moellendorffii]
Length = 79
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
+V + + R+F G +SR+ ++W YIK++NLQDP K + D+KL+ L K R+
Sbjct: 5 VVPISAAGRKFFGLQEMSRIDAMKQMWVYIKSHNLQDPEKKRNILPDEKLKQFLSCKDRI 64
Query: 83 ELAELPALIKLHFPK 97
++ E+P L+ HF K
Sbjct: 65 DMTEIPGLLSPHFAK 79
>gi|224056218|ref|XP_002298761.1| predicted protein [Populus trichocarpa]
gi|118485810|gb|ABK94753.1| unknown [Populus trichocarpa]
gi|222846019|gb|EEE83566.1| predicted protein [Populus trichocarpa]
Length = 140
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+ +FVG +SR +W++IK NLQDP+NK + CD+KL+ I G+ +V E+
Sbjct: 73 MADFVGAPEVSRTQVLKLIWAHIKERNLQDPSNKKNIICDEKLKKIFPGRDQVGFLEIAG 132
Query: 90 LIKLHF 95
LI HF
Sbjct: 133 LISPHF 138
>gi|108711237|gb|ABF99032.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|218193805|gb|EEC76232.1| hypothetical protein OsI_13647 [Oryza sativa Indica Group]
gi|222625850|gb|EEE59982.1| hypothetical protein OsJ_12695 [Oryza sativa Japonica Group]
Length = 334
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D +K L ++ TL+EFVG S ++R ++W+YI+ NNLQDP+NK + CD++
Sbjct: 127 DGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKILCDER 186
Query: 72 LRSIL 76
L+ I
Sbjct: 187 LKKIF 191
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
G+S +SR R+W YIK N LQDP+++ + CD+KL+ +L +S + L+
Sbjct: 270 TGESMLSRSDVVKRMWDYIKENKLQDPSDRRKIICDEKLKDLLQVESFNGFT-VSKLLAP 328
Query: 94 HFPK 97
HF K
Sbjct: 329 HFTK 332
>gi|392954835|ref|ZP_10320386.1| DNA topoisomerase domain protein [Hydrocarboniphaga effusa AP103]
gi|391857492|gb|EIT68023.1| DNA topoisomerase domain protein [Hydrocarboniphaga effusa AP103]
Length = 98
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V + L E VG + I+R +VW YIK +NLQD N+ +N D KL+ I GK +V
Sbjct: 25 VTPSAQLAEVVGSAPITRADLTKKVWEYIKKHNLQDATNRRAINADAKLKPIFGGKDQVT 84
Query: 84 LAELPALIKLHFPK 97
+ E+ L+ H K
Sbjct: 85 MFEMTKLVNQHVSK 98
>gi|255565970|ref|XP_002523973.1| brg-1 associated factor, putative [Ricinus communis]
gi|223536700|gb|EEF38341.1| brg-1 associated factor, putative [Ricinus communis]
Length = 134
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQ-SRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQ 70
D P + ++ + L EF+G SR ++W +IK +NLQ+P NK + CD+
Sbjct: 46 DKPVRATGILKAAPVSPALSEFLGGVPEASRTDVVKKIWDHIKLHNLQNPTNKKEIFCDE 105
Query: 71 KLRSILMGKSRVELAELPALIKLHFPK 97
KL++I GK +V E+ L+ HF K
Sbjct: 106 KLKTIFDGKEKVGFLEIGKLLSRHFVK 132
>gi|226532221|ref|NP_001150804.1| LOC100284437 [Zea mays]
gi|195641974|gb|ACG40455.1| SWIb domain-containing protein [Zea mays]
Length = 142
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 9/95 (9%)
Query: 3 PQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNN 62
P+ + T I PK ++ L+ VG I R R+W+YIK +NLQDP++
Sbjct: 57 PKKKRATGITQPKSVS---------PALQAIVGDPVIPRTEVLKRLWAYIKEHNLQDPSD 107
Query: 63 KNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
K VV CD+KL+ + G+ RV E+ L+ F K
Sbjct: 108 KKVVVCDEKLKVLFAGRERVGFLEIAKLLNPLFVK 142
>gi|226504436|ref|NP_001147217.1| SWIb domain-containing protein [Zea mays]
gi|195608642|gb|ACG26151.1| SWIb domain-containing protein [Zea mays]
gi|414587286|tpg|DAA37857.1| TPA: SWIb domain-containing protein [Zea mays]
Length = 80
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 45 FMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALI 91
F+RV SYIK N LQDP N N++ CD+KL++IL+G+S+ +ELP ++
Sbjct: 6 FLRVCSYIKDNKLQDPTNNNILKCDEKLKTILLGRSKATPSELPMIV 52
>gi|195629858|gb|ACG36570.1| SWIb domain-containing protein [Zea mays]
Length = 119
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
P+ A + + + R F G +R ++R VW++IK + LQ+P+NK +NCD L
Sbjct: 34 PRAPAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWTHIKAHGLQNPSNKTEINCDATL 93
Query: 73 RSILMGKSRVELAELPALIKLHFPKD 98
+S+ G+ ++ + E+ L+ HF K+
Sbjct: 94 KSLFGGRDKIGMMEVSKLLSPHFLKN 119
>gi|226510371|ref|NP_001150291.1| LOC100283921 precursor [Zea mays]
gi|195605564|gb|ACG24612.1| SWIb domain-containing protein [Zea mays]
gi|195638128|gb|ACG38532.1| SWIb domain-containing protein [Zea mays]
gi|195653081|gb|ACG46008.1| SWIb domain-containing protein [Zea mays]
gi|223947003|gb|ACN27585.1| unknown [Zea mays]
gi|413935440|gb|AFW69991.1| SWIb domain-containing protein [Zea mays]
Length = 119
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
P+ A + + + R F G +R ++R VW++IK + LQ+P+NK +NCD L
Sbjct: 34 PRAPAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWTHIKAHGLQNPSNKTEINCDATL 93
Query: 73 RSILMGKSRVELAELPALIKLHFPKD 98
+S+ G+ ++ + E+ L+ HF K+
Sbjct: 94 KSLFGGRDKIGMMEVSKLLSPHFLKN 119
>gi|195605408|gb|ACG24534.1| SWIb domain-containing protein [Zea mays]
Length = 116
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
P+ A + + + R F G +R ++R VW++IK + LQ+P+NK +NCD L
Sbjct: 31 PRAPAGITKPMPVSEAFRRFAGGAREVARSEAIKLVWAHIKAHGLQNPSNKTEINCDATL 90
Query: 73 RSILMGKSRVELAELPALIKLHFPKD 98
+S+ G+ ++ + E+ L+ HF K+
Sbjct: 91 KSLFGGRDKIGMMEVSKLLSPHFLKN 116
>gi|357114420|ref|XP_003558998.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Brachypodium distachyon]
Length = 328
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 7 KKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVV 66
K+ D +K L ++ TL+EFVG S ++R ++W+YI+ NNLQDP+NK +
Sbjct: 119 KRKRSDGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKI 178
Query: 67 NCDQKLRSIL 76
CD+ L+ +
Sbjct: 179 LCDETLKKLF 188
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 9 TVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
T ++ P +L++ DL N T G+S +SR +W YIK NNLQDP+++ + C
Sbjct: 246 TGLNAPLQLSD--DLANFIGT-----GESMLSRSDVVKIMWDYIKENNLQDPSDRRKIIC 298
Query: 69 DQKLRSILMGKSRVELAELPALIKLHFPK 97
D+KL+++ S + L+ HF K
Sbjct: 299 DEKLKNLFQVDSFTGFT-VSKLLSPHFTK 326
>gi|357114418|ref|XP_003558997.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Brachypodium distachyon]
Length = 334
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D +K L ++ TL+EFVG S ++R ++W+YI+ NNLQDP+NK + CD+
Sbjct: 130 DGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKILCDET 189
Query: 72 LRSIL 76
L+ +
Sbjct: 190 LKKLF 194
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 9 TVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
T ++ P +L++ DL N T G+S +SR +W YIK NNLQDP+++ + C
Sbjct: 252 TGLNAPLQLSD--DLANFIGT-----GESMLSRSDVVKIMWDYIKENNLQDPSDRRKIIC 304
Query: 69 DQKLRSILMGKSRVELAELPALIKLHFPK 97
D+KL+++ S + L+ HF K
Sbjct: 305 DEKLKNLFQVDSFTGFT-VSKLLSPHFTK 332
>gi|406695566|gb|EKC98869.1| hypothetical protein A1Q2_06840 [Trichosporon asahii var. asahii
CBS 8904]
Length = 227
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L TL FV ++++SR R+W YIK N+LQDPN+K + CD K++++ ++ +
Sbjct: 145 LSDTLSAFVNETKLSRPQTVKRIWDYIKANDLQDPNDKRYILCDDKMKTVFHT-DKLHMF 203
Query: 86 ELPALIKLHFPKDP 99
+ L+ HF +DP
Sbjct: 204 TMNKLLAEHF-RDP 216
>gi|401885774|gb|EJT49862.1| hypothetical protein A1Q1_01014 [Trichosporon asahii var. asahii
CBS 2479]
Length = 251
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L TL FV ++++SR R+W YIK N+LQDPN+K + CD K++++ ++ +
Sbjct: 169 LSDTLSAFVNETKLSRPQTVKRIWDYIKANDLQDPNDKRYILCDDKMKTVFHT-DKLHMF 227
Query: 86 ELPALIKLHFPKDP 99
+ L+ HF +DP
Sbjct: 228 TMNKLLAEHF-RDP 240
>gi|383453556|ref|YP_005367545.1| DNA topoisomerase domain-containing protein [Corallococcus
coralloides DSM 2259]
gi|380728134|gb|AFE04136.1| DNA topoisomerase domain-containing protein [Corallococcus
coralloides DSM 2259]
Length = 110
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + R ++W YIK NNLQD NK +N D KL+ I GK V + E+
Sbjct: 42 AELAAIVGSKALPRTAVVSKIWDYIKKNNLQDAKNKRQINADDKLKPIFGGKKNVTMFEM 101
Query: 88 PALIKLHF 95
AL+ H
Sbjct: 102 TALVNKHL 109
>gi|445499271|ref|ZP_21466126.1| SWIB/MDM2 domain containing protein [Janthinobacterium sp. HH01]
gi|444789266|gb|ELX10814.1| SWIB/MDM2 domain containing protein [Janthinobacterium sp. HH01]
Length = 130
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+TL VG + + R +VW YIK +LQDP N+ ++N D KL+++ GK++V + E+
Sbjct: 62 ATLAAVVGATPLPRTEVTKKVWDYIKKLDLQDPANRRMINADDKLKAVFGGKAQVSMFEM 121
Query: 88 PALIKLHF 95
LI H
Sbjct: 122 TKLISDHL 129
>gi|197105844|ref|YP_002131221.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
gi|196479264|gb|ACG78792.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
Length = 85
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L + VG ++SR RVW YIKTN LQ+P NK + D KL+ I GK RV + E+
Sbjct: 17 AELAQIVGAGQLSRGETVSRVWDYIKTNRLQNPQNKREIVADAKLKPIFGGKDRVSMFEM 76
Query: 88 PALIKLHF 95
+ H
Sbjct: 77 SKHLSGHL 84
>gi|18396594|ref|NP_566210.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
gi|6091763|gb|AAF03473.1|AC009327_12 hypothetical protein [Arabidopsis thaliana]
gi|26450613|dbj|BAC42418.1| unknown protein [Arabidopsis thaliana]
gi|28372894|gb|AAO39929.1| At3g03590 [Arabidopsis thaliana]
gi|332640439|gb|AEE73960.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]
Length = 143
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +F+G SR +W+YIK+++LQ+P +K + CD+ L+ I GK +V E+
Sbjct: 74 LAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISK 133
Query: 90 LIKLHFPK 97
L+ HF K
Sbjct: 134 LLSPHFVK 141
>gi|21593643|gb|AAM65610.1| unknown [Arabidopsis thaliana]
Length = 143
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +F+G SR +W+YIK+++LQ+P +K + CD+ L+ I GK +V E+
Sbjct: 74 LAQFLGTGETSRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISK 133
Query: 90 LIKLHFPK 97
L+ HF K
Sbjct: 134 LLSPHFVK 141
>gi|398835468|ref|ZP_10592830.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. YR522]
gi|398216254|gb|EJN02807.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. YR522]
Length = 157
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L E VG + R +VW YIK +NLQ+P NK ++ D KL++I GK +V + E+
Sbjct: 89 AALGEVVGAKPLPRTEVTKKVWEYIKKHNLQNPENKRNIDADDKLKAIFGGKKQVTMFEM 148
Query: 88 PALIKLHF 95
LI H
Sbjct: 149 TKLISAHL 156
>gi|342887025|gb|EGU86688.1| hypothetical protein FOXB_02794 [Fusarium oxysporum Fo5176]
Length = 262
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL TL E VG++++SR ++W +IK N+LQDPN+K + CD K++++ ++RV++
Sbjct: 187 NLSETLSELVGETQLSRPQVVKKLWEHIKANDLQDPNDKRQIICDDKMQAVFK-QARVDM 245
Query: 85 AELPALIKLHF 95
+ I H
Sbjct: 246 FRMNKDIGSHL 256
>gi|255561659|ref|XP_002521839.1| brg-1 associated factor, putative [Ricinus communis]
gi|223538877|gb|EEF40475.1| brg-1 associated factor, putative [Ricinus communis]
Length = 614
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 5 GVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
G K D K+ L +L L+EF G+S ++R ++W YI+ NNLQDP NK
Sbjct: 401 GATKVDKDVKKRGGGFTKLCSLSPQLQEFTGESELARTEVVKKLWIYIRENNLQDPKNKR 460
Query: 65 VVNCDQKLRSIL 76
+ CD+ LR++
Sbjct: 461 NILCDESLRTLF 472
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D K+ L +L L+EF+G+S+ +R ++W YI+ NNLQDP N+ ++ CD+
Sbjct: 259 DVKKRGGGFTKLCSLSPQLQEFIGESKSARTEVVKKLWVYIRENNLQDPKNRRIILCDES 318
Query: 72 LRSIL 76
LR++
Sbjct: 319 LRALF 323
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ L +L L +FVG S ++R ++W+YI+ N+LQDP N+ ++ CD+ LR
Sbjct: 114 KRGGGFTMLCSLSPQLHKFVGVSELARTEVVKKLWAYIRENDLQDPKNRRIIKCDEALRD 173
Query: 75 IL 76
+
Sbjct: 174 LF 175
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
G++ +SR R+W YIK N+LQDP++K + CD KL+ + S + + L+
Sbjct: 549 TGENELSRADVVKRIWGYIKQNDLQDPSDKRRILCDDKLKELFEVDSFNGFS-VSKLLTA 607
Query: 94 HFPK 97
HF K
Sbjct: 608 HFIK 611
>gi|319794595|ref|YP_004156235.1| swib/mdm2 domain-containing protein [Variovorax paradoxus EPS]
gi|315597058|gb|ADU38124.1| SWIB/MDM2 domain-containing protein [Variovorax paradoxus EPS]
Length = 148
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK NNLQD NK +N D KL+ I GKS+V + EL
Sbjct: 82 ALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIF-GKSQVSMFELA 140
Query: 89 ALIKLH 94
ALI H
Sbjct: 141 ALIGKH 146
>gi|427400619|ref|ZP_18891857.1| hypothetical protein HMPREF9710_01453 [Massilia timonae CCUG 45783]
gi|425720444|gb|EKU83366.1| hypothetical protein HMPREF9710_01453 [Massilia timonae CCUG 45783]
Length = 126
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+TL VG + R +VW YIK+ +LQD N+ ++N D KL+++ GK++V + E+
Sbjct: 58 ATLAAVVGDKPLPRTEVTKKVWDYIKSKDLQDAANRRMINADDKLKAVFGGKAQVSMFEM 117
Query: 88 PALIKLHF 95
LI H
Sbjct: 118 TKLISDHL 125
>gi|297833030|ref|XP_002884397.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata]
gi|297330237|gb|EFH60656.1| hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp.
lyrata]
Length = 145
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +F+G +R +W+YIK+++LQ+P +K + CD+ L+ I GK +V E+
Sbjct: 76 LAQFLGTGETTRTDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISK 135
Query: 90 LIKLHFPK 97
L+ HF K
Sbjct: 136 LLSPHFVK 143
>gi|442318654|ref|YP_007358675.1| DNA topoisomerase domain-containing protein [Myxococcus stipitatus
DSM 14675]
gi|441486296|gb|AGC42991.1| DNA topoisomerase domain-containing protein [Myxococcus stipitatus
DSM 14675]
Length = 105
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L E VG + R ++W+YIK NNLQD NK +N D KL+ I GK V + E+
Sbjct: 37 AALAEIVGSKPLPRTEVVKKLWAYIKKNNLQDAKNKRQINADDKLKPIFGGKKNVTMFEM 96
Query: 88 PALI 91
AL+
Sbjct: 97 TALV 100
>gi|380492995|emb|CCF34198.1| DEK C terminal domain-containing protein [Colletotrichum
higginsianum]
Length = 266
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL L E +G+ ++SR ++W +IK N+LQDP NK + CD K+ +I +SRV++
Sbjct: 191 NLSEPLAELLGEPQLSRPQVVKKLWEHIKGNDLQDPENKRQIRCDDKMHAIFK-QSRVDM 249
Query: 85 AELPALIKLHF 95
++ +I H
Sbjct: 250 FQMNKMIGAHL 260
>gi|395763959|ref|ZP_10444628.1| hypothetical protein JPAM2_19696 [Janthinobacterium lividum PAMC
25724]
Length = 132
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + + R +VW YIK +LQDP N+ ++N D KL+++ GK++V + E+
Sbjct: 66 LAAVVGAAPLPRTEVTKKVWDYIKKLDLQDPANRRMINADDKLKAVFSGKAQVSMFEMTK 125
Query: 90 LIKLHF 95
LI H
Sbjct: 126 LISDHL 131
>gi|224123994|ref|XP_002319215.1| predicted protein [Populus trichocarpa]
gi|222857591|gb|EEE95138.1| predicted protein [Populus trichocarpa]
Length = 126
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 30 LREFVGQ-SRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +F+G SR ++W++IK +NLQ+P NK + CD KL++I G+ +V ++
Sbjct: 56 LGDFLGGVPESSRAEAVKKIWAHIKLHNLQNPTNKKEIICDAKLKAIFDGRDKVGFLDIG 115
Query: 89 ALIKLHFPK 97
L+ HFPK
Sbjct: 116 KLLSAHFPK 124
>gi|426403308|ref|YP_007022279.1| hypothetical protein Bdt_1313 [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859976|gb|AFY01012.1| hypothetical protein Bdt_1313 [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 139
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG S + R ++W+YIK NNLQD NK +N D KL+ + GK++V + ++
Sbjct: 71 AALAAVVGASPLPRTEVVKKLWAYIKKNNLQDAKNKRNINADAKLKEVFGGKTQVSMFDM 130
Query: 88 PALIKLHF 95
L+ H
Sbjct: 131 TKLVSKHL 138
>gi|212722732|ref|NP_001132227.1| uncharacterized protein LOC100193662 [Zea mays]
gi|195621502|gb|ACG32581.1| SWIb domain-containing protein [Zea mays]
Length = 134
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 30 LREFVGQS-RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
R F G + ++R +W++IK + LQ+P K +NCD L+S+ G+ +V + E+
Sbjct: 65 FRRFAGGAPEVARSEAIKLIWAHIKAHGLQNPAKKTEINCDATLKSLFGGRDKVGMLEIN 124
Query: 89 ALIKLHFPKD 98
L+ HFPK+
Sbjct: 125 RLLNTHFPKN 134
>gi|357483029|ref|XP_003611801.1| Upstream activation factor subunit spp27 [Medicago truncatula]
gi|355513136|gb|AES94759.1| Upstream activation factor subunit spp27 [Medicago truncatula]
Length = 361
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L +F+G+S +SR R+W YIK NNLQDP++K + CD+KL+ + S V
Sbjct: 269 LQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQDPSDKRQILCDEKLKELFDVDSFVG 328
Query: 84 LAELPALIKLHFPK 97
+ L+ HF K
Sbjct: 329 FT-VTKLLAPHFIK 341
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
+ +L L+EFVG ++R ++W+YI+ +LQDPNN+ + CD+ LR+ L G +
Sbjct: 135 ICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRA-LFGVDTI 193
Query: 83 ELAELPALIKLH 94
+ ++ ++ H
Sbjct: 194 NMFQMNKVLAKH 205
>gi|194693822|gb|ACF80995.1| unknown [Zea mays]
Length = 134
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 30 LREFVGQS-RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
R F G + ++R +W++IK + LQ+P K +NCD L+S+ G+ +V + E+
Sbjct: 65 FRRFAGGAPEVARSEAIKLIWAHIKAHGLQNPAKKTEINCDATLKSLFGGRDKVGMLEIN 124
Query: 89 ALIKLHFPKD 98
L+ HFPK+
Sbjct: 125 RLLNAHFPKN 134
>gi|42522857|ref|NP_968237.1| hypothetical protein Bd1337 [Bdellovibrio bacteriovorus HD100]
gi|39574053|emb|CAE79230.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
Length = 140
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG S + R ++W+YIK NNLQD NK +N D KL+ + GK++V + ++
Sbjct: 72 AALAAVVGASPLPRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVFGGKTQVSMFDM 131
Query: 88 PALIKLHF 95
L+ H
Sbjct: 132 TKLVSKHL 139
>gi|323331595|gb|EGA73010.1| Uaf30p [Saccharomyces cerevisiae AWRI796]
Length = 211
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ ++R R+W+YIK +NLQ+PNNK + CD+KL +++GKS
Sbjct: 107 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKL-ELILGKS-TN 164
Query: 84 LAELPALIKLHFPKDPK 100
+ E+ ++ H +PK
Sbjct: 165 MFEMHKILASHMA-EPK 180
>gi|224588358|gb|ACN58982.1| SWIB complex BAF60b [uncultured bacterium BLR19]
Length = 133
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+TL + +G S + R ++W YIK N LQD NK ++N D KL+ + GK+++ + +L
Sbjct: 65 ATLADVIGGSPVPRTQVIKKIWDYIKKNGLQDKTNKRMINADAKLKVLFDGKNQISMFDL 124
Query: 88 PALIKLH 94
++ H
Sbjct: 125 AKIVSKH 131
>gi|302809001|ref|XP_002986194.1| hypothetical protein SELMODRAFT_123621 [Selaginella
moellendorffii]
gi|300146053|gb|EFJ12725.1| hypothetical protein SELMODRAFT_123621 [Selaginella
moellendorffii]
Length = 93
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 30 LREFVG--QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
LREF+G +S++SR ++W YIK+N LQDP+++ + CD+KL +L KS L
Sbjct: 21 LREFLGTEESQLSRPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDCKSFNGFGGL 80
Query: 88 PALIKLHF 95
P L++ H
Sbjct: 81 PKLLQAHL 88
>gi|398366129|ref|NP_014938.3| Uaf30p [Saccharomyces cerevisiae S288c]
gi|74645010|sp|Q08747.1|UAF30_YEAST RecName: Full=Upstream activation factor subunit UAF30; AltName:
Full=Upstream activation factor 30 KDa subunit;
Short=p30
gi|1420654|emb|CAA99523.1| unnamed protein product [Saccharomyces cerevisiae]
gi|190407596|gb|EDV10863.1| hypothetical protein SCRG_01676 [Saccharomyces cerevisiae RM11-1a]
gi|256272579|gb|EEU07558.1| Uaf30p [Saccharomyces cerevisiae JAY291]
gi|259149770|emb|CAY86574.1| Uaf30p [Saccharomyces cerevisiae EC1118]
gi|285815167|tpg|DAA11060.1| TPA: Uaf30p [Saccharomyces cerevisiae S288c]
gi|392296622|gb|EIW07724.1| Uaf30p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 228
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ ++R R+W+YIK +NLQ+PNNK + CD+KL +++GKS
Sbjct: 124 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLE-LILGKS-TN 181
Query: 84 LAELPALIKLHFPKDPK 100
+ E+ ++ H +PK
Sbjct: 182 MFEMHKILASHMT-EPK 197
>gi|323302999|gb|EGA56803.1| Uaf30p [Saccharomyces cerevisiae FostersB]
Length = 228
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ ++R R+W+YIK +NLQ+PNNK + CD+KL +++GKS
Sbjct: 124 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLE-LILGKS-TN 181
Query: 84 LAELPALIKLHFPKDPK 100
+ E+ ++ H +PK
Sbjct: 182 MFEMHKILASHMT-EPK 197
>gi|302806513|ref|XP_002985006.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
gi|300147216|gb|EFJ13881.1| hypothetical protein SELMODRAFT_121478 [Selaginella moellendorffii]
Length = 311
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 30 LREFVG--QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
LREF+G +S++SR ++W YIK+N LQDP+++ + CD+KL +L KS L
Sbjct: 239 LREFLGTEESQLSRPEVTKQLWDYIKSNQLQDPSDRRKILCDEKLEKLLDCKSFNGFGGL 298
Query: 88 PALIKLHF 95
P L++ H
Sbjct: 299 PKLLQAHL 306
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L VG + R +W+YI+ +NLQ P +K + CD+ L+ +
Sbjct: 114 QLSDVLEAIVGIPQAPRSQVVKSLWAYIREHNLQVPEDKRKIKCDEALKKVF 165
>gi|282890289|ref|ZP_06298819.1| hypothetical protein pah_c014o183 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|338174189|ref|YP_004650999.1| hypothetical protein PUV_01950 [Parachlamydia acanthamoebae UV-7]
gi|281499946|gb|EFB42235.1| hypothetical protein pah_c014o183 [Parachlamydia acanthamoebae
str. Hall's coccus]
gi|336478547|emb|CCB85145.1| putative uncharacterized protein [Parachlamydia acanthamoebae
UV-7]
Length = 97
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLR 73
PKK + + VNL TL E +G+ ++R +VW YIK + LQD NK +N D KL
Sbjct: 7 PKKNSAFMKPVNLSETLEELIGKGPMARTEVTKKVWEYIKKHKLQDATNKRNINPDAKLA 66
Query: 74 SILMGKSRVELAELPALIKLHF 95
+L +++ ++ + I H
Sbjct: 67 KVLGSNQPIDMFKMTSKIAKHL 88
>gi|151945377|gb|EDN63620.1| upstream activation factor subunit [Saccharomyces cerevisiae
YJM789]
gi|349581446|dbj|GAA26604.1| K7_Uaf30p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 228
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ ++R R+W+YIK +NLQ+PNNK + CD+KL +++GKS
Sbjct: 124 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKL-ELILGKS-TN 181
Query: 84 LAELPALIKLHFPKDPK 100
+ E+ ++ H +PK
Sbjct: 182 MFEMHKILASHMT-EPK 197
>gi|323352202|gb|EGA84739.1| Uaf30p [Saccharomyces cerevisiae VL3]
gi|365762956|gb|EHN04488.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 211
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ ++R R+W+YIK +NLQ+PNNK + CD+KL +++GKS
Sbjct: 107 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKL-ELILGKS-TN 164
Query: 84 LAELPALIKLHFPKDPK 100
+ E+ ++ H +PK
Sbjct: 165 MFEMHKILASHMT-EPK 180
>gi|408396150|gb|EKJ75315.1| hypothetical protein FPSE_04504 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL TL E VG++++SR ++W +IK N+LQDP +K + CD K+ ++ ++RV++
Sbjct: 186 NLSETLSELVGETQLSRPQVVKKLWEHIKANDLQDPKDKRQIICDDKMHAVFK-QARVDM 244
Query: 85 AELPALIKLHF 95
++ I H
Sbjct: 245 FKMNKDIGSHL 255
>gi|389688616|ref|ZP_10178283.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590575|gb|EIM30858.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 103
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + +SR ++W YIKT+ LQ+P NK + DQKL+++ GK++V + E+
Sbjct: 37 LAAVVGSAPLSRPEAVSKIWEYIKTHKLQNPQNKREIMADQKLQAVFGGKNKVSMFEMNK 96
Query: 90 LIKLHF 95
+ H
Sbjct: 97 YLAQHL 102
>gi|322696254|gb|EFY88049.1| SWIB/MDM2 domain protein [Metarhizium acridum CQMa 102]
Length = 261
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL STL + G++++SR R+W +IK N+LQDP +K + CD K++++ ++RV++
Sbjct: 186 NLSSTLSDICGETQLSRPQVVKRLWEHIKANDLQDPADKRQIRCDAKMQAVFK-QARVDM 244
Query: 85 AELPALIKLHF 95
++ I H
Sbjct: 245 FKMNKEIGNHL 255
>gi|398809571|ref|ZP_10568417.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Variovorax sp. CF313]
gi|398085579|gb|EJL76233.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Variovorax sp. CF313]
Length = 147
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK NNLQD NK +N D KL+ I GK +V + EL
Sbjct: 81 ALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIF-GKPQVSMFELA 139
Query: 89 ALIKLH 94
ALI H
Sbjct: 140 ALIGKH 145
>gi|239814872|ref|YP_002943782.1| SWIB/MDM2 domain-containing protein [Variovorax paradoxus S110]
gi|239801449|gb|ACS18516.1| SWIB/MDM2 domain protein [Variovorax paradoxus S110]
Length = 147
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK NNLQD NK +N D KL+ I GK +V + EL
Sbjct: 81 ALAAVVGSTPLPRTAVVSKLWDYIKKNNLQDKANKRNINADAKLKEIF-GKPQVSMFELA 139
Query: 89 ALIKLH 94
ALI H
Sbjct: 140 ALIGKH 145
>gi|406606814|emb|CCH41850.1| Dynamin-binding protein [Wickerhamomyces ciferrii]
Length = 1011
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+NL L EF+G+ ++ R +VW Y+K N+LQ+PN+K + CD K++ + GK +V
Sbjct: 937 LNLSPKLAEFLGEQKLPRTQVVKKVWEYVKENDLQNPNDKREILCDDKMQGVF-GK-KVT 994
Query: 84 LAELPALIKLHFPKD 98
+ +L ++ H KD
Sbjct: 995 MFQLNKVLSQHLYKD 1009
>gi|302893631|ref|XP_003045696.1| hypothetical protein NECHADRAFT_33302 [Nectria haematococca mpVI
77-13-4]
gi|256726623|gb|EEU39983.1| hypothetical protein NECHADRAFT_33302 [Nectria haematococca mpVI
77-13-4]
Length = 1112
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL +TL E VG++++SR ++W +IK N+LQDP +K + CD+K++++ ++RV++
Sbjct: 185 NLSTTLSELVGETQLSRPQVVKKLWEHIKANDLQDPKDKRQIICDEKMQAVFK-QARVDM 243
Query: 85 AELPALIKLHF 95
+ I H
Sbjct: 244 FRMNKDIGNHL 254
>gi|207340922|gb|EDZ69123.1| YOR295Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 228
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ ++R R+W+Y+K +NLQ+PNNK + CD+KL +++GKS
Sbjct: 124 VTLSKSLASLLGEHELTRTEVVRRLWAYVKAHNLQNPNNKKEILCDEKLE-LILGKS-TN 181
Query: 84 LAELPALIKLHFPKDPK 100
+ E+ ++ H +PK
Sbjct: 182 MFEMHKILASHMT-EPK 197
>gi|323307329|gb|EGA60609.1| Uaf30p [Saccharomyces cerevisiae FostersO]
Length = 294
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ ++R R+W+YIK +NLQ+PNNK + CD+KL +++GKS
Sbjct: 124 VTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKL-ELILGKS-TN 181
Query: 84 LAELPALIKLHFPKDPK 100
+ E+ ++ H +PK
Sbjct: 182 MFEMHKILASHMT-EPK 197
>gi|449295490|gb|EMC91512.1| hypothetical protein BAUCODRAFT_127412 [Baudoinia compniacensis
UAMH 10762]
Length = 289
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L+NL L+ +G++++SR R+W+Y+K LQDP++K + CD+ +R + + RV
Sbjct: 212 LLNLSEPLQALLGETQLSRPQTVKRIWAYVKERELQDPSDKREIRCDELMRGVFKSE-RV 270
Query: 83 ELAELPALIKLHF 95
+ ++ ++ HF
Sbjct: 271 NMFKMNKVLAQHF 283
>gi|329901025|ref|ZP_08272670.1| hypothetical protein IMCC9480_929 [Oxalobacteraceae bacterium
IMCC9480]
gi|327549272|gb|EGF33848.1| hypothetical protein IMCC9480_929 [Oxalobacteraceae bacterium
IMCC9480]
Length = 124
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+TL VG + R +VW YIK N LQD NK ++N D KL +I GK +V + E+
Sbjct: 56 ATLAAVVGADPLPRTEVTKKVWEYIKKNALQDDANKRMINGDAKLVAIFGGKKQVSMFEM 115
Query: 88 PALIKLHF 95
LI H
Sbjct: 116 TKLISDHL 123
>gi|198433913|ref|XP_002128458.1| PREDICTED: similar to SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily d, member 1
[Ciona intestinalis]
Length = 467
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L +G SR +W YIKT+NLQD + + ++NCD L L+GKSR+ A
Sbjct: 249 LDSRLARLLGIHTQSRPVIIQGLWQYIKTHNLQDNHEREIINCDPYLEQ-LLGKSRIRFA 307
Query: 86 ELPALIK-LHFPKDP 99
++P L++ L P DP
Sbjct: 308 DVPQLLQPLLHPPDP 322
>gi|332286949|ref|YP_004418860.1| hypothetical protein PT7_3696 [Pusillimonas sp. T7-7]
gi|330430902|gb|AEC22236.1| hypothetical protein PT7_3696 [Pusillimonas sp. T7-7]
Length = 90
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+TL +G + R ++W YIK ++LQDP N+ +N D KLR L GK +V + EL
Sbjct: 23 ATLAAIIGPEAVPRTEVTKKIWDYIKKHDLQDPKNRRNINADDKLRP-LFGKEQVSMFEL 81
Query: 88 PALIKLHF 95
L+ H
Sbjct: 82 TKLVSGHL 89
>gi|260947416|ref|XP_002618005.1| hypothetical protein CLUG_01464 [Clavispora lusitaniae ATCC 42720]
gi|238847877|gb|EEQ37341.1| hypothetical protein CLUG_01464 [Clavispora lusitaniae ATCC 42720]
Length = 201
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L+ +G SR+SR ++W YIK N LQDP +K V CD+KL+++ KS V +
Sbjct: 82 LSPQLQSVLGGSRMSRPQVVKQLWVYIKANGLQDPADKRKVKCDEKLQAVFK-KSTVGMF 140
Query: 86 ELPALIKLHFPKD 98
E+ L+ H KD
Sbjct: 141 EMNKLLGKHLFKD 153
>gi|224103519|ref|XP_002313088.1| predicted protein [Populus trichocarpa]
gi|222849496|gb|EEE87043.1| predicted protein [Populus trichocarpa]
Length = 458
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D K+ L +L L+E VG ++R G ++W+YI+ NLQDP NK + CD+
Sbjct: 248 DVKKRGGGFTKLCSLSPQLQELVGVPELARTGVVKKLWAYIREKNLQDPKNKRNIICDES 307
Query: 72 LRSIL 76
LRSI
Sbjct: 308 LRSIF 312
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K L +L L+ VG ++R ++W+YI+ NNLQDP N+ + CD+ LR+
Sbjct: 112 RKRGGFAKLSSLSPQLQAVVGVPELARTEVVKKLWAYIRENNLQDPKNRKKIKCDEALRA 171
Query: 75 IL 76
+
Sbjct: 172 VF 173
>gi|424777976|ref|ZP_18204933.1| hypothetical protein C660_13442 [Alcaligenes sp. HPC1271]
gi|422887172|gb|EKU29579.1| hypothetical protein C660_13442 [Alcaligenes sp. HPC1271]
Length = 92
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
TL +G + R ++W YIK ++LQDP N+ +N D KLR L GK +V + EL
Sbjct: 26 TLAAVIGSGALPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRP-LFGKDQVSMFELT 84
Query: 89 ALIKLHF 95
L+ H
Sbjct: 85 KLVSAHL 91
>gi|393759562|ref|ZP_10348375.1| hypothetical protein QWA_10586 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393162123|gb|EJC62184.1| hypothetical protein QWA_10586 [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 92
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
TL +G + R ++W YIK ++LQDP N+ +N D KLR L GK +V + EL
Sbjct: 26 TLAAVIGSDALPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRP-LFGKDQVSMFELT 84
Query: 89 ALIKLHF 95
L+ H
Sbjct: 85 KLVSAHL 91
>gi|237746899|ref|ZP_04577379.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378250|gb|EEO28341.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 116
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A + V + L +G + + R ++W YIK NNLQD +N+ ++N D KL+ +
Sbjct: 38 AAFMKPVTPSAVLAAVIGATPVPRTEVTKKIWDYIKQNNLQDKDNRRMINADGKLQPVFG 97
Query: 78 GKSRVELAELPALIKLHF 95
GK +V + E+ L+
Sbjct: 98 GKKQVSMFEMTKLVSAQL 115
>gi|242038013|ref|XP_002466401.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
gi|241920255|gb|EER93399.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
Length = 326
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D K+ L +L L+EFVG S ++R ++W+YI+ NNLQD NN+ + D++
Sbjct: 122 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQNNRRKILPDER 181
Query: 72 LRSIL 76
LR I
Sbjct: 182 LRKIF 186
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 24 VNLPSTLREFVG--QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
+ L L +F+G +S +SR ++W YIK NNLQDP+++ + CD+KL+ L+G
Sbjct: 250 LQLSDDLVKFIGTGESMLSRSDVVKKMWDYIKENNLQDPSDRRKIICDEKLKD-LLGVET 308
Query: 82 VELAELPALIKLHFPK 97
+ L+ HF K
Sbjct: 309 FTGFTVSKLLAPHFTK 324
>gi|217074210|gb|ACJ85465.1| unknown [Medicago truncatula]
Length = 320
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSI 75
+ L L +F+G+S +SR R+W YIK NNLQDP++K + CD+KL+ +
Sbjct: 269 LQLSDALAKFLGESELSRSDVIKRMWDYIKGNNLQDPSDKRQILCDEKLKEL 320
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
+ +L L+EFVG ++R ++W+YI+ +LQDPNN+ + CD+ LR+ L G +
Sbjct: 135 ICSLSPQLQEFVGAPEMARTEVVKQLWAYIREKDLQDPNNRRNIICDEPLRA-LFGVDTI 193
Query: 83 ELAELPALIKLHF 95
+ ++ ++ H
Sbjct: 194 NMFQMNKVLAKHI 206
>gi|367047697|ref|XP_003654228.1| hypothetical protein THITE_2117056 [Thielavia terrestris NRRL 8126]
gi|347001491|gb|AEO67892.1| hypothetical protein THITE_2117056 [Thielavia terrestris NRRL 8126]
Length = 278
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E G+S++SR R+W YIK NNLQDPN+ + CD+K+R++
Sbjct: 205 LSDPLAELCGESQLSRPQVVQRLWKYIKGNNLQDPNDGRQILCDEKMRAVF 255
>gi|171680064|ref|XP_001904978.1| hypothetical protein [Podospora anserina S mat+]
gi|170939658|emb|CAP64885.1| unnamed protein product [Podospora anserina S mat+]
Length = 263
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL L + G+ ++SR ++W +IK N LQDPN+K +NCD+KLR++
Sbjct: 188 NLSEALADVCGEPQLSRPQVVKKLWDHIKANELQDPNDKRNINCDEKLRAVF 239
>gi|120611529|ref|YP_971207.1| SWIB/MDM2 domain-containing protein [Acidovorax citrulli AAC00-1]
gi|326317181|ref|YP_004234853.1| SWIB/MDM2 domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|120589993|gb|ABM33433.1| SWIB/MDM2 domain protein [Acidovorax citrulli AAC00-1]
gi|323374017|gb|ADX46286.1| SWIB/MDM2 domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 101
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + R ++W+YIK NNLQD NK ++N D KL+ + GK +V + E+
Sbjct: 35 ALAAVVGSDPLPRTEIISKLWAYIKANNLQDAANKRMINADAKLKEVF-GKPQVSMFEMA 93
Query: 89 ALIKLH 94
LI H
Sbjct: 94 GLIGKH 99
>gi|242063920|ref|XP_002453249.1| hypothetical protein SORBIDRAFT_04g002500 [Sorghum bicolor]
gi|241933080|gb|EES06225.1| hypothetical protein SORBIDRAFT_04g002500 [Sorghum bicolor]
Length = 131
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 28 STLREFVGQS-RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAE 86
+ L F G + ++R +W++IK + LQDP K +NCD L+S+ G+ R+ + E
Sbjct: 60 AELSRFAGGAPEVARSQAVKLIWAHIKAHGLQDPAKKTEINCDATLKSLFGGRDRIGMLE 119
Query: 87 LPALIKLHFPKD 98
+ L++ HF K+
Sbjct: 120 IMKLLRPHFLKN 131
>gi|171913835|ref|ZP_02929305.1| hypothetical protein VspiD_21690 [Verrucomicrobium spinosum DSM
4136]
Length = 92
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%)
Query: 33 FVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIK 92
VG + I R ++W YIK N LQDP K +N D+ L+++ GK +V + E+ L+
Sbjct: 29 IVGSTPIPRSEVTKKLWDYIKKNGLQDPKKKTNINADEALKAVFGGKKQVTMFEMTKLVS 88
Query: 93 LHF 95
H
Sbjct: 89 AHI 91
>gi|337280016|ref|YP_004619488.1| hypothetical protein Rta_23710 [Ramlibacter tataouinensis TTB310]
gi|334731093|gb|AEG93469.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310]
Length = 146
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + + R ++W+YIK N LQD NK +VN D KL+ I GKS+V + E+
Sbjct: 81 LAAVVGSNPLPRTEVVSKLWAYIKKNKLQDSANKRMVNADAKLKDIF-GKSQVSMFEMAG 139
Query: 90 LIKLH 94
LI H
Sbjct: 140 LIGKH 144
>gi|319763201|ref|YP_004127138.1| swib/mdm2 domain-containing protein [Alicycliphilus denitrificans
BC]
gi|330825395|ref|YP_004388698.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317117762|gb|ADV00251.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
BC]
gi|329310767|gb|AEB85182.1| SWIB/MDM2 domain-containing protein [Alicycliphilus denitrificans
K601]
Length = 93
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK NNLQD NK ++N D KL+ + GK +V + E+
Sbjct: 27 ALAAVVGATPLPRTEIISKLWVYIKANNLQDAANKRMINADAKLKEVF-GKPQVSMFEMA 85
Query: 89 ALIKLH 94
LI H
Sbjct: 86 GLIGKH 91
>gi|415952310|ref|ZP_11557154.1| DNA topoisomerase domain protein [Herbaspirillum frisingense
GSF30]
gi|407757399|gb|EKF67387.1| DNA topoisomerase domain protein [Herbaspirillum frisingense
GSF30]
Length = 76
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L E VG + R +VW YIK N LQ+ NK ++ D KL++I GK +V + E+
Sbjct: 8 AALGEVVGAKPLPRTEVTKKVWEYIKKNKLQNAENKRNIDADDKLKAIFGGKKQVTMFEM 67
Query: 88 PALIKLHF 95
LI H
Sbjct: 68 TKLISAHL 75
>gi|225427597|ref|XP_002270707.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
vinifera]
gi|296085458|emb|CBI29190.3| unnamed protein product [Vitis vinifera]
Length = 115
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 30 LREFVGQ-SRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +F+G + SR +VW +IK +NLQ+P NK + CD+KL++I GK +V E+
Sbjct: 45 LGKFLGGVPQASRSLAIKKVWEHIKLHNLQNPTNKKEICCDEKLKTIFDGKDKVGFLEIA 104
Query: 89 ALIKLHFPK 97
L+ HF K
Sbjct: 105 KLLSPHFVK 113
>gi|389689629|ref|ZP_10178847.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590119|gb|EIM30405.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 86
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
VG S + R +VW YIK+NNLQ+P NK + D+KL+++ GKS+V + E+
Sbjct: 24 VGSSPLPRTEVVSKVWDYIKSNNLQNPENKRELLADEKLQAVFDGKSKVSMFEMNKHFAQ 83
Query: 94 HF 95
H
Sbjct: 84 HL 85
>gi|407921472|gb|EKG14615.1| hypothetical protein MPH_08195 [Macrophomina phaseolina MS6]
Length = 1154
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E +G++++SR C ++W Y+K +LQDPN+K + CD+ +R++
Sbjct: 1081 LSEPLSELLGETQLSRPQCVKKIWEYVKERDLQDPNDKRQIRCDEPMRAVF 1131
>gi|300309713|ref|YP_003773805.1| hypothetical protein Hsero_0372 [Herbaspirillum seropedicae SmR1]
gi|300072498|gb|ADJ61897.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 175
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L E VG + R +VW YIK N LQ+ NK ++ D KL++I GK +V + E+
Sbjct: 107 AALGEVVGAKPLPRTEVTKKVWEYIKKNKLQNAENKRNIDADDKLKAIFGGKKQVTMFEM 166
Query: 88 PALIKLHF 95
LI H
Sbjct: 167 TKLISAHL 174
>gi|221066190|ref|ZP_03542295.1| SWIB/MDM2 domain protein [Comamonas testosteroni KF-1]
gi|264679170|ref|YP_003279077.1| Swib/Mdm2 [Comamonas testosteroni CNB-2]
gi|299533552|ref|ZP_07046928.1| Swib/Mdm2 [Comamonas testosteroni S44]
gi|418529807|ref|ZP_13095735.1| Swib/Mdm2 [Comamonas testosteroni ATCC 11996]
gi|220711213|gb|EED66581.1| SWIB/MDM2 domain protein [Comamonas testosteroni KF-1]
gi|262209683|gb|ACY33781.1| Swib/Mdm2 [Comamonas testosteroni CNB-2]
gi|298718458|gb|EFI59439.1| Swib/Mdm2 [Comamonas testosteroni S44]
gi|371453084|gb|EHN66108.1| Swib/Mdm2 [Comamonas testosteroni ATCC 11996]
Length = 102
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG+ + R ++W YIK NNLQD NK ++N D KL+ + GK +V + E+
Sbjct: 35 AALAAVVGKDPLPRTEIISKLWVYIKANNLQDAANKRMINADAKLKEVF-GKPQVSMFEM 93
Query: 88 PALIKLH 94
LI H
Sbjct: 94 AGLIGKH 100
>gi|356537694|ref|XP_003537360.1| PREDICTED: uncharacterized protein LOC100786835 [Glycine max]
Length = 346
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ L +L L+EF+G ++R ++W+YI+ NLQDPNN+ + CD++LRS
Sbjct: 140 KRGGGFCKLCSLSPQLQEFMGAPEMARTEVVKQLWAYIREKNLQDPNNRRNIICDERLRS 199
Query: 75 IL 76
+
Sbjct: 200 LF 201
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+S ++R R+W YIK NNLQDP++K + CD+KL+ +
Sbjct: 281 TGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELF 323
>gi|197105527|ref|YP_002130904.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
gi|196478947|gb|ACG78475.1| SWIB-domain-containing protein implicated in chromatin remodeling
[Phenylobacterium zucineum HLK1]
Length = 86
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
S L VG ++SR ++W YIK NNLQ+P NK + D KL+ I GK +V + E+
Sbjct: 18 SELAAVVGSGQLSRGETVSKIWDYIKKNNLQNPQNKREIIADAKLKPIFDGKDKVSMFEM 77
Query: 88 PALIKLHF 95
+ H
Sbjct: 78 NKHLAKHL 85
>gi|226228476|ref|YP_002762582.1| hypothetical protein GAU_3070 [Gemmatimonas aurantiaca T-27]
gi|226091667|dbj|BAH40112.1| hypothetical protein GAU_3070 [Gemmatimonas aurantiaca T-27]
Length = 140
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
S L VG + R ++W+YIK NNLQD NK +N D KL+ + GK V + ++
Sbjct: 72 SDLAAIVGDKPLPRTEVVKKLWAYIKKNNLQDKTNKRNINADDKLKVVFGGKKTVSMFDM 131
Query: 88 PALIKLHF 95
L+ H
Sbjct: 132 TKLVSAHL 139
>gi|322705010|gb|EFY96599.1| SWIB/MDM2 domain protein [Metarhizium anisopliae ARSEF 23]
Length = 281
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL STL + G++++SR ++W +IK N+LQDP +K + CD K++++ ++RV++
Sbjct: 206 NLSSTLSDICGETQLSRPQVVKKLWEHIKANDLQDPADKRQIRCDAKMQAVFK-QARVDM 264
Query: 85 AELPALIKLHF 95
++ I H
Sbjct: 265 FKMNKEIGNHL 275
>gi|187251157|ref|YP_001875639.1| hypothetical protein Emin_0747 [Elusimicrobium minutum Pei191]
gi|186971317|gb|ACC98302.1| hypothetical protein Emin_0747 [Elusimicrobium minutum Pei191]
Length = 84
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + + R ++W YIK +NLQD NK ++N D KL+ I GK+++ + E+
Sbjct: 16 AELAAIVGSNPLPRTEVVKKMWDYIKKHNLQDAKNKRMINADDKLKVIFNGKAQISMFEM 75
Query: 88 PALIKLHF 95
I H
Sbjct: 76 SKYISSHL 83
>gi|46122793|ref|XP_385950.1| hypothetical protein FG05774.1 [Gibberella zeae PH-1]
Length = 1121
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL TL E VG++++SR ++W +IK N+LQDP +K + CD K+ ++ ++RV++
Sbjct: 186 NLSETLSELVGETQLSRPQVVKKLWEHIKANDLQDPKDKRQIICDDKMHAVFK-QARVDM 244
Query: 85 AELPALIKLHF 95
++ I H
Sbjct: 245 FKMNKDIGSHL 255
>gi|414873008|tpg|DAA51565.1| TPA: hypothetical protein ZEAMMB73_913346, partial [Zea mays]
Length = 249
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D K+ L +L L+EFVG S ++R ++W+YI+ NNLQD NN+ + D++
Sbjct: 128 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQNNRRKILPDER 187
Query: 72 LRSIL 76
L+ I
Sbjct: 188 LKKIF 192
>gi|323335348|gb|EGA76635.1| Uaf30p [Saccharomyces cerevisiae Vin13]
gi|323346465|gb|EGA80753.1| Uaf30p [Saccharomyces cerevisiae Lalvin QA23]
Length = 219
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ ++R R+W+Y K +NLQ+PNNK + CD+KL +++GKS
Sbjct: 115 VTLSKSLASLLGEHELTRTEVVRRLWAYXKAHNLQNPNNKKEILCDEKL-ELILGKS-TN 172
Query: 84 LAELPALIKLHFPKDPK 100
+ E+ ++ H +PK
Sbjct: 173 MFEMHKILASHMT-EPK 188
>gi|163854990|ref|YP_001629288.1| hypothetical protein Bpet0685 [Bordetella petrii DSM 12804]
gi|293603432|ref|ZP_06685857.1| DNA topoisomerase domain protein [Achromobacter piechaudii ATCC
43553]
gi|311103989|ref|YP_003976842.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
A8]
gi|421485314|ref|ZP_15932873.1| SWIB/MDM2 domain-containing protein [Achromobacter piechaudii
HLE]
gi|422322600|ref|ZP_16403640.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
C54]
gi|423015696|ref|ZP_17006417.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
AXX-A]
gi|163258718|emb|CAP41017.1| conserved hypothetical protein [Bordetella petrii]
gi|292818134|gb|EFF77190.1| DNA topoisomerase domain protein [Achromobacter piechaudii ATCC
43553]
gi|310758678|gb|ADP14127.1| SWIB/MDM2 domain protein [Achromobacter xylosoxidans A8]
gi|317402438|gb|EFV83007.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
C54]
gi|338781199|gb|EGP45592.1| SWIB/MDM2 domain-containing protein [Achromobacter xylosoxidans
AXX-A]
gi|400196233|gb|EJO29210.1| SWIB/MDM2 domain-containing protein [Achromobacter piechaudii
HLE]
Length = 92
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK +NLQD +NK +N D KLR I GK +V + EL
Sbjct: 25 AELAAVIGSEAVPRTEVTKKIWEYIKKHNLQDASNKRNINADAKLRPIF-GKDQVTMFEL 83
Query: 88 PALIKLHF 95
L+ H
Sbjct: 84 TKLVNAHL 91
>gi|399018413|ref|ZP_10720592.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. CF444]
gi|398101529|gb|EJL91745.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Herbaspirillum sp. CF444]
Length = 152
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L E VG + R +VW YIK + LQ+P NK ++ D KL+ + GK +V + E+
Sbjct: 84 AALAEVVGAKPLPRTEVTKKVWEYIKKHKLQNPENKRNIDADDKLKVVFGGKKQVSMFEM 143
Query: 88 PALIKLHF 95
LI H
Sbjct: 144 TKLISGHL 151
>gi|297830558|ref|XP_002883161.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329001|gb|EFH59420.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 463
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 11 IDNPKKLAN--LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
++ PK+ + +L L+ F G + ++R +W YIK NNLQDPN+K ++ C
Sbjct: 253 VEKPKRKGGGGFAKVCSLSPELQAFTGVTELARTEVVKMLWKYIKENNLQDPNDKRIIIC 312
Query: 69 DQKLRSILMGKSRVELAELPALIKLH 94
D+ LRS+ +S + + ++ L+ H
Sbjct: 313 DESLRSLFPFES-INMFQMSKLLTKH 337
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
G+S +SR R+W YIK N+LQDP++K + CD+KL+ + S E L+ H
Sbjct: 399 GESSLSRADVGKRLWEYIKQNDLQDPSDKRRIICDEKLKELFEVDS-FEDTSFSTLLTNH 457
Query: 95 FPK 97
F K
Sbjct: 458 FIK 460
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ + L L + VG S++ R ++W+YI+ N+LQDP ++ + CD+ L S
Sbjct: 111 KRGGGFTKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIRENDLQDPKDRRKIVCDELLHS 170
Query: 75 ILMGKS 80
+ K+
Sbjct: 171 LFRVKT 176
>gi|15835359|ref|NP_297118.1| hypothetical protein TC0745 [Chlamydia muridarum Nigg]
gi|270285535|ref|ZP_06194929.1| hypothetical protein CmurN_03778 [Chlamydia muridarum Nigg]
gi|270289546|ref|ZP_06195848.1| hypothetical protein CmurW_03878 [Chlamydia muridarum Weiss]
gi|301336932|ref|ZP_07225134.1| hypothetical protein CmurM_03835 [Chlamydia muridarum MopnTet14]
gi|7190773|gb|AAF39552.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 86
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VN+ S L VG + R ++W YIK N LQDP NK +N D KL + K V+
Sbjct: 13 VNVSSDLAAIVGTGPMPRTEIIKKIWDYIKQNKLQDPTNKRNINPDDKLAKVFGSKDPVD 72
Query: 84 LAELPALIKLHFPK 97
+ ++ ++ H K
Sbjct: 73 MFQMTKIVSKHIVK 86
>gi|33593966|ref|NP_881610.1| hypothetical protein BP3037 [Bordetella pertussis Tohama I]
gi|33603185|ref|NP_890745.1| hypothetical protein BB4210 [Bordetella bronchiseptica RB50]
gi|384205270|ref|YP_005591009.1| hypothetical protein BPTD_3002 [Bordetella pertussis CS]
gi|408416929|ref|YP_006627636.1| hypothetical protein BN118_3157 [Bordetella pertussis 18323]
gi|410421667|ref|YP_006902116.1| hypothetical protein BN115_3892 [Bordetella bronchiseptica MO149]
gi|410471648|ref|YP_006894929.1| hypothetical protein BN117_0920 [Bordetella parapertussis Bpp5]
gi|412341485|ref|YP_006970240.1| hypothetical protein BN112_4205 [Bordetella bronchiseptica 253]
gi|427816195|ref|ZP_18983259.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|427818864|ref|ZP_18985927.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|427825292|ref|ZP_18992354.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
gi|33564040|emb|CAE43306.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
gi|33568816|emb|CAE34574.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
gi|332383384|gb|AEE68231.1| hypothetical protein BPTD_3002 [Bordetella pertussis CS]
gi|401779099|emb|CCJ64582.1| conserved hypothetical protein [Bordetella pertussis 18323]
gi|408441758|emb|CCJ48253.1| conserved hypothetical protein [Bordetella parapertussis Bpp5]
gi|408448962|emb|CCJ60648.1| conserved hypothetical protein [Bordetella bronchiseptica MO149]
gi|408771319|emb|CCJ56119.1| conserved hypothetical protein [Bordetella bronchiseptica 253]
gi|410567195|emb|CCN24766.1| conserved hypothetical protein [Bordetella bronchiseptica 1289]
gi|410569864|emb|CCN17985.1| conserved hypothetical protein [Bordetella bronchiseptica D445]
gi|410590557|emb|CCN05648.1| conserved hypothetical protein [Bordetella bronchiseptica Bbr77]
Length = 92
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK +NLQD +NK +N D KLR I GK +V + EL
Sbjct: 25 AELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLRPIF-GKDQVTMFEL 83
Query: 88 PALIKLHF 95
L+ H
Sbjct: 84 TKLVNAHL 91
>gi|108762999|ref|YP_629784.1| DNA topoisomerase domain-containing protein [Myxococcus xanthus DK
1622]
gi|338529900|ref|YP_004663234.1| DNA topoisomerase domain-containing protein [Myxococcus fulvus
HW-1]
gi|108466879|gb|ABF92064.1| DNA topoisomerase domain protein [Myxococcus xanthus DK 1622]
gi|337255996|gb|AEI62156.1| DNA topoisomerase domain-containing protein [Myxococcus fulvus
HW-1]
Length = 105
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A+ + + + L E VG + R ++W+YIK LQD NK +N D KL+ I
Sbjct: 27 ASFMKEMTPSAALAEIVGAKPLPRTEVVKKLWAYIKKQGLQDAKNKRQINADDKLKPIFG 86
Query: 78 GKSRVELAELPALI 91
GK V + E+ AL+
Sbjct: 87 GKKSVTMFEMTALV 100
>gi|452980399|gb|EME80160.1| hypothetical protein MYCFIDRAFT_56639 [Pseudocercospora fijiensis
CIRAD86]
Length = 281
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 39/57 (68%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
+NL + L E +G++++SR ++W Y+K +LQ+P +K + CD+K++++ G+S
Sbjct: 204 MNLSAPLSELLGETQLSRPQTVKKIWEYVKERDLQNPKDKRQIMCDEKMQAVFKGES 260
>gi|389688892|ref|ZP_10178457.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388590376|gb|EIM30660.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 90
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
S L VG + + R +VW YIK NNLQ+P NK + D KL+++ GK +V + E+
Sbjct: 22 SELAAVVGSAPLPRTEVVSKVWEYIKANNLQNPANKREILADDKLQAVFGGKDKVSMFEM 81
>gi|389873151|ref|YP_006380570.1| hypothetical protein TKWG_18775 [Advenella kashmirensis WT001]
gi|388538400|gb|AFK63588.1| hypothetical protein TKWG_18775 [Advenella kashmirensis WT001]
Length = 91
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L + +G + R ++W YIK ++LQDP N+ +N D KLR I GK +V + E+
Sbjct: 24 AELAQVIGSDPLPRTEVTKKIWEYIKKHDLQDPKNRRNINADAKLRPIF-GKDQVSMFEM 82
Query: 88 PALIKLHF 95
L+ H
Sbjct: 83 TKLVSTHL 90
>gi|121594745|ref|YP_986641.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. JS42]
gi|222110642|ref|YP_002552906.1| swib/mdm2 domain-containing protein [Acidovorax ebreus TPSY]
gi|120606825|gb|ABM42565.1| SWIB/MDM2 domain protein [Acidovorax sp. JS42]
gi|221730086|gb|ACM32906.1| SWIB/MDM2 domain protein [Acidovorax ebreus TPSY]
Length = 96
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK +NLQD +NK ++N D KL+ + GK +V + E+
Sbjct: 30 ALAAVVGATPLPRTEIISKLWVYIKAHNLQDASNKRMINADAKLKEVF-GKPQVSMFEMA 88
Query: 89 ALIKLH 94
LI H
Sbjct: 89 GLIGKH 94
>gi|226506384|ref|NP_001148210.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|195616714|gb|ACG30187.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 329
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D K+ L +L L+EFVG S ++R ++W+YI+ NNLQD NN+ + D++
Sbjct: 125 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQNNRRKILPDER 184
Query: 72 LRSIL 76
L+ I
Sbjct: 185 LKKIF 189
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
DLV T G+S +SR ++W YIK NNLQDP+++ + CD+KL+ L G
Sbjct: 258 DLVKFIGT-----GESMLSRSDVVKKMWDYIKGNNLQDPSDRRKIICDEKLKD-LFGVET 311
Query: 82 VELAELPALIKLHFPK 97
+ L+ HF K
Sbjct: 312 FTGFTVSKLLAPHFTK 327
>gi|407939544|ref|YP_006855185.1| swib/mdm2 domain-containing protein [Acidovorax sp. KKS102]
gi|407897338|gb|AFU46547.1| swib/mdm2 domain-containing protein [Acidovorax sp. KKS102]
Length = 106
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK NNLQD NK +N D KL+ L GK +V + EL
Sbjct: 40 ALAAVVGSAPLPRTEIISKLWVYIKANNLQDATNKRNINADAKLKE-LFGKPQVSMFELA 98
Query: 89 ALIKLH 94
LI H
Sbjct: 99 GLIGKH 104
>gi|300175265|emb|CBK20576.2| unnamed protein product [Blastocystis hominis]
Length = 100
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L FVGQS + R WSY K NLQDP NK ++ CD+ LR+ L G+ R+
Sbjct: 26 LRLSEELAAFVGQSEMPRPQLVKVFWSYFKEKNLQDPQNKQMILCDEPLRA-LFGEERIR 84
Query: 84 LAELPALIKLH 94
L + H
Sbjct: 85 AFALMKYLNKH 95
>gi|297847268|ref|XP_002891515.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337357|gb|EFH67774.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 372
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK + +L L+ F G ++++R +W YIK NNLQDP++K + CD+ LRS
Sbjct: 246 KKGGGFTKVCSLSPELQAFTGTAQLARTEVVRMLWKYIKENNLQDPSDKRTIICDESLRS 305
Query: 75 IL 76
+
Sbjct: 306 LF 307
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
+ L L +F+G S+++R ++W+YI+ ++LQDP N+ + CD L S+ K+
Sbjct: 105 ICQLSPQLEKFLGTSQLARTEVVKKMWAYIRQHDLQDPKNRRNILCDDSLHSLFRVKT 162
>gi|429861652|gb|ELA36327.1| swib mdm2 domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 268
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL S L E VG+ ++SR ++W +IK N+LQDP NK + CD K+++I +V++
Sbjct: 193 NLSSPLAELVGEQQLSRPQVVKKLWEHIKGNDLQDPENKRQILCDDKMQAIFK-VPKVDM 251
Query: 85 AELPALIKLHF 95
++ +I H
Sbjct: 252 FQMNKMIGSHL 262
>gi|358338848|dbj|GAA57442.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D, partial [Clonorchis sinensis]
Length = 400
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKD 98
+R F +WSYIKT+ LQDPN K+ +NCD L + R+ AE+P+ L+ L P D
Sbjct: 195 TRSQIFYALWSYIKTHKLQDPNEKDFINCDPYLEQVF-NCPRMRFAEIPSRLVPLQQPPD 253
Query: 99 P 99
P
Sbjct: 254 P 254
>gi|378725363|gb|EHY51822.1| hypothetical protein HMPREF1120_00049 [Exophiala dermatitidis
NIH/UT8656]
Length = 283
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 33 FVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALI- 91
F G++++SR R+W+YIK N+LQDP++K + CD K+R I + +V + + LI
Sbjct: 217 FDGETKMSRPEITKRMWAYIKANDLQDPSDKRYIVCDSKMREIFR-QDKVHMFTMTKLIS 275
Query: 92 -KLHFPKD 98
+++ P+D
Sbjct: 276 QQMYNPED 283
>gi|19075845|ref|NP_588345.1| RNA polymerase I upstream activation factor complex subunit Spp27
[Schizosaccharomyces pombe 972h-]
gi|74626867|sp|O74503.1|UAF30_SCHPO RecName: Full=Upstream activation factor subunit spp27; AltName:
Full=Upstream activation factor 27 KDa subunit;
Short=p27; AltName: Full=Upstream activation factor 30
KDa subunit; Short=p30; AltName: Full=Upstream
activation factor subunit uaf30
gi|3581917|emb|CAA20856.1| RNA polymerase I upstream activation factor complex subunit Spp27
[Schizosaccharomyces pombe]
Length = 233
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ L L EF+G ++SR ++W YIK ++LQDPN+K + CD KL+S+
Sbjct: 121 MKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVF 173
>gi|226508644|ref|NP_001147426.1| LOC100281035 [Zea mays]
gi|195611286|gb|ACG27473.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|413932975|gb|AFW67526.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 328
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D K+ L +L L+EFVG S ++R ++W+YI+ NNLQD NN+ + D++
Sbjct: 124 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQNNRRKILPDER 183
Query: 72 LRSIL 76
L+ I
Sbjct: 184 LKKIF 188
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 24 VNLPSTLREFVG--QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
+ L L +F+G +S +SR R+W YIK NNLQDP+++ + CD+KL+ L+G
Sbjct: 252 LQLSDDLMKFIGTGESMLSRSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKD-LLGVET 310
Query: 82 VELAELPALIKLHFPK 97
+ L+ HF K
Sbjct: 311 FTGFTVSKLLAPHFTK 326
>gi|413932976|gb|AFW67527.1| hypothetical protein ZEAMMB73_352797 [Zea mays]
Length = 316
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D K+ L +L L+EFVG S ++R ++W+YI+ NNLQD NN+ + D++
Sbjct: 124 DGKKRGGGFTKLCSLSPALQEFVGASELARTEVVKKLWAYIRENNLQDQNNRRKILPDER 183
Query: 72 LRSIL 76
L+ I
Sbjct: 184 LKKIF 188
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 24 VNLPSTLREFVG--QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
+ L L +F+G +S +SR R+W YIK NNLQDP+++ + CD+KL+ L+G
Sbjct: 240 LQLSDDLMKFIGTGESMLSRSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKD-LLGVET 298
Query: 82 VELAELPALIKLHFPK 97
+ L+ HF K
Sbjct: 299 FTGFTVSKLLAPHFTK 314
>gi|405372157|ref|ZP_11027421.1| DNA topoisomerase III [Chondromyces apiculatus DSM 436]
gi|397088530|gb|EJJ19511.1| DNA topoisomerase III [Myxococcus sp. (contaminant ex DSM 436)]
Length = 105
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A+ + + + L E VG + R ++W+YIK LQD NK +N D KL+ I
Sbjct: 27 ASFMKEMTPSAALAEIVGTKPLPRTEVVKKLWAYIKKQGLQDAKNKRQINADDKLKPIFG 86
Query: 78 GKSRVELAELPALI 91
GK V + E+ AL+
Sbjct: 87 GKKNVTMFEMTALV 100
>gi|160896333|ref|YP_001561915.1| DNA topoisomerase III [Delftia acidovorans SPH-1]
gi|160361917|gb|ABX33530.1| DNA topoisomerase III [Delftia acidovorans SPH-1]
Length = 975
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G+ ++R ++W Y+K NLQDP +K V+ D KLR + GK V + EL
Sbjct: 907 AALAAVIGEGTVARTEVVKKLWEYVKAQNLQDPKDKRVIRADDKLRPVF-GKDSVNMFEL 965
Query: 88 PALIKLHF 95
++ H
Sbjct: 966 AGIVGKHL 973
>gi|333917235|ref|YP_004490967.1| DNA topoisomerase III [Delftia sp. Cs1-4]
gi|333747435|gb|AEF92612.1| DNA topoisomerase III [Delftia sp. Cs1-4]
Length = 970
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G+ ++R ++W Y+K NLQDP +K V+ D KLR + GK V + EL
Sbjct: 903 AALAAVIGEGTVARTEVVKKLWEYVKAQNLQDPKDKRVIRADDKLRPVF-GKDSVNMFEL 961
Query: 88 PALIKLHF 95
++ H
Sbjct: 962 AGIVGKHL 969
>gi|134095941|ref|YP_001101016.1| hypothetical protein HEAR2779 [Herminiimonas arsenicoxydans]
gi|133739844|emb|CAL62895.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
Length = 150
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 27 PST-LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
PST L +G + R +VW YIK LQ+P NK +++ D KL+++ GK +V +
Sbjct: 80 PSTVLAAVIGAAPAPRTEVTKKVWEYIKKFKLQNPENKRMIDADDKLKAVFGGKKQVSMF 139
Query: 86 ELPALIKLH 94
E+ LI H
Sbjct: 140 EMTKLISGH 148
>gi|319779180|ref|YP_004130093.1| DNA topoisomerase III [Taylorella equigenitalis MCE9]
gi|397661420|ref|YP_006502120.1| hypothetical protein KUI_0426 [Taylorella equigenitalis ATCC
35865]
gi|317109204|gb|ADU91950.1| DNA topoisomerase III [Taylorella equigenitalis MCE9]
gi|394349599|gb|AFN35513.1| hypothetical protein KUI_0426 [Taylorella equigenitalis ATCC
35865]
gi|399114652|emb|CCG17447.1| conserved hypothetical protein [Taylorella equigenitalis 14/56]
Length = 97
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + R +VW YIK+ +LQD NN+ +N D KLR I GK +V + E+
Sbjct: 32 LAAVVGDKPLPRTEVTKKVWEYIKSKDLQDANNRRNINADDKLRPIF-GKDQVNMFEMTK 90
Query: 90 LIKLHF 95
LI H
Sbjct: 91 LISAHL 96
>gi|239938969|gb|ACS36127.1| SWIB domain-containing protein [Tigriopus japonicus]
Length = 85
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 16 KLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSI 75
K + L + L L E VG+ SR C ++W+YIK +NLQDP NK D+K+ +
Sbjct: 7 KGSGLTKPMKLSPELAEVVGKKEASRSECIKQLWAYIKKHNLQDPENKQFFKPDKKMAKV 66
Query: 76 LMGKSRVELAELPALIKLH 94
G+ ++ + I H
Sbjct: 67 F-GEEKIRAFSMAKFIGAH 84
>gi|33598274|ref|NP_885917.1| hypothetical protein BPP3764 [Bordetella parapertussis 12822]
gi|33566832|emb|CAE39047.1| conserved hypothetical protein [Bordetella parapertussis]
Length = 92
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK +NLQD +NK +N D KLR I GK +V + EL
Sbjct: 25 AELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLRPIF-GKDQVMMFEL 83
Query: 88 PALIKLHF 95
L+ H
Sbjct: 84 TKLVNAHL 91
>gi|395007049|ref|ZP_10390828.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Acidovorax sp. CF316]
gi|394314936|gb|EJE51781.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Acidovorax sp. CF316]
Length = 110
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK NNLQD NK +N D KL+ L GK +V + EL
Sbjct: 44 ALAAVVGSAPLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKE-LFGKPQVSMFELA 102
Query: 89 ALIKLH 94
LI H
Sbjct: 103 GLIGKH 108
>gi|365089912|ref|ZP_09328420.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. NO-1]
gi|363416605|gb|EHL23709.1| SWIB/MDM2 domain-containing protein [Acidovorax sp. NO-1]
Length = 106
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK NNLQD NK +N D KL+ L GK +V + EL
Sbjct: 40 ALAAVVGSAPLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKE-LFGKPQVSMFELA 98
Query: 89 ALIKLH 94
LI H
Sbjct: 99 GLIGKH 104
>gi|351728366|ref|ZP_08946057.1| SWIB/MDM2 domain-containing protein [Acidovorax radicis N35]
Length = 106
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK NNLQD NK +N D KL+ L GK +V + EL
Sbjct: 40 ALAAVVGSAPLPRTEIISKLWVYIKANNLQDAANKRNINADAKLKE-LFGKPQVSMFELA 98
Query: 89 ALIKLH 94
LI H
Sbjct: 99 GLIGKH 104
>gi|256423726|ref|YP_003124379.1| SWIB/MDM2 domain-containing protein [Chitinophaga pinensis DSM
2588]
gi|256038634|gb|ACU62178.1| SWIB/MDM2 domain protein [Chitinophaga pinensis DSM 2588]
Length = 106
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK +NLQD NK ++N D+KL+ + GK ++ + EL
Sbjct: 38 ADLAAVIGSDPLPRTEITKKIWDYIKEHNLQDAQNKRLINADEKLKKVFNGKDQISMFEL 97
Query: 88 PALIKLH 94
+ H
Sbjct: 98 AKEMNQH 104
>gi|224123268|ref|XP_002330274.1| predicted protein [Populus trichocarpa]
gi|222871309|gb|EEF08440.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 4 QGVKKTVIDN--PKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
+G K +D K+ L +L L+E VG ++R G ++W+YI+ NLQDP
Sbjct: 250 KGRKSAKVDENVKKRGGGFTKLCSLSPQLQELVGVPELARTGVVKKLWAYIREKNLQDPK 309
Query: 62 NKNVVNCDQKLRSIL 76
NK + CD+ LR++
Sbjct: 310 NKRNIICDESLRALF 324
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K L +L L+ VG ++R ++W+YI+ NNLQDP N+ + CD+ LR+
Sbjct: 113 RKRGGFTKLSSLSPQLQAVVGVPELARTEVVKKLWAYIRENNLQDPKNRKKIKCDEALRA 172
Query: 75 IL 76
+
Sbjct: 173 VF 174
>gi|350854401|emb|CCD58302.1| brg-1 associated factor, putative [Schistosoma mansoni]
Length = 230
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L + +R F +W+YIKT+ LQDPN K+ +NCD L + G R+ A
Sbjct: 11 LDSRLARILALHTGTRSQIFYALWNYIKTHRLQDPNEKDFINCDSYLEQVF-GCPRMRFA 69
Query: 86 ELPA-LIKLHFPKDP 99
++P+ L L P DP
Sbjct: 70 DIPSRLAPLQQPPDP 84
>gi|388570247|ref|ZP_10156606.1| DNA topoisomerase III [Hydrogenophaga sp. PBC]
gi|388262529|gb|EIK88160.1| DNA topoisomerase III [Hydrogenophaga sp. PBC]
Length = 980
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G+ +SR ++W YIK N LQDP +K VN D KLR + GK V + E+
Sbjct: 913 AALAAVIGEGPVSRPEVVKKLWDYIKANGLQDPADKRRVNADAKLRPVF-GKDAVTMFEI 971
Query: 88 PALIKLHF 95
L+ H
Sbjct: 972 AGLVGHHL 979
>gi|409408941|ref|ZP_11257376.1| hypothetical protein GWL_45310 [Herbaspirillum sp. GW103]
gi|386432263|gb|EIJ45091.1| hypothetical protein GWL_45310 [Herbaspirillum sp. GW103]
Length = 158
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L E VG + R +VW YIK + LQ+ NK ++ D KL++I GK +V + E+
Sbjct: 90 AALGEVVGAKPLPRTEVTKKVWEYIKKHKLQNAENKRNIDADDKLKAIFGGKKQVTMFEM 149
Query: 88 PALIKLHF 95
LI H
Sbjct: 150 TKLISAHL 157
>gi|367032092|ref|XP_003665329.1| hypothetical protein MYCTH_2308924 [Myceliophthora thermophila ATCC
42464]
gi|347012600|gb|AEO60084.1| hypothetical protein MYCTH_2308924 [Myceliophthora thermophila ATCC
42464]
Length = 264
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL L G+S++SR ++W YIK N LQDPN+K + CD+KL ++
Sbjct: 190 NLSEPLANLCGESQLSRPQVVKKLWDYIKENGLQDPNDKRQIRCDEKLHAVF 241
>gi|398806154|ref|ZP_10565099.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Polaromonas sp. CF318]
gi|398089716|gb|EJL80222.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Polaromonas sp. CF318]
Length = 75
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG + R ++W YIK+ LQD NK ++N D+KLR++ GK++V
Sbjct: 4 LTLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKINKRMINADEKLRAVF-GKAQVS 62
Query: 84 LAELPALIKLH 94
+ E+ LI H
Sbjct: 63 MFEMAGLIGKH 73
>gi|254446854|ref|ZP_05060329.1| SWIB/MDM2 domain superfamily [Verrucomicrobiae bacterium DG1235]
gi|198256279|gb|EDY80588.1| SWIB/MDM2 domain superfamily [Verrucomicrobiae bacterium DG1235]
Length = 77
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + R ++W YIK+N+LQ+P NK + D KL+++ GK +V + E+
Sbjct: 8 AVLSAVVGADPLPRTELTKKLWDYIKSNDLQNPENKREILADAKLKAVFDGKDKVSMFEM 67
Query: 88 PALIKLHFPK 97
L+ H K
Sbjct: 68 TKLVSNHVVK 77
>gi|237749053|ref|ZP_04579533.1| SWIB/MDM2 domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229380415|gb|EEO30506.1| SWIB/MDM2 domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 128
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A + V + L VG + + R +VW YIK NLQD +N+ ++N D KL+ +
Sbjct: 50 AAFMKPVTPTAMLAAIVGAAPLPRTEVTKKVWDYIKKYNLQDKDNRRMINADDKLKPVFG 109
Query: 78 GKSRVELAELPALIKLHF 95
GK +V + E+ L+
Sbjct: 110 GKKQVSMFEMTKLVSAQL 127
>gi|296137220|ref|YP_003644462.1| SWIB/MDM2 domain-containing protein [Thiomonas intermedia K12]
gi|410695094|ref|YP_003625716.1| conserved hypothetical protein [Thiomonas sp. 3As]
gi|294341519|emb|CAZ89936.1| conserved hypothetical protein [Thiomonas sp. 3As]
gi|295797342|gb|ADG32132.1| SWIB/MDM2 domain protein [Thiomonas intermedia K12]
Length = 99
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + + R ++W YIK +NLQD NK ++N D KL+ I GK +V + E+
Sbjct: 32 AHLAAVVGTTPLPRTEVVKKLWEYIKKHNLQDAANKRMINADAKLKPIF-GKDQVSMFEM 90
Query: 88 PALIKLHF 95
L+ H
Sbjct: 91 TKLVSAHL 98
>gi|121605272|ref|YP_982601.1| SWIB/MDM2 domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120594241|gb|ABM37680.1| SWIB/MDM2 domain protein [Polaromonas naphthalenivorans CJ2]
Length = 134
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 20 LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
+ + L L VG + R ++W YIK NNLQD NK ++N D+KL ++ GK
Sbjct: 59 FMKALTLSPELSAVVGDQPLPRTEIVSKLWVYIKANNLQDQANKRMINADKKLLAVF-GK 117
Query: 80 SRVELAELPALIKLH 94
+V + E+ LI H
Sbjct: 118 PQVSMFEMAGLIGKH 132
>gi|17027265|gb|AAL34119.1|AC090713_6 putative parathymosin [Oryza sativa Japonica Group]
Length = 303
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVV 66
D +K L ++ TL+EFVG S ++R ++W+YI+ NNLQDP+NK +
Sbjct: 127 DGKRKGGGFTKLCSISPTLQEFVGASELARTEVVKKLWAYIRENNLQDPSNKRKI 181
>gi|42562626|ref|NP_175375.2| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|63003862|gb|AAY25460.1| At1g49520 [Arabidopsis thaliana]
gi|332194317|gb|AEE32438.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 372
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK + +L L+ F G +++R +W YIK NNLQDP++K + CD+ LRS
Sbjct: 246 KKGGGFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRS 305
Query: 75 IL 76
+
Sbjct: 306 LF 307
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
+ L L +F+G S+++R ++W+YI+ ++LQDP N+ + CD+ L S+ K+
Sbjct: 105 ICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNILCDESLHSLFRVKT 162
>gi|406910432|gb|EKD50456.1| hypothetical protein ACD_62C00538G0002 [uncultured bacterium]
Length = 85
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK + + V L VG I R ++W YIK N LQD NK +N D KL+
Sbjct: 4 KKESAFMKPVQPDDVLAAVVGAKPIPRTEVVKKLWEYIKKNKLQDAKNKRNINADDKLKL 63
Query: 75 ILMGKSRVELAELPALIKLHF 95
+ GK +V + E+ L+ H
Sbjct: 64 VFDGKKQVNMFEMTKLVSKHL 84
>gi|121610030|ref|YP_997837.1| SWIB/MDM2 domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121554670|gb|ABM58819.1| SWIB/MDM2 domain protein [Verminephrobacter eiseniae EF01-2]
Length = 99
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YI+ NNLQD NK +N D KL+ L GK +V + EL
Sbjct: 33 ALAAVVGSAPLPRTQIISKLWIYIRANNLQDAANKQNINADAKLKE-LFGKPQVSMFELA 91
Query: 89 ALIKLH 94
LI H
Sbjct: 92 GLIGKH 97
>gi|160900051|ref|YP_001565633.1| SWIB/MDM2 domain-containing protein [Delftia acidovorans SPH-1]
gi|333913833|ref|YP_004487565.1| SWIB/MDM2 domain-containing protein [Delftia sp. Cs1-4]
gi|160365635|gb|ABX37248.1| SWIB/MDM2 domain protein [Delftia acidovorans SPH-1]
gi|333744033|gb|AEF89210.1| SWIB/MDM2 domain-containing protein [Delftia sp. Cs1-4]
Length = 99
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK N LQD NK ++N D KL+ + GK +V + E+
Sbjct: 33 ALAAVVGSTPLPRTEIISKLWVYIKANKLQDAANKRMINADAKLKEVF-GKPQVSMFEMA 91
Query: 89 ALIKLH 94
LI H
Sbjct: 92 GLIGKH 97
>gi|5430749|gb|AAD43149.1|AC007504_4 Hypothetical Protein [Arabidopsis thaliana]
Length = 386
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK + +L L+ F G +++R +W YIK NNLQDP++K + CD+ LRS
Sbjct: 246 KKGGGFTKVCSLSPELQAFTGTPQLARTEVVKMLWKYIKENNLQDPSDKRTIICDESLRS 305
Query: 75 IL 76
+
Sbjct: 306 LF 307
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
+ L L +F+G S+++R ++W+YI+ ++LQDP N+ + CD+ L S+ K+
Sbjct: 105 ICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNILCDESLHSLFRVKT 162
>gi|341057669|gb|EGS24100.1| hypothetical protein CTHT_0000310 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 240
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL L+E G++++SR ++W YIK +LQDPN+K + CD KL++I
Sbjct: 166 NLSYPLQELTGETQLSRPQVVKKLWDYIKEKDLQDPNDKRQIICDSKLQAIF 217
>gi|241766425|ref|ZP_04764300.1| SWIB/MDM2 domain protein [Acidovorax delafieldii 2AN]
gi|241363386|gb|EER58892.1| SWIB/MDM2 domain protein [Acidovorax delafieldii 2AN]
Length = 110
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YIK +NLQD NK +N D KL+ L GK +V + EL
Sbjct: 44 ALAAVVGSAPLPRTEIISKLWVYIKAHNLQDATNKRNINADAKLKE-LFGKPQVSMFELA 102
Query: 89 ALIKLH 94
LI H
Sbjct: 103 GLIGKH 108
>gi|121606850|ref|YP_984179.1| DNA topoisomerase III [Polaromonas naphthalenivorans CJ2]
gi|120595819|gb|ABM39258.1| DNA topoisomerase III [Polaromonas naphthalenivorans CJ2]
Length = 990
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 27 PS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
PS L +G +++R ++W YIK NLQDP NK +N D KL + GK +V +
Sbjct: 921 PSDALAAIIGSEQVARPQVIKKLWDYIKDQNLQDPANKRAINADAKLLPVF-GKPQVTMF 979
Query: 86 ELPALIKLHF 95
EL ++ H
Sbjct: 980 ELAGIVGKHL 989
>gi|302794588|ref|XP_002979058.1| hypothetical protein SELMODRAFT_418723 [Selaginella moellendorffii]
gi|300153376|gb|EFJ20015.1| hypothetical protein SELMODRAFT_418723 [Selaginella moellendorffii]
Length = 292
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 2 LPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSR--ISRLGCFMRVWSYIKTNNLQD 59
+P+ K D+ + +N + + L+ F+G R +SR RVW YI +LQ+
Sbjct: 187 MPKKKKLDRSDDRPRRSNFLTPYPISEALQSFLGTDRTTMSRAEAVDRVWEYILDKDLQE 246
Query: 60 PNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKD 98
P N NV+ CD KLR L KS +++ L+ HF D
Sbjct: 247 PGNHNVI-CDDKLRE-LFKKSHCSHSKVSQLVNRHFIDD 283
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 19 NLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
+ + L LR G + R +W YI+ NNLQDP+++ ++ C
Sbjct: 99 SFLKAFRLSPELRAVTGHHILRRHEAVQCLWRYIRENNLQDPSDRKMILC 148
>gi|224081550|ref|XP_002306454.1| predicted protein [Populus trichocarpa]
gi|222855903|gb|EEE93450.1| predicted protein [Populus trichocarpa]
Length = 313
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 24 VNLPSTLREFVG--QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
+ L L++F+G +S +SR R+W YIK NNLQDP++K + CD KL+ + S
Sbjct: 241 LQLSDALKKFLGTGESTLSRSDVVKRMWEYIKQNNLQDPSDKRRILCDVKLKELFDIDSF 300
Query: 82 VELAELPALIKLHF 95
+P L+ HF
Sbjct: 301 TGFT-VPKLLSAHF 313
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ L +L L+EF+G ++R ++W+YI+ NLQDP+++ +NCD+ L++
Sbjct: 94 KRGGGFSKLCSLSPQLQEFIGVPHLARTEVVRQLWTYIREKNLQDPSDRRNINCDEPLQA 153
Query: 75 ILMGKSRVELAELPALIKLH 94
L G + + ++ + H
Sbjct: 154 -LFGVDSINMFQMNKALSRH 172
>gi|297620618|ref|YP_003708755.1| hypothetical protein wcw_0377 [Waddlia chondrophila WSU 86-1044]
gi|297375919|gb|ADI37749.1| conserved hypothetical protein [Waddlia chondrophila WSU 86-1044]
gi|337292761|emb|CCB90766.1| putative uncharacterized protein [Waddlia chondrophila 2032/99]
Length = 94
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK + + V + L E VG+ ++R ++W YIK N LQDPNNK + DQKL
Sbjct: 5 KKPSAFMKPVGVSDALAEIVGKGPMARTEVTKKLWDYIKKNKLQDPNNKRNIVPDQKLAK 64
Query: 75 ILMGKSRVELAELPALIKLHF 95
+ +++ ++ + + H
Sbjct: 65 VFGSTQAIDMFKMTSKVSKHL 85
>gi|332529043|ref|ZP_08405008.1| swib/mdm2 domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332041487|gb|EGI77848.1| swib/mdm2 domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 130
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + + R ++W+YIK N LQD NK +N D KL+++ GK+++ + EL +
Sbjct: 65 LAAVVGSTPLPRTEVVSKLWAYIKKNGLQDKVNKRNINADDKLKTVF-GKAQITMFELAS 123
Query: 90 LIKLHF 95
LI H
Sbjct: 124 LIGKHL 129
>gi|91788673|ref|YP_549625.1| hypothetical protein Bpro_2811 [Polaromonas sp. JS666]
gi|91697898|gb|ABE44727.1| SWIB complex, BAF60b [Polaromonas sp. JS666]
Length = 152
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A + + L L VG + R ++W YIK+ LQD NK ++N D+KL+++
Sbjct: 75 AAFMKALTLSPALAAVVGDKPLPRTEIVSKLWVYIKSKGLQDKVNKRMINADEKLKAVF- 133
Query: 78 GKSRVELAELPALIKLH 94
GK +V + E+ LI H
Sbjct: 134 GKPQVSMFEMAGLIGKH 150
>gi|347820345|ref|ZP_08873779.1| SWIB/MDM2 domain-containing protein [Verminephrobacter
aporrectodeae subsp. tuberculatae At4]
Length = 99
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + + R ++W YI+ NNLQD NK +N D KL+ L GK +V + EL
Sbjct: 33 ALAAVVGSAPLPRTEIVSKLWVYIRANNLQDAANKRNINADAKLKE-LFGKPQVSMFELA 91
Query: 89 ALIKLH 94
LI H
Sbjct: 92 GLIGKH 97
>gi|225709960|gb|ACO10826.1| Upstream activation factor subunit UAF30 [Caligus rogercresseyi]
Length = 237
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+NL L VG+ R +VW+YIK NNLQDP+NK CD+KL+ ++ G+ + +
Sbjct: 165 LNLSEDLAAIVGKDVAPRHEVVKQVWAYIKENNLQDPSNKQFAICDEKLKKVI-GEKKFK 223
Query: 84 LAELPALIKLH 94
+ K H
Sbjct: 224 CFGMAKYFKNH 234
>gi|296423386|ref|XP_002841235.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637471|emb|CAZ85426.1| unnamed protein product [Tuber melanosporum]
Length = 492
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
D L S L + + +R G M +W Y++ N LQDP+ + +NCD+ L+ I + R
Sbjct: 275 DRFRLNSALADLLDTKEDTRAGIVMGIWEYVRINGLQDPDERRTINCDENLKKIF-AQDR 333
Query: 82 VELAELPALIKLH-FPKDP 99
+ ++P L H P +P
Sbjct: 334 LYFPQIPELTLAHILPLEP 352
>gi|156095480|ref|XP_001613775.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802649|gb|EDL44048.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 140
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
+ S L+EF+ SR+ W YIK NNLQ+PN K + D+KL+++L K V++
Sbjct: 66 IKSPLKEFLNTDTASRVFVLKYAWKYIKENNLQNPNTKRKIIPDEKLKNVL-EKDEVDML 124
Query: 86 ELPALIKLH 94
E+P L+ H
Sbjct: 125 EVPKLLFRH 133
>gi|225709694|gb|ACO10693.1| Upstream activation factor subunit UAF30 [Caligus rogercresseyi]
Length = 237
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL L VG+ R +VW+YIK NNLQDP+NK CD+KL+ ++ G+ + +
Sbjct: 166 NLSEDLAAIVGKDVAPRHEVVKQVWAYIKENNLQDPSNKQFAICDEKLKKVI-GEKKFKC 224
Query: 85 AELPALIKLH 94
+ K H
Sbjct: 225 FGMAKYFKNH 234
>gi|358380180|gb|EHK17858.1| hypothetical protein TRIVIDRAFT_80752 [Trichoderma virens Gv29-8]
Length = 266
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L TL E G++++SR ++W +IK N+LQDP +K + CD+K++++ +++V++
Sbjct: 193 LSPTLSELCGETQLSRPQVVKKLWEHIKANDLQDPKDKRQIRCDEKMQAVFK-QAKVDMF 251
Query: 86 ELPALIKLHF 95
+ I H
Sbjct: 252 RMNKDIGSHL 261
>gi|391231698|ref|ZP_10267904.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Opitutaceae bacterium TAV1]
gi|391221359|gb|EIP99779.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Opitutaceae bacterium TAV1]
Length = 91
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + R ++W YIK N LQDP K +N D L+++ GK V + E+
Sbjct: 23 ALAAVVGAKPLPRTELTKKLWEYIKKNKLQDPKEKTKINADAALKAVFNGKKTVTMFEMT 82
Query: 89 ALIKLHF 95
L+ H
Sbjct: 83 KLVSGHL 89
>gi|302819723|ref|XP_002991531.1| hypothetical protein SELMODRAFT_429825 [Selaginella moellendorffii]
gi|300140733|gb|EFJ07453.1| hypothetical protein SELMODRAFT_429825 [Selaginella moellendorffii]
Length = 292
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 2 LPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSR--ISRLGCFMRVWSYIKTNNLQD 59
+P+ K D+ + +N + + L+ F+G R +SR RVW YI +LQ+
Sbjct: 187 MPKKKKLDRSDDRPRRSNFLTPYPISEALQSFLGTDRTTMSRAEAVDRVWEYILDKDLQE 246
Query: 60 PNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKD 98
P N NV+ CD KLR L KS +++ L+ HF D
Sbjct: 247 PGNHNVM-CDDKLRE-LFKKSHCSHSKVSQLVNRHFVDD 283
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 2 LPQGVKKTVIDNPKKLA------NLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTN 55
L + ++ T+ N K A + + L LR G + R +W YI+ N
Sbjct: 76 LDEKIQDTLQSNRKSQAGAPGNNSFLKAFRLSPELRAVTGHHILRRHEAVQCLWRYIRDN 135
Query: 56 NLQDPNNKNVVNC 68
NLQDP+++ ++ C
Sbjct: 136 NLQDPSDRKMILC 148
>gi|221056991|ref|XP_002259633.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809705|emb|CAQ40407.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 140
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
+ S L+EF+ SR+ W YIK NNLQ+PN K + D+KL+++L K V++
Sbjct: 66 IKSPLKEFLNTDTASRVFVLKYAWKYIKDNNLQNPNTKRKIIPDEKLKNVL-EKDEVDML 124
Query: 86 ELPALIKLH 94
E+P L+ H
Sbjct: 125 EVPKLLFRH 133
>gi|222112503|ref|YP_002554767.1| DNA topoisomerase III [Acidovorax ebreus TPSY]
gi|221731947|gb|ACM34767.1| DNA topoisomerase III [Acidovorax ebreus TPSY]
Length = 981
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G ++R ++W YIK +NLQDP +K + D KLR++ GK R+ + EL
Sbjct: 914 AQLAAVIGTEPVARPEAVKKMWDYIKAHNLQDPQDKRTIVADDKLRAVF-GKDRIGMFEL 972
Query: 88 PALIKLHF 95
++ H
Sbjct: 973 AGILGQHL 980
>gi|121596274|ref|YP_988170.1| DNA topoisomerase III [Acidovorax sp. JS42]
gi|120608354|gb|ABM44094.1| DNA topoisomerase III [Acidovorax sp. JS42]
Length = 981
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G ++R ++W YIK +NLQDP +K + D KLR++ GK R+ + EL
Sbjct: 914 AQLAAVIGTEPVARPEAVKKMWDYIKAHNLQDPQDKRTIVADDKLRAVF-GKDRIGMFEL 972
Query: 88 PALIKLHF 95
++ H
Sbjct: 973 AGILGQHL 980
>gi|389622149|ref|XP_003708728.1| hypothetical protein MGG_01988 [Magnaporthe oryzae 70-15]
gi|351648257|gb|EHA56116.1| hypothetical protein MGG_01988 [Magnaporthe oryzae 70-15]
gi|440465079|gb|ELQ34421.1| hypothetical protein OOU_Y34scaffold00767g25 [Magnaporthe oryzae
Y34]
gi|440481137|gb|ELQ61753.1| hypothetical protein OOW_P131scaffold01155g25 [Magnaporthe oryzae
P131]
Length = 285
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+L ++L E G+ +SR ++W +IK NNLQDPN+K + CD+K++++ +S + +
Sbjct: 210 HLSASLAEVCGEPTLSRPQVVKKLWEHIKGNNLQDPNDKRQILCDEKMQAVFK-QSSLNM 268
Query: 85 AELPALIKLH-FPKD 98
+ LI H +P D
Sbjct: 269 FAMNKLIGSHLYPVD 283
>gi|340789069|ref|YP_004754534.1| hypothetical protein CFU_3888 [Collimonas fungivorans Ter331]
gi|340554336|gb|AEK63711.1| hypothetical protein CFU_3888 [Collimonas fungivorans Ter331]
Length = 216
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A + + + L VG + + R +VW YIK + LQ+P NK + D+KL+++
Sbjct: 138 AAFMKALTPSAVLAAVVGATPLPRTEVTKKVWEYIKKHKLQNPENKRNIIADEKLKAVFG 197
Query: 78 GKSRVELAELPALIKLHF 95
GK V + E+ LI H
Sbjct: 198 GKKEVSMFEMTKLISDHL 215
>gi|343427276|emb|CBQ70804.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 260
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + G + + R ++W+YIK+NNLQ+ NK + CD KL SI GK V+ E+
Sbjct: 190 LADVCGGNEMPRHAVVKQLWAYIKSNNLQNEGNKRQILCDAKLTSIF-GKEAVDSFEMAK 248
Query: 90 LIKLHFPK 97
LI H K
Sbjct: 249 LIGAHLTK 256
>gi|373854316|ref|ZP_09597114.1| SWIB/MDM2 domain-containing protein [Opitutaceae bacterium TAV5]
gi|372472183|gb|EHP32195.1| SWIB/MDM2 domain-containing protein [Opitutaceae bacterium TAV5]
Length = 77
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 33/67 (49%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L VG + R ++W YIK N LQDP K +N D L+++ GK V + E+
Sbjct: 9 ALAAVVGAKPLPRTELTKKLWEYIKKNKLQDPKEKTKINADAALKAVFNGKKTVTMFEMT 68
Query: 89 ALIKLHF 95
L+ H
Sbjct: 69 KLVSGHL 75
>gi|359359030|gb|AEV40937.1| SWIB/MDM2 domain-containing protein [Oryza punctata]
Length = 391
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W YI+ NNLQDP++K + C+ +LR ++ G ++ ++
Sbjct: 220 LQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDELR-VVFGTDTTDMFKMNK 278
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 279 LLAKHITPLDPK 290
>gi|359359081|gb|AEV40987.1| SWIB/MDM2 domain-containing protein [Oryza minuta]
Length = 389
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W YI+ NNLQDP++K + C+ +LR ++ G ++ ++
Sbjct: 218 LQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDELR-VVFGTDTTDMFKMNK 276
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 277 LLAKHITPLDPK 288
>gi|152982995|ref|YP_001354676.1| hypothetical protein mma_2986 [Janthinobacterium sp. Marseille]
gi|151283072|gb|ABR91482.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 146
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A + V + L +G S R +VW YIK LQ+ NK +++ D+KL+++
Sbjct: 68 AAFMKPVTPSAVLAAVIGASPAPRTEVTKKVWEYIKKFKLQNEANKRMIDADEKLKAVFG 127
Query: 78 GKSRVELAELPALIKLH 94
GK +V + E+ LI H
Sbjct: 128 GKKQVSMFEMTKLISGH 144
>gi|449017562|dbj|BAM80964.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 401
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRI-SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLR 73
+K + L + + L + G +RI SR +W YIK LQDPN++ V+ CD KL+
Sbjct: 299 RKASGLAQPLQVSEALSDICGGARILSRCEVVRLLWEYIKKQQLQDPNDRKVIQCDAKLQ 358
Query: 74 SILMGKSRV 82
+ G++RV
Sbjct: 359 RVFDGETRV 367
>gi|85092741|ref|XP_959523.1| hypothetical protein NCU02204 [Neurospora crassa OR74A]
gi|28920961|gb|EAA30287.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 265
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
NL L+E G++++SR ++W +IK N LQDP++K + CD+KL+++ S
Sbjct: 191 NLSYPLQEVCGEAQLSRPQVVKKLWEHIKANELQDPSDKRQIICDEKLQAVFKQSS 246
>gi|326319333|ref|YP_004237005.1| DNA topoisomerase III [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323376169|gb|ADX48438.1| DNA topoisomerase III [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 982
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK +NLQDP +K +N D KLR + GK + EL
Sbjct: 911 AALAAVIGPEPVGRPEAVKKMWEYIKAHNLQDPKDKRTINADAKLREVF-GKESAGMFEL 969
Query: 88 PALIKLHFPKD 98
++ H D
Sbjct: 970 AGILGKHLQGD 980
>gi|336467600|gb|EGO55764.1| hypothetical protein NEUTE1DRAFT_131437 [Neurospora tetrasperma
FGSC 2508]
gi|350287747|gb|EGZ68983.1| SWIB-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 265
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
NL L+E G++++SR ++W +IK N LQDP++K + CD+KL+++ S
Sbjct: 191 NLSYPLQEVCGEAQLSRPQVVKKLWEHIKANELQDPSDKRQIICDEKLQAVFKQSS 246
>gi|302792146|ref|XP_002977839.1| hypothetical protein SELMODRAFT_176439 [Selaginella moellendorffii]
gi|300154542|gb|EFJ21177.1| hypothetical protein SELMODRAFT_176439 [Selaginella moellendorffii]
Length = 342
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK L L L L+ +G+ + R ++W YI+ +NLQDP NK + CD LR
Sbjct: 131 KKRGGLNKLCRLSPELQAIIGEESLPRTQVVKQLWVYIRAHNLQDPENKRNIICDDPLRE 190
Query: 75 ILMGKSRVELAELPALIKLH 94
L G + ++ ++ L+ H
Sbjct: 191 -LFGTDQTDMFQMNKLLSKH 209
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
G+S ++R R+W YI++N LQDP +K + CD KL+ + S + +P L+ H
Sbjct: 279 GESEVTRSEVVKRIWDYIRSNQLQDPTDKKKILCDNKLQELFECDSFLGFT-MPKLLASH 337
Query: 95 F 95
F
Sbjct: 338 F 338
>gi|223939102|ref|ZP_03630986.1| SWIB/MDM2 domain protein [bacterium Ellin514]
gi|223892262|gb|EEF58739.1| SWIB/MDM2 domain protein [bacterium Ellin514]
Length = 96
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R R+WSYI+ + LQDP K ++N D+ L+ + GK +V + E+
Sbjct: 26 AKLSAIIGSKPLPRSELTKRLWSYIRKHGLQDPKKKTLINADENLKPVFNGKQQVTMLEM 85
Query: 88 PALIKLHFPKD 98
L+ H ++
Sbjct: 86 SKLVFSHIVQE 96
>gi|319796553|ref|YP_004158193.1| DNA topoisomerase iii [Variovorax paradoxus EPS]
gi|315599016|gb|ADU40082.1| DNA topoisomerase III [Variovorax paradoxus EPS]
Length = 989
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 27 PS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
PS +L +G ++R ++W YIK N LQD NK +N D KL+ + GK +V +
Sbjct: 915 PSDSLAAVIGTEPVARTEVIKKLWDYIKANGLQDATNKRAINADAKLKPVF-GKDQVTMF 973
Query: 86 ELPALIKLHF 95
EL ++ H
Sbjct: 974 ELAGIVGKHL 983
>gi|225713048|gb|ACO12370.1| YMR233W [Lepeophtheirus salmonis]
Length = 243
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+NL + L VG+ R +VW+YIK N LQDP NK CD+KL+ ++ G+++ +
Sbjct: 172 LNLSADLAIIVGKDMAPRHEVVKQVWAYIKENKLQDPKNKQFAICDEKLKKVI-GETKFK 230
Query: 84 LAELPALIKLHF 95
+ +K H
Sbjct: 231 CFGMAKYLKSHM 242
>gi|448089569|ref|XP_004196842.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|448093864|ref|XP_004197873.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|359378264|emb|CCE84523.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
gi|359379295|emb|CCE83492.1| Piso0_004068 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
N+ L+ +G + SR ++W+YIK NNLQ+P +K +NCD+KL++ L K V
Sbjct: 123 NVSPELQAIIGVEKCSRPQIVKQLWAYIKDNNLQNPEDKRKINCDEKLQT-LFKKQSVGA 181
Query: 85 AELPALIKLH 94
E+ L+ H
Sbjct: 182 FEMNKLLSSH 191
>gi|85709228|ref|ZP_01040293.1| hypothetical protein NAP1_10123 [Erythrobacter sp. NAP1]
gi|85687938|gb|EAQ27942.1| hypothetical protein NAP1_10123 [Erythrobacter sp. NAP1]
Length = 83
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VNL L VG+ ++R +VW YIK N+LQD +K +N D KL +++ G ++
Sbjct: 12 VNLSGELENVVGKGPMTRAQVTSKVWEYIKANDLQDSKDKRQINPDAKLGAVI-GNDQIS 70
Query: 84 LAELPALIKLHF 95
+ ++ A + H
Sbjct: 71 MFKMTAAVSKHL 82
>gi|297621926|ref|YP_003710063.1| DNA topoisomerase I [Waddlia chondrophila WSU 86-1044]
gi|297377227|gb|ADI39057.1| DNA topoisomerase I [Waddlia chondrophila WSU 86-1044]
Length = 854
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E VG +R VW+YIK+N LQDP NK V+ D+KL + V++
Sbjct: 781 LSPELAEIVGSHEATRGDALKSVWAYIKSNKLQDPENKRVIKPDEKLGKVFGNMEPVDMF 840
Query: 86 ELPALIKLHFPK 97
++ ++ H K
Sbjct: 841 KIAGILSQHIGK 852
>gi|337294185|emb|CCB92169.1| DNA topoisomerase 1 [Waddlia chondrophila 2032/99]
Length = 854
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E VG +R VW+YIK+N LQDP NK V+ D+KL + V++
Sbjct: 781 LSPELAEIVGSHEATRGDALKSVWAYIKSNKLQDPENKRVIKPDEKLGKVFGNMEPVDMF 840
Query: 86 ELPALIKLHFPK 97
++ ++ H K
Sbjct: 841 KIAGILSQHIGK 852
>gi|125591970|gb|EAZ32320.1| hypothetical protein OsJ_16531 [Oryza sativa Japonica Group]
Length = 388
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W YI+ NNLQDP++K + C+ +LR ++ G ++ ++
Sbjct: 217 LQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDELR-VVFGTDTTDMFKMNK 275
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 276 LLAKHITPLDPK 287
>gi|452124017|ref|ZP_21936601.1| hypothetical protein F783_00025 [Bordetella holmesii F627]
gi|452127403|ref|ZP_21939984.1| hypothetical protein H558_00025 [Bordetella holmesii H558]
gi|451923247|gb|EMD73388.1| hypothetical protein F783_00025 [Bordetella holmesii F627]
gi|451926683|gb|EMD76813.1| hypothetical protein H558_00025 [Bordetella holmesii H558]
Length = 92
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK +NLQD +NK +N D KL I GK +V + EL
Sbjct: 25 AELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIF-GKDQVTMFEL 83
Query: 88 PALIKLHF 95
L+ H
Sbjct: 84 TKLVNAHL 91
>gi|359796570|ref|ZP_09299167.1| SWIB/MDM2 domain-containing protein [Achromobacter arsenitoxydans
SY8]
gi|359365533|gb|EHK67233.1| SWIB/MDM2 domain-containing protein [Achromobacter arsenitoxydans
SY8]
Length = 92
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK +NLQD +NK +N D KL I GK +V + EL
Sbjct: 25 AELAAVIGSEAVPRTEVTKKIWEYIKKHNLQDASNKRNINADAKLLPIF-GKDQVTMFEL 83
Query: 88 PALIKLHF 95
L+ H
Sbjct: 84 TKLVNAHL 91
>gi|223944301|gb|ACN26234.1| unknown [Zea mays]
Length = 70
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
G+S +SR R+W YIK NNLQDP+++ + CD+KL+ L+G + L+
Sbjct: 6 TGESMLSRSDVVKRMWDYIKENNLQDPSDRRKIICDEKLKD-LLGVETFTGFTVSKLLAP 64
Query: 94 HFPK 97
HF K
Sbjct: 65 HFTK 68
>gi|375149107|ref|YP_005011548.1| SWIB/MDM2 domain-containing protein [Niastella koreensis GR20-10]
gi|361063153|gb|AEW02145.1| SWIB/MDM2 domain-containing protein [Niastella koreensis GR20-10]
Length = 127
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A + +N L E +G + R ++W YIK N LQD NK ++N D KL+ L
Sbjct: 50 AAFMAPLNPSPVLAEVIGNKPLPRTEIVKKIWEYIKKNKLQDNKNKRMINADSKLKP-LF 108
Query: 78 GKSRVELAELPALIKLH 94
GK ++ + EL ++ H
Sbjct: 109 GKDQISMFELAKVVNKH 125
>gi|187479362|ref|YP_787387.1| hypothetical protein BAV2891 [Bordetella avium 197N]
gi|115423949|emb|CAJ50501.1| conserved hypothetical protein [Bordetella avium 197N]
Length = 92
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK +NLQD +NK +N D KL I GK +V + EL
Sbjct: 25 AELAAVIGSEAVPRTEVTKKIWDYIKKHNLQDASNKRNINADAKLLPIF-GKDQVTMFEL 83
Query: 88 PALIKLHF 95
L+ H
Sbjct: 84 TKLVNAHL 91
>gi|15230276|ref|NP_188538.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332642670|gb|AEE76191.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 462
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 11 IDNPKKLAN--LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
++ PK+ + +L L+ F G + ++R +W YIK NNLQDPN+K + C
Sbjct: 253 VEKPKRKGGGGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIIC 312
Query: 69 DQKLRSIL 76
D+ RS+
Sbjct: 313 DESFRSLF 320
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
G++ +SR R+W YI N+LQDP++K V CD+KL+ + S E + L+ H
Sbjct: 398 GENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDS-FEDTSVSKLLTNH 456
Query: 95 FPK 97
F K
Sbjct: 457 FIK 459
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ + + L L + VG S++ R ++W+YI+ +LQDP ++ + CD+ L S
Sbjct: 111 KRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHS 170
Query: 75 ILMGKS 80
+ K+
Sbjct: 171 LFRVKT 176
>gi|116788399|gb|ABK24867.1| unknown [Picea sitchensis]
Length = 297
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L L L+ +G S +SR ++W YI+ N+LQDP N+ + CD KLRS+ K +
Sbjct: 129 LCGLSPELQSVLGVSELSRTQVVKQLWVYIRENDLQDPQNRRKILCDDKLRSVFR-KDSI 187
Query: 83 ELAELPALIKLHF 95
++ E+ ++ H
Sbjct: 188 DMFEMNKVLSNHI 200
>gi|225165980|ref|ZP_03727735.1| conserved hypothetical protein [Diplosphaera colitermitum TAV2]
gi|224799776|gb|EEG18250.1| conserved hypothetical protein [Diplosphaera colitermitum TAV2]
Length = 90
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + R ++W YIK NNLQD K +N D KL+++ GK V + E+
Sbjct: 23 LAAVVGAKPLPRTELTKKLWEYIKKNNLQDKKVKTNINADDKLKAVFNGKKTVSMFEMTK 82
Query: 90 LIKLHF 95
L+ H
Sbjct: 83 LVSGHL 88
>gi|358400889|gb|EHK50204.1| hypothetical protein TRIATDRAFT_211488 [Trichoderma atroviride IMI
206040]
Length = 1158
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL TL G++++SR ++W +IK N+LQDP +K + CD+K++++ +++V++
Sbjct: 191 NLSETLSALCGETQLSRPQVVKKLWEHIKANDLQDPADKRQIRCDEKMQAVFK-QAKVDM 249
Query: 85 AELPALIKLHF 95
+ I H
Sbjct: 250 FRMNKDIGSHL 260
>gi|389584152|dbj|GAB66885.1| hypothetical protein PCYB_102350 [Plasmodium cynomolgi strain B]
Length = 140
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
+ S L+EF+ SR+ W YIK NNLQ+PN K + D+KL+++L K V++
Sbjct: 66 IKSPLKEFLNTDTASRVFVLKYAWKYIKDNNLQNPNTKRKIIPDEKLKNVL-EKDEVDML 124
Query: 86 ELPALI 91
E+P L+
Sbjct: 125 EVPKLL 130
>gi|9280327|dbj|BAB01706.1| unnamed protein product [Arabidopsis thaliana]
Length = 452
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 11 IDNPKKLAN--LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
++ PK+ + +L L+ F G + ++R +W YIK NNLQDPN+K + C
Sbjct: 241 VEKPKRKGGGGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSIIC 300
Query: 69 DQKLRSIL 76
D+ RS+
Sbjct: 301 DESFRSLF 308
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
G++ +SR R+W YI N+LQDP++K V CD+KL+ + S E + L+ H
Sbjct: 388 GENSLSRADVVKRLWEYINHNDLQDPSDKRRVICDEKLKELFEVDS-FEDTSVSKLLTNH 446
Query: 95 FPK 97
F K
Sbjct: 447 FIK 449
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ + + L L + VG S++ R ++W+YI+ +LQDP ++ + CD+ L S
Sbjct: 97 KRGGGITKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHS 156
Query: 75 ILMGKS 80
+ K+
Sbjct: 157 LFRVKT 162
>gi|406984179|gb|EKE05280.1| hypothetical protein ACD_19C00370G0002 [uncultured bacterium]
Length = 85
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 20 LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L+ + L S L VG+ + R ++W YIK +LQ+P NK + D+KL+ + GK
Sbjct: 9 LMKPMTLSSDLEAVVGKGPMPRSQVVKKIWEYIKKYDLQNPANKRNILADEKLKLLFDGK 68
Query: 80 SRVELAELPALIKLHF 95
V + E+ LI H
Sbjct: 69 GEVTMFEMTKLISKHI 84
>gi|348589734|ref|YP_004874196.1| DNA topoisomerase III [Taylorella asinigenitalis MCE3]
gi|347973638|gb|AEP36173.1| DNA topoisomerase III [Taylorella asinigenitalis MCE3]
gi|399116484|emb|CCG19290.1| conserved hypothetical protein [Taylorella asinigenitalis 14/45]
Length = 97
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + R +VW YIK+ +LQD N+ +N D KLR I GK +V + E+
Sbjct: 32 LAAVVGDKPLPRTEVTKKVWEYIKSKDLQDSANRRNINADDKLRPIF-GKDQVNMFEMTK 90
Query: 90 LIKLHF 95
LI H
Sbjct: 91 LISAHL 96
>gi|89900739|ref|YP_523210.1| SWIB/MDM2 [Rhodoferax ferrireducens T118]
gi|89345476|gb|ABD69679.1| SWIB/MDM2 [Rhodoferax ferrireducens T118]
Length = 144
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + R ++W+YIK N LQD NK ++N D KL+ + GK +V + E+
Sbjct: 77 AALAAVVGVGPLPRTEVVKQLWTYIKKNKLQDAVNKRMINADAKLKEVF-GKVQVSMFEM 135
Query: 88 PALIKLHF 95
LI H
Sbjct: 136 AGLIGKHL 143
>gi|115461154|ref|NP_001054177.1| Os04g0665500 [Oryza sativa Japonica Group]
gi|32488657|emb|CAE03584.1| OSJNBa0087O24.7 [Oryza sativa Japonica Group]
gi|113565748|dbj|BAF16091.1| Os04g0665500 [Oryza sativa Japonica Group]
gi|116308843|emb|CAH65980.1| H1005F08.9 [Oryza sativa Indica Group]
Length = 336
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W YI+ NNLQDP++K + C+ +LR ++ G ++ ++
Sbjct: 165 LQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDELR-VVFGTDTTDMFKMNK 223
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 224 LLAKHITPLDPK 235
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 23 LVNLPS-----TLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+N PS L +F+G + + + +W YIK N L+D +++ CD KL+ L
Sbjct: 256 LINQPSVVISDALAKFIGMEGTVPQDDALRYLWDYIKANQLEDAITGSIL-CDSKLQE-L 313
Query: 77 MGKSRVELAELPALIKLHFPKD 98
G + + L L+ HF K+
Sbjct: 314 FGCESIPSSGLSELLAHHFIKE 335
>gi|301632263|ref|XP_002945210.1| PREDICTED: DNA topoisomerase 3-like [Xenopus (Silurana) tropicalis]
Length = 873
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + + R ++W YIKT+ LQDP +K + D KLR++ GK + EL
Sbjct: 806 AALAAVIGSAAVVRTEAVKKLWDYIKTHKLQDPKDKRTIRADDKLRAVF-GKDSAGMFEL 864
Query: 88 PALIKLHF 95
L+ H
Sbjct: 865 SGLLSAHL 872
>gi|398807622|ref|ZP_10566498.1| DNA topoisomerase III [Variovorax sp. CF313]
gi|398089157|gb|EJL79685.1| DNA topoisomerase III [Variovorax sp. CF313]
Length = 982
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 27 PS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
PS +L +G ++R ++W YIK N LQD NK +N D KL+ + GK +V +
Sbjct: 911 PSDSLAAVIGAEPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLKPVF-GKDQVTMF 969
Query: 86 ELPALIKLHF 95
EL ++ H
Sbjct: 970 ELAGIVGKHL 979
>gi|345567828|gb|EGX50730.1| hypothetical protein AOL_s00054g816 [Arthrobotrys oligospora ATCC
24927]
Length = 289
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L +G++++SR R+W+YIK N+LQD N+K + CD+ LR++
Sbjct: 180 LSTLLGETQLSRPETVKRIWAYIKQNDLQDQNDKRYIICDENLRTVF 226
>gi|452837204|gb|EME39146.1| hypothetical protein DOTSEDRAFT_28327 [Dothistroma septosporum
NZE10]
Length = 293
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+NL L +G++++SR ++W Y+K +LQ+P +K + CD +R++ G S V
Sbjct: 216 MNLSEPLSAMLGETQLSRPQTVKKIWEYVKARDLQNPKDKRQIICDDAMRAVFKGDS-VH 274
Query: 84 LAELPALIKLH-FPKD 98
+ + L+ H +P D
Sbjct: 275 MFTMNKLLASHLYPAD 290
>gi|451998479|gb|EMD90943.1| hypothetical protein COCHEDRAFT_1176551 [Cochliobolus
heterostrophus C5]
Length = 283
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E +G++++SR ++W Y+K +LQDPN+K + CD +R++
Sbjct: 207 LSPALSELLGETQLSRPQTVKKIWEYVKARDLQDPNDKRQIRCDDAMRAVF 257
>gi|302795450|ref|XP_002979488.1| hypothetical protein SELMODRAFT_419232 [Selaginella moellendorffii]
gi|300152736|gb|EFJ19377.1| hypothetical protein SELMODRAFT_419232 [Selaginella moellendorffii]
Length = 320
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK L L L L+ +G+ + R ++W YI+ +NLQDP NK + CD LR
Sbjct: 131 KKRGGLNKLCRLSPELQAIIGEESLPRTQVVKQLWVYIRAHNLQDPENKRNIICDDPLRE 190
Query: 75 ILMGKSRVELAELPALIKLH 94
L G + ++ ++ L+ H
Sbjct: 191 -LFGTDQTDMFQMNKLLSKH 209
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
G+S ++R R+W YI++N LQDP +K + CD KL+ + S + +P L+ H
Sbjct: 257 GESEVTRSEVVKRIWDYIRSNQLQDPTDKKKILCDNKLQELFECDSFLGFT-MPKLLASH 315
Query: 95 F 95
F
Sbjct: 316 F 316
>gi|239818160|ref|YP_002947070.1| DNA topoisomerase III [Variovorax paradoxus S110]
gi|239804737|gb|ACS21804.1| DNA topoisomerase III [Variovorax paradoxus S110]
Length = 980
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 27 PS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
PS +L +G ++R ++W YIK N LQD NK +N D KL+ + GK +V +
Sbjct: 909 PSDSLAAVIGAEPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLKPVF-GKDQVTMF 967
Query: 86 ELPALIKLHF 95
EL ++ H
Sbjct: 968 ELAGIVGKHL 977
>gi|453081821|gb|EMF09869.1| SWIB-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 275
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 35/51 (68%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E +G++++SR ++W+Y+K+ ++QDP++K + CD K+R++
Sbjct: 197 LSEPLAEMLGETQLSRPQTVKQIWAYVKSRDMQDPSDKRQILCDDKMRAVF 247
>gi|332186843|ref|ZP_08388585.1| SWIB/MDM2 domain protein [Sphingomonas sp. S17]
gi|332013176|gb|EGI55239.1| SWIB/MDM2 domain protein [Sphingomonas sp. S17]
Length = 86
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG ++ R +VW YIK NNLQ+P NK + D KL+ + GK + + E+
Sbjct: 20 LGAIVGNEKLPRSQVISKVWDYIKANNLQNPENKREILADDKLKKVF-GKDKCTMFEMNK 78
Query: 90 LIKLHFPK 97
I H K
Sbjct: 79 FISAHLKK 86
>gi|46445705|ref|YP_007070.1| DNA topoisomerase I/SWI domain fusion protein [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399346|emb|CAF22795.1| putative DNA topoisomerase I [Candidatus Protochlamydia amoebophila
UWE25]
Length = 867
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 8 KTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVN 67
K+ D PKK+ + + + LR + S I+R +VW YIKT+ LQD NNK ++
Sbjct: 779 KSTPDKPKKVRQM-PVYQVSPELRGIIEVSEITRGDMTKKVWDYIKTHQLQDTNNKRLII 837
Query: 68 CDQKLRSILMGKSRVELAELPALIKLHFPK 97
D KL + V++ ++ L+ H K
Sbjct: 838 PDAKLSQVFGTTQPVDMFKMATLLSAHLKK 867
>gi|166154674|ref|YP_001654792.1| hypothetical protein CTL0720 [Chlamydia trachomatis 434/Bu]
gi|166155549|ref|YP_001653804.1| hypothetical protein CTLon_0716 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335944|ref|ZP_07224188.1| hypothetical protein CtraL_03925 [Chlamydia trachomatis L2tet1]
gi|339626139|ref|YP_004717618.1| SWIB/MDM2 domain-containing protein [Chlamydia trachomatis L2c]
gi|165930662|emb|CAP04159.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165931537|emb|CAP07113.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339460482|gb|AEJ76985.1| SWIB/MDM2 domain protein [Chlamydia trachomatis L2c]
gi|440526269|emb|CCP51753.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/8200/07]
gi|440536094|emb|CCP61607.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/795]
gi|440540547|emb|CCP66061.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2/25667R]
gi|440542322|emb|CCP67836.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/UCH-2]
gi|440543213|emb|CCP68727.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada2]
gi|440544104|emb|CCP69618.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/LST]
gi|440544994|emb|CCP70508.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams1]
gi|440545884|emb|CCP71398.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/CV204]
gi|440914146|emb|CCP90563.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams2]
gi|440915036|emb|CCP91453.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams3]
gi|440915927|emb|CCP92344.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada1]
gi|440916822|emb|CCP93239.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams4]
gi|440917712|emb|CCP94129.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams5]
Length = 86
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VN+ + L VG + R ++W YIK N+LQDP NK +N D KL + + ++
Sbjct: 13 VNVSADLAAIVGAGPMPRTEIIKKMWDYIKENSLQDPTNKRNINPDDKLAKVFGTEKPID 72
Query: 84 LAELPALIKLHFPK 97
+ ++ ++ H K
Sbjct: 73 MFQMTKMVSQHIIK 86
>gi|452752127|ref|ZP_21951871.1| SWIB-domain-containing protein [alpha proteobacterium JLT2015]
gi|451960647|gb|EMD83059.1| SWIB-domain-containing protein [alpha proteobacterium JLT2015]
Length = 85
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L G+S ++R +W YIK N+LQ+P NK + D KL+ I GK +V
Sbjct: 12 MTLSPELAAVTGKSTMTRAEVVSGMWDYIKRNDLQNPENKREIMADAKLKPIF-GKDKVT 70
Query: 84 LAELPALIKLHFPK 97
+ E+ LI H K
Sbjct: 71 MFEMNKLISPHLSK 84
>gi|451848665|gb|EMD61970.1| hypothetical protein COCSADRAFT_226390 [Cochliobolus sativus
ND90Pr]
Length = 283
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E +G++++SR ++W Y+K +LQDPN+K + CD +R++
Sbjct: 207 LSPALSELLGETQLSRPQTVKKIWEYVKARDLQDPNDKRQIRCDDAMRAVF 257
>gi|444316078|ref|XP_004178696.1| hypothetical protein TBLA_0B03360 [Tetrapisispora blattae CBS 6284]
gi|387511736|emb|CCH59177.1| hypothetical protein TBLA_0B03360 [Tetrapisispora blattae CBS 6284]
Length = 232
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
L +++EF+G+ + R RVW YIK ++LQ+P ++ + CD+K++ I GKS
Sbjct: 133 LSDSMQEFLGEEALPRTQVVKRVWDYIKEHDLQNPKDRRQIICDEKMKPIF-GKS 186
>gi|401408355|ref|XP_003883626.1| hypothetical protein NCLIV_033810 [Neospora caninum Liverpool]
gi|325118043|emb|CBZ53594.1| hypothetical protein NCLIV_033810 [Neospora caninum Liverpool]
Length = 232
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+L L F+G++ SR+ +W YIK +NLQ P NK ++N D LR + K +V +
Sbjct: 154 DLTGPLATFMGKTEASRVEVVKHIWDYIKRHNLQSPENKRMINADSTLRPLFQ-KDQVSM 212
Query: 85 AELPALI 91
EL L+
Sbjct: 213 FELNKLV 219
>gi|162289250|ref|YP_525185.2| DNA topoisomerase III [Rhodoferax ferrireducens T118]
Length = 1002
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK+A+ + + L +G ++R ++W YIK NNLQD NK +N D KL +
Sbjct: 922 KKVASPAAGLQPSAALAAVIGAEPVARPQVIKKLWDYIKANNLQDAVNKRNINADAKLLA 981
Query: 75 ILMGKSRVELAELPALIKLHF 95
+ GK +V + EL ++ H
Sbjct: 982 VF-GKPQVTMFELAGIVGKHL 1001
>gi|218195772|gb|EEC78199.1| hypothetical protein OsI_17819 [Oryza sativa Indica Group]
Length = 389
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W YI+ NNLQDP++K + C+ +LR ++ G ++ ++
Sbjct: 218 LQTIVGETVMSRTQIVKQLWQYIRQNNLQDPDDKRKIICNDELR-VVFGTDTTDMFKMNK 276
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 277 LLAKHITPLDPK 288
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 23 LVNLPS-----TLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+N PS L +F+G + + + +W YIK N L+D +++ CD KL+ L
Sbjct: 309 LINQPSVVISDALAKFIGMEGTVPQDDALRYLWDYIKANQLEDAITGSIL-CDSKLQE-L 366
Query: 77 MGKSRVELAELPALIKLHFPKD 98
G + + L L+ HF K+
Sbjct: 367 FGCESIPSSGLSELLAHHFIKE 388
>gi|196234314|ref|ZP_03133144.1| SWIB/MDM2 domain protein [Chthoniobacter flavus Ellin428]
gi|196221668|gb|EDY16208.1| SWIB/MDM2 domain protein [Chthoniobacter flavus Ellin428]
Length = 97
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
L + VG + R ++W YIK N LQD K +N D L+++ GK V + E+
Sbjct: 28 EALAKVVGSKPLPRTDLTKKLWDYIKKNKLQDAKKKTQINADDALKAVFNGKKSVSMFEM 87
Query: 88 PALIKLHFPK 97
L+ H K
Sbjct: 88 TKLVSGHLTK 97
>gi|398394521|ref|XP_003850719.1| hypothetical protein MYCGRDRAFT_100770 [Zymoseptoria tritici
IPO323]
gi|339470598|gb|EGP85695.1| hypothetical protein MYCGRDRAFT_100770 [Zymoseptoria tritici
IPO323]
Length = 297
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++L L +G++++SR R+W+Y+K +LQ+P +K +NCD+ +R++
Sbjct: 215 MHLSEPLAAMLGENQLSRPQTVKRIWAYVKERDLQEPTDKRQINCDEAMRAVF 267
>gi|440536987|emb|CCP62501.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/440/LN]
gi|440537876|emb|CCP63390.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/1322/p2]
gi|440538766|emb|CCP64280.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/115]
gi|440539655|emb|CCP65169.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/224]
gi|440541435|emb|CCP66949.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L3/404/LN]
Length = 86
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VN+ + L VG + R ++W YIK N LQDP NK +N D KL + + ++
Sbjct: 13 VNVSADLAAIVGAGPMPRTEIIKKMWDYIKENGLQDPTNKRNINPDDKLAKVFGTEKPID 72
Query: 84 LAELPALIKLHFPK 97
+ ++ ++ H K
Sbjct: 73 MFQMTKMVSQHIIK 86
>gi|255348833|ref|ZP_05380840.1| hypothetical protein Ctra70_02450 [Chlamydia trachomatis 70]
gi|255503373|ref|ZP_05381763.1| hypothetical protein Ctra7_02460 [Chlamydia trachomatis 70s]
gi|255507051|ref|ZP_05382690.1| hypothetical protein CtraD_02435 [Chlamydia trachomatis D(s)2923]
gi|385241838|ref|YP_005809678.1| hypothetical protein E11023_02415 [Chlamydia trachomatis E/11023]
gi|385245445|ref|YP_005814268.1| hypothetical protein E150_02430 [Chlamydia trachomatis E/150]
gi|386262817|ref|YP_005816096.1| hypothetical protein SW2_4691 [Chlamydia trachomatis Sweden2]
gi|389858156|ref|YP_006360398.1| hypothetical protein FSW4_4691 [Chlamydia trachomatis F/SW4]
gi|389859032|ref|YP_006361273.1| hypothetical protein ESW3_4691 [Chlamydia trachomatis E/SW3]
gi|389859908|ref|YP_006362148.1| hypothetical protein FSW5_4691 [Chlamydia trachomatis F/SW5]
gi|289525505|emb|CBJ14982.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296435061|gb|ADH17239.1| hypothetical protein E150_02430 [Chlamydia trachomatis E/150]
gi|296438781|gb|ADH20934.1| hypothetical protein E11023_02415 [Chlamydia trachomatis E/11023]
gi|380249228|emb|CCE14520.1| conserved hypothetical protein [Chlamydia trachomatis F/SW5]
gi|380250103|emb|CCE13631.1| conserved hypothetical protein [Chlamydia trachomatis F/SW4]
gi|380250981|emb|CCE12742.1| conserved hypothetical protein [Chlamydia trachomatis E/SW3]
gi|440527167|emb|CCP52651.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD1]
gi|440529841|emb|CCP55325.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE4]
gi|440530740|emb|CCP56224.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE8]
gi|440531631|emb|CCP57141.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis F/SotonF3]
gi|440535208|emb|CCP60718.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/Bour]
Length = 86
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VN+ + L VG + R ++W YIK N+LQDP NK +N D KL + + ++
Sbjct: 13 VNVSADLAAIVGAGPMPRTEIIKKMWDYIKKNSLQDPTNKRNINPDDKLAKVFGTEKPID 72
Query: 84 LAELPALIKLHFPK 97
+ ++ ++ H K
Sbjct: 73 MFQMTKMVSQHIIK 86
>gi|89347451|gb|ABD71654.1| DNA topoisomerase III [Rhodoferax ferrireducens T118]
Length = 1017
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK+A+ + + L +G ++R ++W YIK NNLQD NK +N D KL +
Sbjct: 937 KKVASPAAGLQPSAALAAVIGAEPVARPQVIKKLWDYIKANNLQDAVNKRNINADAKLLA 996
Query: 75 ILMGKSRVELAELPALIKLHF 95
+ GK +V + EL ++ H
Sbjct: 997 VF-GKPQVTMFELAGIVGKHL 1016
>gi|393718831|ref|ZP_10338758.1| SWIB/MDM2 domain-containing protein [Sphingomonas echinoides ATCC
14820]
Length = 93
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 9 TVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
T + K + + + L VG ++ R +VW+YIK +NLQ+P NK +
Sbjct: 6 TAKSDAPKTGGIFAPITPSAELGAIVGTDKLPRSEVISKVWAYIKAHNLQNPENKREIVA 65
Query: 69 DQKLRSILMGKSRVELAEL 87
D+KL+ + GK +V + E+
Sbjct: 66 DEKLKKVF-GKDKVTMFEM 83
>gi|15605187|ref|NP_219973.1| SWIB (YM74) complex protein [Chlamydia trachomatis D/UW-3/CX]
gi|76789196|ref|YP_328282.1| SwiB complex protein [Chlamydia trachomatis A/HAR-13]
gi|237802888|ref|YP_002888082.1| hypothetical protein JALI_4621 [Chlamydia trachomatis
B/Jali20/OT]
gi|237804810|ref|YP_002888964.1| hypothetical protein CTB_4621 [Chlamydia trachomatis
B/TZ1A828/OT]
gi|255311272|ref|ZP_05353842.1| hypothetical protein Ctra62_02400 [Chlamydia trachomatis 6276]
gi|255317574|ref|ZP_05358820.1| hypothetical protein Ctra6_02395 [Chlamydia trachomatis 6276s]
gi|376282469|ref|YP_005156295.1| hypothetical protein CTR_4621 [Chlamydia trachomatis A2497]
gi|385239983|ref|YP_005807825.1| hypothetical protein G9768_02400 [Chlamydia trachomatis G/9768]
gi|385240907|ref|YP_005808748.1| hypothetical protein G11222_02405 [Chlamydia trachomatis G/11222]
gi|385242761|ref|YP_005810600.1| hypothetical protein CTG9301_02410 [Chlamydia trachomatis G/9301]
gi|385243668|ref|YP_005811514.1| hypothetical protein CTDEC_0460 [Chlamydia trachomatis D-EC]
gi|385244548|ref|YP_005812392.1| hypothetical protein CTDLC_0460 [Chlamydia trachomatis D-LC]
gi|385246370|ref|YP_005815192.1| hypothetical protein G11074_02405 [Chlamydia trachomatis G/11074]
gi|385270160|ref|YP_005813320.1| hypothetical protein [Chlamydia trachomatis A2497]
gi|3328894|gb|AAC68060.1| SWIB (YM74) complex protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167726|gb|AAX50734.1| SwiB complex protein [Chlamydia trachomatis A/HAR-13]
gi|231273110|emb|CAX10023.1| conserved hypothetical protein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274122|emb|CAX10916.1| conserved hypothetical protein [Chlamydia trachomatis
B/Jali20/OT]
gi|296435988|gb|ADH18162.1| hypothetical protein G9768_02400 [Chlamydia trachomatis G/9768]
gi|296436915|gb|ADH19085.1| hypothetical protein G11222_02405 [Chlamydia trachomatis G/11222]
gi|296437849|gb|ADH20010.1| hypothetical protein G11074_02405 [Chlamydia trachomatis G/11074]
gi|297140349|gb|ADH97107.1| hypothetical protein CTG9301_02410 [Chlamydia trachomatis G/9301]
gi|297748591|gb|ADI51137.1| hypothetical protein CTDEC_0460 [Chlamydia trachomatis D-EC]
gi|297749471|gb|ADI52149.1| hypothetical protein CTDLC_0460 [Chlamydia trachomatis D-LC]
gi|347975300|gb|AEP35321.1| hypothetical protein CTO_0503 [Chlamydia trachomatis A2497]
gi|371908499|emb|CAX09129.1| conserved hypothetical protein [Chlamydia trachomatis A2497]
gi|438690393|emb|CCP49650.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/7249]
gi|438691478|emb|CCP48752.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/5291]
gi|438692851|emb|CCP47853.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/363]
gi|440525382|emb|CCP50633.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis K/SotonK1]
gi|440528059|emb|CCP53543.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD5]
gi|440528949|emb|CCP54433.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD6]
gi|440532524|emb|CCP58034.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/SotonG1]
gi|440533417|emb|CCP58927.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534311|emb|CCP59821.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa3]
Length = 86
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VN+ + L VG + R ++W YIK N LQDP NK +N D KL + + ++
Sbjct: 13 VNVSADLAAIVGAGPMPRTEIIKKMWDYIKKNGLQDPTNKRNINPDDKLAKVFGTEKPID 72
Query: 84 LAELPALIKLHFPK 97
+ ++ ++ H K
Sbjct: 73 MFQMTKMVSQHIIK 86
>gi|212536546|ref|XP_002148429.1| C2H2 finger domain protein, putative [Talaromyces marneffei ATCC
18224]
gi|210070828|gb|EEA24918.1| C2H2 finger domain protein, putative [Talaromyces marneffei ATCC
18224]
Length = 1128
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 24 VNLPSTLREFV-GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
+NL L E + G+ +SR RVW YIK N+LQDP+++ + CD ++R ++ + RV
Sbjct: 203 LNLSPALSELLDGEVALSRPQTVKRVWEYIKANDLQDPSDRRQIRCDDRMR-LVFKQDRV 261
Query: 83 ELAELPALIKLHF 95
+ + ++ L+
Sbjct: 262 HMFTMTKILNLNL 274
>gi|296004558|ref|XP_002808698.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|225631685|emb|CAX63969.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 131
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
+ S L+EF+ SR+ W YIK NNLQ+PN K + D KL+ +L K V++
Sbjct: 57 IKSPLKEFLNADTASRVFVLKYAWKYIKDNNLQNPNMKRKIIPDDKLKQVL-DKDEVDIL 115
Query: 86 ELPALIKLH 94
E+P L+ H
Sbjct: 116 EVPKLLFKH 124
>gi|449527809|ref|XP_004170902.1| PREDICTED: uncharacterized protein LOC101226406, partial [Cucumis
sativus]
Length = 225
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ L +L L+EF+G ++R ++W++I+ NNLQDP+N+ + CD+ L++
Sbjct: 6 KRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKA 65
Query: 75 ILMGKSRVELAELPALIKLH 94
L G + + + ++ + H
Sbjct: 66 -LFGVNSINMFQMNKALSKH 84
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ + R R+W YIK NNLQDP++K + CD++L+ +
Sbjct: 160 TGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELF 202
>gi|380092861|emb|CCC09614.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 267
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
NL L+E G++++SR ++W +IK N LQDP++K + CD KL+++ S
Sbjct: 191 NLSYPLQEVCGEAQLSRPQVVKKLWEHIKANELQDPSDKRQILCDDKLQAVFKQSS 246
>gi|356496860|ref|XP_003517283.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Glycine max]
Length = 331
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ L +L L+EF+ ++R ++W YI+ NLQDPNN+ + CD++LRS
Sbjct: 125 KRGGGFCKLCSLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRS 184
Query: 75 IL 76
+
Sbjct: 185 LF 186
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+S ++R R+W YIK NNLQDP++K + CD+KL+ +
Sbjct: 266 TGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELF 308
>gi|224029061|gb|ACN33606.1| unknown [Zea mays]
gi|413919845|gb|AFW59777.1| hypothetical protein ZEAMMB73_047514 [Zea mays]
Length = 356
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W+YI+ NNLQDP++K + C+ +LR ++ ++ ++
Sbjct: 185 LQTIVGETAMSRTQIVKQLWAYIRQNNLQDPDDKRKIICNDELR-VVFETDNTDMFKMNK 243
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 244 LLAKHITPLDPK 255
Score = 34.3 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+W YIK N L+D N++++ CD KL+ L G + ++ L ++ HF K
Sbjct: 307 LWDYIKANQLEDVINESIL-CDSKLQE-LFGCESIPMSGLSEMLGHHFIK 354
>gi|356496858|ref|XP_003517282.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Glycine max]
Length = 337
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+S ++R R+W YIK NNLQDP++K + CD+KL+ +
Sbjct: 272 TGESELARTDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELF 314
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ L +L L+EF+ ++R ++W YI+ NLQDPNN+ + CD++LRS
Sbjct: 131 KRGGGFCKLCSLSPQLQEFMEAPEMARTEVVKQLWVYIREKNLQDPNNRRNIICDERLRS 190
Query: 75 IL 76
+
Sbjct: 191 LF 192
>gi|168032290|ref|XP_001768652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680151|gb|EDQ66590.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 308
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 37 SRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFP 96
++SR R+W YIK NNLQDP+NK ++ CD++L+ + V +L L+ HF
Sbjct: 245 GKVSRADAVKRLWIYIKENNLQDPSNKKMIVCDEQLQDLFDCDHFVGF-DLTKLLTRHFI 303
Query: 97 K 97
K
Sbjct: 304 K 304
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ +G++ + R ++W+YI+ +NLQDP++K + C+ LR+ L+G + ++ ++
Sbjct: 116 LQAIIGEAELPRTQVVKQLWAYIREHNLQDPDDKRKIICNDALRN-LLGTNSTDMFKMNK 174
Query: 90 LIKLH-FPKD 98
L+ H FP D
Sbjct: 175 LLSKHIFPLD 184
>gi|219110293|ref|XP_002176898.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411433|gb|EEC51361.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 294
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L E G++ + R ++W YIK N LQ+P++K + CD+KLR++ M K +V +
Sbjct: 204 LSAELAEITGEAILPRPQVVSKIWEYIKANELQNPSDKREILCDEKLRAV-MKKPKVTMF 262
Query: 86 ELPALIKLHF 95
+ I H
Sbjct: 263 NMNKYISPHI 272
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 26 LPSTLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+ L F+G+ + ++R +W YI+ +NLQ+P NK + D +R + G R +
Sbjct: 92 ISDALANFLGKGKEMARTDIVKSLWEYIREHNLQNPENKKEIILDDAMRDVF-GCDRFTM 150
Query: 85 AELPALIKLH 94
+ I H
Sbjct: 151 FTMNKYIGAH 160
>gi|449461413|ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 332
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
K+ L +L L+EF+G ++R ++W++I+ NNLQDP+N+ + CD+ L++
Sbjct: 113 KRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKA 172
Query: 75 ILMGKSRVELAELPALIKLH 94
L G + + + ++ + H
Sbjct: 173 -LFGVNSINMFQMNKALSKH 191
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ + R R+W YIK NNLQDP++K + CD++L+ +
Sbjct: 267 TGEDALPRSDVVKRMWDYIKQNNLQDPSDKRRIICDERLKELF 309
>gi|365758907|gb|EHN00728.1| Tri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 227
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L++LP LREF+G + R +W YIK +NLQ+PN++ + CD+K+ I K
Sbjct: 125 LLSLP--LREFLGTEELPRTQVVKMIWQYIKEHNLQNPNDRREIICDKKMEPIFGKK 179
>gi|414584929|tpg|DAA35500.1| TPA: hypothetical protein ZEAMMB73_283156 [Zea mays]
Length = 387
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W+YI+ NNLQDP++K + C+ +LR ++ ++ ++
Sbjct: 217 LQTIVGETAMSRTQIVKQLWAYIRQNNLQDPDDKRKIICNDELR-VVFETDTTDMFKMNK 275
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 276 LLAKHITPLDPK 287
>gi|409076202|gb|EKM76575.1| hypothetical protein AGABI1DRAFT_115684 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426193445|gb|EKV43378.1| hypothetical protein AGABI2DRAFT_195037 [Agaricus bisporus var.
bisporus H97]
Length = 415
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L + +G SRLG +W+YIK NLQD ++ +++ D+KLR I G +
Sbjct: 199 LSTELSQVLGIKEDSRLGVVQTLWNYIKLQNLQDKADRRMIHADEKLRMIF-GAETIAFQ 257
Query: 86 ELPALIKLHF 95
++P L+ H
Sbjct: 258 QIPELVNRHL 267
>gi|46445959|ref|YP_007324.1| hypothetical protein pc0325 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46399600|emb|CAF23049.1| conserved hypothetical protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 98
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
KK + + V + L E VG + R RVW YIK N LQD NK +N D KL
Sbjct: 8 KKNSAFMRPVQVSEVLAEIVGNGPMPRTEVTKRVWDYIKKNKLQDQTNKRNINPDAKLGK 67
Query: 75 ILMGKSRVELAELPALIKLHFPKDPK 100
+L +++ ++ + I H K+P+
Sbjct: 68 VLGSDQSIDMFKMTSKIAKHL-KEPE 92
>gi|242074688|ref|XP_002447280.1| hypothetical protein SORBIDRAFT_06g031960 [Sorghum bicolor]
gi|241938463|gb|EES11608.1| hypothetical protein SORBIDRAFT_06g031960 [Sorghum bicolor]
Length = 395
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W+YI+ NNLQDP++K + C+ +LR ++ ++ ++
Sbjct: 227 LQTIVGETAMSRTQIVKQLWAYIRQNNLQDPDDKRKIICNDELR-VVFETDTTDMFKMNK 285
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 286 LLAKHITPLDPK 297
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+W YIK N L+D N++++ CD KL+ L G + ++ L ++ HF K
Sbjct: 346 LWDYIKANQLEDVINESIL-CDSKLQE-LFGCESIPMSGLSEMLGHHFIK 393
>gi|168029051|ref|XP_001767040.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681782|gb|EDQ68206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 380
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
V ++SR R+W+YIK +NLQDP NK + CDQ L+ +L V +L L+K
Sbjct: 314 VEDGKVSRAEAAKRMWAYIKDHNLQDPTNKKKILCDQPLQDLLDCDHFVGF-DLSKLLKR 372
Query: 94 HFPK 97
HF K
Sbjct: 373 HFIK 376
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L+ +G+S + R ++W+YI+ +NLQDP +K + CD LR+ L+G + ++
Sbjct: 184 LSPELQTIIGESELPRTQVVKQLWAYIREHNLQDPEDKRKIICDDALRN-LLGTNSTDMF 242
Query: 86 ELPALIKLH-FPKD 98
++ L+ H +P D
Sbjct: 243 KMNKLLSRHIWPLD 256
>gi|389614824|dbj|BAM20428.1| brg-1 associated factor, partial [Papilio polytes]
Length = 289
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIK--LHFPKDP 99
+W Y+KT+ LQDP+ + + CD+ L I G +RV+LAE+PA + LH P DP
Sbjct: 129 LWQYVKTHRLQDPHEREYIACDKYLEQIF-GCARVKLAEVPARLGALLHAP-DP 180
>gi|120613258|ref|YP_972936.1| DNA topoisomerase III [Acidovorax citrulli AAC00-1]
gi|120591722|gb|ABM35162.1| DNA topoisomerase III [Acidovorax citrulli AAC00-1]
Length = 982
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G I R ++W YIK +NLQDP +K + D KLR + GK + EL
Sbjct: 911 AALAAVIGPEPIGRPEAVKKMWEYIKAHNLQDPKDKRTIKADAKLREVF-GKESAGMFEL 969
Query: 88 PALIKLHFPKD 98
++ H D
Sbjct: 970 AGILGKHLQGD 980
>gi|357613442|gb|EHJ68506.1| hypothetical protein KGM_09093 [Danaus plexippus]
Length = 235
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G++ + R RVW+ IK NL DPNNK CD L ++ G R
Sbjct: 164 LSPALSELMGETEMPRHEVVKRVWTIIKEKNLYDPNNKQFAICDDALYKVI-GTKRFRTF 222
Query: 86 ELPALIKLHFPKD 98
+ +K HF D
Sbjct: 223 GMMKYLKTHFLDD 235
>gi|58264838|ref|XP_569575.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225807|gb|AAW42268.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 252
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L +L E VG +SR +W+Y+K NLQD N++ + CD KLR +
Sbjct: 177 LSDSLAELVGSHSLSRPQVVKHIWAYVKERNLQDSNDRRYILCDDKLREVF 227
>gi|116200844|ref|XP_001226234.1| hypothetical protein CHGG_10967 [Chaetomium globosum CBS 148.51]
gi|88175681|gb|EAQ83149.1| hypothetical protein CHGG_10967 [Chaetomium globosum CBS 148.51]
Length = 294
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL L + G+S++SR ++W YIK N+LQDP++K + CD KL ++
Sbjct: 220 NLSQPLADVCGESQLSRPQVVKKLWDYIKGNSLQDPSDKRQILCDDKLHAVF 271
>gi|383760487|ref|YP_005439473.1| SWIB/MDM2 domain-containing protein [Rubrivivax gelatinosus IL144]
gi|381381157|dbj|BAL97974.1| SWIB/MDM2 domain protein [Rubrivivax gelatinosus IL144]
Length = 147
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R +VW YIK N LQD K ++N D KL++I K++V + E+
Sbjct: 80 AALAAVIGDKPLPRTEITKKVWEYIKKNGLQDKAKKTMINADAKLKAIF-DKAQVSMFEM 138
Query: 88 PALIKLHF 95
LI H
Sbjct: 139 TKLISSHL 146
>gi|347820616|ref|ZP_08874050.1| DNA topoisomerase III [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 961
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 26 LP-STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
LP + L +G + ++R ++W YI+ N LQDP NK + D KLR++ GK + +
Sbjct: 891 LPNAALAAVIGSAPVTRPEAIKKLWEYIRENKLQDPRNKRSIVADAKLRAVF-GKDQAGM 949
Query: 85 AELPALIKLHF 95
EL ++ H
Sbjct: 950 FELAGILGQHL 960
>gi|337281415|ref|YP_004620887.1| type IA DNA topoisomerase [Ramlibacter tataouinensis TTB310]
gi|334732492|gb|AEG94868.1| Candidate type IA DNA topoisomerase [Ramlibacter tataouinensis
TTB310]
Length = 989
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG ++R ++W YIK N LQD NK +N D KL ++ GK +V + EL
Sbjct: 924 LAAVVGAEPVARTEVIKKLWDYIKANGLQDAANKRAINADAKLAAVF-GKPQVTMFELAG 982
Query: 90 LIKLHF 95
++ H
Sbjct: 983 IVGKHL 988
>gi|134109669|ref|XP_776513.1| hypothetical protein CNBC4390 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259191|gb|EAL21866.1| hypothetical protein CNBC4390 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 254
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L +L E VG +SR +W+Y+K NLQD N++ + CD KLR +
Sbjct: 179 LSDSLAELVGSHSLSRPQVVKHIWAYVKERNLQDSNDRRYILCDDKLREVF 229
>gi|443897196|dbj|GAC74537.1| hypothetical protein PANT_12d00019 [Pseudozyma antarctica T-34]
Length = 262
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + G + R ++W+YIK+NNLQ+ +NK + CD KL I GK V+ E+
Sbjct: 192 LADVCGGDEMPRHAVVKQLWAYIKSNNLQNESNKRQILCDAKLTDIF-GKEAVDSFEMAK 250
Query: 90 LIKLHFPK 97
LI H K
Sbjct: 251 LIGSHLTK 258
>gi|149185583|ref|ZP_01863899.1| hypothetical protein ED21_21199 [Erythrobacter sp. SD-21]
gi|148830803|gb|EDL49238.1| hypothetical protein ED21_21199 [Erythrobacter sp. SD-21]
Length = 83
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VNL L VG+ ++R +VW +IK N+LQD ++ ++N D KL +++ GK ++
Sbjct: 12 VNLSPELENVVGKGPMTRAQVTSKVWDHIKANDLQDSKDRRMINPDDKLGAVI-GKEQIS 70
Query: 84 LAELPALIKLHF 95
+ ++ + H
Sbjct: 71 MFKMTGAVSKHM 82
>gi|147860060|emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
Length = 332
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+ +S +SR ++W YIK NNLQDP++K + CD+KL+ + S +P L+
Sbjct: 267 IEESALSRAEVVKKIWEYIKQNNLQDPSDKRRIICDEKLKELFDVDSFNGFT-VPKLLSA 325
Query: 94 HFPK 97
HF K
Sbjct: 326 HFIK 329
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 4 QGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNK 63
+G KK+ + K+ L +L L++F+G ++R ++W +I+ +LQDPNN+
Sbjct: 117 RGSKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQDPNNR 176
Query: 64 NVVNCDQKLRSILMGKSRVELAELPALIKLH 94
+ CD+ LR+ L G + + ++ + H
Sbjct: 177 RNIICDETLRA-LFGVDSINMFQMNKALSKH 206
>gi|332526907|ref|ZP_08403000.1| SWIB/MDM2 domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332111349|gb|EGJ11333.1| SWIB/MDM2 domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 146
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R +VW YIK N LQD K ++N D KL++I K++V + E+
Sbjct: 79 AALAAVIGDKPLPRTEITKKVWEYIKKNGLQDKAKKTMINADAKLKAIF-EKAQVSMFEM 137
Query: 88 PALIKLHF 95
LI H
Sbjct: 138 TKLISSHL 145
>gi|255562647|ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
gi|223538407|gb|EEF40013.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G++ +SR R+W YIK NNLQDP++K + CD+KL+ +
Sbjct: 259 TGENALSRADVIKRMWEYIKQNNLQDPSDKRRIICDEKLKELF 301
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
+ K+ L +L L+E G +++R ++WS+I+ LQDPNN+ + CD+
Sbjct: 116 EGKKRGGGFSKLCSLSPQLQELTGVPQLARTEVVKQLWSHIREKKLQDPNNRRNIICDEP 175
Query: 72 LRSILMGKSRVELAELPALIKLH 94
R+ L G +++ ++ ++ H
Sbjct: 176 FRA-LFGVDSIDMFQMNKVLSKH 197
>gi|393724614|ref|ZP_10344541.1| hypothetical protein SPAM2_13223 [Sphingomonas sp. PAMC 26605]
Length = 93
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 9 TVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
T + K + + + L VG ++ R +VW+YIK ++LQ+P NK +
Sbjct: 6 TAKSDAPKTGGIFAPITPSADLAAIVGADKLPRSEVISKVWAYIKQHDLQNPENKREIVA 65
Query: 69 DQKLRSILMGKSRVELAEL 87
D+KL+ I GK +V + E+
Sbjct: 66 DEKLKKIF-GKDKVTMFEM 83
>gi|237833393|ref|XP_002365994.1| SWIB/MDM2 domain-containing protein [Toxoplasma gondii ME49]
gi|211963658|gb|EEA98853.1| SWIB/MDM2 domain-containing protein [Toxoplasma gondii ME49]
gi|221508962|gb|EEE34531.1| SWIB/MDM2 domain-containing protein, putative [Toxoplasma gondii
VEG]
Length = 254
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+L L F+G++ SR+ +W YIK +NLQ P NK ++N D LR + K +V
Sbjct: 175 CDLKGPLATFMGKTEASRVEVVKHIWDYIKRHNLQSPENKRMINADSTLRPLFQ-KDQVS 233
Query: 84 LAEL 87
+ EL
Sbjct: 234 MFEL 237
>gi|239049993|ref|NP_001131941.2| uncharacterized protein LOC100193333 [Zea mays]
gi|238908634|gb|ACF80572.2| unknown [Zea mays]
gi|238908806|gb|ACF86689.2| unknown [Zea mays]
gi|413919846|gb|AFW59778.1| SWIB/MDM2 domain containing protein isoform 1 [Zea mays]
gi|413919847|gb|AFW59779.1| SWIB/MDM2 domain containing protein isoform 2 [Zea mays]
Length = 387
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W+YI+ NNLQDP++K + C+ +LR ++ ++ ++
Sbjct: 216 LQTIVGETAMSRTQIVKQLWAYIRQNNLQDPDDKRKIICNDELR-VVFETDNTDMFKMNK 274
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 275 LLAKHITPLDPK 286
>gi|388852014|emb|CCF54370.1| uncharacterized protein [Ustilago hordei]
Length = 262
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
+ + G + + R ++W+YIK+NNLQ+ +NK + CD KL I GK V+ E+
Sbjct: 192 MAQVCGGNEMPRHAVVKQLWAYIKSNNLQNESNKRQILCDAKLTDIF-GKESVDSFEMAK 250
Query: 90 LIKLHFPK 97
LI H K
Sbjct: 251 LIGSHLTK 258
>gi|221488456|gb|EEE26670.1| SWIB/MDM2 domain-containing protein, putative [Toxoplasma gondii
GT1]
Length = 254
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+L L F+G++ SR+ +W YIK +NLQ P NK ++N D LR + K +V
Sbjct: 175 CDLKGPLATFMGKTEASRVEVVKHIWDYIKRHNLQSPENKRMINADSTLRPLFQ-KDQVS 233
Query: 84 LAEL 87
+ EL
Sbjct: 234 MFEL 237
>gi|302144157|emb|CBI23284.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 4 QGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNK 63
+G KK+ + K+ L +L L++F+G ++R ++W +I+ +LQDPNN+
Sbjct: 117 RGSKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQDPNNR 176
Query: 64 NVVNCDQKLRSIL 76
+ CD+ LR++
Sbjct: 177 RNIICDETLRALF 189
>gi|255730345|ref|XP_002550097.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132054|gb|EER31612.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 230
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G + SR +WSYIK NNLQ+PN+K + CD+KL + KS V
Sbjct: 117 LSPDLTSVIGVEKTSRPKVVKLLWSYIKDNNLQNPNDKRQIECDEKLYRVFKKKS-VGAF 175
Query: 86 ELPALIKLHF--PKD 98
E+ L+ H P+D
Sbjct: 176 EMNKLLSNHIFKPED 190
>gi|365986593|ref|XP_003670128.1| hypothetical protein NDAI_0E00690 [Naumovozyma dairenensis CBS 421]
gi|343768898|emb|CCD24885.1| hypothetical protein NDAI_0E00690 [Naumovozyma dairenensis CBS 421]
Length = 464
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L+ F+G+S +SR R+W+YIK N LQ P+++ D KL+S+ G R+
Sbjct: 184 LKSFLGESELSRQDTVKRIWTYIKQNKLQSPSDRREDLWDNKLKSLFQGYQRI 236
>gi|330444002|ref|YP_004376988.1| DNA topoisomerase [Chlamydophila pecorum E58]
gi|328807112|gb|AEB41285.1| DNA topoisomerase [Chlamydophila pecorum E58]
Length = 862
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 26 LPS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+PS L +G + +SR +VW YIK +NLQ P NK ++ D+K +I+ G + +++
Sbjct: 788 VPSPALASMIGDAPLSRGEATKKVWEYIKAHNLQSPENKKLLLPDEKFSAII-GNAPIDM 846
Query: 85 AELPALIKLHFPK 97
LP L+ H K
Sbjct: 847 FALPKLLSAHLKK 859
>gi|359480441|ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
vinifera]
Length = 296
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 4 QGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNK 63
+G KK+ + K+ L +L L++F+G ++R ++W +I+ +LQDPNN+
Sbjct: 117 RGSKKSNKEVKKRGGGFCKLCSLSPELQKFIGVPELARTEVVKQLWVHIREKDLQDPNNR 176
Query: 64 NVVNCDQKLRSIL 76
+ CD+ LR++
Sbjct: 177 RNIICDETLRALF 189
>gi|321253712|ref|XP_003192826.1| hypothetical protein CGB_C4270C [Cryptococcus gattii WM276]
gi|317459295|gb|ADV21039.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 252
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L + VG +SR +W+Y+K NLQD N+K + CD KLR I
Sbjct: 177 LSGALADLVGTHSLSRPQVVKHIWAYVKERNLQDSNDKRYILCDDKLREIF 227
>gi|344233090|gb|EGV64963.1| hypothetical protein CANTEDRAFT_121207 [Candida tenuis ATCC 10573]
gi|344233091|gb|EGV64964.1| SWIB-domain-containing protein [Candida tenuis ATCC 10573]
Length = 252
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D PK+ + V L + L E +G + R +W YIK N LQDPN+ + CD+K
Sbjct: 122 DKPKRKSVFQREVQLSAPLSEIIGVTSAPRGQVVKLLWQYIKGNKLQDPNSGRTILCDEK 181
Query: 72 LRSILMGKSRVELAELPALIKLHF 95
L ++ K A L+K F
Sbjct: 182 LENLFKKKKVDSFAMQKDLVKHMF 205
>gi|319764850|ref|YP_004128787.1| DNA topoisomerase iii [Alicycliphilus denitrificans BC]
gi|330827055|ref|YP_004390358.1| DNA topoisomerase III [Alicycliphilus denitrificans K601]
gi|317119411|gb|ADV01900.1| DNA topoisomerase III [Alicycliphilus denitrificans BC]
gi|329312427|gb|AEB86842.1| DNA topoisomerase III [Alicycliphilus denitrificans K601]
Length = 973
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G ++R ++W YIK +NLQDP +K + D KLR++ GK + + EL
Sbjct: 906 AQLAAVIGAEPVARPEAVKKMWDYIKAHNLQDPKDKRTIVADDKLRAVF-GKDSIGMFEL 964
Query: 88 PALIKLHF 95
++ H
Sbjct: 965 AGVLGRHL 972
>gi|242796033|ref|XP_002482714.1| SWIB/MDM2 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218719302|gb|EED18722.1| SWIB/MDM2 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 281
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 24 VNLPSTLREFV-GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
+NL L E + G+ +SR RVW YIK N+LQDP+++ + CD ++R ++ + RV
Sbjct: 205 LNLSPALSELLDGEVALSRPQTVKRVWEYIKANDLQDPSDRRQIRCDDRMR-LVFKQDRV 263
Query: 83 EL 84
+
Sbjct: 264 HM 265
>gi|146412011|ref|XP_001481977.1| hypothetical protein PGUG_05740 [Meyerozyma guilliermondii ATCC
6260]
Length = 185
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L S L+E +G+ + SR +W+YIK +LQ+P +K +NCD+KL + L KS++
Sbjct: 129 LSSQLQEVIGEEKCSRPRVVKLLWAYIKDRDLQNPQDKRQINCDEKL-TALFKKSKL 184
>gi|424824856|ref|ZP_18249843.1| hypothetical protein CAB1_0173 [Chlamydophila abortus LLG]
gi|333409955|gb|EGK68942.1| hypothetical protein CAB1_0173 [Chlamydophila abortus LLG]
Length = 87
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VN+ S L VG+ + R +VW YIK +NLQDP NK + D+ L + K+ ++
Sbjct: 14 VNITSDLAAIVGKGPMPRTEIVKKVWDYIKKHNLQDPKNKRNILPDEALAKVFGSKNPID 73
Query: 84 LAELPALIKLHFPK 97
+ ++ + H K
Sbjct: 74 MFQMTKALSSHIVK 87
>gi|395009905|ref|ZP_10393351.1| SWIB domain-containing protein possibly involved in chromatin
remodeling, partial [Acidovorax sp. CF316]
gi|394312030|gb|EJE49281.1| SWIB domain-containing protein possibly involved in chromatin
remodeling, partial [Acidovorax sp. CF316]
Length = 59
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 39 ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
++R ++W YIK NNLQDP +K + D KLR++ GK + EL ++ H
Sbjct: 3 VARPEAVKKLWEYIKANNLQDPKDKRTIVADDKLRAVF-GKDSAGMFELAGILGQHL 58
>gi|190349062|gb|EDK41642.2| hypothetical protein PGUG_05740 [Meyerozyma guilliermondii ATCC
6260]
Length = 185
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L S L+E +G+ + SR +W+YIK +LQ+P +K +NCD+KL + L KS++
Sbjct: 129 LSSQLQEVIGEEKCSRPRVVKLLWAYIKDRDLQNPQDKRQINCDEKL-TALFKKSKL 184
>gi|195626374|gb|ACG35017.1| SWIB/MDM2 domain containing protein [Zea mays]
Length = 387
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W+YI+ NNLQDP++K + C+ +LR ++ ++ ++
Sbjct: 216 LQTIVGETAMSRTQIVKQLWAYIRQNNLQDPDDKRKIICNDELR-VVFETDTTDMFKMNK 274
Query: 90 LIKLHF-PKDPK 100
L+ H P DPK
Sbjct: 275 LLAKHITPLDPK 286
>gi|407916883|gb|EKG10213.1| hypothetical protein MPH_12813 [Macrophomina phaseolina MS6]
Length = 510
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
+NP++ L L E +G R G M +W Y+K NNLQ+ + + CD +
Sbjct: 279 ENPERF-------KLSPPLAELLGTEEDDRGGILMGIWIYVKANNLQEDEDSRKIRCDAQ 331
Query: 72 LRSILMGKSRVELAELPALIKLHFPKDP 99
L+ + + V E+P LI H P
Sbjct: 332 LKLLFENRDFVPFPEIPRLILPHLSPLP 359
>gi|396498349|ref|XP_003845199.1| hypothetical protein LEMA_P005070.1 [Leptosphaeria maculans JN3]
gi|312221780|emb|CBY01720.1| hypothetical protein LEMA_P005070.1 [Leptosphaeria maculans JN3]
Length = 718
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 36/78 (46%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
++ L L E + R G M +W Y ++ NLQ +++ CD KL+++ G+
Sbjct: 305 EVFRLSKPLAELLDTDEEDRAGVLMGIWEYARSQNLQQDDDERKFACDTKLKALFGGQDS 364
Query: 82 VELAELPALIKLHFPKDP 99
LP LIK H P
Sbjct: 365 FYFPNLPTLIKPHLATLP 382
>gi|357140816|ref|XP_003571959.1| PREDICTED: uncharacterized protein LOC100833705 [Brachypodium
distachyon]
Length = 1599
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
Query: 30 LREFVG------QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
L EF+G QS+IS+ + + YIK NNL+DP K+ + CD +L S L K RV
Sbjct: 378 LLEFIGHMRNGDQSQISQFDVQVLLLEYIKQNNLRDPRKKSQIICDTRLSS-LFRKPRVG 436
Query: 84 LAELPALIKLHF 95
E+ L++LHF
Sbjct: 437 HFEMLKLLELHF 448
>gi|260219612|emb|CBA26457.1| hypothetical protein Csp_E35450 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 80
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
++W+YIK N LQD NK +N D KL+ I GK++V + EL LI H
Sbjct: 32 KLWAYIKKNGLQDAVNKRNINADAKLKEIF-GKAQVTMFELAGLIGKHL 79
>gi|85374762|ref|YP_458824.1| hypothetical protein ELI_09675 [Erythrobacter litoralis HTCC2594]
gi|84787845|gb|ABC64027.1| hypothetical protein ELI_09675 [Erythrobacter litoralis HTCC2594]
Length = 82
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L L VG+ ++R +VW YIK ++LQD +K +N D KL +++ GK ++
Sbjct: 11 VTLSPELENVVGKGPMTRAQVTSKVWEYIKKHDLQDSKDKRQINPDDKLGAVI-GKEQIS 69
Query: 84 LAELPALIKLHF 95
+ ++ A + H
Sbjct: 70 MFKMTAAVSKHL 81
>gi|396458098|ref|XP_003833662.1| similar to SWIB/MDM2 domain-containing protein [Leptosphaeria
maculans JN3]
gi|312210210|emb|CBX90297.1| similar to SWIB/MDM2 domain-containing protein [Leptosphaeria
maculans JN3]
Length = 285
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E +G++++SR ++W Y+K +LQDP +K + CD +R++
Sbjct: 210 LSPALSELLGETQLSRPQTVKKIWEYVKERDLQDPADKRQIRCDDAMRAVF 260
>gi|332531178|ref|ZP_08407091.1| DNA topoisomerase III [Hylemonella gracilis ATCC 19624]
gi|332039285|gb|EGI75698.1| DNA topoisomerase III [Hylemonella gracilis ATCC 19624]
Length = 968
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G ++R ++W YIK LQDP +K V D KL+ + GK RV + E+
Sbjct: 901 AELAAVIGSEPVARTEVIKKIWDYIKAQGLQDPKDKRSVLADAKLQPVF-GKDRVTMFEI 959
Query: 88 PALIKLHF 95
L+ H
Sbjct: 960 TGLVGKHL 967
>gi|156847606|ref|XP_001646687.1| hypothetical protein Kpol_1028p105 [Vanderwaltozyma polyspora DSM
70294]
gi|156117366|gb|EDO18829.1| hypothetical protein Kpol_1028p105 [Vanderwaltozyma polyspora DSM
70294]
Length = 261
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L L+EF+G++ + R +VW YIK ++LQ+P+++ + CD+K++ I K
Sbjct: 130 LSPKLQEFLGETELPRTQVVKKVWDYIKEHDLQNPDDRREILCDEKMQPIFGKK 183
>gi|320165673|gb|EFW42572.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 612
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V + L +G S + R ++W IK NLQDP NK + CD +L +I+ GK RV+
Sbjct: 490 VGVSPELAALLGASELPRSQVIKKLWVIIKERNLQDPTNKQFILCDPQLEAII-GKPRVQ 548
Query: 84 LAELPALIKLH 94
+ ++ I+ H
Sbjct: 549 MFKMTREIERH 559
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG +++R ++W +K NLQDP+++ + C+ ++++ G +RV
Sbjct: 304 MELSPALAALVGAPQMARPKVVSKIWEIVKAENLQDPDDRRYIRCNDAMKAVF-GSARVH 362
Query: 84 LAELPALIKLHFPKD 98
+ + ++ H K+
Sbjct: 363 MFSMNKVLSDHIFKN 377
>gi|320581209|gb|EFW95430.1| RNA polymerase I transcription factor subunit, putative [Ogataea
parapolymorpha DL-1]
Length = 205
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 26 LPS-TLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
LPS L +F+G S I+R ++W Y+K N LQ+PN++ + CD KLR + K
Sbjct: 125 LPSEALAQFLGSSEPIARTQVVKKIWEYVKANELQNPNDRREILCDDKLRPVFGDK 180
>gi|330936328|ref|XP_003305343.1| hypothetical protein PTT_18158 [Pyrenophora teres f. teres 0-1]
gi|311317686|gb|EFQ86572.1| hypothetical protein PTT_18158 [Pyrenophora teres f. teres 0-1]
Length = 283
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E +G++++SR ++W Y+K LQDP++K + CD +R++
Sbjct: 207 LSPALSELLGETQLSRPQTVKKIWEYVKARELQDPSDKRQIRCDDAMRAVF 257
>gi|357166606|ref|XP_003580766.1| PREDICTED: uncharacterized protein LOC100831700 [Brachypodium
distachyon]
Length = 391
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG++ +SR ++W+YI+ NNLQDP++K + C+ +LR ++ ++ ++
Sbjct: 220 LQTVVGETAMSRTQIVKQLWAYIRQNNLQDPDDKRKIICNDELR-VVFETDATDMFKMNK 278
Query: 90 LIKLHF-PKDP 99
L+ H P DP
Sbjct: 279 LLAKHITPLDP 289
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 18 ANLIDLVNLP-----STLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
A + LVN P L +F+G + + +W YIK N L+D + +++ CD K
Sbjct: 306 AQEMPLVNEPYLVVSDALAKFIGIEGSVPHHDALKYLWDYIKANQLEDATSTSII-CDSK 364
Query: 72 LRSILMGKSRVELAELPALIKLHF 95
L+ L G + + +E+ L+ H+
Sbjct: 365 LQE-LFGCASILASEVSELLAHHY 387
>gi|365758273|gb|EHN00124.1| Uaf30p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 219
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L +L +G+ R++R +VW+YIK ++LQ+P N+ + CD+KL ++ GK R +
Sbjct: 126 VILSKSLANLLGEPRLTRTDVVRQVWAYIKEHDLQNPKNRKEILCDEKL-ELIFGK-RTD 183
Query: 84 LAELPALIKLHFPKDP 99
+ ++ ++ H DP
Sbjct: 184 MFKMHKILVNHMT-DP 198
>gi|356527109|ref|XP_003532156.1| PREDICTED: uncharacterized protein LOC100801960 [Glycine max]
Length = 330
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 2 LPQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
+P+ +T + L + + L+ VGQ +SR ++W+YI+ NNLQDP+
Sbjct: 130 VPKESTQTKVKRRGGPGGLTKICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQDPS 189
Query: 62 NKNVVNCDQKLRSIL 76
NK + C+ +LR +
Sbjct: 190 NKRKIICNDELRVVF 204
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 17 LANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
LAN + T RE + QS + R R+W YIK N L+DP N + CD KL+ I
Sbjct: 259 LANFFGI-----TGREML-QSEVLR-----RIWEYIKVNQLEDPANPMAIVCDGKLQEIF 307
Query: 77 MGKSRVELAELPALIKLH 94
G + +P ++ H
Sbjct: 308 -GCESISALGIPEVLGRH 324
>gi|294658451|ref|XP_002770785.1| DEHA2F09856p [Debaryomyces hansenii CBS767]
gi|202953140|emb|CAR66310.1| DEHA2F09856p [Debaryomyces hansenii CBS767]
Length = 247
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 7 KKTVIDNPKKLAN--LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
KKT +P K N +L + L + +G + SR ++W+YIK NNLQ+P++K
Sbjct: 108 KKTKEKDPAKNRNSAFFQEQHLSNELADVLGVEKCSRPQVVKQLWTYIKDNNLQNPDDKR 167
Query: 65 VVNCDQKLRSILMGKS 80
+ CD KL+++ KS
Sbjct: 168 QIICDTKLQALFKKKS 183
>gi|189193639|ref|XP_001933158.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978722|gb|EDU45348.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 274
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E +G++++SR ++W Y+K LQDP++K + CD +R++
Sbjct: 198 LSPALSELLGETQLSRPQTVKKIWEYVKARELQDPSDKRQIRCDDAMRAVF 248
>gi|338734173|ref|YP_004672646.1| DNA topoisomerase 1 [Simkania negevensis Z]
gi|336483556|emb|CCB90155.1| DNA topoisomerase 1 [Simkania negevensis Z]
Length = 840
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L+ VG+ ++R ++W YIK++NLQDP+NK ++ D+KL + +++
Sbjct: 770 LSKELQAVVGEKELTRGEVTKKIWEYIKSHNLQDPSNKRLIVPDEKLEKVFGNSEPLDMF 829
Query: 86 ELPALIKLH 94
+L ++ H
Sbjct: 830 KLAGVLGKH 838
>gi|418528270|ref|ZP_13094220.1| DNA topoisomerase III [Comamonas testosteroni ATCC 11996]
gi|371454646|gb|EHN67648.1| DNA topoisomerase III [Comamonas testosteroni ATCC 11996]
Length = 978
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G SR ++W YIK N LQD +K +N D KL+ + GK ++ + EL
Sbjct: 911 ADLAAVIGSEPTSRPDVIKKLWDYIKANGLQDAKDKRAINADAKLKPVF-GKEQISMFEL 969
Query: 88 PALIKLH 94
++ H
Sbjct: 970 AGIVGKH 976
>gi|299530913|ref|ZP_07044327.1| DNA topoisomerase III [Comamonas testosteroni S44]
gi|298721134|gb|EFI62077.1| DNA topoisomerase III [Comamonas testosteroni S44]
Length = 978
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G SR ++W YIK N LQD +K +N D KL+ + GK ++ + EL
Sbjct: 911 ADLAAVIGSEPTSRPDVIKKLWDYIKANGLQDAKDKRAINADAKLKPVF-GKEQISMFEL 969
Query: 88 PALIKLH 94
++ H
Sbjct: 970 AGIVGKH 976
>gi|264680921|ref|YP_003280831.1| DNA topoisomerase III [Comamonas testosteroni CNB-2]
gi|262211437|gb|ACY35535.1| DNA topoisomerase III [Comamonas testosteroni CNB-2]
Length = 974
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G SR ++W YIK N LQD +K +N D KL+ + GK ++ + EL
Sbjct: 907 ADLAAVIGSEPTSRPDVIKKLWDYIKANGLQDAKDKRAINADAKLKPVF-GKEQISMFEL 965
Query: 88 PALIKLH 94
++ H
Sbjct: 966 AGIVGKH 972
>gi|297803886|ref|XP_002869827.1| hypothetical protein ARALYDRAFT_492627 [Arabidopsis lyrata subsp.
lyrata]
gi|297315663|gb|EFH46086.1| hypothetical protein ARALYDRAFT_492627 [Arabidopsis lyrata subsp.
lyrata]
Length = 370
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 18 ANLIDLVNLPSTLREF--VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSI 75
A + V L L +F G++ ++ RVW YIK NNL+DP N + CD+KLR +
Sbjct: 288 AAVSSTVALSEPLAKFFGTGEAEMTDKEIIRRVWEYIKLNNLEDPVNPMAIQCDEKLRDL 347
Query: 76 LMGKS 80
L +S
Sbjct: 348 LGCES 352
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++W+YI+ NNLQDP+NK + CD LR +
Sbjct: 204 QLWAYIRKNNLQDPSNKRKIICDDALRVVF 233
>gi|62184807|ref|YP_219592.1| hypothetical protein CAB162 [Chlamydophila abortus S26/3]
gi|329942483|ref|ZP_08291293.1| SWIB/MDM2 domain protein [Chlamydophila psittaci Cal10]
gi|332287120|ref|YP_004422021.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci 6BC]
gi|384450266|ref|YP_005662866.1| hypothetical protein G5O_0190 [Chlamydophila psittaci 6BC]
gi|384451271|ref|YP_005663869.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci
01DC11]
gi|384452247|ref|YP_005664844.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci
08DC60]
gi|384453221|ref|YP_005665817.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci
C19/98]
gi|384454199|ref|YP_005666794.1| SWIB/MDM2 domain-containing protein [Chlamydophila psittaci
02DC15]
gi|392376373|ref|YP_004064151.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|406591985|ref|YP_006739165.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci CP3]
gi|406593096|ref|YP_006740275.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci NJ1]
gi|406594712|ref|YP_006741317.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci MN]
gi|407453655|ref|YP_006732763.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci 84/55]
gi|407454987|ref|YP_006733878.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci GR9]
gi|407456356|ref|YP_006734929.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci VS225]
gi|407457720|ref|YP_006736025.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci
WS/RT/E30]
gi|407458967|ref|YP_006737070.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci M56]
gi|407460337|ref|YP_006738112.1| SWIB/MDM2 domain-containing protein [Chlamydia psittaci WC]
gi|410858150|ref|YP_006974090.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|449070814|ref|YP_007437894.1| hypothetical protein AO9_00885 [Chlamydophila psittaci Mat116]
gi|62147874|emb|CAH63620.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
gi|313847716|emb|CBY16706.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
gi|325507161|gb|ADZ18799.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 6BC]
gi|328815393|gb|EGF85381.1| SWIB/MDM2 domain protein [Chlamydophila psittaci Cal10]
gi|328914360|gb|AEB55193.1| BAF60b domain protein [Chlamydophila psittaci 6BC]
gi|334692002|gb|AEG85221.1| SWIB/MDM2 domain protein [Chlamydophila psittaci C19/98]
gi|334692981|gb|AEG86199.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 01DC11]
gi|334693956|gb|AEG87173.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 02DC15]
gi|334694936|gb|AEG88152.1| SWIB/MDM2 domain protein [Chlamydophila psittaci 08DC60]
gi|405780414|gb|AFS19164.1| SWIB/MDM2 domain protein [Chlamydia psittaci 84/55]
gi|405781530|gb|AFS20279.1| SWIB/MDM2 domain protein [Chlamydia psittaci GR9]
gi|405783144|gb|AFS21892.1| SWIB/MDM2 domain protein [Chlamydia psittaci MN]
gi|405783617|gb|AFS22364.1| SWIB/MDM2 domain protein [Chlamydia psittaci VS225]
gi|405785392|gb|AFS24138.1| SWIB/MDM2 domain protein [Chlamydia psittaci WS/RT/E30]
gi|405785615|gb|AFS24360.1| SWIB/MDM2 domain protein [Chlamydia psittaci M56]
gi|405787199|gb|AFS25943.1| SWIB/MDM2 domain protein [Chlamydia psittaci WC]
gi|405787857|gb|AFS26600.1| SWIB/MDM2 domain protein [Chlamydia psittaci CP3]
gi|405788968|gb|AFS27710.1| SWIB/MDM2 domain protein [Chlamydia psittaci NJ1]
gi|410811045|emb|CCO01688.1| conserved hypothetical protein [Chlamydia psittaci 01DC12]
gi|449039322|gb|AGE74746.1| hypothetical protein AO9_00885 [Chlamydophila psittaci Mat116]
Length = 87
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VN+ S L VG+ + R +VW YIK NLQDP NK + D+ L + K+ ++
Sbjct: 14 VNITSDLAAIVGKGPMPRTEIVKKVWDYIKKRNLQDPKNKRNILPDEALAKVFGSKNPID 73
Query: 84 LAELPALIKLHFPK 97
+ ++ + H K
Sbjct: 74 MFQMTKALSSHIVK 87
>gi|18415906|ref|NP_567661.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|16604705|gb|AAL24145.1| unknown protein [Arabidopsis thaliana]
gi|20258979|gb|AAM14205.1| unknown protein [Arabidopsis thaliana]
gi|332659200|gb|AEE84600.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 385
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 24 VNLPSTLREF--VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
V L L +F G++ ++ RVW YIK NNL+DP N + CD+KLR L+G
Sbjct: 309 VTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMAIQCDEKLRD-LLGCES 367
Query: 82 VELAELPALIKLHFPK 97
+ + +++ H K
Sbjct: 368 ISAVGINEMLRRHMYK 383
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L VG+ + R ++W+YI+ NNLQDP+NK + CD LR +
Sbjct: 207 LEVVVGEPALPRTEIVRQLWAYIRKNNLQDPSNKRKIICDDALRVVF 253
>gi|344304505|gb|EGW34737.1| hypothetical protein SPAPADRAFT_47821 [Spathaspora passalidarum
NRRL Y-27907]
Length = 248
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L +GQSR SR ++W YIK N+LQ+P +K + CD++L L K V
Sbjct: 142 LSNELANLIGQSRASRPQVVKQLWVYIKDNDLQNPEDKRQILCDERLER-LFKKKMVTSF 200
Query: 86 ELPALIKLHFPK 97
E+ L+ H K
Sbjct: 201 EMNKLLTSHIFK 212
>gi|221069760|ref|ZP_03545865.1| DNA topoisomerase III [Comamonas testosteroni KF-1]
gi|220714783|gb|EED70151.1| DNA topoisomerase III [Comamonas testosteroni KF-1]
Length = 978
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G SR ++W YIK N LQD +K +N D KL+ + GK ++ + EL
Sbjct: 911 ADLAAVIGSEPTSRPDVIKKLWDYIKANGLQDAKDKRAINADAKLKPVF-GKEQISMFEL 969
Query: 88 PALIKLH 94
++ H
Sbjct: 970 AGIVGKH 976
>gi|21537175|gb|AAM61516.1| unknown [Arabidopsis thaliana]
Length = 385
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 24 VNLPSTLREF--VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
V L L +F G++ ++ RVW YIK NNL+DP N + CD+KLR L+G
Sbjct: 309 VTLSEPLGKFFGTGETEMADEEIIRRVWEYIKLNNLEDPVNPMAIQCDEKLRD-LLGCES 367
Query: 82 VELAELPALIKLHFPK 97
+ + +++ H K
Sbjct: 368 ISAVGINEMLRRHMYK 383
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L VG+ + R ++W+YI+ NNLQDP+NK + CD LR +
Sbjct: 207 LEVVVGEPALPRTEIVRQLWAYIRKNNLQDPSNKRKIICDDALRVVF 253
>gi|89897832|ref|YP_514942.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila felis
Fe/C-56]
gi|89331204|dbj|BAE80797.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila felis
Fe/C-56]
Length = 862
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 26 LPS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+PS L + +G ++R ++W YIK +NLQ P NK ++ D K R ++ G V++
Sbjct: 789 IPSPQLAQMIGNEPVARGEATKKIWKYIKDHNLQSPENKKMLIPDDKFRGVI-GPEPVDM 847
Query: 85 AELPALIKLHFPK 97
+LP L+ H K
Sbjct: 848 FQLPKLLNQHLFK 860
>gi|302848251|ref|XP_002955658.1| hypothetical protein VOLCADRAFT_106876 [Volvox carteri f.
nagariensis]
gi|300259067|gb|EFJ43298.1| hypothetical protein VOLCADRAFT_106876 [Volvox carteri f.
nagariensis]
Length = 289
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 13 NPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
P + ++L L++ P L++F+G+ + R R+W YIK NNLQDP ++ + D KL
Sbjct: 78 TPARGSSLGCLLSEP--LQKFLGEESLPRTQVVKRLWDYIKANNLQDPKDRRRILLDDKL 135
Query: 73 RSILMG 78
R++
Sbjct: 136 RTLFTA 141
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L + G + R W+Y+K + LQDP+NK + CD L+ + G+SR++
Sbjct: 216 LRLSKDLASWCGADTMGRSDLTKFFWAYVKEHKLQDPSNKQYILCDAHLKKV-TGESRIQ 274
Query: 84 LAELPALIKLHFPKD 98
+ + H KD
Sbjct: 275 AFAIQKYLAGHIIKD 289
>gi|115477150|ref|NP_001062171.1| Os08g0502800 [Oryza sativa Japonica Group]
gi|42407772|dbj|BAD08918.1| parathymosin-like [Oryza sativa Japonica Group]
gi|42408131|dbj|BAD09270.1| parathymosin-like [Oryza sativa Japonica Group]
gi|113624140|dbj|BAF24085.1| Os08g0502800 [Oryza sativa Japonica Group]
Length = 406
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
L+ VG+ ++R ++W+YI+ NNLQDPNNK + C+ +LR + S
Sbjct: 227 LQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDS 277
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
G+ + RVW +IK+NNL+DP N ++ CD KL+ L G + + L+
Sbjct: 339 TGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQ-LFGCESLTAVSVSELLSQ 397
Query: 94 HFPKDP 99
H K P
Sbjct: 398 HLFKQP 403
>gi|388570208|ref|ZP_10156568.1| hypothetical protein Q5W_4925 [Hydrogenophaga sp. PBC]
gi|388262590|gb|EIK88220.1| hypothetical protein Q5W_4925 [Hydrogenophaga sp. PBC]
Length = 160
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + + R +VW YIK N LQD NK ++N D KL+ I K++ + E+
Sbjct: 93 AALAAIVGSNPLPRTEVTKKVWDYIKKNKLQDSVNKRMINADAKLKEIF-KKAQASMFEM 151
Query: 88 PALIKLHF 95
L+ H
Sbjct: 152 TKLVNDHL 159
>gi|336374576|gb|EGO02913.1| hypothetical protein SERLA73DRAFT_176377 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387457|gb|EGO28602.1| hypothetical protein SERLADRAFT_459225 [Serpula lacrymans var.
lacrymans S7.9]
Length = 365
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 12 DNPKKLANLIDLVNLPST------LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K+ ++ L + P L +G SRLG +W+YIK N LQD ++
Sbjct: 129 DIPTKIRLIVHLEHFPEQYKVSPELGNVLGIKEESRLGVIQTLWNYIKINGLQDKVDRRR 188
Query: 66 VNCDQKLRSILMGKSRVELAELPALIKLHF-PKDP 99
+ D LR I G+S V +LP L+ + P DP
Sbjct: 189 IRADDHLRPIFGGES-VVFQQLPELVNRYLMPPDP 222
>gi|406933255|gb|EKD67963.1| hypothetical protein ACD_48C00134G0001 [uncultured bacterium]
Length = 90
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 20 LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L+ + L L +G ++R ++W YIK NLQ+P+NK + D+ L + GK
Sbjct: 9 LMKPLTLSPELAAVIGAGPLARGQVMKKLWEYIKGKNLQNPSNKRNIIADELLLPLFGGK 68
Query: 80 SRVELAELPALIKLHFPKDP 99
V + E+ L+ H DP
Sbjct: 69 KEVTMFEMTKLVSAHL-TDP 87
>gi|218201407|gb|EEC83834.1| hypothetical protein OsI_29784 [Oryza sativa Indica Group]
Length = 394
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
L+ VG+ ++R ++W+YI+ NNLQDPNNK + C+ +LR + S
Sbjct: 226 LQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDS 276
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPAL 90
G+ + RVW +IK+NNL+DP N ++ CD KL+ + +S + L L
Sbjct: 338 TGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLFGCESLTAMNRLTGL 394
>gi|359495550|ref|XP_003635018.1| PREDICTED: uncharacterized protein LOC100853436 [Vitis vinifera]
gi|297741808|emb|CBI33113.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 4 QGVKKTVIDNPKK---LANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP 60
Q K++ PK+ L + + + L+ VG+ + R ++W+YI+ NNLQDP
Sbjct: 141 QAPKESAPAAPKRRGGSGGLNKVCGVSTELQAVVGEPTMPRTQIVKQLWAYIRKNNLQDP 200
Query: 61 NNKNVVNCDQKLRSILMGKS 80
+NK + CD LR + S
Sbjct: 201 SNKRKIICDDALRLVFETDS 220
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
G+ + + RVW YIK N L+DP N + CD KLR + +S L L +
Sbjct: 279 TGEREMLQEEALRRVWEYIKVNQLEDPLNSMAILCDAKLRELFGCESISALGVSEMLARH 338
Query: 94 HF 95
H
Sbjct: 339 HL 340
>gi|413925259|gb|AFW65191.1| hypothetical protein ZEAMMB73_350137 [Zea mays]
Length = 802
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG+ ++R ++W+YI+ NNLQDPNNK + C+ +LR + S ++ ++
Sbjct: 611 LQAIVGEPAMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDS-TDMFQMNK 669
Query: 90 LIKLH 94
L+ H
Sbjct: 670 LLSKH 674
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
RVW +IK+N+L+DP N V+ CD KL+ +
Sbjct: 736 RVWDHIKSNDLEDPENPTVILCDSKLKQLF 765
>gi|395493643|ref|ZP_10425222.1| hypothetical protein SPAM26_17494 [Sphingomonas sp. PAMC 26617]
gi|404253972|ref|ZP_10957940.1| hypothetical protein SPAM266_11940 [Sphingomonas sp. PAMC 26621]
Length = 93
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
L VG R+ R +VW YIK ++LQ+P NK + D+ L+ + GK RV + E+
Sbjct: 27 LGAIVGNDRLPRSEVISKVWEYIKKHDLQNPENKREIVADEALKKVF-GKDRVTMFEM 83
>gi|384250769|gb|EIE24248.1| SWIB-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 322
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L + L+ F+GQ + R ++W YIK +NLQ+PN+K + D KL++I
Sbjct: 117 LSADLQAFLGQESMPRTEVVKKMWEYIKEHNLQNPNDKRKIILDDKLKTIF 167
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+++F+G R++R ++W YI+ NNLQDPN+K + D+KL ++
Sbjct: 255 MQKFLGVERMARPQVVKQLWEYIRANNLQDPNDKRTILVDKKLGTLF 301
>gi|170749922|ref|YP_001756182.1| SWIB/MDM2 domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170656444|gb|ACB25499.1| SWIB/MDM2 domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 119
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG S + R +VW YIK NNLQ+P NK + D KL+ + GK + + E+
Sbjct: 51 AELGAIVGTSPLPRGEVVSKVWDYIKKNNLQNPQNKREIVADDKLKKVF-GKDKCSMFEM 109
Query: 88 PALIKLHF 95
+ H
Sbjct: 110 NKHLAAHL 117
>gi|425771362|gb|EKV09807.1| hypothetical protein PDIP_63010 [Penicillium digitatum Pd1]
gi|425776979|gb|EKV15176.1| hypothetical protein PDIG_28570 [Penicillium digitatum PHI26]
Length = 306
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 12 DNPKKLAN----LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVN 67
D PKK N +NL L +G+ +SR +VW YI+ N LQDP+++ +
Sbjct: 215 DEPKKEVNRNTGFHKPMNLSEPLSALLGEPTLSRPQTVKKVWQYIRENELQDPSDRRQIR 274
Query: 68 CDQKLRSIL 76
CD +R++
Sbjct: 275 CDDAMRAVF 283
>gi|169854889|ref|XP_001834116.1| SWI/SNF complex 60 kDa subunit [Coprinopsis cinerea okayama7#130]
gi|116504816|gb|EAU87711.1| SWI/SNF complex 60 kDa subunit [Coprinopsis cinerea okayama7#130]
Length = 407
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 12 DNPKKLANLIDLVNLPS------TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K+ ++ L + P L + +G SRLG +W+YIK+N LQD ++ +
Sbjct: 173 DVPTKIRVILHLEHYPEHFKLAPELADVLGIKEDSRLGIVQTLWNYIKSNGLQDKVDRRM 232
Query: 66 VNCDQKLRSILMGKSRVELAELPALI 91
+ D+KLR I G + A LP ++
Sbjct: 233 IRADEKLRPIF-GGDVIPFARLPEVV 257
>gi|407941365|ref|YP_006857006.1| DNA topoisomerase III [Acidovorax sp. KKS102]
gi|407899159|gb|AFU48368.1| DNA topoisomerase III [Acidovorax sp. KKS102]
Length = 969
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G ++R ++W YIK +NLQDP +K + D KLR++ GK + EL
Sbjct: 902 LAAVIGNEPVARPEAVKKMWEYIKAHNLQDPKDKRTIVADDKLRAVF-GKDSAGMFELAG 960
Query: 90 LIKLHF 95
++ H
Sbjct: 961 ILGNHL 966
>gi|384484392|gb|EIE76572.1| hypothetical protein RO3G_01276 [Rhizopus delemar RA 99-880]
Length = 476
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L E G ++ +W YIK ++ QDP++K +++CD+K+ S L G +++ +
Sbjct: 293 LATGLSELTGLRLATKPQIVTELWGYIKEHHCQDPHDKRIIHCDKKMLS-LFGVEKLQFS 351
Query: 86 ELPALI 91
++P +I
Sbjct: 352 QIPDVI 357
>gi|242082305|ref|XP_002445921.1| hypothetical protein SORBIDRAFT_07g028070 [Sorghum bicolor]
gi|241942271|gb|EES15416.1| hypothetical protein SORBIDRAFT_07g028070 [Sorghum bicolor]
Length = 427
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+ VG+ ++R ++W+YI+ NNLQDPNNK + C+ +LR + S ++ ++
Sbjct: 247 LQAIVGEPAMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDS-TDMFQMNK 305
Query: 90 LIKLH 94
L+ H
Sbjct: 306 LLSKH 310
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
RVW +IK+NNL+DP N V+ CD KL+ +
Sbjct: 372 RVWEHIKSNNLEDPENPTVILCDSKLKQLF 401
>gi|353236721|emb|CCA68710.1| probable UAF30-subunit of RNA polymerase I transcription factor
[Piriformospora indica DSM 11827]
Length = 295
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L + L E + ++ +SR ++W YIK + LQ P NK V+ CD+KL+ +
Sbjct: 222 LSTELAEVLDETTLSRPQVVKKLWDYIKYHQLQKPENKRVIRCDEKLQKVF 272
>gi|351731621|ref|ZP_08949312.1| DNA topoisomerase III [Acidovorax radicis N35]
Length = 975
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G ++R ++W YIK +NLQDP +K + D KLR++ GK + EL
Sbjct: 907 LAAVIGTEPVARPEAVKKMWEYIKAHNLQDPKDKRTIVADDKLRAVF-GKDSAGMFELAG 965
Query: 90 LIKLHF 95
++ H
Sbjct: 966 ILGNHL 971
>gi|222640825|gb|EEE68957.1| hypothetical protein OsJ_27851 [Oryza sativa Japonica Group]
Length = 333
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
L+ VG+ ++R ++W+YI+ NNLQDPNNK + C+ +LR + S
Sbjct: 165 LQAIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVFETDS 215
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPAL 90
G+ + RVW +IK+NNL+DP N ++ CD KL+ + +S + L L
Sbjct: 277 TGEKEMPSSEAVKRVWDHIKSNNLEDPANPTMILCDSKLKQLFGCESLTAMNRLTGL 333
>gi|241765352|ref|ZP_04763327.1| DNA topoisomerase III [Acidovorax delafieldii 2AN]
gi|241364917|gb|EER59860.1| DNA topoisomerase III [Acidovorax delafieldii 2AN]
Length = 969
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G ++R ++W YIK +NLQDP +K + D KLR++ GK + EL
Sbjct: 902 LAAVIGTEPVARPEAVKKLWEYIKAHNLQDPKDKRTIVADDKLRAVF-GKDSAGMFELAG 960
Query: 90 LIKLHF 95
++ H
Sbjct: 961 ILGNHL 966
>gi|171056886|ref|YP_001789235.1| SWIB/MDM2 domain-containing protein [Leptothrix cholodnii SP-6]
gi|170774331|gb|ACB32470.1| SWIB/MDM2 domain protein [Leptothrix cholodnii SP-6]
Length = 133
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R +VW YIK + LQD NK ++N D KL++I K +V + E+
Sbjct: 66 AALAAVIGNTPAPRTEVTKKVWEYIKKHQLQDAANKRMINADAKLKAIF-KKDQVSMFEM 124
Query: 88 PALI 91
LI
Sbjct: 125 TKLI 128
>gi|307111870|gb|EFN60104.1| hypothetical protein CHLNCDRAFT_49597 [Chlorella variabilis]
Length = 453
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMG 78
L +++F+G R+ R R+W YIK + LQDP +K + D KL+++ G
Sbjct: 242 LSPEMQDFLGVERLPRTQVVKRLWEYIKEHGLQDPKDKRTIIFDDKLKTLFTG 294
>gi|406988976|gb|EKE08806.1| hypothetical protein ACD_16C00251G0001 [uncultured bacterium]
Length = 124
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+L ++L G + SR +VW+YIK N LQD N+ ++N DQKL S+L G + +
Sbjct: 52 HLSASLATVCGTKKCSRPQVMKKVWAYIKKNKLQDNQNRRMINPDQKLGSVL-GDRPINM 110
Query: 85 AELPALIKLHF 95
++ + H
Sbjct: 111 LKMAGALSKHL 121
>gi|375108204|ref|ZP_09754465.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Burkholderiales bacterium JOSHI_001]
gi|374668935|gb|EHR73720.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Burkholderiales bacterium JOSHI_001]
Length = 143
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILM 77
A + + + L +G+ + R +VW YIK N LQD K ++N D KL+ I
Sbjct: 66 AAFMKAMTPSAALAAVIGEKPMPRTEVTKKVWEYIKKNGLQDKVKKTMINADAKLKEIF- 124
Query: 78 GKSRVELAELPALIKLHF 95
+++V + E+ LI H
Sbjct: 125 KQAQVSMFEMTKLINGHL 142
>gi|392576961|gb|EIW70091.1| hypothetical protein TREMEDRAFT_38764 [Tremella mesenterica DSM
1558]
Length = 316
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L +L F+G+ +SR R+W Y+K N+LQD +K + CD +L+S+ R+ +
Sbjct: 195 LSDSLAAFIGEPSLSRPQTVKRIWDYVKENDLQDQGDKRYILCDDRLKSVFH-TDRLHMF 253
Query: 86 ELPALIKLHF 95
+ L+ HF
Sbjct: 254 TMNKLLVPHF 263
>gi|242796038|ref|XP_002482715.1| SWIB/MDM2 domain protein [Talaromyces stipitatus ATCC 10500]
gi|218719303|gb|EED18723.1| SWIB/MDM2 domain protein [Talaromyces stipitatus ATCC 10500]
Length = 298
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 17 LANLID-LVNLPSTLREFVGQS----RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
L+ L+D V + S +R ++ S ++SR RVW YIK N+LQDP+++ + CD +
Sbjct: 211 LSELLDGEVAVSSQVRYYMLDSTDTKKLSRPQTVKRVWEYIKANDLQDPSDRRQIRCDDR 270
Query: 72 LRSILMGKSRVEL 84
+R ++ + RV +
Sbjct: 271 MR-LVFKQDRVHM 282
>gi|159130432|gb|EDP55545.1| SWIB/MDM2 domain protein [Aspergillus fumigatus A1163]
Length = 287
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G++ +SR R+W YI+ +NLQDPN++ + CD +R++
Sbjct: 223 GETTLSRPQTVKRLWQYIREHNLQDPNDRRHIRCDDAMRAVF 264
>gi|156058185|ref|XP_001595016.1| hypothetical protein SS1G_04824 [Sclerotinia sclerotiorum 1980]
gi|154702609|gb|EDO02348.1| hypothetical protein SS1G_04824 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 265
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL + L + VG+ +SR ++W +IK ++LQDP++K + CD K++ +
Sbjct: 190 NLSAALADLVGEPTLSRPQVVKKIWEHIKAHDLQDPSDKRQIICDDKMQLVF 241
>gi|146322353|ref|XP_749952.2| SWIB/MDM2 domain protein [Aspergillus fumigatus Af293]
gi|129556975|gb|EAL87914.2| SWIB/MDM2 domain protein [Aspergillus fumigatus Af293]
Length = 287
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G++ +SR R+W YI+ +NLQDPN++ + CD +R++
Sbjct: 223 GETTLSRPQTVKRLWQYIREHNLQDPNDRRHIRCDDAMRAVF 264
>gi|320587329|gb|EFW99809.1| swib mdm2 domain containing protein [Grosmannia clavigera kw1407]
Length = 285
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL L E VG S++ + ++W YIK ++LQDP +K + CD K++++ + RV +
Sbjct: 214 NLSDQLSELVGSSQVVK-----KLWVYIKAHDLQDPLDKRQIRCDDKMQAVFQ-QQRVGM 267
Query: 85 AELPALIKLHF 95
++ L+ H
Sbjct: 268 FQMNKLLGSHL 278
>gi|406987979|gb|EKE08139.1| hypothetical protein ACD_17C00325G0001 [uncultured bacterium]
Length = 86
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + R ++W+YIK N+LQD N+ +N D+KL I K V + E+
Sbjct: 20 LAAVVGDGPMPRTEVTKKLWAYIKKNDLQDAKNRRNINPDEKLGKIFGTKKAVNMFEMTK 79
Query: 90 LIKLHF 95
L+ H
Sbjct: 80 LVNKHL 85
>gi|427782205|gb|JAA56554.1| Putative swi/snf transcription activation complex subunit
[Rhipicephalus pulchellus]
Length = 540
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L I + R++ AE+P L +L P DP
Sbjct: 340 LWQYVKTHRLQDPHEREHINCDKYLEQIFQCQ-RMKFAEIPQRLHQLLHPPDP 391
>gi|154299113|ref|XP_001549977.1| hypothetical protein BC1G_11869 [Botryotinia fuckeliana B05.10]
gi|347840242|emb|CCD54814.1| hypothetical protein [Botryotinia fuckeliana]
Length = 268
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL + L + VG+ +SR ++W +IK+ NLQDP++K + CD K++ +
Sbjct: 193 NLSAALADLVGEPTLSRPQVVKKIWEHIKSLNLQDPSDKRQIICDDKMQLVF 244
>gi|338733782|ref|YP_004672255.1| hypothetical protein SNE_A18870 [Simkania negevensis Z]
gi|336483165|emb|CCB89764.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 76
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+N+ + L E VG+ + R ++W+YIK N QDP+NK + D+KL + K +
Sbjct: 4 MNISTELAEVVGKGPMPRTEVTKKLWAYIKKNKRQDPDNKRNIIPDEKLAKVFGSKKAIN 63
Query: 84 LAELPALIKLHF 95
+ ++ + H
Sbjct: 64 MFDMTKKVNKHL 75
>gi|449465075|ref|XP_004150254.1| PREDICTED: uncharacterized protein LOC101217066 [Cucumis sativus]
Length = 342
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L + L+ VGQ + R ++W+YI+ NNLQDP+NK + C+ +LR +
Sbjct: 159 LCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVF 212
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
R+W YIK N+L+DP N V CD KLR L G + +P ++ H
Sbjct: 290 RIWEYIKVNHLEDPLNPMAVLCDAKLRE-LFGCESISALGIPEVLGRH 336
>gi|29839931|ref|NP_829037.1| BAF60b domain-containing protein [Chlamydophila caviae GPIC]
gi|29834278|gb|AAP04915.1| BAF60b domain protein [Chlamydophila caviae GPIC]
Length = 87
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%)
Query: 20 LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
++ VN+ L VG+ + R +VW +IK NNLQDP NK + D L + K
Sbjct: 10 FMNPVNITPDLAAIVGEGPMPRTEIVKKVWEHIKKNNLQDPKNKRNILPDDALAKVFGSK 69
Query: 80 SRVELAELPALIKLHFPK 97
+ +++ ++ + H K
Sbjct: 70 NPIDMFQMTKALSAHIVK 87
>gi|393221096|gb|EJD06581.1| SWI/SNF complex protein [Fomitiporia mediterranea MF3/22]
Length = 416
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF-PKD 98
SR+G +W+YIK NNLQD ++ V+ D +L++ L V +LP L+ +F P D
Sbjct: 211 SRVGIVTALWNYIKLNNLQDKVDRRVIRLDNRLKA-LFHTENVSFQQLPELVNHYFQPPD 269
Query: 99 P 99
P
Sbjct: 270 P 270
>gi|302775110|ref|XP_002970972.1| hypothetical protein SELMODRAFT_441340 [Selaginella moellendorffii]
gi|300160954|gb|EFJ27570.1| hypothetical protein SELMODRAFT_441340 [Selaginella moellendorffii]
Length = 1418
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFP 96
+W +IK N LQ+P K ++ CD++LRS L GK V L + HFP
Sbjct: 438 LWDHIKANKLQNPRKKTIIRCDEQLRS-LFGKKAVTQRSLMKYLHNHFP 485
>gi|258569228|ref|XP_002585358.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906804|gb|EEP81205.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 264
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 33 FVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
F G+ +SR R+W YI+ N LQDP ++ + CD ++R++
Sbjct: 198 FDGEVSLSRPQTVKRIWQYIRENKLQDPADRRQIRCDDRMRAVF 241
>gi|384501394|gb|EIE91885.1| hypothetical protein RO3G_16596 [Rhizopus delemar RA 99-880]
Length = 151
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
PK+ L + L ++L +G R +SR R+W+YIK N LQDP ++ + CD L
Sbjct: 48 PKRNTGLSKPLILSASLSVIMGGDRELSRPEIVKRLWTYIKANQLQDPADRRFILCDNNL 107
Query: 73 RSILMGKSRV 82
RSI K RV
Sbjct: 108 RSIFQ-KDRV 116
>gi|255559072|ref|XP_002520558.1| brg-1 associated factor, putative [Ricinus communis]
gi|223540218|gb|EEF41791.1| brg-1 associated factor, putative [Ricinus communis]
Length = 397
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+ VG+ + R ++W+YI+ NNLQDP+NK + CD LR +
Sbjct: 223 LQAIVGEPALPRTEIVKQLWAYIRKNNLQDPSNKRKIICDDALRVVF 269
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 23 LVNLPSTLREFVGQS--RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
++ + L +F+G +++L RVW YIK N L+DP N V+ CD KLR +L +S
Sbjct: 319 VIVISEALAKFLGTGGREMTQLEASRRVWEYIKVNRLEDPLNSMVILCDAKLRELLGCES 378
>gi|147816096|emb|CAN72895.1| hypothetical protein VITISV_022315 [Vitis vinifera]
Length = 339
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
+ L+ VG+ + R ++W+YI+ NNLQDP+NK + CD LR + S
Sbjct: 168 TELQAVVGEPTMPRTQIVKQLWAYIRKNNLQDPSNKRKIICDDALRLVFETDS 220
>gi|449508329|ref|XP_004163283.1| PREDICTED: uncharacterized LOC101217066, partial [Cucumis sativus]
Length = 341
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L + L+ VGQ + R ++W+YI+ NNLQDP+NK + C+ +LR +
Sbjct: 153 GGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVF 211
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
R+W YIK N+L+DP N V CD KLR L G + +P ++ H
Sbjct: 289 RIWEYIKVNHLEDPLNPMAVLCDAKLRE-LFGCESISALGIPEVLGRH 335
>gi|449533967|ref|XP_004173941.1| PREDICTED: uncharacterized protein LOC101232239, partial [Cucumis
sativus]
Length = 211
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L + L+ VGQ + R ++W+YI+ NNLQDP+NK + C+ +LR +
Sbjct: 129 GGLNKLCGVSPELQAIVGQPELPRTEIVKQLWAYIRKNNLQDPSNKRKIICNDELRLVF 187
>gi|91790539|ref|YP_551491.1| DNA topoisomerase III [Polaromonas sp. JS666]
gi|91699764|gb|ABE46593.1| DNA topoisomerase III [Polaromonas sp. JS666]
Length = 992
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 27 PS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
PS +L +G ++R ++W YIK LQD NK +N D KL + GK +V +
Sbjct: 923 PSDSLAAVIGAEPVARTQVIKKLWDYIKAEGLQDAANKRAINADAKLLPVF-GKPQVTMF 981
Query: 86 ELPALIKLHF 95
EL ++ H
Sbjct: 982 ELAGIVGKHL 991
>gi|389694036|ref|ZP_10182130.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
gi|388587422|gb|EIM27715.1| SWIB domain-containing protein possibly involved in chromatin
remodeling [Microvirga sp. WSM3557]
Length = 102
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + R ++W YIK NNLQ+P NK + D KL+ I GK +V + E+
Sbjct: 37 LAAIVGSDPLPRGEVVSKIWDYIKKNNLQNPENKREILADDKLQPIF-GKPKVTMFEMNK 95
Query: 90 LIKLHF 95
+ H
Sbjct: 96 HLAQHL 101
>gi|357148363|ref|XP_003574734.1| PREDICTED: uncharacterized protein LOC100842878 [Brachypodium
distachyon]
Length = 416
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+ VG+ ++R ++W+YI+ NNLQDPNNK + C+ +LR +
Sbjct: 237 LQVIVGEPTMARTEIVKQLWAYIRRNNLQDPNNKRKIICNDELRLVF 283
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
G+ + RVW +IK+NNL+DP+N ++ CD KL+ + +S L
Sbjct: 349 TGEREMPHSEAVKRVWDHIKSNNLEDPSNPTLILCDSKLKDLFGCESLTALG 400
>gi|241561673|ref|XP_002401207.1| brahma/SWI2-related protein BRG-1 [Ixodes scapularis]
gi|215499817|gb|EEC09311.1| brahma/SWI2-related protein BRG-1 [Ixodes scapularis]
Length = 404
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + +NCD+ L I +R++ AE+P L +L P DP
Sbjct: 208 LWQYIKTHKLQDPHEREYINCDKYLEQIFQC-ARMKFAEIPQRLHQLLHPPDP 259
>gi|94496660|ref|ZP_01303236.1| hypothetical protein SKA58_18187 [Sphingomonas sp. SKA58]
gi|94424020|gb|EAT09045.1| hypothetical protein SKA58_18187 [Sphingomonas sp. SKA58]
Length = 113
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L E VG + R +VW YIK ++LQD ++ +N D KL I GK V + E+
Sbjct: 44 LAEIVGDKDLPRSEVVSKVWDYIKKHDLQDAKDRRQINADAKLEKIF-GKKSVSMFEMNK 102
Query: 90 LIKLHF 95
+ H
Sbjct: 103 HLSQHL 108
>gi|254586179|ref|XP_002498657.1| ZYRO0G15576p [Zygosaccharomyces rouxii]
gi|238941551|emb|CAR29724.1| ZYRO0G15576p [Zygosaccharomyces rouxii]
Length = 254
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L L E +G++ +R VW YIK NNLQ+PN++ + CD +++ + K
Sbjct: 119 LAEPLSELLGETESTRTQVVKSVWDYIKRNNLQNPNDRREILCDDRMKPVFGEK 172
>gi|449282637|gb|EMC89454.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Columba livia]
Length = 361
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W YIKTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 147 LARLLGIHTQTRSAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 205
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 206 RLTNLLLPPDP 216
>gi|413933851|gb|AFW68402.1| hypothetical protein ZEAMMB73_795146 [Zea mays]
Length = 1491
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 28 STLREFVGQSR------ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
S L EF+G R IS+ + + YIK NNL DP K+ + CD +L S L K R
Sbjct: 177 SELLEFIGHMRNGDNSYISQFDVQVLLLEYIKQNNLHDPRRKSQIICDARL-SNLFKKPR 235
Query: 82 VELAELPALIKLHF 95
V+ E+ L+++H+
Sbjct: 236 VDHFEMLKLLEMHY 249
>gi|118485716|gb|ABK94708.1| unknown [Populus trichocarpa]
Length = 385
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 23 LVNLPSTLREFVG--QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
LV + L EF+G + +++ RVW YIK L+DP N + CD KLR +L +S
Sbjct: 307 LVGISERLAEFLGTTEREMTQTEASRRVWEYIKLKQLEDPLNSMAIQCDTKLRDLLGCES 366
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+ VG+ + R ++W YI+ NNLQDP+NK + CD LR +
Sbjct: 211 LQAIVGEPALPRTEIVKQLWQYIRKNNLQDPSNKRKIICDDALRVVF 257
>gi|115488718|ref|NP_001066846.1| Os12g0507500 [Oryza sativa Japonica Group]
gi|113649353|dbj|BAF29865.1| Os12g0507500 [Oryza sativa Japonica Group]
Length = 55
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 58 QDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
QDPNNK ++ CD+KL+ I G+ RV E+ L+ HF K
Sbjct: 16 QDPNNKKIIVCDEKLKKIFGGRDRVGFLEISGLLNPHFQK 55
>gi|124265249|ref|YP_001019253.1| hypothetical protein Mpe_A0056 [Methylibium petroleiphilum PM1]
gi|124258024|gb|ABM93018.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 133
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + R ++W YIK + LQD K V+ D KL+ + GK++ ++ E+
Sbjct: 66 AALAAIVGDKPLPRTDVTKKIWEYIKKHKLQDAVQKRVIVADAKLKEVF-GKAKADMFEM 124
Query: 88 PALIKLHF 95
L+ H
Sbjct: 125 TKLVNSHL 132
>gi|320169950|gb|EFW46849.1| hypothetical protein CAOG_04807 [Capsaspora owczarzaki ATCC 30864]
Length = 616
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L +G + +R +W Y+K + LQD +K +VNCDQ L++ L ++ LA
Sbjct: 412 LASGLSRLLGVAVATRTDVLFGLWQYVKVHQLQDREDKRLVNCDQGLKA-LFQNDKIALA 470
Query: 86 ELPAL 90
++ L
Sbjct: 471 DMAVL 475
>gi|354544242|emb|CCE40965.1| hypothetical protein CPAR2_110030 [Candida parapsilosis]
Length = 287
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
L L+ + Q R SR +W+YIK NNLQ+P +K + CD KL+ + K+
Sbjct: 129 LSHELQNVIAQERCSRPQVVKHLWAYIKDNNLQNPADKRQIVCDDKLQKLFKKKT 183
>gi|221488645|gb|EEE26859.1| SWIB/MDM2 domain-containing protein, putative [Toxoplasma gondii
GT1]
Length = 1065
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 ANLIDLVNLPSTLREFV-----------GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVV 66
A L+ V L LRE V G+ R+SR +W Y KT NL + V
Sbjct: 150 ATLLREVRLSPLLREIVFAVYSEKRHEAGELRMSRPQVTQCIWQYAKTQNLPREGDGKTV 209
Query: 67 NCDQKLRSILMGKSRVEL-AELPALIKLHF 95
CD++LR++ G+ +V+L EL +L+ H
Sbjct: 210 WCDERLRNLFGGREKVDLFRELQSLLVPHL 239
>gi|390596308|gb|EIN05710.1| BAR-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1103
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Query: 12 DNPKKLANLIDLVNLPSTLR------EFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P ++ ++ L P + + +G SR+G +W+YIK LQD ++ +
Sbjct: 177 DQPTRIRVVLHLTQEPEVFKVHPELGDILGIKEESRVGVLQTLWNYIKIQGLQDKVDRRM 236
Query: 66 VNCDQKLRSILMGKSRVELAELPAL-IKLHFPKDP 99
+ D KL+ I G V +LP + ++ P DP
Sbjct: 237 IRADDKLKPIF-GADTVPFQQLPEIAMRFLLPADP 270
>gi|385305614|gb|EIF49575.1| swib domain-containing protein [Dekkera bruxellensis AWRI1499]
Length = 190
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 30 LREFVGQS-RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L F+G + ++SR+ +W YIK NNLQ+P N+ + CD +++ I K + + E
Sbjct: 54 LARFLGTTEQVSRVDAIRIMWKYIKENNLQNPKNRKEILCDDRMKPIFGDK--IGMFETS 111
Query: 89 ALIKLHF 95
+I HF
Sbjct: 112 KVISKHF 118
>gi|237837589|ref|XP_002368092.1| SWIB/MDM2 domain-containing protein [Toxoplasma gondii ME49]
gi|211965756|gb|EEB00952.1| SWIB/MDM2 domain-containing protein [Toxoplasma gondii ME49]
gi|221509142|gb|EEE34711.1| SWIB/MDM2 domain-containing protein, putative [Toxoplasma gondii
VEG]
Length = 1073
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 18 ANLIDLVNLPSTLREFV-----------GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVV 66
A L+ V L LRE V G+ R+SR +W Y KT NL + V
Sbjct: 150 ATLLREVRLSPLLREIVFAVYSEKRHEAGELRMSRPQVTQCIWQYAKTQNLPREGDGKTV 209
Query: 67 NCDQKLRSILMGKSRVEL-AELPALIKLHF 95
CD++LR++ G+ +V+L EL +L+ H
Sbjct: 210 WCDERLRNLFGGREKVDLFRELQSLLVPHL 239
>gi|159488925|ref|XP_001702451.1| SWIB domain-containing protein 1 [Chlamydomonas reinhardtii]
gi|158271119|gb|EDO96946.1| SWIB domain-containing protein 1 [Chlamydomonas reinhardtii]
Length = 275
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L+ F+G + R R+W YIK NNLQDP +K + D KL+++
Sbjct: 87 LSEPLQAFLGVESLPRTQVVKRLWEYIKANNLQDPKDKRKILLDDKLKTLF 137
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 3 PQGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNN 62
P+ VK + + +K V L L G+ + R W+Y+K L+DP N
Sbjct: 181 PKKVKTEMDEEKRKKNAFTKPVRLSPELAALTGKESMGRPEVTSFFWAYVKEKGLKDPAN 240
Query: 63 KNVVNCDQKLRSILMGKSR 81
+ CD L+ I G+ R
Sbjct: 241 GQFIICDAALKKI-TGEER 258
>gi|313235548|emb|CBY11003.1| unnamed protein product [Oikopleura dioica]
Length = 468
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W YIKTN LQDPN++ +N DQ LR I ++ A++P
Sbjct: 252 LARLLGIHTATRSVIVHALWQYIKTNKLQDPNDRIWINLDQYLRQIF-NTEKIRFADIPG 310
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 311 RLHPLLSPPDP 321
>gi|357459823|ref|XP_003600192.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
gi|355489240|gb|AES70443.1| Upstream activation factor subunit UAF30 [Medicago truncatula]
Length = 350
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L + L+ VGQ + R ++W+YIK NNLQDP+NK + C+ +LR +
Sbjct: 158 GGLNKLCGVSPELQVIVGQPAMPRTEIVKQLWAYIKKNNLQDPSNKRKIICNDELRVVF 216
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
R+W YIK N L+DP N + CD KL+ I G + +P ++ H
Sbjct: 298 RIWEYIKVNQLEDPVNPMAIMCDAKLQEIF-GCESISALGIPEVLGRH 344
>gi|242039111|ref|XP_002466950.1| hypothetical protein SORBIDRAFT_01g017290 [Sorghum bicolor]
gi|241920804|gb|EER93948.1| hypothetical protein SORBIDRAFT_01g017290 [Sorghum bicolor]
Length = 1650
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 28 STLREFVGQSR------ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
S L EF+G R IS+ + + YIK NNL+DP K+ + CD +L S L K R
Sbjct: 342 SELLEFIGHMRNGDSSYISQFDVQVLLLEYIKQNNLRDPRRKSQIICDARLSS-LFRKPR 400
Query: 82 VELAELPALIKLHF 95
V E+ L+++H+
Sbjct: 401 VGHLEMLKLLEMHY 414
>gi|296414408|ref|XP_002836893.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295632735|emb|CAZ81084.1| unnamed protein product [Tuber melanosporum]
Length = 235
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L L +G++ +SR R+W+Y+K NLQDP +K + CD ++ I K
Sbjct: 178 LSEPLSGLLGETMLSRPETVKRIWAYVKERNLQDPEDKRYILCDDSMKPIFGNK 231
>gi|398805193|ref|ZP_10564174.1| DNA topoisomerase III [Polaromonas sp. CF318]
gi|398092355|gb|EJL82770.1| DNA topoisomerase III [Polaromonas sp. CF318]
Length = 984
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 27 PS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
PS L +G ++R ++W YIK LQD NK +N D KL + GK +V +
Sbjct: 913 PSDALAAVIGAEPVARTQVIKKLWDYIKAEGLQDAANKRAINADAKLLPVF-GKPQVTMF 971
Query: 86 ELPALIKLHF 95
EL ++ H
Sbjct: 972 ELAGIVGKHL 981
>gi|388569327|ref|ZP_10155726.1| SWIB/MDM2 domain-containing protein [Hydrogenophaga sp. PBC]
gi|388263453|gb|EIK89044.1| SWIB/MDM2 domain-containing protein [Hydrogenophaga sp. PBC]
Length = 85
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G + R +W YIK NNLQ+P NK + D KL+++ GK V + E+
Sbjct: 20 LAAVIGSTPQPRTEVVKLMWEYIKANNLQNPKNKRNILADAKLKAVF-GKDEVNMFEMTG 78
Query: 90 LIKLHF 95
L+ H
Sbjct: 79 LVGKHL 84
>gi|363729614|ref|XP_427895.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Gallus
gallus]
Length = 549
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W YIKTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 335 LARLLGIHTQTRSAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 393
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 394 RLTNLLLPPDP 404
>gi|213402469|ref|XP_002172007.1| SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces japonicus
yFS275]
gi|212000054|gb|EEB05714.1| SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces japonicus
yFS275]
Length = 409
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + + +G S +R M +W YIK + LQD +K ++NCD+ L+ + G R+
Sbjct: 191 LSANFAQLLGISEGTRPTIVMALWQYIKFHRLQDMEDKRLINCDKGLQDVF-GTDRLYFP 249
Query: 86 ELPALI-KLHFPKDP 99
++P L+ K P DP
Sbjct: 250 KIPELMNKFLQPVDP 264
>gi|119172780|ref|XP_001238943.1| hypothetical protein CIMG_09965 [Coccidioides immitis RS]
gi|392869149|gb|EAS27629.2| SWIB/MDM2 domain-containing protein [Coccidioides immitis RS]
Length = 271
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 33 FVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
F G+ +SR R+W YI + LQDP+++ + CD+++R++
Sbjct: 205 FDGEISLSRPQSVKRIWQYIHDHGLQDPSDRRQIRCDERMRAVF 248
>gi|356562640|ref|XP_003549577.1| PREDICTED: uncharacterized protein LOC100804281 [Glycine max]
Length = 329
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 3 PQGVKKTVIDNPKK---LANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQD 59
PQ K++V K+ L + + L+ VG+ + R ++W+YIK NNLQD
Sbjct: 123 PQVPKESVQTGSKRRGGAGGLNKVCGVSPELQAVVGEPAMPRTEIVRQLWAYIKKNNLQD 182
Query: 60 PNNKNVVNCDQKLRSIL 76
P NK + CD LR +
Sbjct: 183 PGNKRKIICDDALRLVF 199
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 24 VNLPSTLREFVG-------QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
V + L +F+G QS RL VW YIK ++L+DP N V+ CD KL+ L
Sbjct: 249 VAISEALAKFLGTEGREMQQSEAIRL-----VWEYIKLHHLEDPLNSMVILCDAKLQE-L 302
Query: 77 MGKSRVELAELPALIKLH 94
+G + +P ++ H
Sbjct: 303 LGCESISALGIPEMLARH 320
>gi|403336306|gb|EJY67343.1| Brg-1 associated factor, putative [Oxytricha trifallax]
Length = 665
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 9 TVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
+V +NPKK L L + +G +RL +W YIK+N LQD +N+ +VNC
Sbjct: 340 SVENNPKKY-------RLSPQLTKILGMEEETRLRIIGALWQYIKSNRLQDSDNRELVNC 392
Query: 69 DQKLRSILMGKSRVEL 84
+ +L I G +VE
Sbjct: 393 NAELLEIF-GDDKVEF 407
>gi|25143862|ref|NP_491329.2| Protein SWSN-2.2 [Caenorhabditis elegans]
gi|351050534|emb|CCD65137.1| Protein SWSN-2.2 [Caenorhabditis elegans]
Length = 449
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 8 KTVIDNPKKLANLIDLVNLPSTLR------EFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
K D P K L+ L N P+ + + +G + +R +W YIKT+ LQDP
Sbjct: 206 KRAGDRPVKCRILLLLDNHPAKFKLHPRLAKVLGIATETRPKIIEALWQYIKTHGLQDPQ 265
Query: 62 NKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
++++NCD L S G +R+ E+P KLH
Sbjct: 266 ERDIINCDTFL-SQCFGVNRMRFMEVPN--KLH 295
>gi|29840743|ref|NP_829849.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila caviae
GPIC]
gi|29835093|gb|AAP05727.1| DNA topoisomerase I [Chlamydophila caviae GPIC]
Length = 861
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G ++R +VW YIK +NLQ P NK ++ D K ++I+ G V++ +LP L+
Sbjct: 797 IGDEPVARGEATKKVWKYIKDHNLQSPENKKMLVPDDKFQAII-GPEPVDMFQLPKLLNQ 855
Query: 94 HFPK 97
H K
Sbjct: 856 HLFK 859
>gi|357619892|gb|EHJ72292.1| putative brg-1 associated factor [Danaus plexippus]
Length = 520
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIK--LHFPKDP 99
+W Y+KT+ LQDP+ + V CD+ L I G +R++LAE+PA + LH P DP
Sbjct: 313 LWQYVKTHKLQDPHEREYVVCDKYLEQIF-GCARMKLAEVPARLGALLHAP-DP 364
>gi|268566849|ref|XP_002639829.1| Hypothetical protein CBG12176 [Caenorhabditis briggsae]
Length = 652
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 12 DNPKKLANLIDLVNLPSTLR------EFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K L+ L N PS + + +G + +R +W YIKT+ LQDP +++
Sbjct: 413 DRPVKCRVLLLLDNHPSKFKLHPRLAKVLGIAADTRPKIIEALWQYIKTHGLQDPQERDI 472
Query: 66 VNCDQKLRSILMGKSRVELAELPALIKLH 94
+NCD L G +R+ E+P KLH
Sbjct: 473 INCDTFLTQCF-GVARMRFMEVPN--KLH 498
>gi|326936497|ref|XP_003214290.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3-like,
partial [Meleagris gallopavo]
Length = 489
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W YIKTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 367 LARLLGIHTQTRSAIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 425
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 426 RLTNLLLPPDP 436
>gi|320031348|gb|EFW13318.1| hypothetical protein CPSG_10065 [Coccidioides posadasii str.
Silveira]
Length = 271
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 33 FVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
F G+ +SR R+W YI + LQDP+++ + CD+++R++
Sbjct: 205 FDGEISLSRPQSVKRIWKYIHDHGLQDPSDRRQIRCDERMRAVF 248
>gi|169606576|ref|XP_001796708.1| hypothetical protein SNOG_06332 [Phaeosphaeria nodorum SN15]
gi|160707031|gb|EAT86163.2| hypothetical protein SNOG_06332 [Phaeosphaeria nodorum SN15]
Length = 487
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
++ L L E + R G M +W Y + +LQ +++ CD KL+++ G+
Sbjct: 253 EIFRLSKPLAELLDTDEEDRAGVLMGIWEYARAQHLQQDDDERKFACDAKLKALFGGQDS 312
Query: 82 VELAELPALIKLHFPKDP 99
LP LIK H P
Sbjct: 313 FYFPNLPQLIKPHLTTLP 330
>gi|224086383|ref|XP_002307875.1| predicted protein [Populus trichocarpa]
gi|222853851|gb|EEE91398.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+ VG+ + R ++W YI+ NNLQDP+NK + CD LR +
Sbjct: 211 LQAIVGEPALPRTEIVKQLWQYIRKNNLQDPSNKRKIICDDALRVVF 257
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 23 LVNLPSTLREFVG--QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
LV + L EF+G + +++ RVW YIK L+DP N + CD KLR +L
Sbjct: 314 LVGISERLAEFLGTTEREMTQTEASRRVWEYIKLKQLEDPLNSMAIQCDTKLRDLL 369
>gi|403346097|gb|EJY72433.1| Brg-1 associated factor, putative [Oxytricha trifallax]
Length = 664
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 9 TVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
+V +NPKK L L + +G +RL +W YIK+N LQD +N+ +VNC
Sbjct: 339 SVENNPKKY-------RLSPQLTKILGMEEETRLRIIGALWQYIKSNRLQDSDNRELVNC 391
Query: 69 DQKLRSILMGKSRVEL 84
+ +L I G +VE
Sbjct: 392 NAELLEIF-GDDKVEF 406
>gi|303323957|ref|XP_003071966.1| SWIB/MDM2 domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111676|gb|EER29821.1| SWIB/MDM2 domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 216
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 33 FVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
F G+ +SR R+W YI + LQDP+++ + CD+++R++
Sbjct: 150 FDGEISLSRPQSVKRIWKYIHDHGLQDPSDRRQIRCDERMRAVF 193
>gi|83314990|ref|XP_730600.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490371|gb|EAA22165.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 111
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ S L+EF+ SR+ W YIK NNLQDP+ K + DQKL+ +L
Sbjct: 57 IKSPLKEFLNTDTASRVFVLKYAWKYIKDNNLQDPDMKRKIIPDQKLKQVL 107
>gi|428169722|gb|EKX38653.1| hypothetical protein GUITHDRAFT_144048 [Guillardia theta CCMP2712]
Length = 297
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L F+G R +W Y+K N+LQD +K + D+KL I + RV +
Sbjct: 165 FSEGLANFMGAPSGKRTEVVKAIWDYVKQNDLQDAKDKRFIMVDEKLEQIFGKRKRVHMF 224
Query: 86 ELPALIKLHF 95
++ L+ HF
Sbjct: 225 KMNQLLSPHF 234
>gi|119497381|ref|XP_001265449.1| SWIB/MDM2 domain protein [Neosartorya fischeri NRRL 181]
gi|119413611|gb|EAW23552.1| SWIB/MDM2 domain protein [Neosartorya fischeri NRRL 181]
Length = 287
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G++ +SR R+W YI+ ++LQDPN++ + CD +R++
Sbjct: 223 GETTLSRPQTVKRLWQYIREHDLQDPNDRRQIRCDDAMRAVF 264
>gi|358333785|dbj|GAA31139.2| upstream activation factor subunit UAF30, partial [Clonorchis
sinensis]
Length = 204
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L + +VGQ +SR R WS K NNL DP+NK V C++ + L G+ R
Sbjct: 132 LGLSDEMSAYVGQKTMSRAELVKRFWSLAKENNLFDPDNKQYVICNEDWQR-LFGQKRFR 190
Query: 84 LAELPALIKLH 94
+ + +K H
Sbjct: 191 MFGIAKHLKRH 201
>gi|182412732|ref|YP_001817798.1| SWIB/MDM2 domain-containing protein [Opitutus terrae PB90-1]
gi|177839946|gb|ACB74198.1| SWIB/MDM2 domain protein [Opitutus terrae PB90-1]
Length = 76
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + + R ++W+YIK N LQD K +N D+KL I K V + E+
Sbjct: 8 AALAAVVGSNPMPRTELTKKLWAYIKKNGLQDKKVKTQINADEKLLPIFNKKKSVSMFEM 67
Query: 88 PALIKLH 94
L+ H
Sbjct: 68 TKLVSGH 74
>gi|406860532|gb|EKD13590.1| putative SWIB/MDM2 domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 273
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 5 GVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKN 64
G V + PKK +L + L +G+ +SR ++W YIK +LQDP +K
Sbjct: 180 GSDGEVKEKPKK-GGFHKQYSLSAPLANVIGEPTLSRPQVVKKIWEYIKARDLQDPADKR 238
Query: 65 VVNCDQKLRSIL 76
+ CD KL+ +
Sbjct: 239 QILCDDKLQMVF 250
>gi|42565723|ref|NP_190429.2| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332644914|gb|AEE78435.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 183
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR-VEL 84
+ +L FVGQS +S +V Y +NL +P N + CD L++I G+ + V +
Sbjct: 41 VSESLARFVGQSEVSFSTAMEKVEQYTDDHNLWNPENIEEILCDDNLKTIFDGQDKVVGV 100
Query: 85 AELPALIKLHFP 96
E+ L+ HFP
Sbjct: 101 REMTELLLRHFP 112
>gi|334185823|ref|NP_001190034.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
gi|332644915|gb|AEE78436.1| SWIB complex BAF60b domain-containing protein [Arabidopsis
thaliana]
Length = 228
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR-VEL 84
+ +L FVGQS +S +V Y +NL +P N + CD L++I G+ + V +
Sbjct: 41 VSESLARFVGQSEVSFSTAMEKVEQYTDDHNLWNPENIEEILCDDNLKTIFDGQDKVVGV 100
Query: 85 AELPALIKLHFP 96
E+ L+ HFP
Sbjct: 101 REMTELLLRHFP 112
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 12/87 (13%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN------------NKNVVNCD 69
D+V + L FVGQS IS ++ Y + L D +K + CD
Sbjct: 136 DIVKVSEPLARFVGQSEISFDAALRKLLDYAFDHKLVDEGVTLLEFPWITKCSKWRIRCD 195
Query: 70 QKLRSILMGKSRVELAELPALIKLHFP 96
L++IL GK +V EL +L+ HFP
Sbjct: 196 DTLKTILDGKDKVGNKELSSLLMQHFP 222
>gi|409043948|gb|EKM53430.1| hypothetical protein PHACADRAFT_259812 [Phanerochaete carnosa
HHB-10118-sp]
Length = 253
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLR 73
PK+ L L E +G +++SR +W YIK +LQ+P +K + CD+K++
Sbjct: 162 PKRKGGFTKEYILSQPLAELLGVTQLSRPQAVKHIWVYIKEKDLQNPADKREIICDEKMK 221
Query: 74 SIL 76
I
Sbjct: 222 KIF 224
>gi|225469998|ref|XP_002278125.1| PREDICTED: uncharacterized protein LOC100267408 [Vitis vinifera]
gi|297741803|emb|CBI33108.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L+ VG+ + R ++W+YI+ NNLQDP+NK + CD LR + S ++ ++
Sbjct: 171 TELQAVVGEPTMPRTQIVKQLWAYIRKNNLQDPSNKRKIICDDALRLVFETDS-TDMFKM 229
Query: 88 PALIKLH-FPKDP 99
L+ H P +P
Sbjct: 230 NKLLAKHIIPLEP 242
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
RVW YIK N L+DP N + CD KL+ + +S L L + H K
Sbjct: 295 RVWEYIKVNQLEDPLNSMAILCDAKLQELFGCESISALGVSEMLARHHLFK 345
>gi|406987616|gb|EKE07914.1| hypothetical protein ACD_17C00463G0001, partial [uncultured
bacterium]
Length = 497
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 4 QGVKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNK 63
+G KK++ KK L+ VGQ I+R ++W YIK +LQDP NK
Sbjct: 405 KGSKKSMTQEKKKRTMTQPTYKASKELQAVVGQGEITRPEATKKIWDYIKAKHLQDPANK 464
Query: 64 NVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+ D L ++ G +++ +L + H K
Sbjct: 465 RRILPDTLLAKVI-GSEPIDMMKLSGFLSKHLKK 497
>gi|374288756|ref|YP_005035841.1| putative histone protein [Bacteriovorax marinus SJ]
gi|301167297|emb|CBW26879.1| putative histone protein [Bacteriovorax marinus SJ]
Length = 235
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK NNLQ+P NK + D L+ + GK V + EL
Sbjct: 168 ADLAAVIGDKAVPRTEAVKKMWDYIKKNNLQNPKNKRNILADDLLKKVF-GKKEVTMFEL 226
Query: 88 PALIKLHF 95
++ H
Sbjct: 227 AGILGKHL 234
>gi|297819474|ref|XP_002877620.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323458|gb|EFH53879.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR-VEL 84
+ +L FVGQS IS +V Y ++L +P N + CD L++I GK + V +
Sbjct: 41 VSESLARFVGQSEISFSTAMEKVEQYTDDHDLWNPENIEEILCDDNLKTIFDGKEKVVGV 100
Query: 85 AELPALIKLHFP 96
E+ L+ HFP
Sbjct: 101 REMTELLLRHFP 112
>gi|346978000|gb|EGY21452.1| hypothetical protein VDAG_02976 [Verticillium dahliae VdLs.17]
Length = 268
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL L E + + ++SR ++W +IK NNLQDP+NK + CD + ++ +V++
Sbjct: 192 NLSYPLAELLKEPQLSRPQVVKKLWEHIKGNNLQDPSNKRQIICDAPMEAVFK-LPKVDM 250
Query: 85 AELPALIKLHF 95
++ LI H
Sbjct: 251 FQMNKLIGSHL 261
>gi|260221882|emb|CBA30889.1| hypothetical protein Csp_C25810 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 650
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G I+R ++W YIK N LQD +K +N D KL ++ GK +V + EL
Sbjct: 583 AELAAVIGAEPIARPQVMKKLWDYIKANGLQDAKDKRSINADAKLLAVF-GKPQVTMFEL 641
Query: 88 PALIKLHF 95
+ H
Sbjct: 642 AGIAGKHL 649
>gi|115905855|ref|XP_001200842.1| PREDICTED: uncharacterized protein LOC764515 [Strongylocentrotus
purpuratus]
Length = 293
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 16 KLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSI 75
K + D++ P L +G R+SR R+W+ +K NL DP NK CD +L +
Sbjct: 206 KTGYVADMILSPE-LANIIGAERMSRHEVVKRMWAIVKERNLMDPKNKQYHICDDELLRV 264
Query: 76 LMGKSRVELAELPALIKLHFPKDPK 100
G+ R+ + +K H KDP+
Sbjct: 265 F-GQRRIRTFSMMKYLKGHI-KDPR 287
>gi|118397681|ref|XP_001031172.1| SWIB/MDM2 domain containing protein [Tetrahymena thermophila]
gi|89285496|gb|EAR83509.1| SWIB/MDM2 domain containing protein [Tetrahymena thermophila SB210]
Length = 551
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W YIK NLQD NK+ +NCD +RS+ + + ++ + ++ A
Sbjct: 300 LASIIGFEICTRSTALAAIWEYIKLKNLQDSENKSEINCDDAMRSVFL-QDKINIGQITA 358
Query: 90 LIK 92
++
Sbjct: 359 KLR 361
>gi|430811160|emb|CCJ31335.1| unnamed protein product [Pneumocystis jirovecii]
Length = 291
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH-FPKD 98
+R M +W YIK + LQD K ++NCD L+ I R+ ++P +I H P D
Sbjct: 86 TRTEIIMGLWEYIKFHKLQDEEEKRIINCDNNLKEIF-AMDRIFFPKIPEIINKHLLPLD 144
Query: 99 P 99
P
Sbjct: 145 P 145
>gi|343172022|gb|AEL98715.1| SWIB complex BAF60b domain-containing protein, partial [Silene
latifolia]
Length = 235
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L + L+ VGQ + R ++W+YI+ +NLQDP+NK + C+++LR +
Sbjct: 87 GGLNKLCGVTPQLQAIVGQPTMPRTEIVKQLWAYIRKHNLQDPSNKRKIICNEELRLVF 145
>gi|218191952|gb|EEC74379.1| hypothetical protein OsI_09704 [Oryza sativa Indica Group]
Length = 1796
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 30 LREFVG------QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
L EFVG QS IS+ + YIK NNL+DP K+ + CD +L L K+RV
Sbjct: 354 LLEFVGHMRDGDQSFISQFDVQALLLDYIKQNNLRDPQRKSQIICDSRLHR-LFRKTRVA 412
Query: 84 LAELPALIKLHF 95
E+ L+++HF
Sbjct: 413 HFEMLKLLEMHF 424
>gi|50294301|ref|XP_449562.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528876|emb|CAG62538.1| unnamed protein product [Candida glabrata]
Length = 233
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L L +F+G+ + R +VW YIK +NLQ P ++ + CD ++R I K
Sbjct: 141 LSDDLYKFLGERELPRTQVVKQVWDYIKEHNLQSPEDRREIICDDRMRPIFGDK 194
>gi|125584667|gb|EAZ25331.1| hypothetical protein OsJ_09143 [Oryza sativa Japonica Group]
Length = 1701
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 30 LREFVG------QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
L EFVG QS IS+ + YIK NNL+DP K+ + CD +L L K+RV
Sbjct: 354 LLEFVGHMRDGDQSFISQFDVQALLLDYIKQNNLRDPQRKSQIICDSRLHR-LFRKTRVA 412
Query: 84 LAELPALIKLHF 95
E+ L+++HF
Sbjct: 413 HFEMLKLLEMHF 424
>gi|405123222|gb|AFR97987.1| hypothetical protein CNAG_01790 [Cryptococcus neoformans var.
grubii H99]
Length = 250
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
VG +SR +W+Y+K NLQD N+K + CD KLR +
Sbjct: 183 VGTHSLSRPQVVKHIWAYVKERNLQDSNDKRYILCDDKLREVF 225
>gi|255950706|ref|XP_002566120.1| Pc22g22250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593137|emb|CAP99513.1| Pc22g22250 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 270
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+NL L +G+ +SR +VW YI+ N LQDP+++ + CD +R++
Sbjct: 195 MNLSEPLSALLGELTLSRPQTVKKVWQYIRENELQDPSDRRQILCDDAMRAVF 247
>gi|343183589|gb|AEM01134.1| DNA topoisomerase I [Estrella lausannensis]
Length = 872
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L++F+ + +SR VW YIK LQD N+K ++ D+KL +L V
Sbjct: 798 LTLTGPLKDFLAKDTMSRGDITKEVWVYIKEKGLQDANDKRLIVPDKKLAKVLGTDEPVN 857
Query: 84 LAELPALI 91
+ +LP L+
Sbjct: 858 MFKLPGLL 865
>gi|328769562|gb|EGF79606.1| hypothetical protein BATDEDRAFT_89688 [Batrachochytrium
dendrobatidis JAM81]
Length = 321
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 23 LVNLPSTLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
L ++L + +G + ISR+ ++W YIK +NLQDP ++ + CD+KL++++ K R
Sbjct: 116 LFGTSNSLAQLLGTTDPISRIDLNKQLWHYIKEHNLQDPIDRRFILCDEKLKAVMKSK-R 174
Query: 82 VELAELPALIKLHFPKD 98
V + + + H D
Sbjct: 175 VNMFSMNKKLSNHLYSD 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 16 KLANLIDLVNLPSTLR-EF---VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
KLA + +N P L EF VG S +SR +W YIK LQDP NK ++ CD+K
Sbjct: 222 KLAAELSPLNEPRILSPEFASIVGVSELSRAQALKEIWLYIKDKKLQDPLNKRMIICDEK 281
Query: 72 LRSIL 76
+++
Sbjct: 282 FKNMF 286
>gi|390597337|gb|EIN06737.1| SWIB-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 296
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++SR R+W YI+ NNLQ+PN+K + CD+KL+ I
Sbjct: 234 KLSRPQVVKRMWEYIRENNLQNPNDKREIICDEKLQRIF 272
>gi|343172024|gb|AEL98716.1| SWIB complex BAF60b domain-containing protein, partial [Silene
latifolia]
Length = 235
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L + L+ VGQ + R ++W+YI+ +NLQDP+NK + C+++LR +
Sbjct: 87 GGLNKLCGVTPQLQAIVGQPTMPRTEIVKQLWAYIRKHNLQDPSNKRKIICNEELRLVF 145
>gi|346320816|gb|EGX90416.1| SWIB/MDM2 domain protein [Cordyceps militaris CM01]
Length = 267
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL +L G++++SR ++W +IK N+LQDP++K + CD+++ ++
Sbjct: 192 NLSESLSVLCGETQLSRPQVVKKLWEHIKGNDLQDPSDKRQILCDERMFAVF 243
>gi|6523091|emb|CAB62349.1| putative protein [Arabidopsis thaliana]
Length = 205
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR-VEL 84
+ +L FVGQS +S +V Y +NL +P N + CD L++I G+ + V +
Sbjct: 41 VSESLARFVGQSEVSFSTAMEKVEQYTDDHNLWNPENIEEILCDDNLKTIFDGQDKVVGV 100
Query: 85 AELPALIKLHFP 96
E+ L+ HFP
Sbjct: 101 REMTELLLRHFP 112
>gi|388579586|gb|EIM19908.1| hypothetical protein WALSEDRAFT_61248 [Wallemia sebi CBS 633.66]
Length = 468
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + +G SR G +W+Y+K NNL D ++ ++ D L+SI G + +LP
Sbjct: 249 LSQLLGIKEDSRAGIITHMWAYVKQNNLLDKEDRRIIKADDNLKSIF-GCDSIYYHQLPE 307
Query: 90 LI-KLHFPKDP 99
++ K P DP
Sbjct: 308 VVQKFLLPVDP 318
>gi|384493432|gb|EIE83923.1| hypothetical protein RO3G_08628 [Rhizopus delemar RA 99-880]
Length = 248
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L +L + + ++L M +W+Y K + LQD +K ++ CD +L + L G +V +
Sbjct: 167 LSPSLSDLLDAKVENKLQIVMGIWNYCKVHKLQDHEDKRIIRCDNRL-AQLFGYPQVHFS 225
Query: 86 ELPALIKLHFPK-DP 99
++P LI H + DP
Sbjct: 226 QIPELINQHLTRPDP 240
>gi|384454012|ref|YP_005666608.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci C19/98]
gi|334692793|gb|AEG86012.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci C19/98]
Length = 855
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D+K +I+ G V++ +LP L+
Sbjct: 791 IGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQ 849
Query: 94 HFPK 97
H K
Sbjct: 850 HLFK 853
>gi|83765756|dbj|BAE55899.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 270
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW+YI+ + LQDP ++ + CD+ +R++
Sbjct: 206 GEESLSRPQTVKKVWAYIREHELQDPTDRRQIRCDEPMRAVF 247
>gi|330444183|ref|YP_004377169.1| hypothetical protein G5S_0481 [Chlamydophila pecorum E58]
gi|328807293|gb|AEB41466.1| BAF60b domain protein [Chlamydophila pecorum E58]
Length = 87
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V + S L VG+ + R +VW YIK +NLQDP NK + D L + + ++
Sbjct: 14 VKISSELAVIVGEGPMPRTEIVKKVWEYIKKHNLQDPKNKRNILPDASLAKVFGTHNAID 73
Query: 84 LAELPALIKLHFPK 97
+ ++ I H K
Sbjct: 74 MFQMTKAISAHIVK 87
>gi|282891548|ref|ZP_06300039.1| hypothetical protein pah_c180o026 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174870|ref|YP_004651680.1| DNA topoisomerase 1 [Parachlamydia acanthamoebae UV-7]
gi|281498516|gb|EFB40844.1| hypothetical protein pah_c180o026 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479228|emb|CCB85826.1| DNA topoisomerase 1 [Parachlamydia acanthamoebae UV-7]
Length = 864
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L +L L + VG + +SR +VW YI+ + LQD NK +N D L + G +
Sbjct: 788 LQDLSPELAQVVGANEMSRGDVMKKVWDYIRAHQLQDSANKRQINPDATLAKVFGGPEPM 847
Query: 83 ELAELPALIKLHFPK 97
++ ++ A++ H K
Sbjct: 848 DMFKMTAVLGKHIHK 862
>gi|2832686|emb|CAA16786.1| putative protein [Arabidopsis thaliana]
gi|7269082|emb|CAB79191.1| putative protein [Arabidopsis thaliana]
Length = 369
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L VG+ + R ++W+YI+ NNLQDP+NK + CD LR +
Sbjct: 207 LEVVVGEPALPRTEIVRQLWAYIRKNNLQDPSNKRKIICDDALRVVF 253
>gi|406592894|ref|YP_006740074.1| DNA topoisomerase I [Chlamydia psittaci CP3]
gi|406594463|ref|YP_006742155.1| DNA topoisomerase I [Chlamydia psittaci MN]
gi|410858916|ref|YP_006974856.1| DNA topoisomerase I-fused to SWI domain [Chlamydia psittaci 01DC12]
gi|405782895|gb|AFS21643.1| DNA topoisomerase I [Chlamydia psittaci MN]
gi|405788766|gb|AFS27509.1| DNA topoisomerase I [Chlamydia psittaci CP3]
gi|410811811|emb|CCO02466.1| DNA topoisomerase I-fused to SWI domain [Chlamydia psittaci 01DC12]
Length = 862
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D+K +I+ G V++ +LP L+
Sbjct: 798 IGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQ 856
Query: 94 HFPK 97
H K
Sbjct: 857 HLFK 860
>gi|89898650|ref|YP_515760.1| swiB complex protein [Chlamydophila felis Fe/C-56]
gi|89332022|dbj|BAE81615.1| swiB complex protein [Chlamydophila felis Fe/C-56]
Length = 87
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 20 LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
++ VN+ + L VG+ + R +VW +IK +NLQDP NK + D L + K
Sbjct: 10 FMNPVNVSADLEAIVGKGPMPRTEIVKKVWEHIKKHNLQDPKNKRNILPDDALAKVFGSK 69
Query: 80 SRVELAELPALIKLHFPK 97
+ +++ ++ + H K
Sbjct: 70 NPIDMFQMTKALSSHIVK 87
>gi|238483641|ref|XP_002373059.1| SWIB/MDM2 domain protein [Aspergillus flavus NRRL3357]
gi|317139998|ref|XP_001817901.2| SWIB/MDM2 domain protein [Aspergillus oryzae RIB40]
gi|220701109|gb|EED57447.1| SWIB/MDM2 domain protein [Aspergillus flavus NRRL3357]
Length = 277
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW+YI+ + LQDP ++ + CD+ +R++
Sbjct: 213 GEESLSRPQTVKKVWAYIREHELQDPTDRRQIRCDEPMRAVF 254
>gi|353240845|emb|CCA72694.1| related to SWI/SNF complex protein-Laccaria bicolor [Piriformospora
indica DSM 11827]
Length = 433
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
LP L + +G +R W Y+K N LQD N++ ++ D KLR++ +S +
Sbjct: 122 LPPVLAQLLGIYEDTRGNICGAFWHYVKANGLQDKNDRKLIKLDDKLRAVFKYES-LNFQ 180
Query: 86 ELPALIKLHF-PKDP 99
++ L+ +H P DP
Sbjct: 181 DIITLLNMHLTPPDP 195
>gi|329943328|ref|ZP_08292102.1| DNA topoisomerase I [Chlamydophila psittaci Cal10]
gi|332287904|ref|YP_004422805.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 6BC]
gi|384451074|ref|YP_005663674.1| DNA topoisomerase I [Chlamydophila psittaci 6BC]
gi|384452059|ref|YP_005664657.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 01DC11]
gi|384453033|ref|YP_005665630.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 08DC60]
gi|384454991|ref|YP_005667586.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 02DC15]
gi|392377133|ref|YP_004064911.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila psittaci
RD1]
gi|407454570|ref|YP_006733678.1| DNA topoisomerase I [Chlamydia psittaci 84/55]
gi|407455831|ref|YP_006734722.1| DNA topoisomerase I [Chlamydia psittaci GR9]
gi|407457257|ref|YP_006735830.1| DNA topoisomerase I [Chlamydia psittaci VS225]
gi|313848476|emb|CBY17480.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila psittaci
RD1]
gi|325506763|gb|ADZ18401.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 6BC]
gi|328814875|gb|EGF84865.1| DNA topoisomerase I [Chlamydophila psittaci Cal10]
gi|328915168|gb|AEB56001.1| DNA topoisomerase I [Chlamydophila psittaci 6BC]
gi|334693769|gb|AEG86987.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 01DC11]
gi|334694748|gb|AEG87965.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 02DC15]
gi|334695722|gb|AEG88938.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci 08DC60]
gi|405781329|gb|AFS20079.1| DNA topoisomerase I [Chlamydia psittaci 84/55]
gi|405782374|gb|AFS21123.1| DNA topoisomerase I [Chlamydia psittaci GR9]
gi|405784518|gb|AFS23265.1| DNA topoisomerase I [Chlamydia psittaci VS225]
Length = 862
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D+K +I+ G V++ +LP L+
Sbjct: 798 IGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQ 856
Query: 94 HFPK 97
H K
Sbjct: 857 HLFK 860
>gi|406601457|emb|CCH46907.1| hypothetical protein BN7_6512 [Wickerhamomyces ciferrii]
Length = 425
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G + +++ +W YI+ NNLQ P +K ++NCD+ L S L R +L
Sbjct: 222 LSSLLGVNELTQHDAVYSIWQYIQFNNLQAPEDKRIINCDENL-SKLFNVPRFNFRDLIE 280
Query: 90 LIKLHF-PKDP 99
L+ H PK P
Sbjct: 281 LLSKHLSPKPP 291
>gi|392563707|gb|EIW56886.1| SWI/SNF complex 60 kDa subunit [Trametes versicolor FP-101664 SS1]
Length = 432
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 12 DNPKKLANLIDLVNLPST------LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K+ ++ L P L +G SR G +W+YIKT NLQD ++ V
Sbjct: 195 DTPTKVRIVMHLEQQPEQYKVHPELGNVLGVKEDSRTGVIQALWNYIKTQNLQDKVDRRV 254
Query: 66 VNCDQKLRSILMGKSRVELAELPALI-KLHFPKDP 99
V D +LR I + LP L+ + P DP
Sbjct: 255 VRADARLRPIFNADT-AYFQHLPELVNRFLLPPDP 288
>gi|407458569|ref|YP_006736874.1| DNA topoisomerase I [Chlamydia psittaci WS/RT/E30]
gi|405784806|gb|AFS23552.1| DNA topoisomerase I [Chlamydia psittaci WS/RT/E30]
Length = 862
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D+K +I+ G V++ +LP L+
Sbjct: 798 IGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQ 856
Query: 94 HFPK 97
H K
Sbjct: 857 HLFK 860
>gi|356522045|ref|XP_003529660.1| PREDICTED: uncharacterized protein LOC100788173 [Glycine max]
Length = 332
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+ VG+ + R ++W+YIK NNLQDP NK + CD LR +
Sbjct: 156 LQAVVGEPAMPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVF 202
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
VW YIK ++L+DP N V+ CD KL+ L+G + +P ++ H
Sbjct: 278 VWEYIKLHHLEDPLNAMVILCDAKLQE-LLGCESISALGIPEMLARH 323
>gi|449071635|ref|YP_007438715.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci Mat116]
gi|449040143|gb|AGE75567.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
psittaci Mat116]
Length = 734
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D+K +I+ G V++ +LP L+
Sbjct: 670 IGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQ 728
Query: 94 HFPK 97
H K
Sbjct: 729 HLFK 732
>gi|406593941|ref|YP_006741120.1| DNA topoisomerase I [Chlamydia psittaci NJ1]
gi|405789813|gb|AFS28555.1| DNA topoisomerase I [Chlamydia psittaci NJ1]
Length = 862
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D+K +I+ G V++ +LP L+
Sbjct: 798 IGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQ 856
Query: 94 HFPK 97
H K
Sbjct: 857 HLFK 860
>gi|407461185|ref|YP_006738960.1| DNA topoisomerase I [Chlamydia psittaci WC]
gi|405787519|gb|AFS26263.1| DNA topoisomerase I [Chlamydia psittaci WC]
Length = 862
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D+K +I+ G V++ +LP L+
Sbjct: 798 IGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNR 856
Query: 94 HFPK 97
H K
Sbjct: 857 HLFK 860
>gi|407459812|ref|YP_006737915.1| DNA topoisomerase I [Chlamydia psittaci M56]
gi|405786557|gb|AFS25302.1| DNA topoisomerase I [Chlamydia psittaci M56]
Length = 862
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D+K +I+ G V++ +LP L+
Sbjct: 798 IGPEPVGRGEATKKVWQYIKDHNLQSPENKKMLLPDEKFEAII-GPEPVDMFQLPKLLNQ 856
Query: 94 HFPK 97
H K
Sbjct: 857 HLFK 860
>gi|402076394|gb|EJT71817.1| hypothetical protein GGTG_11070 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 283
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 33 FVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIK 92
G+ +SR ++W +IK N+LQDPN+K + CD+ ++++ +S+V++ ++ LI
Sbjct: 216 LCGEPVLSRPQVVKKLWEHIKGNDLQDPNDKRQILCDEMMQAVFK-QSKVDMFQMNKLIG 274
Query: 93 LHF 95
H
Sbjct: 275 NHL 277
>gi|255645561|gb|ACU23275.1| unknown [Glycine max]
Length = 332
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+ VG+ + R ++W+YIK NNLQDP NK + CD LR +
Sbjct: 156 LQAVVGEPAMPRTEIVRQLWAYIKKNNLQDPGNKRKIICDDALRLVF 202
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
VW YIK +L+DP N V+ CD KL+ +L +S L +P ++ H
Sbjct: 278 VWEYIKLPHLEDPLNAMVILCDAKLQELLGCESIFALG-IPEMLARH 323
>gi|187937044|ref|NP_001120778.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Danio rerio]
gi|154091352|gb|ABS57470.1| Smarcd3b [Danio rerio]
Length = 476
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W Y+KTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 262 LARLLGIHTQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 320
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 321 RLTNLLLPPDP 331
>gi|430813358|emb|CCJ29281.1| unnamed protein product [Pneumocystis jirovecii]
Length = 296
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH-FPKD 98
+R M +W YIK + LQD K ++NCD L+ I R+ ++P +I H P D
Sbjct: 231 TRTEIIMGLWEYIKFHKLQDEEEKRIINCDNNLKEIF-AMDRIFFPKIPEIINKHLLPLD 289
Query: 99 P 99
P
Sbjct: 290 P 290
>gi|225460811|ref|XP_002275854.1| PREDICTED: uncharacterized protein LOC100264067 [Vitis vinifera]
gi|297737516|emb|CBI26717.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L+ VGQ + R ++W+YI+ NNLQDP+NK + C+ +LR +
Sbjct: 157 LQTIVGQPALPRTEIVKQLWAYIRRNNLQDPSNKRKIICNDELRLVF 203
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
RVW YIK N+L+DP N V+ CD KL+ I +S L L++ H K
Sbjct: 279 RVWEYIKVNHLEDPLNSMVILCDAKLQEIFGCESISALGIPEILMRHHLCK 329
>gi|150866001|ref|XP_001385450.2| hypothetical protein PICST_61327 [Scheffersomyces stipitis CBS
6054]
gi|149387257|gb|ABN67421.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 149
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L + L + +G SR SR ++W YIK N LQ+P++K + CD+KL+ +
Sbjct: 82 LSTELSDILGISRTSRPQVVKQLWIYIKDNELQNPDDKRQIMCDEKLQKLF 132
>gi|410909347|ref|XP_003968152.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3-like
[Takifugu rubripes]
Length = 481
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W YIKTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 267 LARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 325
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 326 RLTNLLLPPDP 336
>gi|410919329|ref|XP_003973137.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like isoform
1 [Takifugu rubripes]
Length = 514
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L+ I + R++ +E+P L L P DP
Sbjct: 318 LWQYVKTHKLQDPHEREFINCDKYLQQIFEAQ-RMKFSEIPQRLHALLMPPDP 369
>gi|452001023|gb|EMD93483.1| hypothetical protein COCHEDRAFT_1192808 [Cochliobolus
heterostrophus C5]
Length = 505
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
++ L L E + R G M +W Y ++ +LQ +++ CD +L+++ G+
Sbjct: 271 EVFRLSKPLAELLDTDEEDRAGVLMGIWEYARSQHLQQEDDERKFACDARLKALFGGQDH 330
Query: 82 VELAELPALIKLHFPKDP 99
LP LIK H P
Sbjct: 331 FFFPNLPQLIKPHLTTLP 348
>gi|451854863|gb|EMD68155.1| hypothetical protein COCSADRAFT_80235 [Cochliobolus sativus ND90Pr]
Length = 494
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
++ L L E + R G M +W Y ++ +LQ +++ CD +L+++ G+
Sbjct: 260 EVFRLSKPLAELLDTDEEDRAGVLMGIWEYARSQHLQQEDDERKFACDARLKALFGGQDH 319
Query: 82 VELAELPALIKLHFPKDP 99
LP LIK H P
Sbjct: 320 FFFPNLPQLIKPHLTTLP 337
>gi|307172235|gb|EFN63752.1| Upstream activation factor subunit UAF30 [Camponotus floridanus]
Length = 262
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG +++R +VWS IK NL DP NK CD++L ++ G R
Sbjct: 190 ITLSPELAAVVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVI-GVKRFR 248
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 249 TFGMMKYLKNHF 260
>gi|427779735|gb|JAA55319.1| Putative swi/snf transcription activation complex subunit
[Rhipicephalus pulchellus]
Length = 596
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L I + R++ AE+P L +L P DP
Sbjct: 340 LWQYVKTHRLQDPHEREHINCDKYLEQIFQCQ-RMKFAEIPQRLHQLLHPPDP 391
>gi|223998538|ref|XP_002288942.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976050|gb|EED94378.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 304
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L G+ + R +W YI+ N LQ+P +K +NCD+ L ++ G+S+V +
Sbjct: 199 LSDDLTAVTGKRILPRPQVTQALWKYIRENGLQNPEDKREINCDELLSRVMGGESKVTMF 258
Query: 86 ELPALIKLHF 95
+ I H
Sbjct: 259 SMNKYITPHL 268
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 26 LPSTLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ L F+G R ++R +WSYIK NNLQ+P NK + D K++++
Sbjct: 86 ISEDLANFLGTGRQMARTEIVKALWSYIKENNLQNPENKREIMLDAKMQAVF 137
>gi|440634031|gb|ELR03950.1| hypothetical protein GMDG_06478 [Geomyces destructans 20631-21]
Length = 275
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLR 73
L L VG+++ SR ++W++IK N+LQDP++K + CD K++
Sbjct: 192 LSEPLAALVGETQSSRPQVVKKIWAHIKGNDLQDPSDKRQIFCDNKMK 239
>gi|400597714|gb|EJP65444.1| DEK C terminal domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 286
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL +L G++++SR ++W +IK N LQDP +K + CD ++ ++ + RV++
Sbjct: 211 NLSDSLSVLCGETQLSRPQVVKKLWEHIKANELQDPKDKRQILCDDRMFAVFR-QPRVDM 269
Query: 85 AELPALIKLHF 95
++ I H
Sbjct: 270 FKMNKEIGQHL 280
>gi|384496998|gb|EIE87489.1| hypothetical protein RO3G_12200 [Rhizopus delemar RA 99-880]
Length = 335
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 8 KTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVN 67
K V NP+ + +V + L + + + SR ++W YI+ +NLQ+P +K +++
Sbjct: 217 KKVKKNPRDMP----IVKVLPPLSDIIKANYCSRTQTVSKIWEYIREHNLQNPADKRLID 272
Query: 68 CDQKLRSILMGKSRV 82
CD+K + + G+ ++
Sbjct: 273 CDEKFKELCDGQVQI 287
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + SR ++W YI+ + LQD N+K +NCD + + G R+ +
Sbjct: 130 LSNIIKTEYCSRTQTVSKMWDYIREHQLQDENDKRFINCDDYFKELCDGTERINAFTINK 189
Query: 90 LIKLHFPK 97
++ +F K
Sbjct: 190 YLQKYFEK 197
>gi|224083739|ref|XP_002307106.1| predicted protein [Populus trichocarpa]
gi|222856555|gb|EEE94102.1| predicted protein [Populus trichocarpa]
Length = 114
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 21/109 (19%)
Query: 4 QGVKKTVIDNPKKLANLIDLVNL-------PST---LREFVG-----QSRISRLGCFMRV 48
+ +KK V+ +P A+ +VN PS+ L +F+G S IS+L +
Sbjct: 10 RSLKKAVVKHPA-YASWGSVVNAQVKAKLTPSSKCNLGKFLGIRDPPASDISQL-----I 63
Query: 49 WSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+IK NN Q+P K V ++KLR++L GK RV ++E+ L+ FPK
Sbjct: 64 TRFIKLNNRQNPGMKKDVLSEEKLRTMLEGKERVGVSEIAKLLAQQFPK 112
>gi|170739254|ref|YP_001767909.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. 4-46]
gi|168193528|gb|ACA15475.1| SWIB/MDM2 domain protein [Methylobacterium sp. 4-46]
Length = 120
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG I R +VW YI+T++LQ+P NK + D KL+ + GK + + E+
Sbjct: 55 LGAIVGTKPIPRGEVVSKVWDYIRTHSLQNPENKREILADDKLKKVF-GKDKATMFEMNK 113
Query: 90 LIKLHF 95
+ H
Sbjct: 114 YLAQHL 119
>gi|50551591|ref|XP_503270.1| YALI0D25344p [Yarrowia lipolytica]
gi|49649138|emb|CAG81474.1| YALI0D25344p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Query: 16 KLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSI 75
+L D L L E + S+ + +W YIK ++LQ K + CD+ LR
Sbjct: 172 QLKEYPDRARLSEPLSEILALDEASKSDIILALWQYIKFHDLQQTEEKRNIKCDEPLRQ- 230
Query: 76 LMGKSRVELAELPALIKLH-FPKDP 99
L G++ V E+ LI H PK+P
Sbjct: 231 LFGRNTVTFPEIMELITPHLLPKEP 255
>gi|384248875|gb|EIE22358.1| hypothetical protein COCSUDRAFT_42687 [Coccomyxa subellipsoidea
C-169]
Length = 489
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
+L L L + G SR +W YI N LQ PN ++VNCD++L + L+G
Sbjct: 255 ELFTLSPALADLTGMQHGSRQRILHALWHYISLNKLQMPNQADLVNCDERLGA-LLGDKV 313
Query: 82 VELAELPALI 91
V+L+ L I
Sbjct: 314 VKLSSLSERI 323
>gi|406986559|gb|EKE07122.1| hypothetical protein ACD_18C00179G0006 [uncultured bacterium]
Length = 91
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 20 LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L+ +NL L VG + R ++W YIK NLQ+P NK + D L L GK
Sbjct: 9 LLKPLNLSPELEAVVGPGPMPRSQVVKKLWEYIKEKNLQNPANKRNIFADDLLMP-LFGK 67
Query: 80 SRVELAELPALIKLHF 95
V + E+ L+ H
Sbjct: 68 KEVTMFEMTKLVSPHI 83
>gi|405959949|gb|EKC25921.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Crassostrea gigas]
Length = 504
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L +G +R +W YIKT+ LQD + + +NCD+ L I K R++ A
Sbjct: 286 LDSRLARILGVHTQTRSVIINALWQYIKTHRLQDHHEREYINCDKYLEQIFECK-RMKFA 344
Query: 86 ELPALIKLH---FPKDP 99
E+P KLH P DP
Sbjct: 345 EIPG--KLHGLLMPPDP 359
>gi|330938137|ref|XP_003305695.1| hypothetical protein PTT_18606 [Pyrenophora teres f. teres 0-1]
gi|311317201|gb|EFQ86235.1| hypothetical protein PTT_18606 [Pyrenophora teres f. teres 0-1]
Length = 491
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
++ L L E + R G M +W Y ++ +LQ ++ CD +L+++ G+
Sbjct: 257 EVFRLSKPLAELLDTDEEDRAGVLMGIWEYARSQHLQQEEDERKFACDARLKALFGGQDH 316
Query: 82 VELAELPALIKLHFPKDP 99
LP LIK H P
Sbjct: 317 FFFPNLPQLIKQHLTTLP 334
>gi|410919331|ref|XP_003973138.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like isoform
2 [Takifugu rubripes]
Length = 442
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L+ I + R++ +E+P L L P DP
Sbjct: 287 LWQYVKTHKLQDPHEREFINCDKYLQQIFEAQ-RMKFSEIPQRLHALLMPPDP 338
>gi|168052120|ref|XP_001778499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670097|gb|EDQ56672.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 396
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 39 ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFP 96
+SR +W YIK N LQ+P N + CDQ+LR ++ K V E+ L+ HFP
Sbjct: 154 LSRFAIHKLLWIYIKQNKLQNPKKMNEIICDQQLR-LIFEKDSVGQFEMFKLLNKHFP 210
>gi|47217478|emb|CAG10247.1| unnamed protein product [Tetraodon nigroviridis]
Length = 621
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W YIKTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 309 LARLLGIHTQTRSCIIQALWQYIKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 367
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 368 RLTNLLLPPDP 378
>gi|452825650|gb|EME32645.1| hypothetical protein Gasu_00170 [Galdieria sulphuraria]
Length = 291
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 11 IDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQ 70
+ P KL+NL L + G +SR +VW YIK +NLQ ++K ++CD
Sbjct: 209 LQKPLKLSNL---------LSQICGAEYLSRSQVVKKVWEYIKLHNLQKASDKRNISCDA 259
Query: 71 KLRSILMGKSRVELAELPALIKLHFPK 97
L+ + GK + + + H K
Sbjct: 260 LLKQLFDGKEEINSFHISKYLSPHLQK 286
>gi|189190902|ref|XP_001931790.1| SWI-SNF complex subunit (BAF60b) [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973396|gb|EDU40895.1| SWI-SNF complex subunit (BAF60b) [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 491
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
++ L L E + R G M +W Y ++ +LQ ++ CD +L+++ G+
Sbjct: 257 EVFRLSKPLAELLDTDEEDRAGILMGIWEYARSQHLQQEEDERKFACDARLKALFGGQDH 316
Query: 82 VELAELPALIKLHFPKDP 99
LP LIK H P
Sbjct: 317 FFFPNLPQLIKQHLTTLP 334
>gi|323451768|gb|EGB07644.1| hypothetical protein AURANDRAFT_64768 [Aureococcus anophagefferens]
Length = 343
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + VG R + +W YIK ++LQ+P NKN + CD L+++ K +V
Sbjct: 157 LSDEMAAVVGVGRANHFRLVKLLWKYIKKHDLQNPANKNEIVCDDALKAVFK-KDKVTSF 215
Query: 86 ELPALIKLHFPKD 98
+ L+ H+ KD
Sbjct: 216 GMSKLLSAHYFKD 228
>gi|350418264|ref|XP_003491804.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Bombus
impatiens]
Length = 499
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I SR++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACSRMKFAEIPQRLNPLLHPPDP 354
>gi|47220711|emb|CAG11780.1| unnamed protein product [Tetraodon nigroviridis]
Length = 529
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L+ I + R++ +E+P L L P DP
Sbjct: 333 LWQYVKTHKLQDPHEREFINCDKYLQQIFETQ-RMKFSEIPQRLHALLMPPDP 384
>gi|121703351|ref|XP_001269940.1| SWIB/MDM2 domain protein [Aspergillus clavatus NRRL 1]
gi|119398083|gb|EAW08514.1| SWIB/MDM2 domain protein [Aspergillus clavatus NRRL 1]
Length = 287
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR R+W YI+ ++LQDPN++ + CD +R++
Sbjct: 223 GEVTLSRPQTVKRLWQYIREHDLQDPNDRRQIRCDDAMRAVF 264
>gi|340726624|ref|XP_003401655.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Bombus
terrestris]
Length = 499
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I SR++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACSRMKFAEIPQRLNPLLHPPDP 354
>gi|380020614|ref|XP_003694177.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Apis
florea]
Length = 499
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I SR++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACSRMKFAEIPQRLNPLLHPPDP 354
>gi|328788694|ref|XP_003251168.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Apis
mellifera]
Length = 458
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I SR++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACSRMKFAEIPQRLNPLLHPPDP 354
>gi|414873009|tpg|DAA51566.1| TPA: hypothetical protein ZEAMMB73_058775 [Zea mays]
Length = 61
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 39 ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+SR ++W YIK NNLQDP+++ + CD+KL+ L G + L+ HF K
Sbjct: 2 LSRSDVVKKMWDYIKGNNLQDPSDRRKIICDEKLKD-LFGVETFTGFTVSKLLAPHFTK 59
>gi|348503490|ref|XP_003439297.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Oreochromis
niloticus]
Length = 487
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W Y+KTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 273 LARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 331
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 332 RLTNLLLPPDP 342
>gi|448520198|ref|XP_003868247.1| Tri1 protein [Candida orthopsilosis Co 90-125]
gi|380352586|emb|CCG22813.1| Tri1 protein [Candida orthopsilosis]
Length = 265
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
L L+ + + R SR +W+YIK NNLQ+P +K + CD KL+ + K+
Sbjct: 129 LSHELQNVIARERCSRPQVVKHLWAYIKGNNLQNPADKRQIICDDKLQKLFKKKT 183
>gi|383861944|ref|XP_003706444.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Megachile rotundata]
Length = 499
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I SR++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACSRMKFAEIPQRLNPLLHPPDP 354
>gi|317420068|emb|CBN82104.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Dicentrarchus labrax]
Length = 485
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W Y+KTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 271 LARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 329
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 330 RLTNLLLPPDP 340
>gi|220921314|ref|YP_002496615.1| SWIB/MDM2 domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219945920|gb|ACL56312.1| SWIB/MDM2 domain protein [Methylobacterium nodulans ORS 2060]
Length = 110
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG I R +VW YI+ N+LQ+P NK + D KL+ + GK + + E+
Sbjct: 45 LGAIVGTKPIPRGEVVSKVWEYIRKNSLQNPENKREILADDKLKKVF-GKDKATMFEMNK 103
Query: 90 LIKLHF 95
+ H
Sbjct: 104 YLAQHL 109
>gi|343183576|gb|AEM01128.1| DNA topoisomerase I [Criblamydia sequanensis]
Length = 872
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
N+ L V + +S +VW YIK +LQD N+K +N D+ L +L + +
Sbjct: 796 NVSKELEAIVKEKELSFGDATKKVWEYIKDKDLQDKNDKRSINPDKTLSKVLGSSDSINM 855
Query: 85 AELPALIKLHFPK 97
+L A +K H K
Sbjct: 856 LKLGAHLKKHLTK 868
>gi|432929131|ref|XP_004081196.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3-like
[Oryzias latipes]
Length = 462
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W Y+KTN LQD ++K +NCD+ + I R++ +E+P
Sbjct: 248 LARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIF-DCPRLKFSEIPQ 306
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 307 RLTNLLLPPDP 317
>gi|47219716|emb|CAG12638.1| unnamed protein product [Tetraodon nigroviridis]
Length = 488
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I G SR+ AE+P
Sbjct: 239 LARLLGVHTQTRASIMQALWLYIKNNKLQDCHEKEYINCNRYFRQIF-GCSRMRFAEIP 296
>gi|116792867|gb|ABK26533.1| unknown [Picea sitchensis]
Length = 299
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 6 VKKTVIDNPKKLANLID------------LVNLPSTLREFVGQSRISRLGCFMRVWSYIK 53
VK+ I+ P K + L++ + + L+ VG+ + R ++W+YI+
Sbjct: 95 VKEQNIEEPIKESTLLEGRKRGRPGGLNKICGVSPELQAIVGEPALPRTQIVKQLWTYIR 154
Query: 54 TNNLQDPNNKNVVNCDQKLRSIL 76
NNLQDP+NK + C+ LR +
Sbjct: 155 ANNLQDPSNKRNIICNDALRMVF 177
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 24 VNLPSTLREFVGQSRI--SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
V + +L F+G +I S R+ YIK N LQDP +K + CD KL+ + ++
Sbjct: 224 VPISDSLALFLGTDKIETSHEEVVKRLSDYIKENELQDPLDKGKIICDAKLQKLFSCENF 283
Query: 82 VELAELPALIKLHFPK 97
V+ E+ L+ HF K
Sbjct: 284 VDF-EMTKLLAPHFLK 298
>gi|414880478|tpg|DAA57609.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea mays]
Length = 1254
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFP 96
YIK NNL+DP K+ + CD L+S L GK RV E+ L++ HFP
Sbjct: 232 YIKRNNLRDPRRKSQIICDSLLQS-LFGKDRVGHFEMLKLLESHFP 276
>gi|414870773|tpg|DAA49330.1| TPA: hypothetical protein ZEAMMB73_676623 [Zea mays]
Length = 387
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 28 STLREFVGQSR------ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
S L EF+G R IS+ + + YIK NNL DP K+ + CD +L S L K R
Sbjct: 147 SELLEFIGHMRNGDSSYISQFDVQVLLLEYIKQNNLSDPRRKSQIICDARL-SNLFRKPR 205
Query: 82 VELAELPALIKLHF 95
V E+ L+++H+
Sbjct: 206 VGHFEMLKLLEMHY 219
>gi|325095860|gb|EGC49170.1| SWIB/MDM2 domain-containing protein [Ajellomyces capsulatus H88]
Length = 281
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW YI+ NNLQDP ++ + CD +R++
Sbjct: 217 GEVTLSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVF 258
>gi|442771047|gb|AGC71745.1| DNA topoisomerase III [uncultured bacterium A1Q1_fos_504]
Length = 57
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
++W YIK N LQD NK ++N D KL+ L K++V + E+ L+ H
Sbjct: 9 KIWDYIKKNKLQDAMNKRMINADAKLKE-LFQKAQVSMFEMTKLVSNHL 56
>gi|341876673|gb|EGT32608.1| hypothetical protein CAEBREN_04452 [Caenorhabditis brenneri]
Length = 868
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 12 DNPKKLANLIDLVNLPSTLR------EFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K L+ L N P+ + + +G + +R +W YI+T+ LQDP +++
Sbjct: 206 DRPVKCKILLLLDNHPAKFKLHPRLGKVLGIAAETRPKIIEALWQYIRTHGLQDPQERDM 265
Query: 66 VNCDQKLRSILMGKSRVELAELPALIKLH 94
+NCD L S G +R+ E+P KLH
Sbjct: 266 INCDTFL-SQCFGVTRMRFMEVPN--KLH 291
>gi|443691868|gb|ELT93618.1| hypothetical protein CAPTEDRAFT_227075 [Capitella teleta]
Length = 190
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 13 NPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
+PK+ + L L + +G R++R R+W ++ LQDP + + CD++L
Sbjct: 105 SPKRRNGYMKECILSPALADVMGTDRMARSDVVKRMWEIVRERELQDPKQRQYMRCDEQL 164
Query: 73 RSILMGKSRVELAELPALIKLHFPK 97
+ + G+ RV + + H K
Sbjct: 165 QKVF-GRKRVRTFGMMKYLTSHITK 188
>gi|410076390|ref|XP_003955777.1| hypothetical protein KAFR_0B03450 [Kazachstania africana CBS 2517]
gi|372462360|emb|CCF56642.1| hypothetical protein KAFR_0B03450 [Kazachstania africana CBS 2517]
Length = 230
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L L+E +G+ + R VW YIK+NNLQ+ ++ + CD K+R I K
Sbjct: 129 LSPQLKELLGEDELPRTQVVKLVWDYIKSNNLQNEADRREILCDDKMRPIFGNK 182
>gi|391335112|ref|XP_003741941.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Metaseiulus occidentalis]
Length = 503
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y++T+NLQD + + +NCD+ L I +R++ AE+P L +L P DP
Sbjct: 308 LWQYVRTHNLQDSHEREFINCDKYLEQIFQ-TTRMKFAEIPQRLHQLLHPPDP 359
>gi|413957175|gb|AFW89824.1| hypothetical protein ZEAMMB73_838328 [Zea mays]
Length = 2233
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 30 LREFVG------QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
L EFVG QS IS+ + YIK NNL+DP K+ + CD +L L K+RV
Sbjct: 356 LLEFVGHMRDGDQSFISQFDVQTLLLDYIKKNNLRDPQRKSQIICDLRLHR-LFRKARVA 414
Query: 84 LAELPALIKLHF 95
E+ L+++HF
Sbjct: 415 HFEMLKLLEMHF 426
>gi|389613335|dbj|BAM20025.1| similar to CG1240, partial [Papilio xuthus]
Length = 190
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G+ + R RVW+ +K L DPNNK CD + + G R +
Sbjct: 119 LSPALAELMGEDEMPRHEVVKRVWAIVKERKLYDPNNKQFAICDDAMYKVF-GTKRFRIF 177
Query: 86 ELPALIKLHF 95
+ +K HF
Sbjct: 178 GMMKHLKTHF 187
>gi|449541820|gb|EMD32802.1| hypothetical protein CERSUDRAFT_143379 [Ceriporiopsis subvermispora
B]
Length = 411
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR G +W+YIK +NLQD ++ VV D LR + + + +LP
Sbjct: 197 LGSVLGLKEDSRTGVVQALWNYIKIHNLQDKVDRRVVRADAHLRPLFGPQETILFQQLPE 256
Query: 90 LIKLHF-PKDP 99
L + P DP
Sbjct: 257 LANRYLIPPDP 267
>gi|328849291|gb|EGF98474.1| hypothetical protein MELLADRAFT_95643 [Melampsora larici-populina
98AG31]
Length = 168
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
+ ++ + L + +G S ++W+YIK NNLQDP +K V+CD KL++ ++
Sbjct: 93 EYLDCSTALGDVIGVSTCLCPQVVEKIWAYIKANNLQDPKDKEKVSCDGKLKTSFNNQTH 152
Query: 82 V 82
+
Sbjct: 153 M 153
>gi|383851816|ref|XP_003701427.1| PREDICTED: upstream activation factor subunit spp27-like [Megachile
rotundata]
Length = 262
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG +++R +VWS IK NL DP NK CD +L ++ G R
Sbjct: 190 ITLSPELAAVVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDDELMKVI-GVKRFR 248
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 249 TFGMMKYLKNHF 260
>gi|359476848|ref|XP_002267100.2| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Vitis vinifera]
Length = 1643
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK NNL+DP K+ + CD +LR+ L GK+RV E+ L++ HF
Sbjct: 370 YIKRNNLRDPRRKSQIICDMRLRN-LFGKARVGHFEMLKLLESHF 413
>gi|145510698|ref|XP_001441282.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408521|emb|CAK73885.1| unnamed protein product [Paramecium tetraurelia]
Length = 411
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L TL++ +G +R W Y+K NNL D NK+ + D++L+ L G+ R+ ++
Sbjct: 188 LHKTLQQLLGIKEGTRSQILYCFWEYVKLNNLTDKENKDQIIADEQLKQ-LFGQERIPIS 246
Query: 86 ELPALIKLHFPKDPK 100
L L+K+ F ++P+
Sbjct: 247 NLNMLLKM-FIENPE 260
>gi|302420957|ref|XP_003008309.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261353960|gb|EEY16388.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 268
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL L E + + ++SR ++W +IK NNLQDP NK + CD + ++ +V++
Sbjct: 192 NLSYPLAELLKEPQLSRPQVVKKLWEHIKGNNLQDPANKRQIICDAPMEAVFK-LPKVDM 250
Query: 85 AELPALIKLHF 95
++ LI H
Sbjct: 251 FQMNKLIGSHL 261
>gi|156841806|ref|XP_001644274.1| hypothetical protein Kpol_1030p26 [Vanderwaltozyma polyspora DSM
70294]
gi|156114913|gb|EDO16416.1| hypothetical protein Kpol_1030p26 [Vanderwaltozyma polyspora DSM
70294]
Length = 152
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
+V L L++F+ ++R RVW YIK NNLQ+PN++ + CD + I K
Sbjct: 43 IVLLSDELQDFLKVESVTRTQAVKRVWEYIKLNNLQNPNDRREILCDSLMEPIFGKK 99
>gi|182678258|ref|YP_001832404.1| SWIB/MDM2 domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634141|gb|ACB94915.1| SWIB/MDM2 domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 114
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L E VG++ + R +VW YIK + LQ+ NK + D KL+ I GK + + E+
Sbjct: 49 LAEIVGEAPLPRTEVVSKVWEYIKKHKLQNEANKREILADDKLKPIF-GKDKATMFEMNK 107
Query: 90 LIKLHF 95
+ H
Sbjct: 108 FLAQHL 113
>gi|403217664|emb|CCK72157.1| hypothetical protein KNAG_0J00740 [Kazachstania naganishii CBS
8797]
Length = 194
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLR 73
PK LA +LV L L +F+G +R+ R VW YIK + LQ+P ++ + CD+ ++
Sbjct: 106 PKGLAAR-ELV-LSEKLAQFLGAARLPRTEVVRGVWDYIKAHELQNPADRREIFCDEAMQ 163
Query: 74 SIL 76
+
Sbjct: 164 PVF 166
>gi|317025428|ref|XP_001389048.2| SWIB/MDM2 domain protein [Aspergillus niger CBS 513.88]
gi|350638168|gb|EHA26524.1| hypothetical protein ASPNIDRAFT_205951 [Aspergillus niger ATCC
1015]
Length = 285
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR R+W YI ++LQDPN++ + CD +R++
Sbjct: 221 GEVTLSRPQTVKRLWQYIHEHDLQDPNDRRQIRCDDAMRAVF 262
>gi|297734408|emb|CBI15655.3| unnamed protein product [Vitis vinifera]
Length = 399
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L E +G +R +W Y+K+ LQ+PN+ + CD LR + G+ +++ A
Sbjct: 188 LSTALSEVLGLEVDTRPRIVAAIWHYVKSRKLQNPNDPSFFVCDPPLRKVF-GEEKIKFA 246
Query: 86 ELPALIKLH 94
+P I H
Sbjct: 247 MVPQKISHH 255
>gi|350630749|gb|EHA19121.1| hypothetical protein ASPNIDRAFT_54201 [Aspergillus niger ATCC 1015]
Length = 917
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LRSI G+ ++
Sbjct: 695 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIF-GRDQMFFP 753
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 754 QIPESIGPHTSPIDP 768
>gi|134055154|emb|CAK37099.1| unnamed protein product [Aspergillus niger]
Length = 282
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR R+W YI ++LQDPN++ + CD +R++
Sbjct: 218 GEVTLSRPQTVKRLWQYIHEHDLQDPNDRRQIRCDDAMRAVF 259
>gi|241948081|ref|XP_002416763.1| RNA polymerase I transcription factor subunit, putative [Candida
dubliniensis CD36]
gi|223640101|emb|CAX44347.1| RNA polymerase I transcription factor subunit, putative [Candida
dubliniensis CD36]
Length = 254
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
L L +G + SR +W+YIK +NLQ+P +K + CD+KL+ + KS
Sbjct: 139 LSPELANVIGVDKCSRPQVVKLLWAYIKDHNLQNPQDKRQIECDEKLQKLFKKKS 193
>gi|145550090|ref|XP_001460724.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428554|emb|CAK93327.1| unnamed protein product [Paramecium tetraurelia]
Length = 421
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 8/78 (10%)
Query: 26 LPSTLREFVGQSRISR---LGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L TL++ +G +R L CF W Y+K NNL D +K+ + D++L+ L G+ R+
Sbjct: 198 LHKTLQQLLGIKEGTRSQILYCF---WEYVKLNNLTDKESKDYIIADEQLKQ-LFGQERI 253
Query: 83 ELAELPALIKLHFPKDPK 100
L+ L L+K+ F ++P+
Sbjct: 254 PLSNLNMLLKM-FIENPE 270
>gi|242042523|ref|XP_002468656.1| hypothetical protein SORBIDRAFT_01g049770 [Sorghum bicolor]
gi|241922510|gb|EER95654.1| hypothetical protein SORBIDRAFT_01g049770 [Sorghum bicolor]
Length = 518
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFP 96
YIK NNL+DP K+ + CD +L L K+RV E+ L+++HFP
Sbjct: 262 YIKKNNLRDPQRKSQIICDSRLHR-LFRKARVAHFEMLKLLEMHFP 306
>gi|393769784|ref|ZP_10358303.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. GXF4]
gi|392724788|gb|EIZ82134.1| SWIB/MDM2 domain-containing protein [Methylobacterium sp. GXF4]
Length = 123
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L VG + + R +VW YIK +NLQ+P NK + D KL+ + GK + + E+
Sbjct: 55 ADLGAIVGTNPLPRGEVVSKVWDYIKKHNLQNPENKREILADDKLKKVF-GKDKCSMFEM 113
Query: 88 PALIKLHF 95
+ H
Sbjct: 114 NKHLAAHL 121
>gi|358373386|dbj|GAA89984.1| SWI-SNF complex subunit (BAF60b) [Aspergillus kawachii IFO 4308]
Length = 973
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LRSI G+ ++
Sbjct: 751 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIF-GRDQMFFP 809
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 810 QIPESIGPHTSPIDP 824
>gi|328858897|gb|EGG08008.1| hypothetical protein MELLADRAFT_77485 [Melampsora larici-populina
98AG31]
Length = 304
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+N L + +G SR ++W +IK N+LQDP +K + CD+K++++
Sbjct: 200 MNCSPALGDLIGVLTCSRPQVVKKIWEHIKANDLQDPKDKRQIICDEKMKAVF 252
>gi|395325141|gb|EJF57568.1| SWIB-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 255
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++SR ++W+YIK NN+Q+P NK + CD + R+I
Sbjct: 191 KLSRPQTVKQLWTYIKANNMQNPENKKEIICDDRFRAIF 229
>gi|443713587|gb|ELU06365.1| hypothetical protein CAPTEDRAFT_158720 [Capitella teleta]
Length = 514
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L+ I R+ +E+P L L P DP
Sbjct: 314 LWQYIKTHQLQDSSEREYINCDKYLQQIFEA-PRIRFSEIPQRLHPLLMPPDP 365
>gi|256074779|ref|XP_002573700.1| brg-1 associated factor [Schistosoma mansoni]
Length = 228
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 27 PSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAE 86
P+ LR F + R G V +YIK LQDPN K+ +NCD L + G R+ A+
Sbjct: 17 PTNLRRF-----LVRKGTDHEVQTYIKL--LQDPNEKDFINCDSYLEQVF-GCPRMRFAD 68
Query: 87 LPA-LIKLHFPKDP 99
+P+ L L P DP
Sbjct: 69 IPSRLAPLQQPPDP 82
>gi|83766796|dbj|BAE56936.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 486
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LRSI G+ ++
Sbjct: 265 LSKDLAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIF-GRDQMFFP 323
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 324 QIPESIGHHTSPLDP 338
>gi|401626231|gb|EJS44187.1| YMR233W [Saccharomyces arboricola H-6]
Length = 226
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D+P + + V L + L+ F+G + R +W YIK ++LQ+P+++ + CD+K
Sbjct: 112 DSPDSNSISVRKVLLSAPLQAFLGAEELPRTQVVKMIWQYIKEHDLQNPSDRREILCDEK 171
Query: 72 LRSILMGK 79
+ I K
Sbjct: 172 MEPIFGKK 179
>gi|391863971|gb|EIT73270.1| SWI/SNF transcription activation complex subunit [Aspergillus
oryzae 3.042]
Length = 486
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LRSI G+ ++
Sbjct: 265 LSKDLAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIF-GRDQMFFP 323
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 324 QIPESIGHHTSPLDP 338
>gi|159163143|pdb|1UHR|A Chain A, Solution Structure Of The Swib Domain Of Mouse Brg1-
Associated Factor 60a
Length = 93
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 36 LWQYIKTHKLQDPHEREFVLCDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 87
>gi|383640982|ref|ZP_09953388.1| SWIB/MDM2 domain-containing protein [Sphingomonas elodea ATCC
31461]
Length = 85
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMG 78
L + VG + + R +VW YIK NNLQ+P NK + D L+ I G
Sbjct: 20 LAKIVGTADLPRSEIVSKVWEYIKKNNLQNPANKREILADDTLKPIFGG 68
>gi|242058661|ref|XP_002458476.1| hypothetical protein SORBIDRAFT_03g034370 [Sorghum bicolor]
gi|241930451|gb|EES03596.1| hypothetical protein SORBIDRAFT_03g034370 [Sorghum bicolor]
Length = 1681
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFP 96
YIK NNL+DP K+ + CD L+S L K RV E+ L++ HFP
Sbjct: 636 YIKRNNLRDPRRKSQIICDSLLQS-LFAKERVGHFEMLKLLESHFP 680
>gi|297735049|emb|CBI17411.3| unnamed protein product [Vitis vinifera]
Length = 1362
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK NNL+DP K+ + CD +LR+ L GK+RV E+ L++ HF
Sbjct: 370 YIKRNNLRDPRRKSQIICDMRLRN-LFGKARVGHFEMLKLLESHF 413
>gi|443720632|gb|ELU10299.1| hypothetical protein CAPTEDRAFT_149275 [Capitella teleta]
Length = 233
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L+ I R+ +E+P L L P DP
Sbjct: 33 LWQYIKTHQLQDSSEREYINCDKYLQQIFEA-PRIRFSEIPQRLHPLLMPPDP 84
>gi|358057968|dbj|GAA96213.1| hypothetical protein E5Q_02877 [Mixia osmundae IAM 14324]
Length = 276
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLR 73
PKK +N P+ L G +R +R +W+Y++ +NL+DPNN + D L+
Sbjct: 193 PKKPSNAKTFECSPA-LAAVCGVTRTNRFAVNKHIWAYVREHNLKDPNNGRNIILDDALK 251
Query: 74 SILMGKSRVELAELPALIKLHF 95
++ + + + +P H
Sbjct: 252 AVFGDRKTISMFAMPKHYAKHL 273
>gi|349580524|dbj|GAA25684.1| K7_Ymr233wp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 223
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D+P + + V L + L++F+G + R +W YIK ++LQ+P ++ + CD+K
Sbjct: 112 DSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEK 171
Query: 72 LRSILMGK 79
+ I K
Sbjct: 172 MEPIFGKK 179
>gi|157167397|ref|XP_001653905.1| brg-1 associated factor [Aedes aegypti]
gi|108874229|gb|EAT38454.1| AAEL009649-PA [Aedes aegypti]
Length = 512
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + + CD+ L I G R++ AE+P L L P DP
Sbjct: 315 LWQYIKTHKLQDAHEREYITCDKYLEQIF-GCQRMKFAEIPQRLNPLLHPPDP 366
>gi|91090326|ref|XP_966482.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270013422|gb|EFA09870.1| hypothetical protein TcasGA2_TC012018 [Tribolium castaneum]
Length = 257
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VGQ ++R RVW+ IK +L DP NK CD L ++ G R
Sbjct: 185 MTLSPELAALVGQDSMARHEVVKRVWAIIKERDLYDPKNKQYAICDDALFKVI-GVKRFR 243
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 244 TFGMMKFLKNHF 255
>gi|332018104|gb|EGI58718.1| Upstream activation factor subunit spp27 [Acromyrmex echinatior]
Length = 334
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG +++R +VWS IK NL DP NK CD++L ++ G R
Sbjct: 262 ITLSPELAAVVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVI-GVKRFR 320
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 321 TFGMMKYLKNHF 332
>gi|242782065|ref|XP_002479928.1| SWI-SNF complex subunit (BAF60b), putative [Talaromyces stipitatus
ATCC 10500]
gi|218720075|gb|EED19494.1| SWI-SNF complex subunit (BAF60b), putative [Talaromyces stipitatus
ATCC 10500]
Length = 514
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L+E + ++ G + +W YI+T LQ+ K ++CD +LR I G+ V ++P
Sbjct: 295 LQEIIDVEEDTKSGILLGIWDYIRTMKLQEDQEKRQIHCDARLRMIF-GRDAVFFPQIPD 353
Query: 90 LIKLHF-PKDP 99
I H P DP
Sbjct: 354 AIAAHTAPLDP 364
>gi|195048848|ref|XP_001992604.1| GH24118 [Drosophila grimshawi]
gi|193893445|gb|EDV92311.1| GH24118 [Drosophila grimshawi]
Length = 515
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 320 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 371
>gi|62185557|ref|YP_220342.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
abortus S26/3]
gi|62148624|emb|CAH64396.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila abortus
S26/3]
Length = 872
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D K +I+ G V++ +LP L+
Sbjct: 798 IGPEPLGRGEATKKVWQYIKDHNLQSPENKKMLLPDDKFAAII-GPEPVDMFQLPKLLNQ 856
Query: 94 HFPK 97
H K
Sbjct: 857 HLFK 860
>gi|444318920|ref|XP_004180117.1| hypothetical protein TBLA_0D00900 [Tetrapisispora blattae CBS 6284]
gi|387513159|emb|CCH60598.1| hypothetical protein TBLA_0D00900 [Tetrapisispora blattae CBS 6284]
Length = 274
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 7 KKTVIDNPK-KLANLID--LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNK 63
KK + PK K+AN + V L L +G++ + RL +W YIK NNLQDP NK
Sbjct: 97 KKVSKETPKAKVANNLSTKYVVLSKELSHLLGENELPRLEITKELWKYIKNNNLQDPANK 156
Query: 64 NVVNCDQKLRSIL 76
+ D+ L+ I
Sbjct: 157 QRIISDKMLKPIF 169
>gi|323336060|gb|EGA77334.1| Tri1p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
L + L++F+G + R +W YIK ++LQ+P ++ + CD+K+ I K+
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFWQKN 180
>gi|401408035|ref|XP_003883466.1| putative SWIB/MDM2 domain-containing protein [Neospora caninum
Liverpool]
gi|325117883|emb|CBZ53434.1| putative SWIB/MDM2 domain-containing protein [Neospora caninum
Liverpool]
Length = 1071
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 31 REFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL-AELPA 89
RE G+ R+SR +W Y K NL+ + V CD++L+ + G+ +V+L EL +
Sbjct: 170 REVGGELRMSRPQVTQCIWKYAKAQNLRRGGDGKTVFCDERLKRLFAGREQVDLFRELQS 229
Query: 90 LIKLHF 95
L+ H
Sbjct: 230 LLVPHL 235
>gi|225558134|gb|EEH06419.1| SWIB/MDM2 domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 263
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G +SR +VW YI+ NNLQDP ++ + CD +R++
Sbjct: 198 TGGFHLSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVF 240
>gi|424825601|ref|ZP_18250588.1| fused DNA topoisomerase I/SWI domain protein [Chlamydophila abortus
LLG]
gi|333410700|gb|EGK69687.1| fused DNA topoisomerase I/SWI domain protein [Chlamydophila abortus
LLG]
Length = 872
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G + R +VW YIK +NLQ P NK ++ D K +I+ G V++ +LP L+
Sbjct: 798 IGPEPLGRGEATKKVWQYIKDHNLQSPENKKMLLPDDKFAAII-GPEPVDMFQLPKLLNQ 856
Query: 94 HFPK 97
H K
Sbjct: 857 HLFK 860
>gi|317142482|ref|XP_001818938.2| SWI-SNF complex subunit (BAF60b) [Aspergillus oryzae RIB40]
Length = 507
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LRSI G+ ++
Sbjct: 286 LSKDLAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIF-GRDQMFFP 344
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 345 QIPESIGHHTSPLDP 359
>gi|297741335|emb|CBI32466.3| unnamed protein product [Vitis vinifera]
Length = 122
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 8 KTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDP-NNKNVV 66
K VID KK L +L L++ VG + ++ + W+YI+ N+LQDP NN+N++
Sbjct: 17 KVVID-VKKRGGYNKLCSLSPQLQKIVGAAELTGPQVVKKFWTYIQENSLQDPKNNRNII 75
Query: 67 NCDQKLRSILMGKSRVELAELPALIKLH 94
CD+ L+ + S + + E+ ++ H
Sbjct: 76 -CDESLQELFHVDS-INMFEMNKVLSKH 101
>gi|449542129|gb|EMD33109.1| hypothetical protein CERSUDRAFT_142690 [Ceriporiopsis subvermispora
B]
Length = 281
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
++SR ++W YIK NLQ+P NK + CD LR+I G R+++ ++ ++ H
Sbjct: 210 KLSRPQVVKQLWVYIKDRNLQNPANKKEIMCDDSLRAIF-GTDRIDMFKMNKVLGGHL 266
>gi|317142484|ref|XP_003189412.1| SWI-SNF complex subunit (BAF60b) [Aspergillus oryzae RIB40]
Length = 504
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LRSI G+ ++
Sbjct: 283 LSKDLAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIF-GRDQMFFP 341
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 342 QIPESIGHHTSPLDP 356
>gi|336273172|ref|XP_003351341.1| hypothetical protein SMAC_03646 [Sordaria macrospora k-hell]
Length = 262
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
NL L+E G++++ + ++W +IK N LQDP++K + CD KL+++ S
Sbjct: 191 NLSYPLQEVCGEAQVVK-----KLWEHIKANELQDPSDKRQILCDDKLQAVFKQSS 241
>gi|323307663|gb|EGA60928.1| Tri1p [Saccharomyces cerevisiae FostersO]
Length = 226
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D+P + + V L + L++F+G + R +W YIK ++LQ+P ++ + CD+K
Sbjct: 112 DSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEK 171
Query: 72 LRSILMGK 79
+ I K
Sbjct: 172 MEPIFGKK 179
>gi|145255425|ref|XP_001398960.1| SWI-SNF complex subunit (BAF60b) [Aspergillus niger CBS 513.88]
gi|134084551|emb|CAK43304.1| unnamed protein product [Aspergillus niger]
Length = 511
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LRSI G+ ++
Sbjct: 289 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIF-GRDQMFFP 347
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 348 QIPESIGPHTSPIDP 362
>gi|46204853|ref|ZP_00049390.2| COG5531: SWIB-domain-containing proteins implicated in chromatin
remodeling [Magnetospirillum magnetotacticum MS-1]
Length = 106
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + R +VW +IK +NLQ+P NK + D KL+ I GK + + E+
Sbjct: 40 LAAIVGDKPLPRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKIF-GKDKCSMFEMNK 98
Query: 90 LIKLHF 95
+ H
Sbjct: 99 HLAAHL 104
>gi|395327855|gb|EJF60251.1| SWI/SNF complex 60 kDa subunit [Dichomitus squalens LYAD-421 SS1]
Length = 434
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 10/98 (10%)
Query: 12 DNPKKLANLIDLVNLPST------LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K+ ++ L P L +G SR+G +W+YIK NNLQD ++
Sbjct: 199 DAPVKIRIVLHLEQQPEQYKVQPELANIIGVKEESRIGVVQALWNYIKQNNLQDKQDRRK 258
Query: 66 VNCDQKLRSILMGKSRVE---LAELPALIKLHF-PKDP 99
++ D +LR I + E + LP ++ + P +P
Sbjct: 259 IHADARLRPIFNTHNNQEYEYFSALPEIVNRYLAPPEP 296
>gi|323303447|gb|EGA57242.1| Tri1p [Saccharomyces cerevisiae FostersB]
Length = 226
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D+P + + V L + L++F+G + R +W YIK ++LQ+P ++ + CD+K
Sbjct: 112 DSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEK 171
Query: 72 LRSILMGK 79
+ I K
Sbjct: 172 MEPIFGKK 179
>gi|170069919|ref|XP_001869398.1| brg-1 associated factor [Culex quinquefasciatus]
gi|167865770|gb|EDS29153.1| brg-1 associated factor [Culex quinquefasciatus]
Length = 484
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + + CD+ L I G R++ AE+P L L P DP
Sbjct: 287 LWQYIKTHKLQDSHEREYITCDKYLEQIF-GCQRMKFAEIPQRLNPLLHPPDP 338
>gi|323353173|gb|EGA85473.1| Tri1p [Saccharomyces cerevisiae VL3]
Length = 217
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D+P + + V L + L++F+G + R +W YIK ++LQ+P ++ + CD+K
Sbjct: 103 DSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEK 162
Query: 72 LRSILMGK 79
+ I K
Sbjct: 163 MEPIFGKK 170
>gi|6323889|ref|NP_013960.1| Tri1p [Saccharomyces cerevisiae S288c]
gi|2497196|sp|Q05024.1|TRI1_YEAST RecName: Full=Protein TRI1
gi|887614|emb|CAA90204.1| unknown [Saccharomyces cerevisiae]
gi|45269842|gb|AAS56301.1| YMR233W [Saccharomyces cerevisiae]
gi|151945938|gb|EDN64170.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190408460|gb|EDV11725.1| hypothetical protein SCRG_02128 [Saccharomyces cerevisiae RM11-1a]
gi|207342139|gb|EDZ69997.1| YMR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256271577|gb|EEU06619.1| Tri1p [Saccharomyces cerevisiae JAY291]
gi|259148819|emb|CAY82064.1| Tri1p [Saccharomyces cerevisiae EC1118]
gi|285814238|tpg|DAA10133.1| TPA: Tri1p [Saccharomyces cerevisiae S288c]
gi|323332147|gb|EGA73558.1| Tri1p [Saccharomyces cerevisiae AWRI796]
gi|323347044|gb|EGA81320.1| Tri1p [Saccharomyces cerevisiae Lalvin QA23]
gi|392297403|gb|EIW08503.1| Tri1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 226
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D+P + + V L + L++F+G + R +W YIK ++LQ+P ++ + CD+K
Sbjct: 112 DSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEK 171
Query: 72 LRSILMGK 79
+ I K
Sbjct: 172 MEPIFGKK 179
>gi|340725447|ref|XP_003401081.1| PREDICTED: upstream activation factor subunit spp27-like [Bombus
terrestris]
Length = 264
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG +++R ++WS IK NL DP NK CD +L I+ G R
Sbjct: 192 ITLSPELSAVVGAEQMARHEVVKKMWSIIKERNLYDPKNKQYAICDDELLKII-GVKRFR 250
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 251 TFGMMKYLKNHF 262
>gi|154280751|ref|XP_001541188.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411367|gb|EDN06755.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 263
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G +SR +VW YI+ NNLQDP ++ + CD +R++
Sbjct: 198 TGGFHLSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVF 240
>gi|348684557|gb|EGZ24372.1| hypothetical protein PHYSODRAFT_483570 [Phytophthora sojae]
Length = 445
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L L +L +G+S ++R W+Y+K + LQDP + +++ +Q+++ + +
Sbjct: 364 LYKLSPSLSHLLGKSELTRPAAIKEFWAYVKEHKLQDPKDGRLIHPNQEMKDVF-SVDEI 422
Query: 83 ELAELPALIKLHFPKDPK 100
++ L+ H K P+
Sbjct: 423 GFTQVMGLLSKHLEKKPE 440
>gi|90083845|dbj|BAE90873.1| unnamed protein product [Macaca fascicularis]
gi|119578525|gb|EAW58121.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_b [Homo
sapiens]
Length = 229
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 33 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 84
>gi|322801005|gb|EFZ21786.1| hypothetical protein SINV_05525 [Solenopsis invicta]
Length = 295
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG +++R ++WS IK NL DP NK CD++L I+ G R
Sbjct: 223 LTLSPELAAVVGAEQMARHEVVRKMWSIIKERNLYDPKNKQFAICDEELMKII-GVKRFR 281
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 282 TFGMMKYLKNHF 293
>gi|365763939|gb|EHN05465.1| Tri1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 226
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L + L++F+G + R +W YIK ++LQ+P ++ + CD+K+ I K
Sbjct: 126 LSAPLQKFLGSEELPRTQVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFGKK 179
>gi|163852543|ref|YP_001640586.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
PA1]
gi|218531380|ref|YP_002422196.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
CM4]
gi|240139877|ref|YP_002964354.1| hypothetical protein MexAM1_META1p3340 [Methylobacterium extorquens
AM1]
gi|254562299|ref|YP_003069394.1| hypothetical protein METDI3911 [Methylobacterium extorquens DM4]
gi|418058520|ref|ZP_12696492.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
gi|163664148|gb|ABY31515.1| SWIB/MDM2 domain protein [Methylobacterium extorquens PA1]
gi|218523683|gb|ACK84268.1| SWIB/MDM2 domain protein [Methylobacterium extorquens CM4]
gi|240009851|gb|ACS41077.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|254269577|emb|CAX25547.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
gi|373567944|gb|EHP93901.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
Length = 110
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + + R +VW +IK +NLQ+P NK + D KL+ I GK + + E+
Sbjct: 44 LAAIVGDNPLPRGEVVSKVWEHIKKHNLQNPENKREILADDKLKKIF-GKDKCSMFEMNK 102
Query: 90 LIKLHF 95
+ H
Sbjct: 103 HLAAHL 108
>gi|217977994|ref|YP_002362141.1| SWIB/MDM2 domain-containing protein [Methylocella silvestris BL2]
gi|217503370|gb|ACK50779.1| SWIB/MDM2 domain protein [Methylocella silvestris BL2]
Length = 108
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L E VG + + R +VW YIK + LQ+ NK + D KL+++ G+ +V + E+
Sbjct: 43 LAEVVGSAPLPRTEVVSKVWEYIKKHKLQNEANKREILADDKLKAVF-GRDKVTMFEMNK 101
Query: 90 LIKLHF 95
+ H
Sbjct: 102 YLAQHL 107
>gi|402216656|gb|EJT96741.1| SWIB-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 303
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
L L+E G++ + R +W +IK N LQ+P N+ + CD K+R++ G ++++
Sbjct: 226 LSPALQELTGETALPRPLVVKALWDHIKANQLQNPQNRKEILCDDKMRAVF-GMQKIDM 283
>gi|188582565|ref|YP_001926010.1| SWIB/MDM2 domain-containing protein [Methylobacterium populi BJ001]
gi|179346063|gb|ACB81475.1| SWIB/MDM2 domain protein [Methylobacterium populi BJ001]
Length = 110
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L VG + R +VW +IK +NLQ+P NK + D KL+ I GK + + E+
Sbjct: 44 LAAIVGDKPLPRGEVVSKVWEHIKKHNLQNPENKREIVADDKLKKIF-GKDKCSMFEMNK 102
Query: 90 LIKLHF 95
+ H
Sbjct: 103 HLAAHL 108
>gi|66525165|ref|XP_392065.2| PREDICTED: upstream activation factor subunit spp27-like [Apis
mellifera]
gi|380016161|ref|XP_003692057.1| PREDICTED: upstream activation factor subunit spp27-like [Apis
florea]
Length = 261
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG +++R ++WS IK NL DP NK CD +L ++ G R
Sbjct: 189 ITLSPELAAVVGAEQMARHEVVKKIWSIIKERNLYDPKNKQYALCDDELLKVI-GVKRFR 247
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 248 TFGMMKYLKNHF 259
>gi|348537316|ref|XP_003456141.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Oreochromis niloticus]
Length = 514
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L+ I + R++ +E+P L L P +P
Sbjct: 318 LWQYVKTHKLQDPHEREFINCDKYLQQIFETQ-RMKFSEIPQRLHALLMPPEP 369
>gi|310800656|gb|EFQ35549.1| DEK C terminal domain-containing protein [Glomerella graminicola
M1.001]
Length = 257
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNK 63
NL L E +G+S++SR ++W +IK N+LQDP+NK
Sbjct: 215 NLSEPLAELLGESQLSRPQVVKKLWEHIKGNDLQDPDNK 253
>gi|119186935|ref|XP_001244074.1| hypothetical protein CIMG_03515 [Coccidioides immitis RS]
gi|392870793|gb|EAS32626.2| SWI-SNF complex subunit [Coccidioides immitis RS]
Length = 515
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
+R G + +W YIKT LQ+ K V C+++LR+I G+ ++ +P LI H
Sbjct: 308 TRAGIIIGLWEYIKTAGLQESEEKQAVACNERLRAIF-GRDKIYFPAIPELIGPH 361
>gi|296487808|tpg|DAA29921.1| TPA: SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Bos taurus]
Length = 515
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|70991062|ref|XP_750380.1| SWI-SNF complex subunit (BAF60b) [Aspergillus fumigatus Af293]
gi|66848012|gb|EAL88342.1| SWI-SNF complex subunit (BAF60b), putative [Aspergillus fumigatus
Af293]
Length = 508
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LR+I G+ ++
Sbjct: 286 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRAIF-GRDQMFFP 344
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 345 QIPESIGPHTSPLDP 359
>gi|67527965|ref|XP_661829.1| hypothetical protein AN4225.2 [Aspergillus nidulans FGSC A4]
gi|40740134|gb|EAA59324.1| hypothetical protein AN4225.2 [Aspergillus nidulans FGSC A4]
Length = 925
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LR+I G+ ++
Sbjct: 703 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDDRLRAIF-GRDQMFFP 761
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 762 QIPESIGPHTSPLDP 776
>gi|431901344|gb|ELK08370.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Pteropus alecto]
Length = 515
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|159130854|gb|EDP55967.1| SWI-SNF complex subunit (BAF60b), putative [Aspergillus fumigatus
A1163]
Length = 508
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LR+I G+ ++
Sbjct: 286 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRAIF-GRDQMFFP 344
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 345 QIPESIGPHTSPLDP 359
>gi|84370151|ref|NP_001033648.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Bos taurus]
gi|122137061|sp|Q2TBN1.1|SMRD1_BOVIN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit A;
AltName: Full=BRG1-associated factor 60A; Short=BAF60A;
AltName: Full=SWI/SNF complex 60 kDa subunit
gi|83638693|gb|AAI09891.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Bos taurus]
Length = 515
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|354491482|ref|XP_003507884.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Cricetulus griseus]
Length = 495
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 299 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 350
>gi|392585449|gb|EIW74788.1| SWI/SNF complex 60 kDa subunit [Coniophora puteana RWD-64-598 SS2]
Length = 416
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 12 DNPKKLANLIDLVNLPSTLR------EFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K L+ L P + +G + SRLG +W+YIK + LQD ++
Sbjct: 181 DVPTKCRVLMYLAQYPEQFKIAPELGNILGITEESRLGVIQTLWNYIKIHGLQDKTDRRR 240
Query: 66 VNCDQKLRSILMGKSRVELAELPALIKLHF-PKDP 99
+ D+ L+ I G+ LP L+ + P DP
Sbjct: 241 IRADEALKPIFGGEG-TTFYHLPELVNRYLMPPDP 274
>gi|332206268|ref|XP_003252213.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily D
member 1 [Nomascus leucogenys]
Length = 515
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|149243917|ref|XP_001526546.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448940|gb|EDK43196.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 141
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L S L+ + + SR R+W+YIK NNLQ+P +K + CD KL+ +
Sbjct: 74 LSSDLQNVISELTCSRPQVVKRLWAYIKDNNLQNPTDKRQIICDDKLQQLF 124
>gi|344235675|gb|EGV91778.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Cricetulus griseus]
Length = 300
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 167 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 225
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 226 RLTALLLPPDP 236
>gi|303317402|ref|XP_003068703.1| SWIB/MDM2 domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240108384|gb|EER26558.1| SWIB/MDM2 domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|320038664|gb|EFW20599.1| SWI-SNF complex subunit [Coccidioides posadasii str. Silveira]
Length = 515
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
+R G + +W YIKT LQ+ K V C+++LR+I G+ ++ +P LI H
Sbjct: 308 TRAGIIIGLWEYIKTAGLQESEEKQAVACNERLRAIF-GRDKIYFPAIPELIGPH 361
>gi|417411114|gb|JAA52007.1| Putative swi/snf transcription activation complex subunit, partial
[Desmodus rotundus]
Length = 486
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 290 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 341
>gi|403296629|ref|XP_003939203.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 3
[Saimiri boliviensis boliviensis]
Length = 412
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 257 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 308
>gi|403296627|ref|XP_003939202.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 412
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 216 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 267
>gi|345563399|gb|EGX46400.1| hypothetical protein AOL_s00109g158 [Arthrobotrys oligospora ATCC
24927]
Length = 511
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L+ + + SR G + +W Y N LQD + + + CD+KL+ R+++
Sbjct: 301 LSPELQSILDTTEDSRAGIMLGIWEYAYLNGLQDRDERRNITCDEKLKKAFK-MDRIQVP 359
Query: 86 ELPALIKLHF-PKDP 99
++P LI H P +P
Sbjct: 360 QIPELISPHLKPIEP 374
>gi|158258837|dbj|BAF85389.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 96 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 147
>gi|133777007|gb|AAH09368.3| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Homo sapiens]
gi|351697596|gb|EHB00515.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Heterocephalus glaber]
Length = 476
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 280 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 331
>gi|348537318|ref|XP_003456142.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Oreochromis niloticus]
Length = 473
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L+ I + R++ +E+P L L P +P
Sbjct: 318 LWQYVKTHKLQDPHEREFINCDKYLQQIFETQ-RMKFSEIPQRLHALLMPPEP 369
>gi|338726079|ref|XP_001915940.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Equus
caballus]
Length = 468
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 272 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 323
>gi|444724224|gb|ELW64835.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Tupaia chinensis]
Length = 506
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 292 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 350
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 351 RLTALLLPPDP 361
>gi|410896250|ref|XP_003961612.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2-like
[Takifugu rubripes]
Length = 503
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I G R+ AE+P
Sbjct: 289 LARLLGVHTQTRASIMQALWLYIKNNKLQDCHEKEYINCNRYFRQIF-GCGRMRFAEIP 346
>gi|355720717|gb|AES07024.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Mustela putorius furo]
Length = 470
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 274 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 325
>gi|119496525|ref|XP_001265036.1| SWI-SNF complex subunit (BAF60b), putative [Neosartorya fischeri
NRRL 181]
gi|119413198|gb|EAW23139.1| SWI-SNF complex subunit (BAF60b), putative [Neosartorya fischeri
NRRL 181]
Length = 510
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LR+I G+ ++
Sbjct: 288 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRAIF-GRDQMFFP 346
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 347 QIPESIGPHTSPLDP 361
>gi|345792106|ref|XP_543674.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Canis lupus
familiaris]
Length = 476
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 280 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 331
>gi|317418744|emb|CBN80782.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Dicentrarchus labrax]
Length = 514
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L+ I + R++ +E+P L L P +P
Sbjct: 318 LWQYVKTHKLQDPHEREFINCDKYLQQIFETQ-RMKFSEIPQRLHALLMPPEP 369
>gi|38198635|ref|NP_938172.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Danio rerio]
gi|29387084|gb|AAH49347.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Danio rerio]
gi|46249729|gb|AAH68407.1| Smarcd1 protein [Danio rerio]
gi|182889574|gb|AAI65365.1| Smarcd1 protein [Danio rerio]
Length = 510
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L+ I + R++ +E+P L L P +P
Sbjct: 314 LWQYVKTHKLQDPHEREFINCDKYLQQIFETQ-RMKFSEIPQRLHALLMPPEP 365
>gi|432114468|gb|ELK36316.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Myotis davidii]
Length = 453
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 257 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 308
>gi|4566530|gb|AAD23390.1|AF109733_1 SWI/SNF-related, matrix-associated, actin-dependent regulator of
chromatin D1 [Homo sapiens]
gi|344237500|gb|EGV93603.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Cricetulus griseus]
Length = 453
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 257 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 308
>gi|281348557|gb|EFB24141.1| hypothetical protein PANDA_011399 [Ailuropoda melanoleuca]
gi|355564219|gb|EHH20719.1| SWI/SNF complex 60 kDa subunit, partial [Macaca mulatta]
gi|355786087|gb|EHH66270.1| SWI/SNF complex 60 kDa subunit, partial [Macaca fascicularis]
Length = 456
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 260 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 311
>gi|403296625|ref|XP_003939201.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 453
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 257 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 308
>gi|395537910|ref|XP_003770931.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Sarcophilus
harrisii]
Length = 517
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 321 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 372
>gi|335305097|ref|XP_003134625.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Sus scrofa]
Length = 483
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|258563588|ref|XP_002582539.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908046|gb|EEP82447.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 482
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
SR G + +W YIKT LQ+ + V C+++LR+I G+ ++ +P LI H
Sbjct: 275 SRAGIIIGLWEYIKTAGLQESEERQAVACNERLRAIF-GRDKIYFPAIPELIGPH 328
>gi|440909091|gb|ELR59038.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1, partial [Bos grunniens
mutus]
Length = 456
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 260 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 311
>gi|30584227|gb|AAP36362.1| Homo sapiens SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3 [synthetic
construct]
gi|60652627|gb|AAX29008.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily d, member 3 [synthetic construct]
gi|60652629|gb|AAX29009.1| SWI/SNF related matrix associated actin dependent regulator of
chromatin subfamily d, member 3 [synthetic construct]
Length = 471
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 256 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 314
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 315 RLTALLLPPDP 325
>gi|332243626|ref|XP_003270979.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 1
[Nomascus leucogenys]
Length = 480
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 266 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 324
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 325 RLTALLLPPDP 335
>gi|426224514|ref|XP_004006415.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Ovis aries]
Length = 453
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 257 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 308
>gi|240142382|ref|YP_002966892.1| hypothetical protein MexAM1_META2p0707 [Methylobacterium
extorquens AM1]
gi|418059176|ref|ZP_12697132.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
gi|240012326|gb|ACS43551.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|373567298|gb|EHP93271.1| SWIB/MDM2 domain-containing protein [Methylobacterium extorquens
DSM 13060]
Length = 100
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ L VG + R +VW +IK NNLQ+P NK + D+KL+ +
Sbjct: 32 AELAAIVGDKPLPRGEVVSKVWEHIKKNNLQNPQNKREIVADEKLKKVF 80
>gi|242021871|ref|XP_002431366.1| brg-1 associated factor, putative [Pediculus humanus corporis]
gi|212516642|gb|EEB18628.1| brg-1 associated factor, putative [Pediculus humanus corporis]
Length = 494
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I R++ AE+P L L P DP
Sbjct: 293 LWQYIKTHKLQDAHEREFINCDKYLEQIFTC-PRMKFAEIPQRLNPLLHPPDP 344
>gi|133777022|gb|AAH26783.3| Smarcd1 protein [Mus musculus]
gi|148672169|gb|EDL04116.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Mus musculus]
Length = 476
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 280 LWQYIKTHKLQDPHEREFVLCDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 331
>gi|403276491|ref|XP_003929931.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 1
[Saimiri boliviensis boliviensis]
Length = 483
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|118151422|ref|NP_001071622.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Bos taurus]
gi|113911977|gb|AAI22807.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Bos taurus]
Length = 483
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|21264353|ref|NP_003069.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 isoform 1 [Homo sapiens]
gi|51477704|ref|NP_001003802.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 isoform 1 [Homo sapiens]
gi|395838365|ref|XP_003792086.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 2
[Otolemur garnettii]
gi|12803587|gb|AAH02628.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Homo sapiens]
gi|40686139|gb|AAR88511.1| 60kDa BRG-1/Brm associated factor subunit c isoform 1 [Homo
sapiens]
gi|51105926|gb|EAL24510.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Homo sapiens]
gi|82571729|gb|AAI10351.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Homo sapiens]
gi|90076464|dbj|BAE87912.1| unnamed protein product [Macaca fascicularis]
gi|119574390|gb|EAW54005.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3, isoform CRA_a [Homo
sapiens]
gi|119574392|gb|EAW54007.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3, isoform CRA_a [Homo
sapiens]
gi|119574393|gb|EAW54008.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3, isoform CRA_a [Homo
sapiens]
gi|208967512|dbj|BAG73770.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [synthetic construct]
gi|380784321|gb|AFE64036.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 isoform 1 [Macaca
mulatta]
gi|384940168|gb|AFI33689.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 isoform 1 [Macaca
mulatta]
gi|410218996|gb|JAA06717.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Pan troglodytes]
gi|410306852|gb|JAA32026.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Pan troglodytes]
gi|410335775|gb|JAA36834.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Pan troglodytes]
Length = 470
Score = 42.4 bits (98), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 256 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 314
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 315 RLTALLLPPDP 325
>gi|312372610|gb|EFR20537.1| hypothetical protein AND_19939 [Anopheles darlingi]
Length = 459
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIK-LHFPKDP 99
+W YIKT+ LQD + + V CD+ L +I G R++ AE+P + L P DP
Sbjct: 262 LWQYIKTHKLQDAHEREYVACDKYLENIF-GCPRMKFAEIPQRLNPLLHPPDP 313
>gi|296488212|tpg|DAA30325.1| TPA: SWI/SNF related, matrix associated, actin dependent regulator
of chromatin, subfamily d, member 3 [Bos taurus]
Length = 457
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|403276493|ref|XP_003929932.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 2
[Saimiri boliviensis boliviensis]
Length = 470
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 256 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 314
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 315 RLTALLLPPDP 325
>gi|296210194|ref|XP_002751899.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 2
[Callithrix jacchus]
gi|296210196|ref|XP_002751900.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 3
[Callithrix jacchus]
Length = 470
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 256 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 314
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 315 RLTALLLPPDP 325
>gi|225456301|ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
Length = 546
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L E +G +R +W Y+K+ LQ+PN+ + CD LR + G+ +++ A
Sbjct: 335 LSTALSEVLGLEVDTRPRIVAAIWHYVKSRKLQNPNDPSFFVCDPPLRKVF-GEEKIKFA 393
Query: 86 ELPALIKLHF-PKDP 99
+P I H P P
Sbjct: 394 MVPQKISHHLSPPQP 408
>gi|77404373|ref|NP_080167.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Mus musculus]
gi|57013054|sp|Q6P9Z1.2|SMRD3_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit C;
AltName: Full=BRG1-associated factor 60C; Short=BAF60C;
Short=mBAF60c
gi|77045671|gb|AAH13122.2| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Mus musculus]
gi|148671157|gb|EDL03104.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3, isoform CRA_b [Mus
musculus]
Length = 483
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|51477702|ref|NP_001003801.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 isoform 2 [Homo sapiens]
gi|386781361|ref|NP_001247613.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Macaca mulatta]
gi|291397384|ref|XP_002715103.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 3-like
[Oryctolagus cuniculus]
gi|296210192|ref|XP_002751898.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 1
[Callithrix jacchus]
gi|332870084|ref|XP_519517.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Pan
troglodytes]
gi|395838363|ref|XP_003792085.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 1
[Otolemur garnettii]
gi|426358516|ref|XP_004046556.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Gorilla
gorilla gorilla]
gi|57013057|sp|Q6STE5.1|SMRD3_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit C;
AltName: Full=BRG1-associated factor 60C; Short=BAF60C
gi|40686120|gb|AAR88510.1| 60kDa BRG-1/Brm associated factor subunit c isoform 2 [Homo
sapiens]
gi|119574391|gb|EAW54006.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3, isoform CRA_b [Homo
sapiens]
gi|384940170|gb|AFI33690.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 isoform 2 [Macaca
mulatta]
gi|387541040|gb|AFJ71147.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 isoform 2 [Macaca
mulatta]
gi|410218994|gb|JAA06716.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Pan troglodytes]
gi|410248564|gb|JAA12249.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Pan troglodytes]
gi|410306850|gb|JAA32025.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Pan troglodytes]
gi|410335773|gb|JAA36833.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Pan troglodytes]
Length = 483
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|395539736|ref|XP_003771822.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Sarcophilus
harrisii]
Length = 488
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 274 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 332
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 333 RLTALLLPPDP 343
>gi|297682035|ref|XP_002818736.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Pongo
abelii]
Length = 483
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|38014750|gb|AAH60525.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Mus musculus]
Length = 483
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|1549249|gb|AAC52794.1| SWI/SNF complex 60 KDa subunit [Mus musculus]
Length = 475
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 280 LWQYIKTHKLQDPHEREFVLCDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 331
>gi|322798220|gb|EFZ20012.1| hypothetical protein SINV_00172 [Solenopsis invicta]
Length = 467
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I R++ AE+P L L P DP
Sbjct: 271 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACPRMKFAEIPQRLNPLLHPPDP 322
>gi|193785378|dbj|BAG54531.1| unnamed protein product [Homo sapiens]
Length = 435
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 221 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 279
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 280 RLTALLLPPDP 290
>gi|148671156|gb|EDL03103.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3, isoform CRA_a [Mus
musculus]
Length = 454
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 240 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 298
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 299 RLTALLLPPDP 309
>gi|133777113|gb|AAH79839.2| Smarcd1 protein [Mus musculus]
Length = 476
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 280 LWQYIKTHKLQDPHEREFVLCDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 331
>gi|109658267|gb|AAI18306.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Bos taurus]
Length = 470
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 256 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 314
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 315 RLTALLLPPDP 325
>gi|281339850|gb|EFB15434.1| hypothetical protein PANDA_003538 [Ailuropoda melanoleuca]
Length = 483
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|432097042|gb|ELK27540.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Myotis davidii]
Length = 381
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 167 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 225
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 226 RLTALLLPPDP 236
>gi|301759379|ref|XP_002915554.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3-like
[Ailuropoda melanoleuca]
Length = 446
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 232 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 290
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 291 RLTALLLPPDP 301
>gi|126341058|ref|XP_001364066.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Monodelphis
domestica]
Length = 483
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|440895427|gb|ELR47618.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Bos grunniens mutus]
Length = 491
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 273 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 331
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 332 RLTALLLPPDP 342
>gi|576884|gb|AAA53377.1| D15Kzl, partial [Mus musculus]
Length = 461
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 316 LWQYIKTHKLQDPHEREFVLCDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 367
>gi|397488170|ref|XP_003815143.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Pan
paniscus]
Length = 433
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 219 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 277
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 278 RLTALLLPPDP 288
>gi|402865461|ref|XP_003896941.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Papio
anubis]
Length = 491
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 277 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 335
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 336 RLTALLLPPDP 346
>gi|345324251|ref|XP_001513274.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3
[Ornithorhynchus anatinus]
Length = 416
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 202 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 260
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 261 RLTALLLPPDP 271
>gi|195352792|ref|XP_002042895.1| GM11510 [Drosophila sechellia]
gi|194126942|gb|EDW48985.1| GM11510 [Drosophila sechellia]
Length = 509
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 314 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 365
>gi|73978714|ref|XP_850327.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 isoform 3
[Canis lupus familiaris]
Length = 483
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTALLLPPDP 338
>gi|431895745|gb|ELK05164.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Pteropus alecto]
Length = 398
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 184 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 242
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 243 RLTALLLPPDP 253
>gi|351695431|gb|EHA98349.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Heterocephalus glaber]
Length = 381
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 167 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 225
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 226 RLTALLLPPDP 236
>gi|240273373|gb|EER36894.1| SWIB/MDM2 domain-containing protein [Ajellomyces capsulatus H143]
Length = 292
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++SR +VW YI+ NNLQDP ++ + CD +R++
Sbjct: 231 QLSRPQAVKKVWQYIRENNLQDPADRRQIRCDDLMRAVF 269
>gi|194210156|ref|XP_001914781.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Equus
caballus]
Length = 389
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 175 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 233
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 234 RLTALLLPPDP 244
>gi|332023941|gb|EGI64159.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Acromyrmex echinatior]
Length = 499
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I R++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACPRMKFAEIPQRLNPLLHPPDP 354
>gi|224133944|ref|XP_002321698.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222868694|gb|EEF05825.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 515
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L TL E +G +R + +W Y+K+ LQ+PN+ + CD L+ L G+ +++ +
Sbjct: 303 LSPTLSEILGIEVETRPRILVAIWHYVKSRKLQNPNDPSFFTCDPPLQK-LFGEEKMKFS 361
Query: 86 ELPALIKLH 94
++ I LH
Sbjct: 362 QVLQRISLH 370
>gi|358366934|dbj|GAA83554.1| C2H2 finger domain protein [Aspergillus kawachii IFO 4308]
Length = 1111
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
G+ +SR R+W YI ++LQDPN++ + CD +R++ + R+ + + ++ +
Sbjct: 227 GEVTLSRPQTVKRLWQYIHEHDLQDPNDRRQIRCDDAMRAVFK-QDRIHMFTMTKILSQN 285
Query: 95 F 95
F
Sbjct: 286 F 286
>gi|259481167|tpe|CBF74446.1| TPA: SWI-SNF complex subunit (BAF60b), putative (AFU_orthologue;
AFUA_1G06310) [Aspergillus nidulans FGSC A4]
Length = 472
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LR+I G+ ++
Sbjct: 250 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDDRLRAIF-GRDQMFFP 308
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 309 QIPESIGPHTSPLDP 323
>gi|426228651|ref|XP_004008412.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Ovis aries]
Length = 433
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 219 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 277
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 278 RLTALLLPPDP 288
>gi|354478324|ref|XP_003501365.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Cricetulus
griseus]
Length = 417
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 203 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 261
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 262 RLTALLLPPDP 272
>gi|307214555|gb|EFN89540.1| Upstream activation factor subunit UAF30 [Harpegnathos saltator]
Length = 302
Score = 42.4 bits (98), Expect = 0.036, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG +++R +VWS IK NL DP NK CD++L ++ G R
Sbjct: 230 ITLSPELAAIVGAEQMARHEVVKKVWSIIKERNLYDPKNKQFAICDEELMKVI-GVKRFR 288
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 289 TFGMMKYLKNHF 300
>gi|307183318|gb|EFN70187.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Camponotus floridanus]
Length = 499
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I R++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACPRMKFAEIPQRLNPLLHPPDP 354
>gi|355748146|gb|EHH52643.1| hypothetical protein EGM_13113, partial [Macaca fascicularis]
Length = 439
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 225 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 283
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 284 RLTALLLPPDP 294
>gi|307206105|gb|EFN84185.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Harpegnathos saltator]
Length = 499
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I R++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFINCDKYLEQIF-ACPRMKFAEIPQRLNPLLHPPDP 354
>gi|302676964|ref|XP_003028165.1| hypothetical protein SCHCODRAFT_258441 [Schizophyllum commune H4-8]
gi|300101853|gb|EFI93262.1| hypothetical protein SCHCODRAFT_258441 [Schizophyllum commune H4-8]
Length = 1137
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G + SR G +W+Y+K N LQD ++ +++ D L+ L G++ ++ LPA
Sbjct: 200 LANIIGIKQESRQGVIQALWNYVKINGLQDKVDRTMIHLDGPLKQ-LAGRADIQFQMLPA 258
Query: 90 L 90
L
Sbjct: 259 L 259
>gi|26386246|dbj|BAB31685.2| unnamed protein product [Mus musculus]
Length = 224
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 10 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 68
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 69 RLTALLLPPDP 79
>gi|156550207|ref|XP_001601313.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Nasonia vitripennis]
Length = 499
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I R++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREYINCDKYLEQIF-ACPRMKFAEIPQRLNPLLHPPDP 354
>gi|1549247|gb|AAC50697.1| SWI/SNF complex 60 KDa subunit [Homo sapiens]
Length = 469
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 255 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 313
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 314 RLTALLLPPDP 324
>gi|321458353|gb|EFX69423.1| hypothetical protein DAPPUDRAFT_130021 [Daphnia pulex]
Length = 449
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L +G +R +W YIKT+ LQD + + CD+ + I G R++ A
Sbjct: 230 LDSRLARLLGIHTQTRPMVISALWQYIKTHKLQDHQEREFIRCDKYMEQIF-GCPRMKFA 288
Query: 86 ELPA-LIKLHFPKDP 99
E+P L L P DP
Sbjct: 289 EIPQRLNPLLHPPDP 303
>gi|170097153|ref|XP_001879796.1| SWI/SNF complex protein [Laccaria bicolor S238N-H82]
gi|164645199|gb|EDR09447.1| SWI/SNF complex protein [Laccaria bicolor S238N-H82]
Length = 382
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 12 DNPKKLANLIDLVNLPST------LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K+ ++ L + P L +G SR+G W+YIK LQD ++ +
Sbjct: 146 DQPTKIRVVMYLEHFPEQYKVVPELGNILGIKEDSRIGVIQTFWNYIKLQGLQDKVDRRL 205
Query: 66 VNCDQKLRSILMGKSRVELAELPALI 91
V D KLR I G + ++P L+
Sbjct: 206 VRADDKLRQIF-GTDTIPFQKIPDLV 230
>gi|1549243|gb|AAC50695.1| SWI/SNF complex 60 KDa subunit [Homo sapiens]
Length = 435
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 280 LWQYIKTHKLQDPHEREFVICDKYLQQIFETQ-RMKFSEIPQRLHALLMPPEP 331
>gi|58865508|ref|NP_001011966.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 3 [Rattus norvegicus]
gi|55154116|gb|AAH85349.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Rattus norvegicus]
gi|149046517|gb|EDL99342.1| rCG24403, isoform CRA_a [Rattus norvegicus]
Length = 470
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 256 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 314
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 315 RLTGLLLPPDP 325
>gi|149046518|gb|EDL99343.1| rCG24403, isoform CRA_b [Rattus norvegicus]
Length = 483
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +E+P
Sbjct: 269 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFSEIPQ 327
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 328 RLTGLLLPPDP 338
>gi|432858243|ref|XP_004068863.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Oryzias latipes]
Length = 514
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W Y+KT+ LQDP+ + +NCD+ L I + R++ +E+P L L P +P
Sbjct: 318 LWQYVKTHKLQDPHEREFINCDKYLHQIFETQ-RMKFSEIPQRLHALLMPPEP 369
>gi|115389354|ref|XP_001212182.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194578|gb|EAU36278.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 388
Score = 42.0 bits (97), Expect = 0.043, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LR+I G+ ++
Sbjct: 261 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQENEEKRLVRCDHRLRAIF-GRDQMFFP 319
Query: 86 ELPALIKLHF-PKDP 99
++P I H P DP
Sbjct: 320 QIPESIGPHTSPLDP 334
>gi|308497482|ref|XP_003110928.1| hypothetical protein CRE_04566 [Caenorhabditis remanei]
gi|308242808|gb|EFO86760.1| hypothetical protein CRE_04566 [Caenorhabditis remanei]
Length = 326
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
VK DN K + L + + L++ + R +W YIK NL+DP N
Sbjct: 198 VKDPNADNSGKFGPMTKLCYISTELQQITKDQWMKRCDVVKVLWDYIKEKNLKDPKNGQF 257
Query: 66 VNCDQKLRSILMGKSRVELAELPALIKLH 94
+ CD L+SI K+R++ + + H
Sbjct: 258 ILCDDVLKSIF-NKNRIKGFGMTKFLTKH 285
>gi|195439048|ref|XP_002067443.1| GK16421 [Drosophila willistoni]
gi|194163528|gb|EDW78429.1| GK16421 [Drosophila willistoni]
Length = 529
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 334 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 385
>gi|3378134|gb|AAC28455.1| brahma associated protein 60 kDa [Drosophila melanogaster]
Length = 515
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 320 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 371
>gi|24641689|ref|NP_511143.2| brahma associated protein 60kD [Drosophila melanogaster]
gi|195566518|ref|XP_002106827.1| GD15903 [Drosophila simulans]
gi|7292842|gb|AAF48235.1| brahma associated protein 60kD [Drosophila melanogaster]
gi|17862102|gb|AAL39528.1| LD09078p [Drosophila melanogaster]
gi|194204219|gb|EDX17795.1| GD15903 [Drosophila simulans]
Length = 515
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 320 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 371
>gi|255586318|ref|XP_002533810.1| nuclear receptor binding set domain containing protein 1, nsd,
putative [Ricinus communis]
gi|223526264|gb|EEF28579.1| nuclear receptor binding set domain containing protein 1, nsd,
putative [Ricinus communis]
Length = 1586
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 30 LREFVGQSR------ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
L EFV R +S+ + YIK NNL+DP K+ + CD +L++ L GK R
Sbjct: 371 LLEFVSHMRNGDTSMLSQFDVQALLLDYIKRNNLRDPRQKSQIICDSRLKN-LFGKPRAG 429
Query: 84 LAELPALIKLHF 95
E+ L++ HF
Sbjct: 430 HFEMLKLLEYHF 441
>gi|218184875|gb|EEC67302.1| hypothetical protein OsI_34293 [Oryza sativa Indica Group]
Length = 1681
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 28 STLREFVGQSR------ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
S L EF+G R IS+ + + Y+K NL+DP K+ + CD +L + L K R
Sbjct: 279 SELLEFIGHMRNGDISYISQFDVQILLLEYVKQKNLRDPRRKSQIICDARLAN-LFRKPR 337
Query: 82 VELAELPALIKLHF 95
V E+ L+++HF
Sbjct: 338 VGHFEMLKLLEMHF 351
>gi|195478158|ref|XP_002100431.1| Bap60 [Drosophila yakuba]
gi|194187955|gb|EDX01539.1| Bap60 [Drosophila yakuba]
Length = 515
Score = 42.0 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 320 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 371
>gi|326477443|gb|EGE01453.1| SWIB/MDM2 domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 272
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW YI+ + LQDPN++ + CD +R +
Sbjct: 208 GEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 249
>gi|193678849|ref|XP_001945566.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Acyrthosiphon pisum]
Length = 499
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W +IKT+ LQD + K +NCD+ L I +R++ AE+P L L P DP
Sbjct: 303 LWQFIKTHKLQDSHEKEYINCDKYLEQIF-NCTRMKFAEVPQRLNTLLHPPDP 354
>gi|326434965|gb|EGD80535.1| hypothetical protein PTSG_01126 [Salpingoeca sp. ATCC 50818]
Length = 436
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL-HFPKDP 99
+W+YI+ +NLQD +++V+ CDQ L+S G +++E+ +L++ P DP
Sbjct: 202 LWTYIREHNLQDERDRHVIRCDQPLQSAF-GVGTFKVSEMASLVRTCLLPMDP 253
>gi|393222641|gb|EJD08125.1| SWIB-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 370
Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L + L + R+SR ++W YIK N+LQ+P+N+ + CD +LR +
Sbjct: 298 LSAPLSALLEVDRLSRPQVVKQLWEYIKGNDLQNPSNRREILCDDRLRPVF 348
>gi|327295951|ref|XP_003232670.1| SWIB/MDM2 domain-containing protein [Trichophyton rubrum CBS
118892]
gi|326464981|gb|EGD90434.1| SWIB/MDM2 domain-containing protein [Trichophyton rubrum CBS
118892]
Length = 272
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW YI+ + LQDPN++ + CD +R +
Sbjct: 208 GEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 249
>gi|118786289|ref|XP_315349.3| AGAP005336-PA [Anopheles gambiae str. PEST]
gi|116126248|gb|EAA11403.3| AGAP005336-PA [Anopheles gambiae str. PEST]
Length = 502
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + + CD+ L I G R++ AE+P L L P DP
Sbjct: 305 LWQYIKTHKLQDAHEREYIACDKYLEQIF-GCPRMKFAEIPQRLNPLLHPPDP 356
>gi|195167215|ref|XP_002024429.1| GL15872 [Drosophila persimilis]
gi|198469679|ref|XP_001355087.2| GA18095 [Drosophila pseudoobscura pseudoobscura]
gi|194107827|gb|EDW29870.1| GL15872 [Drosophila persimilis]
gi|198146984|gb|EAL32143.2| GA18095 [Drosophila pseudoobscura pseudoobscura]
Length = 506
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 311 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 362
>gi|194895640|ref|XP_001978304.1| GG19519 [Drosophila erecta]
gi|190649953|gb|EDV47231.1| GG19519 [Drosophila erecta]
Length = 515
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 320 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 371
>gi|296824178|ref|XP_002850590.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238838144|gb|EEQ27806.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 521
Score = 42.0 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 17/92 (18%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL--------- 76
L L V + +R G R+W Y+K + LQ+ K + CD +LR+I
Sbjct: 290 LSKELAAIVDTDKDTRAGIVARIWEYVKASGLQESEEKRTIQCDDRLRAIFGCEKMYFPA 349
Query: 77 ------MGKSRVELAELPALIKL--HFPKDPK 100
+ +E +LP I++ F KDPK
Sbjct: 350 IPESTAAHTATLEPIKLPYTIRVDPEFQKDPK 381
>gi|194763747|ref|XP_001963994.1| GF20965 [Drosophila ananassae]
gi|190618919|gb|EDV34443.1| GF20965 [Drosophila ananassae]
Length = 509
Score = 42.0 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 314 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 365
>gi|348508746|ref|XP_003441914.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2-like
[Oreochromis niloticus]
Length = 501
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I G R+ +E+P
Sbjct: 287 LARLLGVHTQTRASIMQALWLYIKNNKLQDSHEKEYINCNRYFRQIF-GCPRMRFSEIP 344
>gi|315045241|ref|XP_003171996.1| hypothetical protein MGYG_06538 [Arthroderma gypseum CBS 118893]
gi|311344339|gb|EFR03542.1| hypothetical protein MGYG_06538 [Arthroderma gypseum CBS 118893]
Length = 272
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW YI+ + LQDPN++ + CD +R +
Sbjct: 208 GEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 249
>gi|156390228|ref|XP_001635173.1| predicted protein [Nematostella vectensis]
gi|156222264|gb|EDO43110.1| predicted protein [Nematostella vectensis]
Length = 1583
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L+ L L +GQ ++SR +W+ IK NL DP +K CD +L + G RV
Sbjct: 1505 LMVLSPELAAILGQDKMSRSDVVKGMWAIIKERNLMDPKDKRFHICDDQLLKVF-GTKRV 1563
Query: 83 ELAELPALIKLHFPKDP 99
+ + +K H KDP
Sbjct: 1564 KSFSMMKYLK-HHVKDP 1579
>gi|317419380|emb|CBN81417.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2 [Dicentrarchus labrax]
Length = 502
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I G R+ +E+P
Sbjct: 288 LARLLGVHTQTRASIMQALWLYIKNNKLQDSHEKEYINCNRYFRQIF-GCPRMRFSEIP 345
>gi|195133414|ref|XP_002011134.1| GI16377 [Drosophila mojavensis]
gi|193907109|gb|EDW05976.1| GI16377 [Drosophila mojavensis]
Length = 504
Score = 41.6 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 309 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 360
>gi|268572225|ref|XP_002641267.1| Hypothetical protein CBG05179 [Caenorhabditis briggsae]
Length = 324
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 6 VKKTVIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
VK D K + L + + L++ + R +W YIK NNL+DP N
Sbjct: 160 VKDPNADMSGKFGPMTKLCYISTELQQITKDQWMKRCDVVKVLWDYIKANNLKDPKNGQF 219
Query: 66 VNCDQKLRSIL 76
+ CD +RSI
Sbjct: 220 IICDDVMRSIF 230
>gi|327264469|ref|XP_003217036.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Anolis
carolinensis]
Length = 458
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I R++ +E+P L L P +P
Sbjct: 262 LWQYIKTHKLQDPHEREYVICDKYLQQIFES-PRMKFSEIPQRLHALLMPPEP 313
>gi|326476557|gb|EGE00567.1| hypothetical protein TESG_07838 [Trichophyton tonsurans CBS 112818]
Length = 265
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW YI+ + LQDPN++ + CD +R +
Sbjct: 201 GEVTLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 242
>gi|12836787|dbj|BAB23813.1| unnamed protein product [Mus musculus]
Length = 381
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G SR +W Y+KTN LQD ++K +N D+ + I R++ E+P
Sbjct: 167 LARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFCEIPQ 225
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 226 RLTALLLPPDP 236
>gi|189241454|ref|XP_973382.2| PREDICTED: similar to brg-1 associated factor [Tribolium castaneum]
gi|270014164|gb|EFA10612.1| hypothetical protein TcasGA2_TC012873 [Tribolium castaneum]
Length = 497
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + + CD+ L I G R++ AE+P L L P DP
Sbjct: 300 LWQYIKTHRLQDAHEREYIVCDKYLEQIF-GCPRMKFAEIPQRLNPLLHPPDP 351
>gi|429965053|gb|ELA47050.1| hypothetical protein VCUG_01495 [Vavraia culicis 'floridensis']
Length = 376
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 16 KLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSI 75
+ N D L + +R+ + ++ G + +W YI+ N L + +V CD+KLR I
Sbjct: 182 EFENTFDRYKLAAPVRKLFNKETETKTGLLIDLWKYIRLNRLITETSDFIVTCDEKLREI 241
Query: 76 LMGKSRVELAELPALIK-LHFPKDP 99
++ ++P L+ L P DP
Sbjct: 242 F-DCDHFKILDMPRLVSALLLPLDP 265
>gi|325186813|emb|CCA21358.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 340
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+++ L +G+ R+SR +W+YI+ N LQDPN+K + D +L+++ ++
Sbjct: 108 LSMSPELAAVMGRDRMSRPQIVKELWNYIRENKLQDPNDKRRIVFDAQLKAVFQREA-AT 166
Query: 84 LAELPALIKLHFPK 97
+ L IK H K
Sbjct: 167 MFSLNKYIKRHVCK 180
>gi|367003327|ref|XP_003686397.1| hypothetical protein TPHA_0G01260 [Tetrapisispora phaffii CBS 4417]
gi|357524698|emb|CCE63963.1| hypothetical protein TPHA_0G01260 [Tetrapisispora phaffii CBS 4417]
Length = 255
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L L+E +G + R +VW YIK +NLQ+ ++ + CD+K++ + K
Sbjct: 124 LSKPLQELLGAEELPRTQVVKQVWDYIKEHNLQNAKDRREILCDEKMKPVFGKK 177
>gi|195396451|ref|XP_002056845.1| GJ16750 [Drosophila virilis]
gi|194146612|gb|EDW62331.1| GJ16750 [Drosophila virilis]
Length = 505
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + +NCD+ L I + R++ AE+P L L P DP
Sbjct: 310 LWQYIKTHKLQDAHEREYINCDKYLEQIFSCQ-RMKFAEIPQRLNPLLHPPDP 361
>gi|26344411|dbj|BAC35856.1| unnamed protein product [Mus musculus]
Length = 305
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 109 LWQYIKTHKLQDPHEREFVLCDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 160
>gi|321459378|gb|EFX70432.1| hypothetical protein DAPPUDRAFT_217355 [Daphnia pulex]
Length = 465
Score = 41.6 bits (96), Expect = 0.061, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 21 IDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
+ V L L + +G + R ++WS IK NL DP NK CD++L+ + G
Sbjct: 390 VKAVKLSPELSDIMGTESMPRPEVVKKMWSIIKERNLYDPKNKQFAVCDEQLQKVF-GVK 448
Query: 81 RVELAELPALIKLHF 95
R + +K HF
Sbjct: 449 RFRTFGMMKYLKAHF 463
>gi|392561326|gb|EIW54508.1| SWIB-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 267
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
R+SR ++W++IK NN+Q+P NK + CD R I
Sbjct: 202 RLSRPQTVKQLWNHIKANNMQNPENKKEIICDDGFREIF 240
>gi|167521577|ref|XP_001745127.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776741|gb|EDQ90360.1| predicted protein [Monosiga brevicollis MX1]
Length = 434
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 23 LVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
L L S L VG + +R ++W+YI+ +NLQ+P+ K + CD+ LR++ K +
Sbjct: 349 LKQLSSVLAVVVGCAEETRPQVVSKLWTYIRGHNLQNPDKKREILCDEALRAVF--KKQA 406
Query: 83 ELAELPA 89
+ A+L A
Sbjct: 407 KFAKLYA 413
>gi|297262334|ref|XP_001111166.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like isoform
6 [Macaca mulatta]
Length = 598
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 402 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 453
>gi|297262332|ref|XP_001111275.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like isoform
9 [Macaca mulatta]
Length = 639
Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 443 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 494
>gi|297262336|ref|XP_001111207.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like isoform
7 [Macaca mulatta]
Length = 598
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 443 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 494
>gi|119578529|gb|EAW58125.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_e [Homo
sapiens]
gi|119578530|gb|EAW58126.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_e [Homo
sapiens]
gi|119578531|gb|EAW58127.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_e [Homo
sapiens]
Length = 639
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 443 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 494
>gi|119578524|gb|EAW58120.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_a [Homo
sapiens]
Length = 639
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 443 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 494
>gi|338731806|ref|YP_004662925.1| hypothetical protein SNE_B24300 [Simkania negevensis Z]
gi|336481189|emb|CCB87789.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 85
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L E +G + R ++W YIK + QDP NK + D+KL + K + + E+
Sbjct: 19 LSEVIGSGPMPRTQVTKKIWDYIKKHKRQDPENKRNIIPDEKLAKVFGSKMTINMFEMTK 78
Query: 90 LIKLHF 95
+ H
Sbjct: 79 KVNKHL 84
>gi|121702547|ref|XP_001269538.1| SWI-SNF complex subunit (BAF60b), putative [Aspergillus clavatus
NRRL 1]
gi|119397681|gb|EAW08112.1| SWI-SNF complex subunit (BAF60b), putative [Aspergillus clavatus
NRRL 1]
Length = 508
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K +V CD +LRSI G+ ++
Sbjct: 286 LSKELAEVLDVEEETRSGIVLGIWDYIRAMGLQEDEEKRLVRCDHRLRSIF-GRDQMFFP 344
Query: 86 ELPALIKLH 94
++P I H
Sbjct: 345 QIPENIGPH 353
>gi|332839411|ref|XP_509054.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 7
[Pan troglodytes]
gi|397511072|ref|XP_003825905.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Pan paniscus]
Length = 639
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 443 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 494
>gi|119578526|gb|EAW58122.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_c [Homo
sapiens]
gi|119578528|gb|EAW58124.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_c [Homo
sapiens]
Length = 598
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 443 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 494
>gi|443922814|gb|ELU42191.1| SWIB domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 282
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L F G S +SR R+W +IK NNLQ+P +K + CD +++ L ++ +
Sbjct: 183 LSPALAAFTGVS-LSRPQIVKRLWDHIKANNLQNPQDKREILCDDQMKG-LFNVDKINMF 240
Query: 86 ELPALIKLHFPKD 98
++ +I H D
Sbjct: 241 QMNKVIGAHIVGD 253
>gi|255714771|ref|XP_002553667.1| KLTH0E04246p [Lachancea thermotolerans]
gi|238935049|emb|CAR23230.1| KLTH0E04246p [Lachancea thermotolerans CBS 6340]
Length = 209
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
+ L L++ VG+ ++R +VW +IK +LQ+P ++ + CD+ ++ I K+
Sbjct: 116 MQLSDELQKLVGEPEMARTQVVKKVWEHIKEQDLQNPQDRREILCDELMKPIFGDKT 172
>gi|222641965|gb|EEE70097.1| hypothetical protein OsJ_30101 [Oryza sativa Japonica Group]
Length = 1764
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 20 LIDLV-NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMG 78
L+D V N+ + + + Q + L + YIK NL+DP K+ + CD L+S L G
Sbjct: 686 LLDFVANMKNGDKSVLSQFEVQSL-----LLDYIKRENLRDPRRKSQIICDSMLKS-LFG 739
Query: 79 KSRVELAELPALIKLHF 95
K+RV E+ L++ HF
Sbjct: 740 KARVGHFEMLKLLESHF 756
>gi|218202501|gb|EEC84928.1| hypothetical protein OsI_32136 [Oryza sativa Indica Group]
Length = 1764
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 20 LIDLV-NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMG 78
L+D V N+ + + + Q + L + YIK NL+DP K+ + CD L+S L G
Sbjct: 686 LLDFVANMKNGDKSVLSQFEVQSL-----LLDYIKRENLRDPRRKSQIICDSMLKS-LFG 739
Query: 79 KSRVELAELPALIKLHF 95
K+RV E+ L++ HF
Sbjct: 740 KARVGHFEMLKLLESHF 756
>gi|297691800|ref|XP_002823254.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Pongo abelii]
Length = 644
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 448 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 499
>gi|303289769|ref|XP_003064172.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
gi|226454488|gb|EEH51794.1| high mobility group family B protein [Micromonas pusilla CCMP1545]
Length = 258
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 27 PSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
P+ + G ISR R+WSY K+ L DP NK V D++L+ +L
Sbjct: 186 PALTKFLGGDKTISRANLTSRLWSYFKSKELMDPANKRWVVADKQLKDLL 235
>gi|114644835|ref|XP_001155773.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 5
[Pan troglodytes]
gi|397511074|ref|XP_003825906.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Pan paniscus]
Length = 598
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 443 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 494
>gi|238879408|gb|EEQ43046.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 172
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
L L +G + SR +W+YIK +NLQ+P +K + CD+KL+ + K
Sbjct: 59 LSPELTNVIGVDKCSRPQVVKLLWAYIKDHNLQNPQDKRQIECDEKLQKLFKKK 112
>gi|119578527|gb|EAW58123.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1, isoform CRA_d [Homo
sapiens]
Length = 598
Score = 41.2 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 402 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 453
>gi|297691802|ref|XP_002823255.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Pongo abelii]
Length = 603
Score = 41.2 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 448 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 499
>gi|15834637|ref|NP_296396.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia muridarum
Nigg]
gi|270284803|ref|ZP_06194197.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia muridarum
Nigg]
gi|270288832|ref|ZP_06195134.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia muridarum
Weiss]
gi|301336183|ref|ZP_07224385.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia muridarum
MopnTet14]
gi|7190053|gb|AAF38905.1| DNA topoisomerase I [Chlamydia muridarum Nigg]
Length = 865
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 47 RVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
++W+YIK LQ PNNK V+ D K++ ++ G +++ L I+ H K
Sbjct: 814 KIWAYIKEQGLQSPNNKRVIVPDSKMKHVI-GDDPIDMFALSKKIQAHLTK 863
>gi|50304323|ref|XP_452111.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641243|emb|CAH02504.1| KLLA0B13024p [Kluyveromyces lactis]
Length = 124
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
DNP + + V L L+EF+ + R VW YIK ++LQ+P ++ + CD
Sbjct: 25 DNPNSIH--LKKVGLSPELQEFLKVEEMPRTQVVKSVWDYIKEHDLQNPEDRREIICDDA 82
Query: 72 LRSILMGK 79
++ I K
Sbjct: 83 MKPIFGEK 90
>gi|384493380|gb|EIE83871.1| hypothetical protein RO3G_08576 [Rhizopus delemar RA 99-880]
Length = 262
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G +SR ++W YIK N+LQDP ++ + CD KL+ I
Sbjct: 176 GAKELSRPELVQKLWKYIKENDLQDPADRRFILCDVKLKKIF 217
>gi|302816240|ref|XP_002989799.1| hypothetical protein SELMODRAFT_43289 [Selaginella moellendorffii]
gi|302816893|ref|XP_002990124.1| hypothetical protein SELMODRAFT_43292 [Selaginella moellendorffii]
gi|300142137|gb|EFJ08841.1| hypothetical protein SELMODRAFT_43292 [Selaginella moellendorffii]
gi|300142365|gb|EFJ09066.1| hypothetical protein SELMODRAFT_43289 [Selaginella moellendorffii]
Length = 397
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R W YIK LQ+P++ VVNCD L+ IL G+ RV+
Sbjct: 193 LSPPLAELLGVEVETRARIIAAFWHYIKGKKLQNPSDPTVVNCDLPLQRIL-GEDRVKFT 251
Query: 86 ELPALIKLH 94
+ L +LH
Sbjct: 252 SI--LNRLH 258
>gi|261199726|ref|XP_002626264.1| SWIB/MDM2 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239594472|gb|EEQ77053.1| SWIB/MDM2 domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239615636|gb|EEQ92623.1| SWIB/MDM2 domain-containing protein [Ajellomyces dermatitidis ER-3]
gi|327354262|gb|EGE83119.1| SWIB/MDM2 domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 281
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW YI+ N+LQDP+++ + CD +R++
Sbjct: 217 GEITLSRPQTVKKVWQYIRENSLQDPSDRRQILCDDLMRAVF 258
>gi|170058412|ref|XP_001864911.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877491|gb|EDS40874.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL L G + R +VW+ IK NL DP NK CD +L+ ++ G R
Sbjct: 180 NLSPELAAICGAEALPRHEVVKKVWAIIKERNLYDPKNKQYAICDSELQKVI-GVKRFRT 238
Query: 85 AELPALIKLHF 95
+ +K HF
Sbjct: 239 FGMLKYLKPHF 249
>gi|170595634|ref|XP_001902459.1| brahma associated protein 60 kDa [Brugia malayi]
gi|158589855|gb|EDP28690.1| brahma associated protein 60 kDa, putative [Brugia malayi]
Length = 237
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIK- 92
+G + +R +W YIKT+ LQD + ++ +NCD L I G R+ E+P ++
Sbjct: 27 LGMATETRPKIIEALWQYIKTHKLQDQSERDNINCDCYLEQIF-GVKRMRFMEIPQRLQN 85
Query: 93 -LHFPKDP 99
LH P DP
Sbjct: 86 LLHQP-DP 92
>gi|301774016|ref|XP_002922413.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Ailuropoda melanoleuca]
Length = 551
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 355 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 406
>gi|444515362|gb|ELV10861.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Tupaia chinensis]
Length = 424
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 228 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 279
>gi|170097161|ref|XP_001879800.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645203|gb|EDR09451.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 404
Score = 40.8 bits (94), Expect = 0.092, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
D P K I +V L +G SR+G W+YIK LQD ++ +V D K
Sbjct: 167 DQPTK----IRVVMYVPELGNILGIKEDSRIGVIQTFWNYIKLQGLQDKVDRRLVRADDK 222
Query: 72 LRSILMGKSRVELAELPALI 91
LR I G + ++P L+
Sbjct: 223 LRQIF-GTDTIPFQKIPDLV 241
>gi|405966284|gb|EKC31589.1| Upstream activation factor subunit spp27 [Crassostrea gigas]
Length = 248
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+L L E +G +++R ++W+ IK NLQDP NK + CD +L ++ K RV+
Sbjct: 174 SLSPALAEVMGTDQMARSEVVKKMWAIIKERNLQDPKNKQFLLCDDQLFNVFK-KKRVKT 232
Query: 85 AELPALIKLHF 95
+ +++ H
Sbjct: 233 FGMMKILRNHI 243
>gi|344276118|ref|XP_003409856.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Loxodonta
africana]
Length = 485
Score = 40.8 bits (94), Expect = 0.096, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +
Sbjct: 267 LDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFS 325
Query: 86 ELPA-LIKLHFPKDP 99
E+P L L P DP
Sbjct: 326 EIPQRLTALLLPPDP 340
>gi|326936487|ref|XP_003214285.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Meleagris gallopavo]
Length = 400
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 204 LWQYIKTHKLQDPHEREYVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 255
>gi|414864334|tpg|DAA42891.1| TPA: hypothetical protein ZEAMMB73_441008 [Zea mays]
Length = 495
Score = 40.8 bits (94), Expect = 0.098, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK NNL+DP K+ + CD +L L K+RV E+ L+++HF
Sbjct: 250 YIKKNNLRDPQRKSQIICDSRLH-FLFRKARVAHFEMLKLLEMHF 293
>gi|157824218|ref|NP_001102222.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Rattus norvegicus]
gi|149032060|gb|EDL86972.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 (predicted) [Rattus
norvegicus]
Length = 515
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|133908629|ref|NP_003067.3| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform a [Homo sapiens]
gi|347543729|ref|NP_001231542.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Sus scrofa]
gi|296211626|ref|XP_002752491.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Callithrix jacchus]
gi|402885952|ref|XP_003906407.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Papio anubis]
gi|410964372|ref|XP_003988729.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Felis catus]
gi|238054318|sp|Q96GM5.2|SMRD1_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit A;
AltName: Full=BRG1-associated factor 60A; Short=BAF60A;
AltName: Full=SWI/SNF complex 60 kDa subunit
gi|167774207|gb|ABZ92538.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [synthetic construct]
gi|261859058|dbj|BAI46051.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [synthetic construct]
gi|380815816|gb|AFE79782.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform a [Macaca
mulatta]
gi|383420967|gb|AFH33697.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform a [Macaca
mulatta]
gi|384948938|gb|AFI38074.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform a [Macaca
mulatta]
gi|410217372|gb|JAA05905.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Pan troglodytes]
gi|410253570|gb|JAA14752.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Pan troglodytes]
gi|410300590|gb|JAA28895.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Pan troglodytes]
gi|410353925|gb|JAA43566.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Pan troglodytes]
Length = 515
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|348580137|ref|XP_003475835.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Cavia
porcellus]
Length = 515
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|344267932|ref|XP_003405818.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Loxodonta africana]
Length = 515
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|224099053|ref|XP_002193185.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Taeniopygia guttata]
Length = 476
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 280 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 331
>gi|363744983|ref|XP_424488.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Gallus gallus]
Length = 512
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 316 LWQYIKTHKLQDPHEREYVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 367
>gi|157133783|ref|XP_001663011.1| hypothetical protein AaeL_AAEL012865 [Aedes aegypti]
gi|108870706|gb|EAT34931.1| AAEL012865-PA [Aedes aegypti]
Length = 271
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL L G + R +VW+ IK NL DP NK CD +L+ ++ G R
Sbjct: 200 NLSPELAAICGADALPRHEVVKKVWTIIKERNLYDPKNKQYAICDSELQKVI-GVKRFRT 258
Query: 85 AELPALIKLHF 95
+ +K HF
Sbjct: 259 FGMLKYLKPHF 269
>gi|344267934|ref|XP_003405819.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Loxodonta africana]
Length = 474
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|133908631|ref|NP_620710.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform b [Homo sapiens]
gi|296211628|ref|XP_002752492.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Callithrix jacchus]
gi|395744255|ref|XP_003778072.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 [Pongo
abelii]
gi|402885954|ref|XP_003906408.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Papio anubis]
gi|410964374|ref|XP_003988730.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Felis catus]
gi|380815818|gb|AFE79783.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform b [Macaca
mulatta]
gi|383420969|gb|AFH33698.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform b [Macaca
mulatta]
gi|384948940|gb|AFI38075.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 isoform b [Macaca
mulatta]
Length = 474
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|125347396|ref|NP_114030.2| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Mus musculus]
gi|238054366|sp|Q61466.3|SMRD1_MOUSE RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit A;
AltName: Full=BRG1-associated factor 60A; Short=BAF60A;
AltName: Full=Protein D15KZ1; AltName: Full=SWI/SNF
complex 60 kDa subunit
Length = 515
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 319 LWQYIKTHKLQDPHEREFVLCDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 370
>gi|410953236|ref|XP_003983280.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 3 [Felis
catus]
Length = 483
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +
Sbjct: 265 LDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFS 323
Query: 86 ELPA-LIKLHFPKDP 99
E+P L L P DP
Sbjct: 324 EIPQRLTALLLPPDP 338
>gi|169847147|ref|XP_001830285.1| hypothetical protein CC1G_01921 [Coprinopsis cinerea okayama7#130]
gi|116508537|gb|EAU91432.1| hypothetical protein CC1G_01921 [Coprinopsis cinerea okayama7#130]
Length = 276
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L V ++SR ++W YIK N+LQ+P NK + CD L+++
Sbjct: 203 LSEPLSAVVQAEKMSRPQVVKQLWEYIKGNDLQNPKNKREIMCDASLKAVF 253
>gi|355561187|gb|EHH17873.1| hypothetical protein EGK_14355 [Macaca mulatta]
Length = 483
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G SR +W Y+KTN LQD ++K +N D+ + I R++ +
Sbjct: 265 LDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSHDKEYINGDKYFQQIF-DCPRLKFS 323
Query: 86 ELPA-LIKLHFPKDP 99
E+P L L P DP
Sbjct: 324 EIPQRLTALLLPPDP 338
>gi|302681001|ref|XP_003030182.1| hypothetical protein SCHCODRAFT_57454 [Schizophyllum commune H4-8]
gi|300103873|gb|EFI95279.1| hypothetical protein SCHCODRAFT_57454 [Schizophyllum commune H4-8]
Length = 278
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L + + ++SR ++W YIK N LQ+P+NK + CD LR +
Sbjct: 204 LSEPLSAVLNEQKLSRPQVVKQLWVYIKANELQNPSNKREIVCDDALRRVF 254
>gi|218563706|ref|NP_001136258.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Xenopus laevis]
gi|118763700|gb|AAI28686.1| Smarcd1 protein [Xenopus laevis]
Length = 507
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + + CD+ L+ I + R++ +E+P L L P +P
Sbjct: 311 LWQYIKTHKLQDPHEREFIICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 362
>gi|89267384|emb|CAJ82676.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Xenopus (Silurana)
tropicalis]
Length = 508
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + + CD+ L+ I + R++ +E+P L L P +P
Sbjct: 312 LWQYIKTHKLQDPHEREFIICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 363
>gi|363744985|ref|XP_003643166.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Gallus gallus]
Length = 471
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 316 LWQYIKTHKLQDPHEREYVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 367
>gi|125980237|ref|XP_001354143.1| GA11609 [Drosophila pseudoobscura pseudoobscura]
gi|195173955|ref|XP_002027749.1| GL18416 [Drosophila persimilis]
gi|54642447|gb|EAL31195.1| GA11609 [Drosophila pseudoobscura pseudoobscura]
gi|194114711|gb|EDW36754.1| GL18416 [Drosophila persimilis]
Length = 246
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%)
Query: 14 PKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLR 73
P+K NL L +G + R +VW+ IK +L DP NK CD++L
Sbjct: 164 PRKSTGFTRAYNLSPELSALMGAPSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDEELM 223
Query: 74 SIL 76
++
Sbjct: 224 KVM 226
>gi|347972011|ref|XP_001237540.3| AGAP004492-PA [Anopheles gambiae str. PEST]
gi|333469130|gb|EAU76871.3| AGAP004492-PA [Anopheles gambiae str. PEST]
Length = 289
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E G + R ++W+ IK NL DP N+ CD++LR ++ G R
Sbjct: 219 LSPELAEVCGAESLPRHEVVKKMWAIIKERNLYDPKNRQFAICDEQLRKVI-GVKRFRTF 277
Query: 86 ELPALIKLHF 95
+ +K HF
Sbjct: 278 GMLKYLKPHF 287
>gi|395834876|ref|XP_003790413.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 1
[Otolemur garnettii]
Length = 586
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 390 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 441
>gi|312069275|ref|XP_003137606.1| brahma associated protein [Loa loa]
gi|307767227|gb|EFO26461.1| brahma associated protein [Loa loa]
Length = 459
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + +G + +R +W YIKT+ LQD ++ +NCD L I G R+ E+P
Sbjct: 245 LGKVLGMATETRPKIIEALWQYIKTHKLQDQIERDNINCDSYLEQIF-GVKRMRFMEIPQ 303
Query: 90 LIK--LHFPKDP 99
++ LH P DP
Sbjct: 304 RLQSLLHQP-DP 314
>gi|195336952|ref|XP_002035097.1| GM14512 [Drosophila sechellia]
gi|194128190|gb|EDW50233.1| GM14512 [Drosophila sechellia]
Length = 111
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K NL L +G+S + R +VW+ IK +L DP NK CD +L
Sbjct: 30 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMK 89
Query: 75 IL 76
++
Sbjct: 90 VM 91
>gi|52345630|ref|NP_001004862.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Xenopus (Silurana)
tropicalis]
gi|49250469|gb|AAH74701.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 1 [Xenopus (Silurana)
tropicalis]
Length = 508
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + + CD+ L+ I + R++ +E+P L L P +P
Sbjct: 312 LWQYIKTHKLQDPHEREFIICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 363
>gi|51703908|gb|AAH81086.1| Smarcd1 protein, partial [Xenopus laevis]
Length = 504
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + + CD+ L+ I + R++ +E+P L L P +P
Sbjct: 308 LWQYIKTHKLQDPHEREFIICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 359
>gi|395834878|ref|XP_003790414.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1 isoform 2
[Otolemur garnettii]
Length = 545
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + V CD+ L+ I + R++ +E+P L L P +P
Sbjct: 390 LWQYIKTHKLQDPHEREFVICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 441
>gi|50418293|gb|AAH77955.1| Smarcd1 protein, partial [Xenopus laevis]
Length = 513
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + + CD+ L+ I + R++ +E+P L L P +P
Sbjct: 317 LWQYIKTHKLQDPHEREFIICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 368
>gi|68473744|ref|XP_718975.1| hypothetical protein CaO19.6013 [Candida albicans SC5314]
gi|68473953|ref|XP_718873.1| hypothetical protein CaO19.13434 [Candida albicans SC5314]
gi|46440666|gb|EAK99969.1| hypothetical protein CaO19.13434 [Candida albicans SC5314]
gi|46440772|gb|EAL00074.1| hypothetical protein CaO19.6013 [Candida albicans SC5314]
Length = 136
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L +G + SR +W+YIK +NLQ+P +K + CD+KL+ +
Sbjct: 59 LSPELTNVIGVDKCSRPQVVKLLWAYIKDHNLQNPQDKRQIECDEKLQKLF 109
>gi|302505777|ref|XP_003014595.1| hypothetical protein ARB_07157 [Arthroderma benhamiae CBS 112371]
gi|302652879|ref|XP_003018279.1| hypothetical protein TRV_07729 [Trichophyton verrucosum HKI 0517]
gi|291178416|gb|EFE34206.1| hypothetical protein ARB_07157 [Arthroderma benhamiae CBS 112371]
gi|291181905|gb|EFE37634.1| hypothetical protein TRV_07729 [Trichophyton verrucosum HKI 0517]
Length = 199
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G +SR +VW YI+ + LQDPN++ + CD +R +
Sbjct: 134 TGGFHLSRPQTVKKVWEYIREHELQDPNDRRQIRCDDLMRPVF 176
>gi|170591216|ref|XP_001900366.1| brahma associated protein 60 kDa [Brugia malayi]
gi|158591978|gb|EDP30580.1| brahma associated protein 60 kDa, putative [Brugia malayi]
Length = 342
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 39 ISRLGCFMR------VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIK 92
I RLG R +W YIKT+ LQD + ++ +NCD L I G R+ E+P ++
Sbjct: 242 IQRLGKKTRPKIIEALWQYIKTHKLQDQSERDNINCDCYLEQIF-GVKRMRFMEIPQRLQ 300
Query: 93 --LHFPKDP 99
LH P DP
Sbjct: 301 NLLHQP-DP 308
>gi|63101474|gb|AAH94473.1| Smarcd1 protein, partial [Xenopus laevis]
gi|84708640|gb|AAI10939.1| Smarcd1 protein [Xenopus laevis]
Length = 496
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + + CD+ L+ I + R++ +E+P L L P +P
Sbjct: 300 LWQYIKTHKLQDPHEREFIICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 351
>gi|67516157|ref|XP_657964.1| hypothetical protein AN0360.2 [Aspergillus nidulans FGSC A4]
gi|40746610|gb|EAA65766.1| hypothetical protein AN0360.2 [Aspergillus nidulans FGSC A4]
gi|259489402|tpe|CBF89645.1| TPA: SWIB/MDM2 domain protein (AFU_orthologue; AFUA_1G02020)
[Aspergillus nidulans FGSC A4]
Length = 279
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G + +SR ++W YI ++LQDP+++ + CD +R++
Sbjct: 215 GAATLSRPQTVKKLWEYIHEHDLQDPSDRRQIRCDDPMRAVF 256
>gi|399218972|emb|CCF75859.1| unnamed protein product [Babesia microti strain RI]
Length = 135
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + + + ++R VW YIK LQ+P N+ ++ D KL L GK V E+
Sbjct: 63 LFDLLQEEELTRSEAVKLVWKYIKDQGLQNPENRRIIMSDHKLYP-LFGKEEVTFGEVGK 121
Query: 90 LIKLH 94
I H
Sbjct: 122 AIHKH 126
>gi|393234600|gb|EJD42161.1| SWIB-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 295
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L + R+SR ++W +I+ ++LQ+P N+ + CD +R++ + +V++
Sbjct: 222 LSEPLAHLMQTDRMSRTQVVKKLWEHIRAHDLQNPANRRQIICDPSMRAVF-KQDKVDMF 280
Query: 86 ELPALIKLHF 95
+ L+K H
Sbjct: 281 TMNKLLKDHL 290
>gi|296810550|ref|XP_002845613.1| SWIB/MDM2 domain-containing protein [Arthroderma otae CBS 113480]
gi|238843001|gb|EEQ32663.1| SWIB/MDM2 domain-containing protein [Arthroderma otae CBS 113480]
Length = 272
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G+ +SR +VW YI+ N LQDP ++ + CD +R +
Sbjct: 208 GEVTLSRPQTVKKVWEYIRENELQDPADRRQIRCDGLMRPVF 249
>gi|115396856|ref|XP_001214067.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193636|gb|EAU35336.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1141
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 24 VNLPSTLREFVG-QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRV 82
+NL L +G + +SR ++W YI ++LQDP+++ + CD +R++ + R+
Sbjct: 210 LNLSPALSALLGGEETMSRPQTVKKLWQYIHEHDLQDPSDRRQIRCDDAMRAVFK-QDRI 268
Query: 83 ELAELPALIKLHF 95
+ + ++ +F
Sbjct: 269 HMFTMTKILSQNF 281
>gi|324508670|gb|ADY43656.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 1 [Ascaris suum]
Length = 464
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + +G + +R +W YIKT+ LQD +++ +NCD L + G R+ E+P
Sbjct: 250 LAKLLGMATETRPKIIEALWQYIKTHKLQDAVDRDNINCDSYLEQVF-GCKRMRFMEIPQ 308
Query: 90 LIK--LHFPKDP 99
++ LH P DP
Sbjct: 309 RLQSLLHQP-DP 319
>gi|348690935|gb|EGZ30749.1| hypothetical protein PHYSODRAFT_475850 [Phytophthora sojae]
Length = 383
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L + VG ++R +W+YI+ +NLQDP NK ++ D LR + + +
Sbjct: 146 LSPELAQVVGAETMARPQVVKALWAYIREHNLQDPKNKKLILLDDTLRGVFQ-RDSFTMF 204
Query: 86 ELPALIKLHFPK 97
+ +K H K
Sbjct: 205 SMNKFVKRHVRK 216
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 12 DNPKKLAN--LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCD 69
D+ KK AN +L P L +G+ R++R +W+YI +NLQDP +K + D
Sbjct: 264 DDGKKKANPFYTELAVSPE-LASLLGRDRMARPEIVKALWAYIHEHNLQDPQDKRTILLD 322
Query: 70 QKLRSILMGKS 80
++R + S
Sbjct: 323 DRMRQVFQRDS 333
>gi|440790421|gb|ELR11704.1| SWIB/MDM2 domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 424
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G +R + VW Y++ N L DP ++ V CD+ L+ G +R ++L L+
Sbjct: 228 LGMHTDTRPKIVLGVWQYVRANRLHDPEDRRYVVCDEVLQEAF-GCTRFAASDLTRLVSE 286
Query: 94 HF-PKDP 99
H P DP
Sbjct: 287 HLSPADP 293
>gi|440789800|gb|ELR11094.1| SWIB/MDM2 domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 424
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 34 VGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+G +R + VW Y++ N L DP ++ V CD+ L+ G +R ++L L+
Sbjct: 228 LGMHTDTRPKIVLGVWQYVRANRLHDPEDRRYVVCDEVLQEAF-GCTRFAASDLTRLVSE 286
Query: 94 HF-PKDP 99
H P DP
Sbjct: 287 HLSPADP 293
>gi|169601186|ref|XP_001794015.1| hypothetical protein SNOG_03451 [Phaeosphaeria nodorum SN15]
gi|160705881|gb|EAT88656.2| hypothetical protein SNOG_03451 [Phaeosphaeria nodorum SN15]
Length = 275
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
G +SR ++W Y+K +LQDP +K + CD +R++
Sbjct: 195 GGFHLSRPQTVKKIWEYVKQRDLQDPADKRQIRCDDAMRAVF 236
>gi|255581535|ref|XP_002531573.1| set domain protein, putative [Ricinus communis]
gi|223528803|gb|EEF30809.1| set domain protein, putative [Ricinus communis]
Length = 1058
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 50 SYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
Y+K NNL+DP K+ + CD +LR+ L G+ RV E+ L++ HF
Sbjct: 615 EYVKRNNLRDPRKKSQIICDSRLRN-LFGQPRVGHFEMLKLVENHF 659
>gi|168040973|ref|XP_001772967.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
gi|162675700|gb|EDQ62192.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
Length = 404
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L + +G SR VW YIK LQ+ + +++CD LR I G R++ A
Sbjct: 190 LSPALAQVLGVEVDSRTHICAAVWQYIKIKKLQNHVDPTMIDCDAALRRIF-GDERIKFA 248
Query: 86 ELPALIKLHF 95
+ A + H
Sbjct: 249 SISARLHQHL 258
>gi|28278760|gb|AAH45009.1| Smarcd1 protein, partial [Xenopus laevis]
Length = 481
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQDP+ + + CD+ L+ I + R++ +E+P L L P +P
Sbjct: 285 LWQYIKTHKLQDPHEREFIICDKYLQQIFESQ-RMKFSEIPQRLHALLMPPEP 336
>gi|331246146|ref|XP_003335707.1| hypothetical protein PGTG_17145 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309314697|gb|EFP91288.1| hypothetical protein PGTG_17145 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 287
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+N L +G SR ++W YIK N+LQ+P +K + CD+ L+ +
Sbjct: 201 LNCSPALSNVIGVPVCSRPQVVKKLWEYIKANSLQNPQDKRQIMCDEALKKVF 253
>gi|326432881|gb|EGD78451.1| hypothetical protein PTSG_09146 [Salpingoeca sp. ATCC 50818]
Length = 377
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L EF+G+ ++R R+W+YI+ NNL P K D KL S L G+ +
Sbjct: 238 LELAEPLAEFLGEKYMARSEVTKRIWAYIRENNL--PTKKGCRILDDKLSSAL-GRKTIS 294
Query: 84 LAELPALIK 92
LP +K
Sbjct: 295 FKTLPKALK 303
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+W+YIK N LQDP + + CD K++++
Sbjct: 331 LWAYIKENGLQDPRDGRRILCDDKMKAVF 359
>gi|21357829|ref|NP_647745.1| CG1240 [Drosophila melanogaster]
gi|7292276|gb|AAF47684.1| CG1240 [Drosophila melanogaster]
gi|16769634|gb|AAL29036.1| LD45195p [Drosophila melanogaster]
gi|220956410|gb|ACL90748.1| CG1240-PA [synthetic construct]
Length = 244
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K NL L +G+S + R +VW+ IK +L DP NK CD +L
Sbjct: 163 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMK 222
Query: 75 IL 76
++
Sbjct: 223 VM 224
>gi|449461655|ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Cucumis sativus]
Length = 1470
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK N L+DP K+ + CD +L S L GK RV E+ L++ HF
Sbjct: 444 YIKRNKLRDPRRKSQIICDSRLES-LFGKPRVGHFEMLKLLESHF 487
>gi|414591029|tpg|DAA41600.1| TPA: hypothetical protein ZEAMMB73_184002 [Zea mays]
Length = 532
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W YIK LQ+PN+ + CD +L+ + G+ +++ A
Sbjct: 317 LSQPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPNDPSFFMCDPQLKKVF-GEDKLKFA 375
Query: 86 ELPALIKLHFPKDP 99
L I H P
Sbjct: 376 MLSQRISQHLSAPP 389
>gi|425769869|gb|EKV08350.1| SWI-SNF complex subunit (BAF60b), putative [Penicillium digitatum
Pd1]
gi|425771447|gb|EKV09890.1| SWI-SNF complex subunit (BAF60b), putative [Penicillium digitatum
PHI26]
Length = 548
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K V CD +LRSI G+ ++
Sbjct: 326 LSKELAEVLDVEEETRSGIVLGIWDYIRAMELQEDEEKRQVRCDHRLRSIF-GREQMFFP 384
Query: 86 ELPALIKLHF-PKDP 99
++P + H P +P
Sbjct: 385 QIPESVGPHTSPMEP 399
>gi|365991387|ref|XP_003672522.1| hypothetical protein NDAI_0K00880 [Naumovozyma dairenensis CBS 421]
gi|343771298|emb|CCD27279.1| hypothetical protein NDAI_0K00880 [Naumovozyma dairenensis CBS 421]
Length = 266
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 35 GQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
G+ ++R +VW+YIK N LQ+PN++ + CD + I K
Sbjct: 195 GEKELARTQVVKQVWNYIKENKLQNPNDRREILCDSNMEPIFGKK 239
>gi|255935395|ref|XP_002558724.1| Pc13g02850 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583344|emb|CAP91354.1| Pc13g02850 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 494
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E + +R G + +W YI+ LQ+ K V CD +LRSI G+ ++
Sbjct: 272 LSKELAEVLDVEEETRSGIVLGIWDYIRAMELQEDEEKRQVRCDHRLRSIF-GREQMFFP 330
Query: 86 ELPALIKLHF-PKDP 99
++P + H P +P
Sbjct: 331 QIPESVGPHTSPMEP 345
>gi|110289394|gb|AAP54582.2| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 1706
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 28 STLREFVGQSR------ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
S L EF+G R IS+ + + Y+K NL+DP K+ + CD +L + L K
Sbjct: 374 SELLEFIGHMRNGDISYISQFDVQILLLEYVKQKNLRDPRRKSQIICDARLAN-LFRKPH 432
Query: 82 VELAELPALIKLHF 95
V E+ L+++HF
Sbjct: 433 VGHFEMLKLLEMHF 446
>gi|242046738|ref|XP_002461115.1| hypothetical protein SORBIDRAFT_02g041010 [Sorghum bicolor]
gi|241924492|gb|EER97636.1| hypothetical protein SORBIDRAFT_02g041010 [Sorghum bicolor]
Length = 503
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 13 NPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
NP+K L L E +G +R +W YIK LQ+PN+ + CD +L
Sbjct: 282 NPEKF-------KLSPPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPNDPSFFMCDPQL 334
Query: 73 RSILMGKSRVELAELPALIKLHFPKDP 99
+ + G+ +++ A L I H P
Sbjct: 335 KKVF-GEDKLKFAMLSQKISQHLTAPP 360
>gi|449515615|ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 19-like [Cucumis sativus]
Length = 1475
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK N L+DP K+ + CD +L S L GK RV E+ L++ HF
Sbjct: 444 YIKRNKLRDPRRKSQIICDSRLES-LFGKPRVGHFEMLKLLESHF 487
>gi|148229535|ref|NP_001090014.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 3 [Xenopus laevis]
gi|62739305|gb|AAH94087.1| MGC115001 protein [Xenopus laevis]
Length = 369
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L +G +R +W YIKTN LQD + K ++NC++ R I
Sbjct: 251 LARLLGVHTQTRANIMQALWLYIKTNKLQDSHEKELINCNRYFRQIF 297
>gi|389743867|gb|EIM85051.1| SWIB-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 271
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+++R ++W YIK N++Q+P NK + CD+K R++
Sbjct: 210 KMARPQVVKQLWVYIKANDMQNPANKKEIVCDEKFRAMF 248
>gi|367010370|ref|XP_003679686.1| hypothetical protein TDEL_0B03460 [Torulaspora delbrueckii]
gi|359747344|emb|CCE90475.1| hypothetical protein TDEL_0B03460 [Torulaspora delbrueckii]
Length = 219
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
V L L F+G++ + R VW YIK N+LQ+P ++ + C++++ I K
Sbjct: 117 VMLAEPLSNFLGETSLPRTQVVKLVWDYIKKNDLQNPQDRREILCNKEMEPIFGKK 172
>gi|38047929|gb|AAR09867.1| similar to Drosophila melanogaster CG1240, partial [Drosophila
yakuba]
Length = 133
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K NL L +G+S + R +VW+ IK +L DP NK CD +L
Sbjct: 52 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMK 111
Query: 75 IL 76
++
Sbjct: 112 VM 113
>gi|323456522|gb|EGB12389.1| hypothetical protein AURANDRAFT_61149 [Aureococcus anophagefferens]
Length = 1875
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + VG R + +W YIK ++LQ+P NKN + CD L++ K +V
Sbjct: 219 LSDAMAAVVGVGRANHFRLVKLLWKYIKKHDLQNPANKNEIVCDAALKAAFK-KDKVTSF 277
Query: 86 ELPALIKLHFPKD 98
+ L+ H ++
Sbjct: 278 GMSKLLSAHMHRE 290
>gi|168001062|ref|XP_001753234.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
gi|162695520|gb|EDQ81863.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
Length = 421
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L + +G +R VW YIKT LQ+P + ++NCD L+ + +++ A
Sbjct: 207 LSPALAQVLGVEVDTRPHVIAAVWQYIKTKKLQNPVDPTMINCDDALQKVF-DDEKIKFA 265
Query: 86 ELPALIKLH 94
+ A + H
Sbjct: 266 SISARLHQH 274
>gi|359843278|gb|AEV89774.1| nuclear protein [Schistocerca gregaria]
Length = 267
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
+L L +GQ + R ++W IK NL DP NK CD +L + G R +
Sbjct: 196 SLSPELAALMGQDSMPRHEVVKKIWGIIKERNLYDPKNKQFAICDDELMKVF-GVKRFRM 254
Query: 85 AELPALIKLHF 95
+ +K HF
Sbjct: 255 FGMMKYLKNHF 265
>gi|71991610|ref|NP_498159.2| Protein T24G10.2 [Caenorhabditis elegans]
gi|373219985|emb|CCD71519.1| Protein T24G10.2 [Caenorhabditis elegans]
Length = 347
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 20 LIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ L + + L++ + R +W YIK NNL+DP N + CD L SI
Sbjct: 196 MTKLCYISTELQQVTKDQWMKRCDVVKALWDYIKENNLKDPKNGQYIICDSTLESIF 252
>gi|387014380|gb|AFJ49309.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2-like [Crotalus
adamanteus]
Length = 456
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I SR+ +E+P
Sbjct: 242 LARLLGVHTQTRASIMQALWLYIKYNKLQDCHEKEYINCNRYFRQIF-NCSRMRFSEIP 299
>gi|242011317|ref|XP_002426399.1| 46 kDa FK506-binding nuclear protein, putative [Pediculus humanus
corporis]
gi|212510498|gb|EEB13661.1| 46 kDa FK506-binding nuclear protein, putative [Pediculus humanus
corporis]
Length = 258
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
NL L + VG+ + R ++W IK +L DP NK CD L ++ G R
Sbjct: 187 NLSPELAKLVGRDSMPRHEVVKKIWEIIKERDLYDPENKQYAICDNDLFKVI-GIKRFRA 245
Query: 85 AELPALIKLHF 95
+ +K HF
Sbjct: 246 FSMMKYLKNHF 256
>gi|356570147|ref|XP_003553252.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
Length = 478
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L LRE +G +R +W Y+K LQ PN+ + +CDQ L+ + G+ +V+
Sbjct: 265 LSPALREVLGVQVDTRARIVSAIWHYVKARKLQIPNDPSFFHCDQALQRVF-GEDKVKFT 323
Query: 86 ELPALIKLH-FP 96
+ I H FP
Sbjct: 324 MVSQKISQHLFP 335
>gi|195015029|ref|XP_001984125.1| GH16267 [Drosophila grimshawi]
gi|193897607|gb|EDV96473.1| GH16267 [Drosophila grimshawi]
Length = 254
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 13 NPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
P+K NL L +G + R +VW+ IK +L DP NK CD +L
Sbjct: 170 TPRKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDEL 229
Query: 73 RSIL 76
++
Sbjct: 230 MKVM 233
>gi|413952456|gb|AFW85105.1| hypothetical protein ZEAMMB73_878157 [Zea mays]
Length = 1704
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
+L+N + +R +S ISR + YIK N L+DP K+ + CD L+S L K R
Sbjct: 732 ELINFVAHVRNG-DKSVISRYDVQPLLLDYIKRNKLRDPRRKSQIICDSLLQS-LFAKER 789
Query: 82 VELAELPALIKLHF 95
V E+ L++ HF
Sbjct: 790 VGHFEMLKLLESHF 803
>gi|222613130|gb|EEE51262.1| hypothetical protein OsJ_32135 [Oryza sativa Japonica Group]
Length = 1766
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 28 STLREFVGQSR------ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
S L EF+G R IS+ + + Y+K NL+DP K+ + CD +L + L K
Sbjct: 374 SELLEFIGHMRNGDISYISQFDVQILLLEYVKQKNLRDPRRKSQIICDARLAN-LFRKPH 432
Query: 82 VELAELPALIKLHF 95
V E+ L+++HF
Sbjct: 433 VGHFEMLKLLEMHF 446
>gi|409043267|gb|EKM52750.1| hypothetical protein PHACADRAFT_100439 [Phanerochaete carnosa
HHB-10118-sp]
Length = 384
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 12 DNPKKLANLIDLVNLPSTLR------EFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K+ +I L P R +G +R+G +W+YIK +LQD ++ +
Sbjct: 144 DVPLKIRVIIHLEQQPEVFRVHPDLGNILGIKEDTRVGIVQALWNYIKLQDLQDKVDRRL 203
Query: 66 VNCDQKLRSILMGKSRVELAELPALIKLHFPK-DP 99
+ D +LR I G ++ ++P + K DP
Sbjct: 204 IRADAQLRGIF-GADAIQFQQIPERVNRFLGKADP 237
>gi|194865200|ref|XP_001971311.1| GG14886 [Drosophila erecta]
gi|190653094|gb|EDV50337.1| GG14886 [Drosophila erecta]
Length = 244
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K NL L +G+S + R +VW+ IK +L DP NK CD +L
Sbjct: 163 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMK 222
Query: 75 IL 76
++
Sbjct: 223 VM 224
>gi|357154373|ref|XP_003576761.1| PREDICTED: uncharacterized protein LOC100835763 [Brachypodium
distachyon]
Length = 1800
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
+ YIK NL+DP K+ + CD L+S L GK RV E+ L++ HF
Sbjct: 755 ILEYIKRENLRDPRRKSQIVCDPLLQS-LFGKERVGHFEMLKLLESHF 801
>gi|357483665|ref|XP_003612119.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355513454|gb|AES95077.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 1255
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
Y+K NNL+DP K+++ CD +L + L GK+R+ E+ L++ HF
Sbjct: 335 YVKKNNLRDPQQKSLIVCDSRLVN-LFGKARLGYIEMLMLLEPHF 378
>gi|302508119|ref|XP_003016020.1| hypothetical protein ARB_05417 [Arthroderma benhamiae CBS 112371]
gi|291179589|gb|EFE35375.1| hypothetical protein ARB_05417 [Arthroderma benhamiae CBS 112371]
Length = 540
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+R G +W Y+K LQ+ K + CD +LR++ SR L + LIK+
Sbjct: 311 TRAGIVAGIWEYVKAMGLQENEEKRTIQCDDRLRAVSWNSSRYYLFKCEKLIKM 364
>gi|341883933|gb|EGT39868.1| hypothetical protein CAEBREN_00740 [Caenorhabditis brenneri]
Length = 371
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 12 DNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQK 71
DN K + L + L++ + R +W YI N+L+DP NK + CD
Sbjct: 181 DNSGKFGPMTKLCYISPELQQVTKDQWMKRCDVVKVLWEYINENDLKDPKNKQFIICDDI 240
Query: 72 LRSIL 76
L+SI
Sbjct: 241 LQSIF 245
>gi|224080436|ref|XP_002306135.1| predicted protein [Populus trichocarpa]
gi|222849099|gb|EEE86646.1| predicted protein [Populus trichocarpa]
Length = 393
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK N L+DP K+ + CD +L + L GK RV E+ L++ HF
Sbjct: 189 YIKRNKLRDPRRKSQIICDSRLEN-LFGKPRVGHFEMLKLLESHF 232
>gi|6091729|gb|AAF03441.1|AC010797_17 unknown protein [Arabidopsis thaliana]
gi|6513942|gb|AAF14846.1|AC011664_28 unknown protein [Arabidopsis thaliana]
Length = 442
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L + +G +R +W Y+K LQ+PN+ + NCD L S+ G+ +++ L
Sbjct: 255 ALMQVLGIEVDTRPRIIAAIWHYVKVRKLQNPNDPSFFNCDAALHSVF-GEEKMKFTMLS 313
Query: 89 ALIKLHFPKDP 99
I H P
Sbjct: 314 HKISQHLSPPP 324
>gi|301119559|ref|XP_002907507.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106019|gb|EEY64071.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
++L L + VG ++R +W+YI+ ++LQDPNNK + D LR + +
Sbjct: 144 LSLSPELAQVVGAETMARPQVVKALWAYIREHDLQDPNNKKNILLDDTLRGVFQ-RDSFT 202
Query: 84 LAELPALIKLHFPK 97
+ + +K H K
Sbjct: 203 MFSMNKFVKRHVRK 216
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
++L L G R++R +W+YI +NLQDP++K + D +++ + +
Sbjct: 276 LSLSPELASLTGSDRMARPQIVKALWAYIHEHNLQDPDDKRSILLDDRMKQVFQ-RDSFT 334
Query: 84 LAELPALIKLHFPK 97
+ + IK H K
Sbjct: 335 MFSMNKFIKRHARK 348
>gi|26453080|dbj|BAC43616.1| unknown protein [Arabidopsis thaliana]
Length = 458
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L + +G +R +W Y+K LQ+PN+ + NCD L S+ G+ +++ L
Sbjct: 255 ALMQVLGIEVDTRPRIIAAIWHYVKVRKLQNPNDPSFFNCDAALHSVF-GEEKMKFTMLS 313
Query: 89 ALIKLHFPKDP 99
I H P
Sbjct: 314 HKISQHLSPPP 324
>gi|224097122|ref|XP_002310841.1| predicted protein [Populus trichocarpa]
gi|222853744|gb|EEE91291.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK N+L+DP+ K+ + CD +L L GK RV E+ L++ HF
Sbjct: 283 YIKRNDLRDPHQKSHIFCDSRLIK-LFGKERVGHFEMLKLLEYHF 326
>gi|30678449|ref|NP_566154.2| SWI/SNF-related matrix-associated actin-dependent regulator of
[Arabidopsis thaliana]
gi|109946633|gb|ABG48495.1| At3g01890 [Arabidopsis thaliana]
gi|332640209|gb|AEE73730.1| SWI/SNF-related matrix-associated actin-dependent regulator of
[Arabidopsis thaliana]
Length = 458
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 29 TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L + +G +R +W Y+K LQ+PN+ + NCD L S+ G+ +++ L
Sbjct: 255 ALMQVLGIEVDTRPRIIAAIWHYVKVRKLQNPNDPSFFNCDAALHSVF-GEEKMKFTMLS 313
Query: 89 ALIKLHFPKDP 99
I H P
Sbjct: 314 HKISQHLSPPP 324
>gi|427786519|gb|JAA58711.1| Putative rna polymerase i transcription factor uaf [Rhipicephalus
pulchellus]
Length = 221
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L VG ++R ++WS ++ NL DP+NK CD +L + G RV +
Sbjct: 149 LSPELAAVVGAEEMARSAVVKKMWSIVRERNLFDPSNKQFALCDPQLMKVF-GHKRVRMF 207
Query: 86 ELPALIKLHF 95
+ +K H
Sbjct: 208 GMMKYLKNHI 217
>gi|195492893|ref|XP_002094186.1| GE20337 [Drosophila yakuba]
gi|194180287|gb|EDW93898.1| GE20337 [Drosophila yakuba]
Length = 244
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K NL L +G+S + R +VW+ IK +L DP NK CD +L
Sbjct: 163 RKSTGFTRAYNLSPELSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMK 222
Query: 75 IL 76
++
Sbjct: 223 VM 224
>gi|147766681|emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
Length = 548
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L E +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 335 LSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFNCDPPLQKVF-GEDKMKFT 393
Query: 86 ELPALIKLHF 95
+ I H
Sbjct: 394 MVSQKISQHL 403
>gi|225451428|ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
Length = 548
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L E +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 335 LSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFNCDPPLQKVF-GEDKMKFT 393
Query: 86 ELPALIKLHF 95
+ I H
Sbjct: 394 MVSQKISQHL 403
>gi|296082354|emb|CBI21359.3| unnamed protein product [Vitis vinifera]
Length = 477
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L E +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 264 LSSALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFNCDPPLQKVF-GEDKMKFT 322
Query: 86 ELPALIKLHF 95
+ I H
Sbjct: 323 MVSQKISQHL 332
>gi|15618678|ref|NP_224964.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
pneumoniae CWL029]
gi|15836302|ref|NP_300826.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
pneumoniae J138]
gi|16752272|ref|NP_445640.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
pneumoniae AR39]
gi|33242128|ref|NP_877069.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydophila
pneumoniae TW-183]
gi|4377077|gb|AAD18907.1| DNA Topoisomerase I-Fused to SWI Domain [Chlamydophila pneumoniae
CWL029]
gi|7190015|gb|AAF38871.1| DNA topoisomerase I [Chlamydophila pneumoniae AR39]
gi|8979142|dbj|BAA98977.1| DNA topoisomerase I-fused to SWI domain [Chlamydophila pneumoniae
J138]
gi|33236638|gb|AAP98726.1| DNA topoisomerase I [Chlamydophila pneumoniae TW-183]
Length = 871
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 26 LPS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
LPS L + +G +SR ++W YIK + LQ P NK ++ D L +I+ G + +++
Sbjct: 790 LPSPDLAKMIGNEPVSRGEATKKIWDYIKEHQLQAPENKKLLVPDNNLATII-GPNPIDM 848
Query: 85 AELPALIKLHFPK 97
+L + H K
Sbjct: 849 FQLSKHLSQHLTK 861
>gi|340379605|ref|XP_003388317.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like
[Amphimedon queenslandica]
Length = 475
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
+ S L + +G +++ +W YIK N LQDP + +N D+ + I R++
Sbjct: 258 VSSKLAKLLGIHTATKVDIVNGIWQYIKNNRLQDPQEREFINNDKYFQQIF-EVPRMKFT 316
Query: 86 ELPA-LIKLHFPKDP 99
E+P L L F DP
Sbjct: 317 EIPKRLGALLFAPDP 331
>gi|384450061|ref|YP_005662663.1| DNA topoisomerase I [Chlamydophila pneumoniae LPCoLN]
gi|269302557|gb|ACZ32657.1| DNA topoisomerase I [Chlamydophila pneumoniae LPCoLN]
Length = 871
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 26 LPS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVEL 84
LPS L + +G +SR ++W YIK + LQ P NK ++ D L +I+ G + +++
Sbjct: 790 LPSPDLAKMIGNEPVSRGEATKKIWDYIKEHQLQAPENKKLLVPDNNLATII-GPNPIDM 848
Query: 85 AELPALIKLHFPK 97
+L + H K
Sbjct: 849 FQLSKHLSQHLTK 861
>gi|356571363|ref|XP_003553847.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
Length = 543
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W Y+K LQ+PN+ + +CDQ L + G+ +++
Sbjct: 330 LSPALTEVLGIEVDTRPRIVAAIWHYVKARKLQNPNDPSYFHCDQPLLKVF-GEEKMKFT 388
Query: 86 ELPALIKLH-FPKDP 99
+ I H FP P
Sbjct: 389 MVSQKISSHLFPPQP 403
>gi|125830656|ref|XP_692749.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 [Danio
rerio]
Length = 501
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I G R+ +++P
Sbjct: 287 LARLLGVHTQTRASIMQALWLYIKNNKLQDCHEKEYINCNRYFRQIF-GCPRMRFSDIP 344
>gi|452985259|gb|EME85016.1| hypothetical protein MYCFIDRAFT_195906 [Pseudocercospora fijiensis
CIRAD86]
Length = 400
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
+NL L +G++++SR ++W Y+K +LQ+P +K + CD +
Sbjct: 343 MNLSEPLSALLGETQLSRPQTVKKIWGYVKERDLQNPKDKRQIMCDNDI 391
>gi|302306522|ref|NP_982932.2| ABL015Cp [Ashbya gossypii ATCC 10895]
gi|299788556|gb|AAS50756.2| ABL015Cp [Ashbya gossypii ATCC 10895]
gi|374106135|gb|AEY95045.1| FABL015Cp [Ashbya gossypii FDAG1]
Length = 204
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGK 79
V L L+ +G+ ++ R VW YIK + LQ+P+++ + CD + + K
Sbjct: 111 VQLSEPLQRLLGEEQLPRTQVVKAVWDYIKQHQLQNPDDRREILCDAAMEPVFGKK 166
>gi|74141650|dbj|BAE38583.1| unnamed protein product [Mus musculus]
Length = 255
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + + +NC++ R I R+ +E+P
Sbjct: 41 LARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFSEIP 98
>gi|346464533|gb|AEO32111.1| hypothetical protein [Amblyomma maculatum]
Length = 211
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L VG +++R ++WS ++ NL DP+N+ CD +L + G+ RV +
Sbjct: 139 LSAELAAVVGAEQMARSDVVKKMWSIVRERNLFDPSNRQFALCDPQLLKVF-GQKRVRMF 197
Query: 86 ELPALIKLHF 95
+ +K H
Sbjct: 198 GMMKYLKNHI 207
>gi|148224014|ref|NP_001087810.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Xenopus laevis]
gi|51703961|gb|AAH81255.1| MGC86299 protein [Xenopus laevis]
Length = 465
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIKTN LQD + K +NC++ R I R++ ++LP
Sbjct: 251 LARLLGVHTQTRANIMQALWLYIKTNKLQDSHEKEHINCNRYFRQIF-NCLRMKFSDLP 308
>gi|225678200|gb|EEH16484.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 227
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 24 VNLPSTLREFVG---QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ L TL +G +++SR +VW YI+ +LQDP ++ + CD +R++
Sbjct: 149 LTLSPTLSALLGGEITTKLSRPQTVKKVWQYIREKDLQDPADRRQIRCDGLMRAVF 204
>gi|330841138|ref|XP_003292560.1| hypothetical protein DICPUDRAFT_83174 [Dictyostelium purpureum]
gi|325077180|gb|EGC30910.1| hypothetical protein DICPUDRAFT_83174 [Dictyostelium purpureum]
Length = 453
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 46 MRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF-PKDP 99
+ +W YIK+N L DP+ K + CD+ L++I ++ ++P L++ H P DP
Sbjct: 256 LALWHYIKSNTLLDPDTKKIT-CDENLKNIF-NLDELQFNQIPQLLREHLSPPDP 308
>gi|344243068|gb|EGV99171.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2 [Cricetulus griseus]
Length = 450
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + + +NC++ R I R+ +E+P
Sbjct: 236 LARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFSEIP 293
>gi|347964748|ref|XP_309104.5| AGAP000923-PA [Anopheles gambiae str. PEST]
gi|333466461|gb|EAA04969.5| AGAP000923-PA [Anopheles gambiae str. PEST]
Length = 507
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + + CD+ L I + R++ AE+P L L P DP
Sbjct: 301 LWQYIKTHRLQDAHEREYIVCDKYLEQIFACQ-RMKFAEIPQRLNPLLHPPDP 352
>gi|357467443|ref|XP_003604006.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula]
gi|355493054|gb|AES74257.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula]
Length = 1942
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK N L+DP K+ + CD +L++ L GK RV E+ L++ HF
Sbjct: 941 YIKINKLRDPRRKSQIVCDARLQN-LFGKPRVGHFEMLKLLESHF 984
>gi|240254462|ref|NP_179241.4| DNA binding / nucleic acid binding / protein binding / zinc ion
binding protein [Arabidopsis thaliana]
gi|391358194|sp|Q9SIV5.3|C3H19_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 19;
Short=AtC3H19; AltName: Full=Protein Needed for
RDR2-independent DNA methylation
gi|330251407|gb|AEC06501.1| DNA binding / nucleic acid binding / protein binding / zinc ion
binding protein [Arabidopsis thaliana]
Length = 1773
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 50 SYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+YIK NL+DP K+ V CD +L++ L GKS V E+ L+ HF K
Sbjct: 838 AYIKRYNLRDPRRKSQVICDSRLQN-LFGKSHVGHFEMLNLLDSHFLK 884
>gi|295662533|ref|XP_002791820.1| SWIB/MDM2 domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279472|gb|EEH35038.1| SWIB/MDM2 domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 227
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 24 VNLPSTLREFVG---QSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ L TL +G +++SR +VW YI+ +LQDP ++ + CD +R++
Sbjct: 149 LTLSPTLSALLGGEITTKLSRPQTVKKVWQYIREKDLQDPADRRQIRCDGLMRAVF 204
>gi|354479433|ref|XP_003501914.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 [Cricetulus
griseus]
Length = 456
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + + +NC++ R I R+ +E+P
Sbjct: 242 LARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFSEIP 299
>gi|440890859|gb|ELR44942.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2, partial [Bos grunniens
mutus]
Length = 473
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + + +NC++ R I R+ +E+P
Sbjct: 259 LARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFSEIP 316
>gi|13543110|gb|AAH05732.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Mus musculus]
Length = 456
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + + +NC++ R I R+ +E+P
Sbjct: 242 LARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFSEIP 299
>gi|291235390|ref|XP_002737629.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 317
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E VG +R++R R+W I+ L DP NK + CD++L +
Sbjct: 180 LSHELAEIVGTNRMARHDVVKRMWEIIRERKLMDPKNKQFMLCDEQLLKVF 230
>gi|332372530|gb|AEE61407.1| unknown [Dendroctonus ponderosae]
Length = 500
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIKT+ LQD + + + CD+ L I S+++ AE+P L L P DP
Sbjct: 303 LWQYIKTHKLQDSHEREFIVCDKYLEQIF-NCSKMKFAEIPQRLNPLLHPPDP 354
>gi|297836700|ref|XP_002886232.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332072|gb|EFH62491.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 383
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 20 LIDLV-NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMG 78
L+DLV ++ R F+ + + L + +YIK NL+DP K+ V CD +L++ L G
Sbjct: 150 LLDLVVHMRRGDRSFLPMTEVQTL-----LLAYIKRYNLRDPRRKSQVICDSRLQN-LFG 203
Query: 79 KSRVELAELPALIKLHFPK 97
KS V E+ L+ HF K
Sbjct: 204 KSHVGHFEMLNLLDSHFLK 222
>gi|260787721|ref|XP_002588900.1| hypothetical protein BRAFLDRAFT_89088 [Branchiostoma floridae]
gi|229274072|gb|EEN44911.1| hypothetical protein BRAFLDRAFT_89088 [Branchiostoma floridae]
Length = 440
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
+W YIKT+ LQD + + +NCD+ L+ I + R++ +E+P
Sbjct: 244 LWQYIKTHKLQDAHEREYINCDRYLQQIFECQ-RMKFSEIP 283
>gi|417402383|gb|JAA48041.1| Putative swi/snf transcription activation complex subunit [Desmodus
rotundus]
Length = 531
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + + +NC++ R I R+ +E+P
Sbjct: 317 LARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFSEIP 374
>gi|355720719|gb|AES07025.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Mustela putorius furo]
Length = 387
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + + +NC++ R I R+ +E+P
Sbjct: 182 LARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFSEIP 239
>gi|71017749|ref|XP_759105.1| hypothetical protein UM02958.1 [Ustilago maydis 521]
gi|46098897|gb|EAK84130.1| hypothetical protein UM02958.1 [Ustilago maydis 521]
Length = 846
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF-PKD 98
SR G +WSY+K L D ++ V CD LRS L + +P ++ H P
Sbjct: 620 SRAGVISALWSYVKEKKLLDETDRKKVKCDSALRS-LFNTDTINFHHMPEVVNRHLHPAQ 678
Query: 99 P 99
P
Sbjct: 679 P 679
>gi|402595065|gb|EJW88991.1| brahma associated protein 60kD [Wuchereria bancrofti]
Length = 459
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + +G + +R +W YIKT+ LQD ++ +NCD L I G R+ E+P
Sbjct: 245 LGKVLGMATETRPKIIEALWQYIKTHKLQDQAERDNINCDCYLEQIF-GVKRMRFMEIPQ 303
Query: 90 LIK--LHFPKDP 99
++ LH P DP
Sbjct: 304 RLQNLLHQP-DP 314
>gi|328699397|ref|XP_001947263.2| PREDICTED: upstream activation factor subunit spp27-like
[Acyrthosiphon pisum]
Length = 258
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
V L L +G + R ++W+ IK NL DP+NK CD L ++ G R
Sbjct: 186 VALSPELASLMGSEALPRHEVVKKMWAIIKERNLYDPSNKQYAICDDDLMKVI-GVKRFR 244
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 245 TFGMMKFLKNHF 256
>gi|391870930|gb|EIT80099.1| hypothetical protein Ao3042_03411 [Aspergillus oryzae 3.042]
Length = 305
Score = 38.9 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 26/39 (66%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++SR +VW+YI+ + LQDP ++ + CD+ +R++
Sbjct: 244 QLSRPQTVKKVWAYIREHELQDPTDRRQIRCDEPMRAVF 282
>gi|224103325|ref|XP_002313011.1| predicted protein [Populus trichocarpa]
gi|222849419|gb|EEE86966.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK N L+DP+ K+ + CD +L + L GK RV E+ L++ H+
Sbjct: 196 YIKRNKLRDPHRKSQIICDSRLEN-LFGKPRVGHFEMLKLLESHY 239
>gi|348560349|ref|XP_003465976.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily D
member 2-like [Cavia porcellus]
Length = 533
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + + +NC++ R I R+ +E+P
Sbjct: 319 LARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFSEIP 376
>gi|308485070|ref|XP_003104734.1| hypothetical protein CRE_24020 [Caenorhabditis remanei]
gi|308257432|gb|EFP01385.1| hypothetical protein CRE_24020 [Caenorhabditis remanei]
Length = 444
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 12 DNPKKLANLIDLVNLP------STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K L+ L N+P L + +G + +R +W YI+T+ LQD + +
Sbjct: 205 DRPVKCRILLLLDNIPLKFKLHPRLAKVLGIAADTRPKIIEALWHYIRTHGLQDNQDHDY 264
Query: 66 VNCDQKLRSILMGKSRVELAELPALIKLH 94
+NCD L+ G +R+ E+P KLH
Sbjct: 265 INCDAFLKQCF-GVNRLRFMEVPN--KLH 290
>gi|260783506|ref|XP_002586815.1| hypothetical protein BRAFLDRAFT_247762 [Branchiostoma floridae]
gi|229271942|gb|EEN42826.1| hypothetical protein BRAFLDRAFT_247762 [Branchiostoma floridae]
Length = 393
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
+W YIKT+ LQD + + +NCD+ L+ I + R++ +E+P
Sbjct: 197 LWQYIKTHKLQDAHEREYINCDRYLQQIFECQ-RMKFSEIP 236
>gi|226287699|gb|EEH43212.1| SWIB/MDM2 domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 275
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
DL + R +++SR +VW YI+ +LQDP ++ + CD +R++
Sbjct: 198 DLESKKEVTRTGGFHTKLSRPQTVKKVWQYIREKDLQDPADRRQIRCDGLMRAVF 252
>gi|113931632|ref|NP_001039267.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Xenopus (Silurana)
tropicalis]
gi|89273393|emb|CAJ81665.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Xenopus (Silurana)
tropicalis]
Length = 480
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L +G +R +W YIKTN LQD + K +NC++ R I
Sbjct: 266 LARLLGVHTQTRANIMQALWLYIKTNKLQDSHEKEHINCNRYFRQIF 312
>gi|255083979|ref|XP_002508564.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
gi|226523841|gb|ACO69822.1| animal specific-mbd4, 5 and 6 [Micromonas sp. RCC299]
Length = 288
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 28 STLREFVGQSR-ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ L +F+G + ISR ++WSY K NL DP NK + D+ L +L
Sbjct: 217 AALTKFLGGDKTISRATLTSKMWSYFKEKNLMDPENKRWIIADKPLSDLL 266
>gi|168056329|ref|XP_001780173.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
gi|162668406|gb|EDQ55014.1| SWI/SNF transcription activation complex subunit [Physcomitrella
patens subsp. patens]
Length = 473
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 22 DLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
D L + L + +G +R +W YIK LQ+ + ++NCD L+ +L G +
Sbjct: 255 DRFKLSAPLAQLLGVEVDTRPHIISALWQYIKAKKLQNSADPTMINCDPALQKVL-GDEK 313
Query: 82 VELAELPALIKLHF 95
++ A + A + H
Sbjct: 314 IKFASISARLHNHL 327
>gi|343429786|emb|CBQ73358.1| related to SWI/SNF related, matrix associated, actin dependent
regulator of chromatin subfamily D member 1 [Sporisorium
reilianum SRZ2]
Length = 916
Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF-PKD 98
SR G +WSY+K L D ++ V CD LRS L + +P ++ H P
Sbjct: 690 SRAGVISALWSYVKEKKLLDETDRKKVKCDAALRS-LFNTETINFHHMPEVVNRHLHPAQ 748
Query: 99 P 99
P
Sbjct: 749 P 749
>gi|4544383|gb|AAD22293.1| hypothetical protein [Arabidopsis thaliana]
Length = 383
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 50 SYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPK 97
+YIK NL+DP K+ V CD +L++ L GKS V E+ L+ HF K
Sbjct: 176 AYIKRYNLRDPRRKSQVICDSRLQN-LFGKSHVGHFEMLNLLDSHFLK 222
>gi|345490916|ref|XP_001607941.2| PREDICTED: upstream activation factor subunit spp27-like [Nasonia
vitripennis]
Length = 265
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
+ L L VG ++ R ++WS IK L DP NK CD L ++ G R
Sbjct: 193 ITLSPELAALVGAKQMPRYEVVKKLWSIIKERKLYDPKNKQFAICDDDLFKVI-GVKRFR 251
Query: 84 LAELPALIKLHF 95
+ +K HF
Sbjct: 252 TFGMMKYLKDHF 263
>gi|170097958|ref|XP_001880198.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644636|gb|EDR08885.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 272
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
++SR ++W YIK N LQ+P NK + CD L+++ G ++++ ++ ++ H
Sbjct: 211 KLSRPQVVKQLWVYIKGNELQNPENKREIMCDVNLKAVF-GVDKIDMFKMNKVLGQHL 267
>gi|449455860|ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis
sativus]
gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis
sativus]
Length = 547
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W Y+K LQ+PN+ + +CD L+ + G+ +++
Sbjct: 334 LSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFHCDPPLQKVF-GEDKLKFT 392
Query: 86 ELPALIKLH-FPKDP 99
+ I H FP P
Sbjct: 393 MVSQRISQHLFPPQP 407
>gi|255540265|ref|XP_002511197.1| brg-1 associated factor, putative [Ricinus communis]
gi|223550312|gb|EEF51799.1| brg-1 associated factor, putative [Ricinus communis]
Length = 529
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L +L E +G +R + +W Y+K+ LQ PN+ + CD L+ L G+ +V+ A
Sbjct: 317 LSPSLSEILGIEVETRPKILVAIWHYVKSKRLQIPNDPSFFMCDPPLKK-LFGEEKVKFA 375
Query: 86 ELPALIKLHF 95
+ I H
Sbjct: 376 MVSQKISQHL 385
>gi|170061397|ref|XP_001866216.1| BAF60b [Culex quinquefasciatus]
gi|167879643|gb|EDS43026.1| BAF60b [Culex quinquefasciatus]
Length = 184
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 42 LGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIK--LHFPKDP 99
L C +W Y KTN LQD + + + CD+ L I + R+++A +P I LH P DP
Sbjct: 100 LVCPSALWQYSKTNKLQDSHVREYITCDKYLEQIFSCQ-RMKIAVIPQRINPLLH-PPDP 157
>gi|363743394|ref|XP_425835.3| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 [Gallus
gallus]
Length = 474
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I R+ +E+P
Sbjct: 260 LARLLGVHTQTRASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIF-NCVRMRFSEIP 317
>gi|366991355|ref|XP_003675443.1| hypothetical protein NCAS_0C00860 [Naumovozyma castellii CBS 4309]
gi|342301308|emb|CCC69076.1| hypothetical protein NCAS_0C00860 [Naumovozyma castellii CBS 4309]
Length = 227
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQ 70
L L++ +G+ + R VWSYIK +NLQ+P+++ + D+
Sbjct: 149 LSEPLQQLIGEKELPRTQVVKMVWSYIKEHNLQNPSDRREIISDE 193
>gi|345293015|gb|AEN82999.1| AT5G14170-like protein, partial [Capsella rubella]
gi|345293017|gb|AEN83000.1| AT5G14170-like protein, partial [Capsella rubella]
gi|345293019|gb|AEN83001.1| AT5G14170-like protein, partial [Capsella rubella]
gi|345293021|gb|AEN83002.1| AT5G14170-like protein, partial [Capsella rubella]
gi|345293023|gb|AEN83003.1| AT5G14170-like protein, partial [Capsella rubella]
gi|345293025|gb|AEN83004.1| AT5G14170-like protein, partial [Capsella rubella]
gi|345293027|gb|AEN83005.1| AT5G14170-like protein, partial [Capsella rubella]
gi|345293029|gb|AEN83006.1| AT5G14170-like protein, partial [Capsella rubella]
Length = 175
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L + +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 33 LSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVF-GEEKLKFT 91
Query: 86 ELPALIKLHFPKDP 99
+ I H P
Sbjct: 92 MVSQKISHHLSPPP 105
>gi|291243077|ref|XP_002741433.1| PREDICTED: SWI/SNF related, matrix associated, actin dependent
regulator of chromatin, subfamily d, member 1-like
[Saccoglossus kowalevskii]
Length = 467
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L +G +R +W YIKT+ LQD N + +N D+ + I R++ +
Sbjct: 248 LDSRLARLLGVHTQTRPVIINALWQYIKTHKLQDTNEREFINNDRYFQQIFEC-HRMKFS 306
Query: 86 ELPA-LIKLHFPKDP 99
E+P L L P DP
Sbjct: 307 EIPQRLHPLLHPPDP 321
>gi|302808999|ref|XP_002986193.1| hypothetical protein SELMODRAFT_49450 [Selaginella
moellendorffii]
gi|300146052|gb|EFJ12724.1| hypothetical protein SELMODRAFT_49450 [Selaginella
moellendorffii]
Length = 71
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L VG + R +W+YI+ +NLQ P +K + CD+ L+ +
Sbjct: 20 QLSDVLEAIVGIPQAPRSQVVKSLWAYIREHNLQVPEDKRKIKCDEALKKVF 71
>gi|255311467|ref|ZP_05354037.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 6276]
gi|255317768|ref|ZP_05359014.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 6276s]
Length = 857
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK LQ P NK ++ D KL+ ++ G +++ L
Sbjct: 787 AALAAVIGTDPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVI-GADPIDMFAL 845
Query: 88 PALIKLHFPKD 98
+ H K+
Sbjct: 846 SKKLSAHLIKE 856
>gi|166154859|ref|YP_001653114.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|165930847|emb|CAP06409.1| DNA topoisomerase I [Chlamydia trachomatis L2b/UCH-1/proctitis]
gi|440526456|emb|CCP51940.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/8200/07]
gi|440536281|emb|CCP61794.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/795]
gi|440542509|emb|CCP68023.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/UCH-2]
gi|440543400|emb|CCP68914.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada2]
gi|440544291|emb|CCP69805.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/LST]
gi|440545181|emb|CCP70695.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams1]
gi|440546071|emb|CCP71585.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/CV204]
gi|440914333|emb|CCP90750.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams2]
gi|440915223|emb|CCP91640.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams3]
gi|440916115|emb|CCP92532.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Canada1]
gi|440917009|emb|CCP93426.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams4]
gi|440917899|emb|CCP94316.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2b/Ams5]
Length = 857
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK LQ P NK ++ D KL+ ++ G +++ L
Sbjct: 787 AALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVI-GADPIDMFAL 845
Query: 88 PALIKLHFPKD 98
+ H K+
Sbjct: 846 SKKLSAHLIKE 856
>gi|295830753|gb|ADG39045.1| AT5G14170-like protein [Capsella grandiflora]
gi|295830757|gb|ADG39047.1| AT5G14170-like protein [Neslia paniculata]
Length = 172
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L + +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 30 LSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVF-GEEKLKFT 88
Query: 86 ELPALIKLHFPKDP 99
+ I H P
Sbjct: 89 MVSQKISHHLSPPP 102
>gi|295830751|gb|ADG39044.1| AT5G14170-like protein [Capsella grandiflora]
gi|295830755|gb|ADG39046.1| AT5G14170-like protein [Capsella grandiflora]
Length = 172
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L + +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 30 LSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVF-GEEKLKFT 88
Query: 86 ELPALIKLHFPKDP 99
+ I H P
Sbjct: 89 MVSQKISHHLSPPP 102
>gi|295830747|gb|ADG39042.1| AT5G14170-like protein [Capsella grandiflora]
gi|295830749|gb|ADG39043.1| AT5G14170-like protein [Capsella grandiflora]
Length = 172
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L + +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 30 LSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVF-GEEKLKFT 88
Query: 86 ELPALIKLHFPKDP 99
+ I H P
Sbjct: 89 MVSQKISHHLSPPP 102
>gi|326933961|ref|XP_003213066.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2-like,
partial [Meleagris gallopavo]
Length = 484
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I R+ +E+P
Sbjct: 270 LARLLGVHTQTRASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIF-NCVRMRFSEIP 327
>gi|440533605|emb|CCP59115.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534499|emb|CCP60009.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis Ia/SotonIa3]
Length = 857
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK LQ P NK ++ D KL+ ++ G +++ L
Sbjct: 787 AALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVI-GADPIDMFAL 845
Query: 88 PALIKLHFPKD 98
+ H K+
Sbjct: 846 SKKLSAHLIKE 856
>gi|440529137|emb|CCP54621.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD6]
Length = 857
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK LQ P NK ++ D KL+ ++ G +++ L
Sbjct: 787 AALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVI-GADPIDMFAL 845
Query: 88 PALIKLHFPKD 98
+ H K+
Sbjct: 846 SKKLSAHLIKE 856
>gi|255349029|ref|ZP_05381036.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 70]
gi|255503567|ref|ZP_05381957.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 70s]
gi|255507247|ref|ZP_05382886.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D(s)2923]
gi|385242030|ref|YP_005809870.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/11023]
gi|385245638|ref|YP_005814461.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/150]
gi|386262998|ref|YP_005816277.1| DNA topoisomerase I [Chlamydia trachomatis Sweden2]
gi|389858337|ref|YP_006360579.1| DNA topoisomerase I [Chlamydia trachomatis F/SW4]
gi|389859213|ref|YP_006361454.1| DNA topoisomerase I [Chlamydia trachomatis E/SW3]
gi|389860089|ref|YP_006362329.1| DNA topoisomerase I [Chlamydia trachomatis F/SW5]
gi|289525686|emb|CBJ15167.1| DNA topoisomerase I [Chlamydia trachomatis Sweden2]
gi|296435254|gb|ADH17432.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/150]
gi|296438973|gb|ADH21126.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/11023]
gi|380249409|emb|CCE14705.1| DNA topoisomerase I [Chlamydia trachomatis F/SW5]
gi|380250284|emb|CCE13816.1| DNA topoisomerase I [Chlamydia trachomatis F/SW4]
gi|380251162|emb|CCE12927.1| DNA topoisomerase I [Chlamydia trachomatis E/SW3]
gi|440527354|emb|CCP52838.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD1]
gi|440530027|emb|CCP55511.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE4]
gi|440530926|emb|CCP56410.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/SotonE8]
gi|440531817|emb|CCP57327.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis F/SotonF3]
gi|440535394|emb|CCP60904.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis E/Bour]
Length = 857
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK LQ P NK ++ D KL+ ++ G +++ L
Sbjct: 787 AALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVI-GADPIDMFAL 845
Query: 88 PALIKLHFPKD 98
+ H K+
Sbjct: 846 SKKLSAHLIKE 856
>gi|166153984|ref|YP_001654102.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis 434/Bu]
gi|301335181|ref|ZP_07223425.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2tet1]
gi|339625384|ref|YP_004716863.1| DNA topoisomerase I [Chlamydia trachomatis L2c]
gi|165929972|emb|CAP03455.1| DNA topoisomerase I [Chlamydia trachomatis 434/Bu]
gi|339460716|gb|AEJ77219.1| DNA topoisomerase I [Chlamydia trachomatis L2c]
gi|440537174|emb|CCP62688.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/440/LN]
gi|440538063|emb|CCP63577.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/1322/p2]
gi|440538953|emb|CCP64467.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/115]
gi|440539842|emb|CCP65356.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L1/224]
gi|440540734|emb|CCP66248.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L2/25667R]
gi|440541622|emb|CCP67136.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis L3/404/LN]
Length = 857
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK LQ P NK ++ D KL+ ++ G +++ L
Sbjct: 787 AALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVI-GADPIDMFAL 845
Query: 88 PALIKLHFPKD 98
+ H K+
Sbjct: 846 SKKLSAHLIKE 856
>gi|15605375|ref|NP_220161.1| DNA topoisomerase I/SWI [Chlamydia trachomatis D/UW-3/CX]
gi|76789382|ref|YP_328468.1| fused DNA topoisomerase I/SWI domain-containing protein [Chlamydia
trachomatis A/HAR-13]
gi|237803072|ref|YP_002888266.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis B/Jali20/OT]
gi|237804993|ref|YP_002889147.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis B/TZ1A828/OT]
gi|376282652|ref|YP_005156478.1| DNA topoisomerase I [Chlamydia trachomatis A2497]
gi|385240176|ref|YP_005808018.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/9768]
gi|385241102|ref|YP_005808943.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/11222]
gi|385242955|ref|YP_005810794.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/9301]
gi|385246562|ref|YP_005815384.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/11074]
gi|3329092|gb|AAC68820.1| DNA Topoisomerase I-Fused to SWI Domain [Chlamydia trachomatis
D/UW-3/CX]
gi|76167912|gb|AAX50920.1| DNA topoisomerase I [Chlamydia trachomatis A/HAR-13]
gi|231273293|emb|CAX10208.1| DNA topoisomerase I [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274306|emb|CAX11101.1| DNA topoisomerase I [Chlamydia trachomatis B/Jali20/OT]
gi|296436181|gb|ADH18355.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/9768]
gi|296437110|gb|ADH19280.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/11222]
gi|296438041|gb|ADH20202.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/11074]
gi|297140543|gb|ADH97301.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/9301]
gi|371908682|emb|CAX09314.1| DNA topoisomerase I [Chlamydia trachomatis A2497]
gi|438690580|emb|CCP49837.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/7249]
gi|438691665|emb|CCP48939.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/5291]
gi|438693038|emb|CCP48040.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis A/363]
gi|440525570|emb|CCP50821.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis K/SotonK1]
gi|440528246|emb|CCP53730.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis D/SotonD5]
gi|440532710|emb|CCP58220.1| DNA topoisomerase I/SWI domain fusion protein [Chlamydia
trachomatis G/SotonG1]
Length = 857
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK LQ P NK ++ D KL+ ++ G +++ L
Sbjct: 787 AALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVI-GADPIDMFAL 845
Query: 88 PALIKLHFPKD 98
+ H K+
Sbjct: 846 SKKLSAHLIKE 856
>gi|385243850|ref|YP_005811696.1| DNA topoisomerase I [Chlamydia trachomatis D-EC]
gi|385244730|ref|YP_005812574.1| DNA topoisomerase I [Chlamydia trachomatis D-LC]
gi|385270359|ref|YP_005813519.1| DNA topoisomerase I [Chlamydia trachomatis A2497]
gi|297748773|gb|ADI51319.1| DNA topoisomerase I [Chlamydia trachomatis D-EC]
gi|297749653|gb|ADI52331.1| DNA topoisomerase I [Chlamydia trachomatis D-LC]
gi|347975499|gb|AEP35520.1| DNA topoisomerase I [Chlamydia trachomatis A2497]
Length = 870
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 28 STLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAEL 87
+ L +G + R ++W YIK LQ P NK ++ D KL+ ++ G +++ L
Sbjct: 800 AALAAVIGADPVGRPEATKKLWEYIKEKGLQSPQNKKIIIPDSKLQGVI-GADPIDMFAL 858
Query: 88 PALIKLHFPKD 98
+ H K+
Sbjct: 859 SKKLSAHLIKE 869
>gi|297744733|emb|CBI37995.3| unnamed protein product [Vitis vinifera]
Length = 868
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
YIK N L+DP K+ + CD +L L GK RV E+ L++ HF
Sbjct: 376 YIKRNKLRDPRRKSQIICDSRLE-YLFGKPRVGHFEMLKLLESHF 419
>gi|389743096|gb|EIM84281.1| SWI/SNF complex subunit [Stereum hirsutum FP-91666 SS1]
Length = 414
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 12 DNPKKLANLIDLVNLPSTLR------EFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNV 65
D P K+ L+ + + P + +G SR G +W+YIK N LQD ++
Sbjct: 175 DQPTKVRILLHVEHYPEQFKVHPDLGSVLGIKEDSRAGVIQTLWNYIKINGLQDKADRKR 234
Query: 66 VNCDQKLRSIL 76
++ D LR I
Sbjct: 235 IHIDAALRPIF 245
>gi|312378188|gb|EFR24830.1| hypothetical protein AND_10347 [Anopheles darlingi]
Length = 297
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L G + R ++W+ IK NL DP NK CD +L+ ++ G R
Sbjct: 227 LSADLAALCGAESLPRHEVVKKIWTIIKERNLYDPKNKQFAICDAELQKVI-GVKRFRTF 285
Query: 86 ELPALIKLHF 95
+ +K HF
Sbjct: 286 GMLKYLKPHF 295
>gi|301627860|ref|XP_002943085.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily D
member 3-like [Xenopus (Silurana) tropicalis]
Length = 476
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R +W YIKTN LQD ++K ++ D+ + I R++ +E+P
Sbjct: 262 LARLLGLHTQTRAVIIQALWQYIKTNKLQDCHDKEYISGDKYFQQIF-DCPRLKFSEIPQ 320
Query: 90 -LIKLHFPKDP 99
L L P DP
Sbjct: 321 RLTNLLLPPDP 331
>gi|297832742|ref|XP_002884253.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330093|gb|EFH60512.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 428
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHFPKDP 99
+W Y+K LQ+PN+ + NCD L L G+ +++ L I H P
Sbjct: 244 IWHYVKARKLQNPNDPSFFNCDAALHR-LFGEEKMKFTMLSHKISQHLSPPP 294
>gi|307109486|gb|EFN57724.1| hypothetical protein CHLNCDRAFT_57254 [Chlorella variabilis]
Length = 571
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 48 VWSYIKTNNLQDPNNKN--VVNCDQKLRSILMGKSRVELAELPALIKLHF 95
+W YIK L +P++K V CD++LR L G VEL ++ +K H
Sbjct: 290 LWGYIKAKQLYEPSDKGSVCVRCDERLRP-LFGTDSVELGKMAEALKQHL 338
>gi|15241324|ref|NP_196921.1| SWI/SNF complex component SNF12-like protein [Arabidopsis thaliana]
gi|73622093|sp|Q9FMT4.1|SNF12_ARATH RecName: Full=SWI/SNF complex component SNF12 homolog
gi|9757798|dbj|BAB08296.1| unnamed protein product [Arabidopsis thaliana]
gi|17473640|gb|AAL38282.1| unknown protein [Arabidopsis thaliana]
gi|31711950|gb|AAP68331.1| At5g14170 [Arabidopsis thaliana]
gi|332004612|gb|AED91995.1| SWI/SNF complex component SNF12-like protein [Arabidopsis thaliana]
Length = 534
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L + +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 321 LSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVF-GEEKLKFT 379
Query: 86 ELPALIKLHFPKDP 99
+ I H P
Sbjct: 380 MVSQKISHHLSPPP 393
>gi|15618487|ref|NP_224773.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae CWL029]
gi|15836109|ref|NP_300633.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae J138]
gi|16752461|ref|NP_444723.1| hypothetical protein CP0171 [Chlamydophila pneumoniae AR39]
gi|33241932|ref|NP_876873.1| hypothetical protein CpB0601 [Chlamydophila pneumoniae TW-183]
gi|384449161|ref|YP_005661763.1| SWIB/MDM2 domain-containing protein [Chlamydophila pneumoniae
LPCoLN]
gi|4376870|gb|AAD18716.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae CWL029]
gi|7189103|gb|AAF38047.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
gi|8978949|dbj|BAA98784.1| SWIB (YM74) complex protein [Chlamydophila pneumoniae J138]
gi|33236442|gb|AAP98530.1| hypothetical protein CpB0601 [Chlamydophila pneumoniae TW-183]
gi|269303455|gb|ACZ33555.1| SWIB/MDM2 domain protein [Chlamydophila pneumoniae LPCoLN]
Length = 87
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVE 83
VN+ + L VG+ + R +VW YIK +N QD NK + D L + ++
Sbjct: 14 VNISTDLAVIVGKGPMPRTEIVKKVWEYIKKHNCQDQKNKRNILPDANLAKVFGSSDPID 73
Query: 84 LAELPALIKLHFPK 97
+ ++ + H K
Sbjct: 74 MFQMTKALSKHIVK 87
>gi|289740333|gb|ADD18914.1| RNA polymerase I transcription factor subunit Spp27 [Glossina
morsitans morsitans]
Length = 239
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL L +G + R +VW+ IK NL DP NK CD +L ++
Sbjct: 168 NLSPELSALMGADALPRHEVVKKVWAIIKERNLYDPKNKQFAICDDELMKVM 219
>gi|366989529|ref|XP_003674532.1| hypothetical protein NCAS_0B00710 [Naumovozyma castellii CBS 4309]
gi|342300396|emb|CCC68155.1| hypothetical protein NCAS_0B00710 [Naumovozyma castellii CBS 4309]
Length = 249
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
LR F G++ +++ R+W YI+ + L+ NN + CD KL
Sbjct: 129 LRGFFGETELTKSEIMNRIWDYIELHKLKRSNNSEEILCDDKL 171
>gi|224119656|ref|XP_002318127.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222858800|gb|EEE96347.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 397
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W Y+K+ LQ+PN+ + CD L+ L G+ +++ +
Sbjct: 185 LSPALSEVLGIEIETRPRILAAIWHYVKSRKLQNPNDPSFFTCDPLLQK-LFGEEKMKFS 243
Query: 86 ELPALIKLH 94
+ I LH
Sbjct: 244 LVSQKISLH 252
>gi|432922339|ref|XP_004080303.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2-like
[Oryzias latipes]
Length = 494
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I R+ +E+P
Sbjct: 280 LARLLGVHTQTRASIMQALWLYIKNNKLQDCHEKEFINCNRYFRQIF-NCPRMRFSEIP 337
>gi|297811539|ref|XP_002873653.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319490|gb|EFH49912.1| SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L + +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 321 LSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVF-GEEKLKFT 379
Query: 86 ELPALIKLHFPKDP 99
+ I H P
Sbjct: 380 MVSQKISHHLSPPP 393
>gi|326529873|dbj|BAK08216.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 465
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W YIK LQ+P++ + CD +L+ + G+ ++ A
Sbjct: 250 LSQPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPSDPSYFMCDPQLKKVF-GEDKMRFA 308
Query: 86 ELPALIKLHFPKDP 99
L I H P
Sbjct: 309 MLSQKISQHLAPPP 322
>gi|159163177|pdb|1V31|A Chain A, Solution Structure Of The SwibMDM2 DOMAIN OF THE
Hypothetical Protein At5g14170 From Arabidopsis
Thaliana
Length = 93
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L + L + +G +R +W Y+K LQ+PN+ + NCD L+ + G+ +++
Sbjct: 14 LSTALMDVLGIEVETRPRIIAAIWHYVKARKLQNPNDPSFFNCDAALQKVF-GEEKLKFT 72
Query: 86 ELPALIKLH 94
+ I H
Sbjct: 73 MVSQKISHH 81
>gi|403414980|emb|CCM01680.1| predicted protein [Fibroporia radiculosa]
Length = 418
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L +G +R G +W+YIK+ LQD ++ + D LR I G + LP
Sbjct: 205 LGNILGLQEETRTGVVQALWNYIKSQGLQDKVDRRAIRADSALRPIF-GADSMLFQHLPE 263
Query: 90 LIKLHF-PKDP 99
L+ P DP
Sbjct: 264 LVNRFLQPADP 274
>gi|301105769|ref|XP_002901968.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099306|gb|EEY57358.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 375
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+KL L L L +G+S ++R W+Y+K + LQDP + +++ + ++ +
Sbjct: 291 QKLMATKQLYRLSPALSNMLGKSELTRPAAIKEFWAYVKKHELQDPKDGRMIHPNAEMMN 350
Query: 75 ILMGKSRVELAELPALIKLHFPK 97
+ ++ ++ L+ H K
Sbjct: 351 VFK-VEEIKFTQVMGLVSKHLEK 372
>gi|195439808|ref|XP_002067751.1| GK12593 [Drosophila willistoni]
gi|194163836|gb|EDW78737.1| GK12593 [Drosophila willistoni]
Length = 246
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL L +G + R +VW+ IK +L DP NK CD +L I+
Sbjct: 175 NLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKIM 226
>gi|156339153|ref|XP_001620097.1| hypothetical protein NEMVEDRAFT_v1g149197 [Nematostella vectensis]
gi|156204463|gb|EDO27997.1| predicted protein [Nematostella vectensis]
Length = 320
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIK++NLQD + + +N D+ + I R++ +E+P L +L P DP
Sbjct: 190 IWQYIKSHNLQDSHEREYINNDRYFQQIFEC-PRMKFSEIPQRLNQLLVPPDP 241
>gi|224055719|ref|XP_002298619.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222845877|gb|EEE83424.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 555
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W Y+K LQ+P + + NCD L+ + G+S+++
Sbjct: 342 LSPALMEVLGIEVETRPRIIAAIWHYVKARKLQNPEDPSFFNCDAPLQKVF-GESKMKFT 400
Query: 86 ELPALIKLH 94
+ I H
Sbjct: 401 MVSQRISQH 409
>gi|403412492|emb|CCL99192.1| predicted protein [Fibroporia radiculosa]
Length = 333
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 37 SRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++SR ++W YIK N LQ+P K + CD KL+++
Sbjct: 278 EKLSRPQVVKQLWDYIKGNGLQNPAAKKEILCDDKLKALF 317
>gi|327275746|ref|XP_003222633.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2-like [Anolis
carolinensis]
Length = 456
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELP 88
L +G +R +W YIK N LQD + K +NC++ R I R+ +E+P
Sbjct: 242 LARLLGVHTQTRASIMQALWLYIKHNKLQDNHEKEYINCNRYFRQIF-NCIRMRFSEIP 299
>gi|402084129|gb|EJT79147.1| hypothetical protein GGTG_04235 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 538
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++ L + V S SR R+W YI+ N LQ+ K CD LR IL
Sbjct: 301 SISPALADIVDMSEGSRTEITTRLWDYIRLNGLQEEEEKRQFRCDHLLRKIL 352
>gi|429849593|gb|ELA24958.1| serine threonine protein [Colletotrichum gloeosporioides Nara gc5]
Length = 1279
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 30/74 (40%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E V + SR + VW YIK LQ+ K CD LR I+ G +
Sbjct: 1056 LSPELAEVVDMTEASRQEVVLAVWEYIKMMGLQEDEEKRNFRCDDLLRKIINGNDVGMIP 1115
Query: 86 ELPALIKLHFPKDP 99
L I+ H P
Sbjct: 1116 NLNDYIQPHLRPLP 1129
>gi|226489210|emb|CAX75749.1| Upstream activation factor subunit UAF30 [Schistosoma japonicum]
Length = 162
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E+VG +SR + W K +L DPNNK V C++ + +
Sbjct: 92 LSDELAEYVGAKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQRLF 142
>gi|402084128|gb|EJT79146.1| hypothetical protein, variant [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 512
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++ L + V S SR R+W YI+ N LQ+ K CD LR IL
Sbjct: 275 SISPALADIVDMSEGSRTEITTRLWDYIRLNGLQEEEEKRQFRCDHLLRKIL 326
>gi|17557143|ref|NP_499250.1| Protein HAM-3 [Caenorhabditis elegans]
gi|3881505|emb|CAA87424.1| Protein HAM-3 [Caenorhabditis elegans]
Length = 446
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + +G + +R +W YIKT+ LQDP +++ +N D L G S++ E+P
Sbjct: 231 LAKVLGIAAETRPRIIEALWQYIKTHKLQDPQDRDTINNDLFLEQCF-GVSKMRFMEIPQ 289
Query: 90 LIKLH 94
+LH
Sbjct: 290 --RLH 292
>gi|255639447|gb|ACU20018.1| unknown [Glycine max]
Length = 189
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 18 ANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPN 61
L + + L+ VGQ +SR ++W+YI+ NNLQDP+
Sbjct: 146 GGLTKICGVSPELQVIVGQPALSRTEIVKQLWAYIRKNNLQDPS 189
>gi|428179827|gb|EKX48696.1| hypothetical protein GUITHDRAFT_136391 [Guillardia theta CCMP2712]
Length = 422
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 18 ANLIDLVNLPS-TLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
N+++L +L +F G S+ W+Y+K+ L DP++ + +++LR+I
Sbjct: 184 GNVVELTRFSDDSLTDFFGIQTGSKQEFVRAFWNYVKSRKLHDPDDITKIRFEEELRTIF 243
Query: 77 MGKSRVELAELPALIK 92
+S ++ E+ +LI+
Sbjct: 244 RQES-IKFTEISSLIE 258
>gi|226489212|emb|CAX75750.1| Upstream activation factor subunit UAF30 [Schistosoma japonicum]
Length = 220
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQ 70
L L E+VG +SR + W K +L DPNNK V C++
Sbjct: 150 LSDELAEYVGAKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNE 194
>gi|356517883|ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
Length = 1421
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 28 STLREFVGQSR------ISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSR 81
+ L EFV R +S+ + YIK N L+DP K+ + CD +L++ L GK +
Sbjct: 440 TELLEFVMHMRNGDKSVLSQFDVHTLLLEYIKRNKLRDPRRKSQIICDARLQN-LFGKPK 498
Query: 82 VELAELPALIKLHF 95
V E L++ HF
Sbjct: 499 VGHFETLKLLESHF 512
>gi|294874755|ref|XP_002767082.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239868510|gb|EEQ99799.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 154
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%)
Query: 10 VIDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCD 69
V+ + L L L L VG + SR+ ++W YIK++NLQ+ +K + D
Sbjct: 58 VMKEGPHITGLHQLCALSPELSTIVGAPKASRVDITKKLWGYIKSHNLQEETDKRNIKPD 117
Query: 70 QKL 72
L
Sbjct: 118 AAL 120
>gi|195377146|ref|XP_002047353.1| GJ11979 [Drosophila virilis]
gi|194154511|gb|EDW69695.1| GJ11979 [Drosophila virilis]
Length = 247
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K NL L +G + R +VW+ IK +L DP NK CD +L
Sbjct: 166 RKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMK 225
Query: 75 IL 76
++
Sbjct: 226 VM 227
>gi|308502249|ref|XP_003113309.1| CRE-TAG-246 protein [Caenorhabditis remanei]
gi|308265610|gb|EFP09563.1| CRE-TAG-246 protein [Caenorhabditis remanei]
Length = 446
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA 89
L + +G + +R +W YIKT+ LQDP +++ +N D L G S++ E+P
Sbjct: 231 LAKVLGIAAETRPRIIEALWQYIKTHKLQDPQDRDTINNDLFLEQCF-GVSKMRFMEIPQ 289
Query: 90 LIKLH 94
+LH
Sbjct: 290 --RLH 292
>gi|195126905|ref|XP_002007909.1| GI13202 [Drosophila mojavensis]
gi|193919518|gb|EDW18385.1| GI13202 [Drosophila mojavensis]
Length = 245
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 15 KKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRS 74
+K NL L +G + R +VW+ IK +L DP NK CD +L
Sbjct: 164 RKSTGFTRAYNLSPELSALMGADSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMK 223
Query: 75 IL 76
++
Sbjct: 224 VM 225
>gi|195587282|ref|XP_002083394.1| GD13706 [Drosophila simulans]
gi|194195403|gb|EDX08979.1| GD13706 [Drosophila simulans]
Length = 229
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 30 LREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L +G+S + R +VW+ IK +L DP NK CD +L ++
Sbjct: 163 LSALMGESSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVM 209
>gi|226471292|emb|CAX70727.1| Upstream activation factor subunit UAF30 [Schistosoma japonicum]
Length = 220
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQ 70
L L E+VG +SR + W K +L DPNNK V C++
Sbjct: 150 LSDELAEYVGAKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNE 194
>gi|38346638|emb|CAD40740.2| OSJNBa0072D21.8 [Oryza sativa Japonica Group]
Length = 512
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 13 NPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKL 72
NP+K L L E +G +R +W YIK LQ+P + + CD +L
Sbjct: 289 NPEKF-------KLSQPLMEVLGVEVDTRSRVIAALWQYIKAKKLQNPTDPSFFMCDPQL 341
Query: 73 RSILMGKSRVELAELPALIKLHFPKDP 99
+ + G+ ++ A L I H P
Sbjct: 342 KKVF-GEDKLRFAMLSQKISQHLSPPP 367
>gi|302660718|ref|XP_003022035.1| hypothetical protein TRV_03852 [Trichophyton verrucosum HKI 0517]
gi|291185961|gb|EFE41417.1| hypothetical protein TRV_03852 [Trichophyton verrucosum HKI 0517]
Length = 540
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKL 93
+R G +W Y+K LQ+ K + CD +LR++ S L + LIK+
Sbjct: 311 TRAGIVAGIWEYVKAMGLQENEEKRTIQCDDRLRAVSWNSSSYYLFKCKKLIKM 364
>gi|356511807|ref|XP_003524614.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
Length = 543
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W Y+K LQ+PN+ + +CD L+ + G+ ++
Sbjct: 330 LSPALTEVLGIEVDTRPRIVAAIWHYVKARKLQNPNDPSYFHCDPPLQKVF-GEENMKFT 388
Query: 86 ELPALIKLH-FPKDP 99
+ I H FP P
Sbjct: 389 MVSQKISSHLFPPQP 403
>gi|224133770|ref|XP_002327676.1| predicted protein [Populus trichocarpa]
gi|222836761|gb|EEE75154.1| predicted protein [Populus trichocarpa]
Length = 825
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
Y+K NNL+DP K+ + CD +L L GK V E+ L+ HF
Sbjct: 309 YVKRNNLRDPRQKSHIVCDSRLIK-LFGKEHVGHFEMLKLLDYHF 352
>gi|19114022|ref|NP_593110.1| SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces pombe
972h-]
gi|74625425|sp|Q9P7S3.1|SSR3_SCHPO RecName: Full=SWI/SNF and RSC complexes subunit ssr3
gi|6912027|emb|CAB72235.1| SWI/SNF and RSC complex subunit Ssr3 [Schizosaccharomyces pombe]
Length = 425
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALI-KLHFPKDP 99
+W YIK + LQD K ++NCD+ LR L R+ +P L+ + P DP
Sbjct: 230 LWQYIKFHRLQDMEEKRLINCDKALRD-LFEADRLYFPRIPELMNRFLEPIDP 281
>gi|167534218|ref|XP_001748787.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772749|gb|EDQ86397.1| predicted protein [Monosiga brevicollis MX1]
Length = 624
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 9/92 (9%)
Query: 16 KLANLIDLVN-------LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNC 68
KLA L+ + N LP L +G ++ +W+YI N L DP ++ C
Sbjct: 385 KLATLLLVQNDLPPRFKLPPMLANILGLYADTKGTITHTLWAYIMQNKLIDPKKDELITC 444
Query: 69 DQKLRSILMGKSRVELAELP-ALIKLHFPKDP 99
D+ L+ I K ++ + EL L ++ P DP
Sbjct: 445 DKYLKHIF-SKEKLAVEELSIELDRVLLPVDP 475
>gi|328876345|gb|EGG24708.1| CHC group protein [Dictyostelium fasciculatum]
Length = 443
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF-PKDP 99
+W+YIK N L D +K V+ CD +L++I G ++ ++P L++ H P DP
Sbjct: 249 LWNYIKVNRLLDLESKKVL-CDDQLKNIF-GVDSMQFNQIPQLLREHLGPADP 299
>gi|356560487|ref|XP_003548523.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF complex component SNF12
homolog [Glycine max]
Length = 417
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 21 IDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKS 80
+++ +P LRE +G +R +W Y+K Q+ N+ + CDQ L+ + G+
Sbjct: 202 LEMNYVPPALREVLGVQVDTRSRIVSAIWYYVKARKSQNLNDPSFFQCDQALQRVF-GED 260
Query: 81 RVELAELPALIKLH-FP 96
+V+ + I H FP
Sbjct: 261 KVKFTMVLQKISQHLFP 277
>gi|125548026|gb|EAY93848.1| hypothetical protein OsI_15624 [Oryza sativa Indica Group]
Length = 397
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W YIK LQ+P + + CD +L+ + G+ ++ A
Sbjct: 180 LSQPLMEVLGVEVDTRSRVIAALWQYIKAKKLQNPTDPSFFMCDPQLKKVF-GEDKLRFA 238
Query: 86 ELPALIKLHFPKDP 99
L I H P
Sbjct: 239 MLSQKISQHLSPPP 252
>gi|256071676|ref|XP_002572165.1| hypothetical protein [Schistosoma mansoni]
gi|353229931|emb|CCD76102.1| hypothetical protein Smp_006830.1 [Schistosoma mansoni]
Length = 220
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQ 70
+ L + E++G+ +SR + W + +L DPNNK V C++
Sbjct: 148 LTLSDEMAEYIGEKELSRSDLVKKFWEIAREQDLFDPNNKQFVVCNE 194
>gi|156398524|ref|XP_001638238.1| predicted protein [Nematostella vectensis]
gi|156225357|gb|EDO46175.1| predicted protein [Nematostella vectensis]
Length = 386
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 48 VWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPA-LIKLHFPKDP 99
+W YIK++NLQD + + +N D+ + I R++ +E+P L +L P DP
Sbjct: 190 IWQYIKSHNLQDSHEREYINNDRYFQQIFEC-PRMKFSEIPQRLNQLLVPPDP 241
>gi|221117602|ref|XP_002163319.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 1-like [Hydra
magnipapillata]
Length = 460
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L S L +G +R +W YIK N LQD + +N D+ + I + R++
Sbjct: 245 LSSQLARVLGIHTQTRPVIIGALWQYIKQNKLQDQEEREFINNDKYMAEIFSCQ-RMKFC 303
Query: 86 ELPALIKLH-FPKDP 99
E+P ++ H P +P
Sbjct: 304 EIPQRLQAHLLPPEP 318
>gi|56753700|gb|AAW25047.1| unknown [Schistosoma japonicum]
gi|60687700|gb|AAX30183.1| SJCHGC01608 protein [Schistosoma japonicum]
Length = 100
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E+VG +SR + W K +L DPNNK V C++ + +
Sbjct: 30 LSDELAEYVGAKELSRSDLVKKFWKIAKEQDLFDPNNKQFVVCNEDWQRLF 80
>gi|116309288|emb|CAH66378.1| OSIGBa0092E09.5 [Oryza sativa Indica Group]
Length = 549
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W YIK LQ+P + + CD +L+ + G+ ++ A
Sbjct: 332 LSQPLMEVLGVEVDTRSRVIAALWQYIKAKKLQNPTDPSFFMCDPQLKKVF-GEDKLRFA 390
Query: 86 ELPALIKLHFPKDP 99
L I H P
Sbjct: 391 MLSQKISQHLSPPP 404
>gi|115458010|ref|NP_001052605.1| Os04g0382100 [Oryza sativa Japonica Group]
gi|113564176|dbj|BAF14519.1| Os04g0382100, partial [Oryza sativa Japonica Group]
Length = 346
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W YIK LQ+P + + CD +L+ + G+ ++ A
Sbjct: 129 LSQPLMEVLGVEVDTRSRVIAALWQYIKAKKLQNPTDPSFFMCDPQLKKVF-GEDKLRFA 187
Query: 86 ELPALIKLHFPKDP 99
L I H P
Sbjct: 188 MLSQKISQHLSPPP 201
>gi|409080743|gb|EKM81103.1| hypothetical protein AGABI1DRAFT_56449 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 254
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 38 RISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
++SR +W +IK N LQ+PNNK + CD ++++
Sbjct: 193 KMSRPQVVKGIWDHIKGNALQNPNNKREIICDGSMKAVF 231
>gi|1549245|gb|AAC50696.1| SWI/SNF complex 60 KDa subunit [Homo sapiens]
Length = 475
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 257 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 315
Query: 86 ELP 88
E+P
Sbjct: 316 EIP 318
>gi|341039027|gb|EGS24019.1| hypothetical protein CTHT_0007300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
L L E V +R M VW YIK N LQ+ K CD L+ I+
Sbjct: 299 LSPELAEIVDMKEATRQEAVMAVWEYIKLNKLQEDEEKRNFRCDDMLKKII 349
>gi|356540797|ref|XP_003538871.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Glycine max]
Length = 1365
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
Y NNL+DP K+ + CD +L + L GK+RV E+ L++ HF
Sbjct: 340 YANKNNLRDPQQKSQIVCDSRLLN-LFGKARVGHIEMLKLLEPHF 383
>gi|449457618|ref|XP_004146545.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Cucumis sativus]
gi|449515257|ref|XP_004164666.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Cucumis sativus]
Length = 1201
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 21/92 (22%)
Query: 23 LVNLPSTLREFVGQS--------------------RISRLGCFMRVWSYIKTNNLQDPNN 62
LV+ PS+ +F G + R+S L + Y+K NNL+DP
Sbjct: 260 LVDRPSSNEQFSGSTKWGTTELMDLVAHMRNGDTTRLSPLDVQALLLEYVKKNNLRDPQQ 319
Query: 63 KNVVNCDQKLRSILMGKSRVELAELPALIKLH 94
++ + CD +L + L GKSR+ E+ L++ H
Sbjct: 320 QSQIICDFRLTN-LFGKSRIGHFEMLNLLQSH 350
>gi|390463227|ref|XP_002748157.2| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 [Callithrix
jacchus]
Length = 553
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 335 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 393
Query: 86 ELP 88
E+P
Sbjct: 394 EIP 396
>gi|301778299|ref|XP_002924575.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2-like
[Ailuropoda melanoleuca]
Length = 527
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 309 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 367
Query: 86 ELP 88
E+P
Sbjct: 368 EIP 370
>gi|194749288|ref|XP_001957071.1| GF24247 [Drosophila ananassae]
gi|190624353|gb|EDV39877.1| GF24247 [Drosophila ananassae]
Length = 247
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 25 NLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
NL L +G + R +VW+ IK +L DP NK CD +L ++
Sbjct: 176 NLSPELSALMGAQSLPRHEVVKKVWAIIKERDLYDPKNKQFAICDDELMKVM 227
>gi|356495372|ref|XP_003516552.1| PREDICTED: zinc finger CCCH domain-containing protein 44-like
[Glycine max]
Length = 1953
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 51 YIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF 95
Y NNL+DP K+ + CD +L + L GK+RV E+ L++ HF
Sbjct: 332 YANKNNLRDPQQKSQIVCDSRLLN-LFGKTRVGHIEMLKLLEPHF 375
>gi|388853824|emb|CCF52545.1| related to SWI/SNF related, matrix associated, actin dependent
regulator of chromatin subfamily D member 1 [Ustilago
hordei]
Length = 900
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF-PKD 98
SR G +WSY+K L D ++ V CD LRS L + +P +I + P
Sbjct: 674 SRAGVISALWSYVKEKKLLDETDRKKVKCDAALRS-LFNTDTINFHHIPEVINRYLHPAQ 732
Query: 99 P 99
P
Sbjct: 733 P 733
>gi|240278610|gb|EER42116.1| SWI-SNF complex subunit [Ajellomyces capsulatus H143]
Length = 392
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF-PKD 98
+R G + +W YIK +LQ+ +K V CD +L++ L + ++ +P H P D
Sbjct: 306 ARGGIVVGIWEYIKAMDLQENEDKREVRCDDRLKA-LFNRDKMFFPAIPDSASAHTSPLD 364
Query: 99 P 99
P
Sbjct: 365 P 365
>gi|410981504|ref|XP_003997108.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 [Felis
catus]
Length = 484
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 266 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 324
Query: 86 ELP 88
E+P
Sbjct: 325 EIP 327
>gi|380800503|gb|AFE72127.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2, partial [Macaca mulatta]
Length = 480
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 262 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 320
Query: 86 ELP 88
E+P
Sbjct: 321 EIP 323
>gi|344285253|ref|XP_003414377.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 [Loxodonta
africana]
Length = 531
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 313 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 371
Query: 86 ELP 88
E+P
Sbjct: 372 EIP 374
>gi|223460086|gb|AAI36323.1| SMARCD2 protein [Homo sapiens]
Length = 494
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 276 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 334
Query: 86 ELP 88
E+P
Sbjct: 335 EIP 337
>gi|357163026|ref|XP_003579601.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Brachypodium
distachyon]
Length = 526
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L E +G +R +W YIK LQ+P + + CD +L+ + G+ ++ A
Sbjct: 311 LSQPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPGDPSYFICDPQLKKVF-GEDKMRFA 369
Query: 86 ELPALIKLHFPKDP 99
L I H P
Sbjct: 370 MLSQKISQHLAPPP 383
>gi|378727063|gb|EHY53522.1| 26S proteasome regulatory subunit N6 [Exophiala dermatitidis
NIH/UT8656]
Length = 487
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L + + + R M +W Y+K LQ+ + + + CD LR L G +
Sbjct: 268 LSPVLVDMLDMTEADRAEVVMAIWDYVKLFGLQEEDERRTIRCDDNLRQ-LFGTETISFP 326
Query: 86 ELPALIKLH-FPKDP 99
++P I + P DP
Sbjct: 327 QIPERILPYLLPLDP 341
>gi|443898720|dbj|GAC76054.1| SWI/SNF transcription activation complex subunit [Pseudozyma
antarctica T-34]
Length = 896
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 40 SRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELAELPALIKLHF-PKD 98
SR G +WSY+K L D ++ V CD LRS L + +P +I + P
Sbjct: 672 SRAGVISALWSYVKEKKLLDETDRKKVKCDAALRS-LFNTDTINFHHIPEVINRYLHPAQ 730
Query: 99 P 99
P
Sbjct: 731 P 731
>gi|256071678|ref|XP_002572166.1| hypothetical protein [Schistosoma mansoni]
gi|353229930|emb|CCD76101.1| hypothetical protein Smp_006830.3 [Schistosoma mansoni]
Length = 169
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 24 VNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSIL 76
+ L + E++G+ +SR + W + +L DPNNK V C++ + +
Sbjct: 97 LTLSDEMAEYIGEKELSRSDLVKKFWEIAREQDLFDPNNKQFVVCNEDWQRLF 149
>gi|50288521|ref|XP_446690.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525998|emb|CAG59617.1| unnamed protein product [Candida glabrata]
Length = 241
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 11 IDNPKKLANLIDLVNLPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQ 70
+ N KK I + P L+ +G SR +W YIK +NLQ+P++K + D
Sbjct: 116 VTNSKKSMIHIKMTVTPE-LQAVIGTHYQSRTEIVRNLWKYIKEHNLQNPDDKRQIISDA 174
Query: 71 KLRSILMGKS 80
L +L GK+
Sbjct: 175 MLEPVL-GKT 183
>gi|74192861|dbj|BAE34940.1| unnamed protein product [Mus musculus]
Length = 531
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 313 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 371
Query: 86 ELP 88
E+P
Sbjct: 372 EIP 374
>gi|346716326|ref|NP_001231181.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2 [Sus scrofa]
gi|456753150|gb|JAA74108.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Sus scrofa]
Length = 531
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 313 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 371
Query: 86 ELP 88
E+P
Sbjct: 372 EIP 374
>gi|355568826|gb|EHH25107.1| hypothetical protein EGK_08869 [Macaca mulatta]
gi|355754287|gb|EHH58252.1| hypothetical protein EGM_08056 [Macaca fascicularis]
Length = 484
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 266 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 324
Query: 86 ELP 88
E+P
Sbjct: 325 EIP 327
>gi|149723377|ref|XP_001500883.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2-like isoform
2 [Equus caballus]
Length = 531
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 313 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 371
Query: 86 ELP 88
E+P
Sbjct: 372 EIP 374
>gi|148536864|ref|NP_001091896.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2 [Homo sapiens]
gi|402900738|ref|XP_003913325.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 isoform 1
[Papio anubis]
gi|426347145|ref|XP_004041219.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 isoform 1
[Gorilla gorilla gorilla]
gi|322510105|sp|Q92925.3|SMRD2_HUMAN RecName: Full=SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2; AltName:
Full=60 kDa BRG-1/Brm-associated factor subunit B;
AltName: Full=BRG1-associated factor 60B; Short=BAF60B
gi|119614673|gb|EAW94267.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2, isoform CRA_b [Homo
sapiens]
gi|194374907|dbj|BAG62568.1| unnamed protein product [Homo sapiens]
gi|383412013|gb|AFH29220.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2 [Macaca mulatta]
gi|387540246|gb|AFJ70750.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily D member 2 [Macaca mulatta]
Length = 531
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 313 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 371
Query: 86 ELP 88
E+P
Sbjct: 372 EIP 374
>gi|114669842|ref|XP_001148723.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 isoform 7
[Pan troglodytes]
gi|410217600|gb|JAA06019.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Pan troglodytes]
gi|410260282|gb|JAA18107.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Pan troglodytes]
gi|410290980|gb|JAA24090.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Pan troglodytes]
gi|410352363|gb|JAA42785.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily d, member 2 [Pan troglodytes]
Length = 531
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 313 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 371
Query: 86 ELP 88
E+P
Sbjct: 372 EIP 374
>gi|426347147|ref|XP_004041220.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily D member 2 isoform 2
[Gorilla gorilla gorilla]
Length = 483
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 26 LPSTLREFVGQSRISRLGCFMRVWSYIKTNNLQDPNNKNVVNCDQKLRSILMGKSRVELA 85
L L +G +R +W YIK N LQD + + +NC++ R I R+ +
Sbjct: 265 LDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIF-SCGRLRFS 323
Query: 86 ELP 88
E+P
Sbjct: 324 EIP 326
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,534,018,953
Number of Sequences: 23463169
Number of extensions: 51730806
Number of successful extensions: 113393
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 112283
Number of HSP's gapped (non-prelim): 1190
length of query: 100
length of database: 8,064,228,071
effective HSP length: 69
effective length of query: 31
effective length of database: 6,445,269,410
effective search space: 199803351710
effective search space used: 199803351710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)