BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034233
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L7B5|CH60B_ARATH Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana
GN=At2g33210 PE=1 SV=1
Length = 585
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PVYTIA+ A VEG+VV GKLL QDNP+LGYDA KGEYVD+IK GI+DPLKVIR + A
Sbjct: 481 PVYTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAA 540
Query: 61 SM 62
S+
Sbjct: 541 SV 542
>sp|P29197|CH60A_ARATH Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60
PE=1 SV=2
Length = 577
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PVYTIA+ A VEG+V VGKLL QDNP+LGYDA KGEYVD++K GI+DPLKVIR + A
Sbjct: 480 PVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA 539
Query: 61 SM 62
S+
Sbjct: 540 SV 541
>sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2
PE=1 SV=1
Length = 575
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV+TIA+ A VEG+VV GKLL QDNP+LGYDA KGEYVD+IK GI+DPLKVIR + A
Sbjct: 481 PVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAA 540
Query: 61 SM 62
S+
Sbjct: 541 SV 542
>sp|P35480|CH60_BRANA Chaperonin CPN60, mitochondrial OS=Brassica napus PE=2 SV=1
Length = 587
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PVYTIA+ A VEG+V VGKLL DNP+LGYDA KGEYVD++K GI+DP+KVIR + A
Sbjct: 484 PVYTIASNAGVEGAVIVGKLLESDNPDLGYDAAKGEYVDMVKSGIIDPVKVIRTALVDAA 543
Query: 61 SM 62
S+
Sbjct: 544 SV 545
>sp|Q05045|CH61_CUCMA Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1
PE=1 SV=1
Length = 575
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV+TIA+ A VEG+VV GKLL QD+P+LGYDA KGEYVD++K GI+DPLKVIR + A
Sbjct: 481 PVHTIASNAGVEGAVVVGKLLEQDDPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA 540
Query: 61 SM 62
S+
Sbjct: 541 SV 542
>sp|P29185|CH61_MAIZE Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2
Length = 577
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 50/62 (80%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV+TIA+ A VEG+VV GKLL Q+N +LGYDA KGEYVD++K GI+DPLKVIR + A
Sbjct: 483 PVHTIASNAGVEGAVVVGKLLEQENTDLGYDAAKGEYVDMVKTGIIDPLKVIRTALVDAA 542
Query: 61 SM 62
S+
Sbjct: 543 SV 544
>sp|Q43298|CH62_MAIZE Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1
Length = 576
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV+TIA+ A VEG+VV GKLL Q N +LGYDA K EYVD++K GI+DPLKVIR + A
Sbjct: 483 PVHTIASNAGVEGAVVVGKLLEQGNTDLGYDAAKDEYVDMVKAGIIDPLKVIRTALVDAA 542
Query: 61 SM 62
S+
Sbjct: 543 SV 544
>sp|Q93ZM7|CH60C_ARATH Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana
GN=At3g13860 PE=1 SV=2
Length = 572
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P +TIAA A +GS VVGKLL QD+ N G+DA KG+YVD++K GI+DP+KVIR A
Sbjct: 480 PAFTIAANAGYDGSLVVGKLLEQDDCNFGFDAAKGKYVDMVKAGIIDPVKVIRTALTDAA 539
Query: 61 SMFL 64
S+ L
Sbjct: 540 SVSL 543
>sp|Q94596|CH60_LEIMA Chaperonin HSP60, mitochondrial OS=Leishmania major GN=HSP60 PE=3
SV=1
Length = 589
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 19/111 (17%)
Query: 1 MPVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA 59
+P IA A VEGSVV GK+L + +P+ GY+A GEYV++ + GI+DP+KV++ + A
Sbjct: 467 LPARYIANNAGVEGSVVAGKVLARKDPSFGYNAQTGEYVNMFEAGIIDPMKVVKSAVVNA 526
Query: 60 TS---MFLN---------------KLREGQLEDPERKHKKYKKKKKLDDVG 92
S M + ++ + +ED E+K K +K++++ G
Sbjct: 527 CSVAGMMITTEAAVVEKDLLGREKRIEDEGMEDKEKKRSVDKLRKQVNEAG 577
>sp|A5EET6|CH602_BRASB 60 kDa chaperonin 2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=groL2 PE=3 SV=1
Length = 541
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGK+L +P G+DA K EYVDLI+ GI+DP KV+R A
Sbjct: 450 PIRQIADNAGVEGSIVVGKILENRSPTFGFDAQKEEYVDLIEAGIVDPAKVVRTALQDAA 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
>sp|B0SXR2|CH60_CAUSK 60 kDa chaperonin OS=Caulobacter sp. (strain K31) GN=groL PE=3 SV=1
Length = 548
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGK+L D+P G++A +YVDLI +G++DP KV+R A
Sbjct: 450 PIRQIAENAGVEGSIVVGKILENDSPTFGFNAQTEQYVDLIADGVIDPAKVVRTALQDAA 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
>sp|Q4FPA5|CH60_PELUB 60 kDa chaperonin OS=Pelagibacter ubique (strain HTCC1062) GN=groL
PE=3 SV=1
Length = 554
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ I A V+GSVV GKLL Q+ N+GYDA EYVD+ +GI+DP+KV+R A
Sbjct: 449 PIRQITLNAGVDGSVVVGKLLEQNKKNMGYDAQNEEYVDMFAKGIIDPVKVVRTALQDAA 508
Query: 61 SM 62
S+
Sbjct: 509 SI 510
>sp|Q07201|CH60_GEOSE 60 kDa chaperonin OS=Geobacillus stearothermophilus GN=groL PE=2
SV=1
Length = 539
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA TA +EGS++ + L + P +G++A GE+VD+I+ GI+DP KV R A S
Sbjct: 447 PVRQIAQTAGLEGSIIVERLKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAAS 506
Query: 62 ---MFLN 65
MFL
Sbjct: 507 VAAMFLT 513
>sp|Q2RL13|CH601_MOOTA 60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073)
GN=groL1 PE=3 SV=1
Length = 539
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
P+ IAA A +EGSV+ + + + P +G+DA K EYVD+IK GI+DP KV R A S
Sbjct: 448 PLRQIAANAGLEGSVIVERVRSEQPGIGFDAVKEEYVDMIKAGIVDPAKVTRSALQNAAS 507
Query: 62 M 62
+
Sbjct: 508 I 508
>sp|P50142|HSP60_AJECA Heat shock protein 60, mitochondrial OS=Ajellomyces capsulatus
GN=HSP60 PE=3 SV=2
Length = 590
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQ--DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIG 58
P TI A +EGSV VGKL + + N G+D+ KGEYVD+I GI+DPLKV+R +
Sbjct: 489 PARTIVENAGLEGSVIVGKLTDEHASDFNRGFDSAKGEYVDMIASGIVDPLKVVRTALVD 548
Query: 59 AT--SMFLNKLREGQLEDPERK 78
A+ + L +E PE K
Sbjct: 549 ASGVASLLGTTEVAIVEAPEEK 570
>sp|Q5B041|HSP60_EMENI Heat shock protein 60 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=hsp60 PE=1 SV=1
Length = 588
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQ--DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIG 58
P TI A +EGSV VGKL + + N G+D+ KGEYVD+I GI+DPLKV+R +
Sbjct: 485 PARTIVENAGLEGSVIVGKLTDEFSKDFNRGFDSAKGEYVDMIAAGIVDPLKVVRTALVD 544
Query: 59 AT--SMFLNKLREGQLEDPERK 78
A+ S L +E PE K
Sbjct: 545 ASGVSSLLGTTEVAIVEAPEEK 566
>sp|B7GFR6|CH60_ANOFW 60 kDa chaperonin OS=Anoxybacillus flavithermus (strain DSM 21510 /
WK1) GN=groL PE=3 SV=1
Length = 538
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A +EGSV+ + L + P +G++A GE+VD+I+ GI+DP KV R A S
Sbjct: 447 PVRQIAQNAGLEGSVIVERLKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAAS 506
Query: 62 ---MFLN 65
MFL
Sbjct: 507 VAAMFLT 513
>sp|C5D4F4|CH60_GEOSW 60 kDa chaperonin OS=Geobacillus sp. (strain WCH70) GN=groL PE=3
SV=1
Length = 539
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A +EGSV+ + L + P +G++A GE+VD+I+ GI+DP KV R A S
Sbjct: 447 PVRQIAQNAGLEGSVIVERLKTEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAAS 506
Query: 62 ---MFLN 65
MFL
Sbjct: 507 VAAMFLT 513
>sp|A6LQ87|CH60_CLOB8 60 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 /
NCIMB 8052) GN=groL PE=3 SV=1
Length = 541
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A VEGSV+ + + P +GYDA GEY+++IK GI+DP KV R A S
Sbjct: 448 PVRQIATNAGVEGSVIIEKVKNSEPGIGYDALHGEYINMIKGGIVDPTKVTRSALQNAAS 507
Query: 62 M 62
+
Sbjct: 508 V 508
>sp|P0CAT9|CH60_CAUCR 60 kDa chaperonin OS=Caulobacter crescentus (strain ATCC 19089 /
CB15) GN=groL PE=3 SV=1
Length = 547
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGK+L DN G++A +YVDL+ +G++DP KV+R A
Sbjct: 450 PIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVIDPAKVVRTALQNAA 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
>sp|B8H163|CH60_CAUCN 60 kDa chaperonin OS=Caulobacter crescentus (strain NA1000 / CB15N)
GN=groL PE=2 SV=1
Length = 547
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGK+L DN G++A +YVDL+ +G++DP KV+R A
Sbjct: 450 PIRQIAENAGVEGSIVVGKILENDNSAFGFNAQTEQYVDLVVDGVIDPAKVVRTALQNAA 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
>sp|Q3SPG4|CH603_NITWN 60 kDa chaperonin 3 OS=Nitrobacter winogradskyi (strain Nb-255 /
ATCC 25391) GN=groL3 PE=3 SV=1
Length = 548
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGK+L G+DA K EYVD++ +GI+DP KV+R A+
Sbjct: 450 PIRQIAENAGVEGSIVVGKILENKTETFGFDAQKEEYVDMVAKGIIDPAKVVRTALQDAS 509
Query: 61 SM 62
S+
Sbjct: 510 SI 511
>sp|Q54J97|CH60_DICDI 60 kDa heat shock protein, mitochondrial OS=Dictyostelium
discoideum GN=hspA PE=2 SV=1
Length = 556
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 1 MPVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA 59
+P TIA A VEGSVV G+LL + + GY+A KG Y ++I+ GI+DP KV+R I A
Sbjct: 465 IPCKTIANNAGVEGSVVIGRLLSKRDFEYGYNAQKGVYENMIQAGIIDPTKVVRTALIDA 524
Query: 60 TSM 62
S+
Sbjct: 525 ASV 527
>sp|Q7MBB4|CH602_GLOVI 60 kDa chaperonin 2 OS=Gloeobacter violaceus (strain PCC 7421)
GN=groL2 PE=3 SV=1
Length = 553
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
P+ IA A VEGSV+ + + + + N+GYDA KGE+VD++ G+ DP KV+R A S
Sbjct: 450 PLRQIADNAGVEGSVIAQKVRELDFNIGYDAMKGEFVDMLAAGVADPAKVVRSALQNAAS 509
Query: 62 M 62
+
Sbjct: 510 I 510
>sp|Q8VV84|CH60_BACTR 60 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groL PE=3 SV=1
Length = 539
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A +EGSV+ + L + P +G++A GE+V++I+ GI+DP KV R A S
Sbjct: 447 PVRQIAQNAGLEGSVIVERLKSEKPGIGFNAATGEWVNMIEAGIVDPTKVTRSALQNAAS 506
Query: 62 ---MFLN 65
MFL
Sbjct: 507 VAAMFLT 513
>sp|Q9L690|CH603_RHILE 60 kDa chaperonin 3 OS=Rhizobium leguminosarum GN=groL3 PE=3 SV=1
Length = 544
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A EGS VVGKL G +N N G+DA YVD+I+ GI+DP KV+R A
Sbjct: 450 PIRQIADNAGFEGSIVVGKLAGSNNHNQGFDAQTETYVDMIEAGIVDPAKVVRTALQDAG 509
Query: 61 SM 62
S+
Sbjct: 510 SI 511
>sp|B0K3P6|CH60_THEPX 60 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groL
PE=3 SV=1
Length = 541
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV IAA A V+GSV V K+ +PN GYDA K E+ D+ K GI+DP KV R A
Sbjct: 449 PVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAA 508
Query: 61 SM 62
S+
Sbjct: 509 SI 510
>sp|B0KBR3|CH60_THEP3 60 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain
ATCC 33223 / 39E) GN=groL PE=3 SV=1
Length = 541
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV IAA A V+GSV V K+ +PN GYDA K E+ D+ K GI+DP KV R A
Sbjct: 449 PVRQIAANAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAA 508
Query: 61 SM 62
S+
Sbjct: 509 SI 510
>sp|P26209|CH60_BACP3 60 kDa chaperonin OS=Bacillus PS3 GN=groL PE=3 SV=1
Length = 538
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A +EGS++ + L + P +G++A GE+VD+I+ GI+DP KV R A S
Sbjct: 447 PVRQIAQNAGLEGSIIVERLKNEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAAS 506
Query: 62 M 62
+
Sbjct: 507 V 507
>sp|C4ZD46|CH60_EUBR3 60 kDa chaperonin OS=Eubacterium rectale (strain ATCC 33656 / VPI
0990) GN=groL PE=3 SV=1
Length = 541
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
P+Y IAA A +EG+V+ + + P G++A EYVD++ GILDP+KV R ATS
Sbjct: 449 PLYYIAANAGLEGAVIINKVKESAPGTGFNAATEEYVDMVDNGILDPVKVTRSALQNATS 508
Query: 62 M 62
+
Sbjct: 509 V 509
>sp|Q1QIL6|CH603_NITHX 60 kDa chaperonin 3 OS=Nitrobacter hamburgensis (strain X14 / DSM
10229) GN=groL3 PE=3 SV=1
Length = 545
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGK+L G+DA K EYVD++ +GI+DP KV+R A
Sbjct: 450 PIRQIAENAGVEGSIVVGKVLENKTETFGFDAQKEEYVDMVAKGIIDPAKVVRTALQDAA 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
>sp|Q5L3E6|CH60_GEOKA 60 kDa chaperonin OS=Geobacillus kaustophilus (strain HTA426)
GN=groL PE=3 SV=1
Length = 538
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A +EGS++ + L + P +G++A GE+VD+I+ GI+DP KV R A S
Sbjct: 447 PVRQIAQNAGLEGSIIVERLKNEKPGIGFNAATGEWVDMIEAGIVDPTKVTRSALQNAAS 506
Query: 62 M 62
+
Sbjct: 507 V 507
>sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit beta, chloroplastic
OS=Pisum sativum PE=1 SV=2
Length = 595
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVVG-KLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A V GSVV K+L DNP GY+A G+Y DL+ GI+DP KV+R A+
Sbjct: 500 PLKLIAKNAGVNGSVVSEKVLSSDNPKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAS 559
Query: 61 SM 62
S+
Sbjct: 560 SV 561
>sp|Q930Y0|CH603_RHIME 60 kDa chaperonin 3 OS=Rhizobium meliloti (strain 1021) GN=groL3
PE=3 SV=1
Length = 544
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGKL+ + N G+DA YVD+IK GI+DP KV+R A
Sbjct: 450 PIRQIADNAGVEGSIVVGKLVDGRDHNQGFDAQTETYVDMIKAGIVDPAKVVRTALRDAG 509
Query: 61 SMF-LNKLREGQLED-PERKHKKYKKKKKLDDVG 92
S+ L E + D PER + +D +G
Sbjct: 510 SIASLLITAEAMIADIPERGSPQSTGNGAVDSMG 543
>sp|A5ECI7|CH601_BRASB 60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=groL1 PE=3 SV=1
Length = 547
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV IA A VEGS VVGK+L + + G+DA +YVD++ +GI+DP KV+R A+
Sbjct: 450 PVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIIDPAKVVRTALQDAS 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
>sp|C0Z361|CPNB3_ARATH Chaperonin 60 subunit beta 3, chloroplastic OS=Arabidopsis thaliana
GN=CPN60B3 PE=1 SV=1
Length = 597
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVVG-KLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A V GSVV K+L DNP GY+A G+Y DL+ GI+DP KV+R A+
Sbjct: 502 PLKLIAKNAGVNGSVVSEKVLSSDNPKHGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAS 561
Query: 61 SM 62
S+
Sbjct: 562 SV 563
>sp|Q98IV5|CH601_RHILO 60 kDa chaperonin 1 OS=Rhizobium loti (strain MAFF303099) GN=groL1
PE=3 SV=1
Length = 543
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA + VEGS VVGKL + NLG+DA YVD+IK GI+DP KV+R A
Sbjct: 450 PIRQIAENSGVEGSIVVGKLADSKDHNLGFDAQNETYVDMIKAGIVDPAKVVRTALQDAG 509
Query: 61 SM 62
S+
Sbjct: 510 SI 511
>sp|A4IJV3|CH60_GEOTN 60 kDa chaperonin OS=Geobacillus thermodenitrificans (strain
NG80-2) GN=groL PE=3 SV=1
Length = 540
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A +EGS++ + L + +G++A GE+VD+I+EGI+DP KV R A S
Sbjct: 447 PVRQIAQNAGLEGSIIVERLKNEKAGIGFNAATGEWVDMIEEGIVDPTKVTRSALQNAAS 506
Query: 62 M 62
+
Sbjct: 507 V 507
>sp|B2V8F1|CH60_SULSY 60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1)
GN=groL PE=3 SV=1
Length = 544
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 1 MPVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA 59
+P+ IA A EGSV+ K+ DN N G+DA GEYVD+++ GI+DP KV+R A
Sbjct: 449 VPLKQIAYNAGFEGSVIIEKIKDVDNVNYGFDAATGEYVDMVEAGIIDPTKVVRTALQNA 508
Query: 60 TSM 62
S+
Sbjct: 509 ASI 511
>sp|Q5ZL72|CH60_CHICK 60 kDa heat shock protein, mitochondrial OS=Gallus gallus GN=HSPD1
PE=1 SV=1
Length = 573
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 1 MPVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
+P TIA A VEGS++ + + Q + +GYDA GE+V+++++GI+DP KV+R + A
Sbjct: 474 IPAMTIAKNAGVEGSLIVEKILQSSSEVGYDAMLGEFVNMVEKGIIDPTKVVRTALMDAA 533
Query: 61 SM 62
+
Sbjct: 534 GV 535
>sp|P10809|CH60_HUMAN 60 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPD1
PE=1 SV=2
Length = 573
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 1 MPVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
+P TIA A VEGS++ + + Q + +GYDA G++V+++++GI+DP KV+R + A
Sbjct: 474 IPAMTIAKNAGVEGSLIVEKIMQSSSEVGYDAMAGDFVNMVEKGIIDPTKVVRTALLDAA 533
Query: 61 SM 62
+
Sbjct: 534 GV 535
>sp|C4L1L2|CH60_EXISA 60 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 /
AT1b) GN=groL PE=3 SV=1
Length = 544
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A EGSV+ + L ++ +GY+A GEYVD+I GI+DP KV R A S
Sbjct: 449 PVRQIAENAGEEGSVIVEKLKNESVGVGYNAATGEYVDMIAHGIVDPAKVTRSALQNAAS 508
Query: 62 ---MFLN 65
MFL
Sbjct: 509 VSAMFLT 515
>sp|Q138M7|CH601_RHOPS 60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB5)
GN=groL1 PE=3 SV=1
Length = 547
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P IA A +GSV VGK+L +D N G+D+ GEY DL+K+GI+DP KV+R A
Sbjct: 450 PARQIAINAGEDGSVIVGKVLEKDQYNYGFDSQTGEYGDLVKKGIIDPTKVVRTAIQNAA 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
>sp|Q8R5T7|CH60_THETN 60 kDa chaperonin OS=Thermoanaerobacter tengcongensis (strain DSM
15242 / JCM 11007 / NBRC 100824 / MB4) GN=groL PE=3 SV=1
Length = 540
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV IA A V+GS+ V K+ +PN GYDA + E+ D+IK GI+DP KV R A
Sbjct: 449 PVRQIAENAGVDGSIIVEKIKAAKDPNFGYDAYREEFTDMIKRGIIDPTKVTRTALQNAA 508
Query: 61 SM 62
S+
Sbjct: 509 SI 510
>sp|A6LJ30|CH60_THEM4 60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM
12029) GN=groL PE=3 SV=1
Length = 539
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A +G+++ K+L QD+P G+DA KGEY D+ + GI+DP KV R A
Sbjct: 449 PINQIAKNAGYDGAIIIHKVLEQDDPAYGFDALKGEYCDMFERGIIDPAKVTRSALQNAA 508
Query: 61 SM 62
S+
Sbjct: 509 SI 510
>sp|Q20X88|CH602_RHOPB 60 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain BisB18)
GN=groL2 PE=3 SV=1
Length = 551
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGK+L + G+DA EYVD++ +GI+DP KV+R A+
Sbjct: 450 PIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAS 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
>sp|Q5WJN4|CH60_BACSK 60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3
SV=1
Length = 545
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 2 PVYTIAATAEVEGSVVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGATS 61
PV IA A +EGS++ + L + +GY+A GEYV++++ GILDP+KV R A S
Sbjct: 447 PVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSALQNAAS 506
Query: 62 ---MFLN 65
MFL
Sbjct: 507 VSAMFLT 513
>sp|A6UH06|CH604_SINMW 60 kDa chaperonin 4 OS=Sinorhizobium medicae (strain WSM419)
GN=groL4 PE=3 SV=1
Length = 544
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSVV-GKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS+V GKL+ + N G+DA YVD+IK GI+DP KV+R A
Sbjct: 450 PIRQIADNAGVEGSIVIGKLVDSSDQNQGFDAQTETYVDMIKAGIVDPAKVVRTALRDAG 509
Query: 61 SM 62
S+
Sbjct: 510 SI 511
>sp|Q60024|CH60_THEBR 60 kDa chaperonin OS=Thermoanaerobacter brockii GN=groL PE=1 SV=2
Length = 541
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
PV IA A V+GSV V K+ +PN GYDA K E+ D+ K GI+DP KV R A
Sbjct: 449 PVRQIATNAGVDGSVIVEKIKAAKDPNFGYDAYKEEFTDMFKAGIVDPTKVTRTALQNAA 508
Query: 61 SM 62
S+
Sbjct: 509 SI 510
>sp|P60364|CH601_RHOPA 60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=groL1 PE=3 SV=1
Length = 547
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 2 PVYTIAATAEVEGS-VVGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGAT 60
P+ IA A VEGS VVGK+L G+DA EYVD++ +GI+DP KV+R A+
Sbjct: 450 PIRQIAENAGVEGSIVVGKILENKTETFGFDAQTEEYVDMLAKGIVDPAKVVRTALQDAS 509
Query: 61 SM 62
S+
Sbjct: 510 SV 511
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.140 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,098,251
Number of Sequences: 539616
Number of extensions: 1609752
Number of successful extensions: 6590
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 5451
Number of HSP's gapped (non-prelim): 1123
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)