Query 034233
Match_columns 100
No_of_seqs 109 out of 1041
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 19:15:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/034233.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/034233hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ruv_A Chaperonin, CPN; double 99.9 1.8E-23 6E-28 169.9 7.9 95 1-95 439-540 (543)
2 1iok_A Chaperonin 60; chaperon 99.9 4.8E-23 1.6E-27 167.8 7.6 92 1-93 449-543 (545)
3 1kp8_A Groel protein; chaperon 99.9 1.5E-22 5.1E-27 165.0 7.8 77 1-78 448-527 (547)
4 1we3_A CPN60(groel); chaperoni 99.9 4.7E-22 1.6E-26 161.8 8.0 91 1-92 448-542 (543)
5 3rtk_A 60 kDa chaperonin 2; he 99.9 4.2E-22 1.5E-26 162.4 6.0 90 1-91 446-538 (546)
6 3aq1_B Thermosome subunit; gro 99.8 6.6E-22 2.2E-26 159.3 6.7 90 1-92 397-492 (500)
7 3p9d_G T-complex protein 1 sub 99.8 1E-21 3.4E-26 159.9 5.1 84 1-84 448-537 (550)
8 1a6d_A Thermosome (alpha subun 99.8 6.9E-21 2.4E-25 154.8 6.5 77 1-77 443-525 (545)
9 1q3q_A Thermosome alpha subuni 99.8 2E-20 7E-25 152.1 7.1 79 1-79 446-530 (548)
10 1a6d_B Thermosome (beta subuni 99.8 2.2E-20 7.6E-25 151.6 6.6 89 1-89 444-538 (543)
11 3p9d_B T-complex protein 1 sub 99.8 1.4E-20 4.7E-25 152.3 4.9 79 1-79 439-523 (527)
12 3ko1_A Chaperonin; 9-fold symm 99.8 2.6E-20 8.8E-25 151.8 6.3 79 1-79 453-538 (553)
13 3p9d_A T-complex protein 1 sub 99.8 4.5E-20 1.6E-24 150.4 6.4 79 1-79 457-553 (559)
14 3p9d_C T-complex protein 1 sub 99.8 6.8E-20 2.3E-24 150.5 6.2 76 1-76 507-588 (590)
15 3iyg_B T-complex protein 1 sub 99.8 5.6E-20 1.9E-24 148.4 5.2 75 1-75 432-512 (513)
16 3iyg_G T-complex protein 1 sub 99.8 1.3E-19 4.4E-24 146.4 6.0 74 1-74 434-514 (515)
17 3p9d_E T-complex protein 1 sub 99.8 1.8E-19 6.1E-24 147.0 6.5 75 1-75 478-559 (562)
18 3p9d_F T-complex protein 1 sub 99.8 8.9E-20 3E-24 148.2 4.5 79 1-79 453-542 (546)
19 3iyg_D T-complex protein 1 sub 99.8 3E-19 1E-23 144.3 7.3 73 1-73 439-517 (518)
20 3iyg_Q T-complex protein 1 sub 99.8 1.8E-19 6.3E-24 145.3 6.0 73 1-73 431-511 (512)
21 3iyg_H T-complex protein 1 sub 99.8 1.6E-19 5.4E-24 146.0 5.4 73 1-73 435-513 (515)
22 3p9d_H T-complex protein 1 sub 99.8 5.8E-21 2E-25 155.9 -3.1 89 2-90 459-566 (568)
23 3iyg_E T-complex protein 1 sub 99.8 2.2E-19 7.4E-24 144.9 5.8 73 1-73 435-514 (515)
24 3p9d_D T-complex protein 1 sub 99.8 2.1E-19 7.1E-24 145.6 5.4 73 1-73 449-527 (528)
25 3iyg_Z T-complex protein 1 sub 99.8 2E-19 6.9E-24 145.4 5.3 71 2-73 440-516 (517)
26 3iyg_A T-complex protein 1 sub 99.8 4.6E-19 1.6E-23 143.5 5.6 75 1-75 441-529 (529)
No 1
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.89 E-value=1.8e-23 Score=169.94 Aligned_cols=95 Identities=17% Similarity=0.253 Sum_probs=69.6
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCC----CCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQD----NPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~----~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
.|.++||+|||+|+.+ +.+||+.+ +.++|||+.+|+|.||++.|||||++||+++|++| +|++|||+|++|+.
T Consensus 439 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~ 518 (543)
T 3ruv_A 439 VIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAA 518 (543)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheec
Confidence 3789999999999999 99998742 46799999999999999999999999999999999 99999999999999
Q ss_pred CCccchhhhhccCCCCCCCccC
Q 034233 74 DPERKHKKYKKKKKLDDVGIIQ 95 (100)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~ 95 (100)
.|..++...++|++|+|||..+
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~ 540 (543)
T 3ruv_A 519 EKLRGAPDMGDMGGMPGMGGMP 540 (543)
T ss_dssp C---------------------
T ss_pred CccCCCCCCCCCCCCCCCCCCC
Confidence 8876654444445555554433
No 2
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.88 E-value=4.8e-23 Score=167.79 Aligned_cols=92 Identities=30% Similarity=0.461 Sum_probs=71.9
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCCCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecCCcc
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLEDPER 77 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~~~~ 77 (100)
.|.++||+|||+|+.+ +++||+.++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+..|++
T Consensus 449 ~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~ 528 (545)
T 1iok_A 449 APMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEP 528 (545)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC--
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCcc
Confidence 3899999999999999 9999987677899999999999999999999999999999999 999999999999998865
Q ss_pred chhhhhccCCCCCCCc
Q 034233 78 KHKKYKKKKKLDDVGI 93 (100)
Q Consensus 78 ~~~~~~~~~~~~~~~~ 93 (100)
++ +..+|++|+|||.
T Consensus 529 ~~-~~~~~~~~~~~~~ 543 (545)
T 1iok_A 529 KA-PAGGMPDMGGMGG 543 (545)
T ss_dssp ----------------
T ss_pred CC-CCCCCCCCCCCCC
Confidence 43 2244555555553
No 3
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.87 E-value=1.5e-22 Score=165.03 Aligned_cols=77 Identities=30% Similarity=0.405 Sum_probs=71.5
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCCCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecCCcc
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLEDPER 77 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~~~~ 77 (100)
.|.++||+|||+|+.+ +++||+. +.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+..|++
T Consensus 448 ~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~ 526 (547)
T 1kp8_A 448 APLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKN 526 (547)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC-
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCcc
Confidence 3899999999999999 9999976 57899999999999999999999999999999999 999999999999998865
Q ss_pred c
Q 034233 78 K 78 (100)
Q Consensus 78 ~ 78 (100)
+
T Consensus 527 ~ 527 (547)
T 1kp8_A 527 D 527 (547)
T ss_dssp -
T ss_pred C
Confidence 4
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.86 E-value=4.7e-22 Score=161.84 Aligned_cols=91 Identities=34% Similarity=0.562 Sum_probs=72.5
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC-CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecCCc
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ-DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLEDPE 76 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~-~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~~~ 76 (100)
.|.++||+|||+|+.+ +++||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+..|+
T Consensus 448 ~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~ 527 (543)
T 1we3_A 448 EPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPE 527 (543)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSC
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 3899999999999999 9999975 357899999999999999999999999999999999 99999999999999887
Q ss_pred cchhhhhccCCCCCCC
Q 034233 77 RKHKKYKKKKKLDDVG 92 (100)
Q Consensus 77 ~~~~~~~~~~~~~~~~ 92 (100)
++++.++ +.+++|||
T Consensus 528 ~~~~~~~-~~~~~~~~ 542 (543)
T 1we3_A 528 KKESTPA-SAGAGDMD 542 (543)
T ss_dssp C---------------
T ss_pred cCCCCCC-CCCCCCCC
Confidence 6654444 34467775
No 5
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.85 E-value=4.2e-22 Score=162.44 Aligned_cols=90 Identities=23% Similarity=0.361 Sum_probs=63.6
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCCCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecCCcc
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQDNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLEDPER 77 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~~~~ 77 (100)
.|.++||+|||+|+.+ +++||+. ..++|||+.+|+|+||++.|||||++|++++|++| +|++|||+|++|++.|++
T Consensus 446 ~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~ 524 (546)
T 3rtk_A 446 APLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEK 524 (546)
T ss_dssp HHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred HHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3899999999999999 9999986 45599999999999999999999999999999999 999999999999998877
Q ss_pred chhhhhccCCCCCC
Q 034233 78 KHKKYKKKKKLDDV 91 (100)
Q Consensus 78 ~~~~~~~~~~~~~~ 91 (100)
++...++.+.|+||
T Consensus 525 ~~~~~~~~~~~~~~ 538 (546)
T 3rtk_A 525 EKASVPGGGDMGGM 538 (546)
T ss_dssp --------------
T ss_pred CCCCCCCCCCcCcc
Confidence 66443444444444
No 6
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=99.85 E-value=6.6e-22 Score=159.29 Aligned_cols=90 Identities=18% Similarity=0.286 Sum_probs=62.8
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecC
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLED 74 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~ 74 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+..
T Consensus 397 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 476 (500)
T 3aq1_B 397 VIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASK 476 (500)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3889999999999999 9999864 345799999999999999999999999999999999 999999999999998
Q ss_pred CccchhhhhccCCCCCCC
Q 034233 75 PERKHKKYKKKKKLDDVG 92 (100)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~ 92 (100)
|+.+++ + +|++|+|||
T Consensus 477 ~~~~~~-~-~~g~~~~~~ 492 (500)
T 3aq1_B 477 GSANQG-M-GPGGLPDMP 492 (500)
T ss_dssp ------------------
T ss_pred ccCCCC-C-CCCCCCCCC
Confidence 865543 2 355444443
No 7
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.84 E-value=1e-21 Score=159.92 Aligned_cols=84 Identities=11% Similarity=0.009 Sum_probs=72.1
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecC
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLED 74 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~ 74 (100)
.|.++||+|||+|+.+ +++||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+..
T Consensus 448 ~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~ 527 (550)
T 3p9d_G 448 VIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNK 527 (550)
T ss_dssp HHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCC
Confidence 3889999999999999 9999875 356799999999999999999999999999999999 999999999999998
Q ss_pred Cccchhhhhc
Q 034233 75 PERKHKKYKK 84 (100)
Q Consensus 75 ~~~~~~~~~~ 84 (100)
|++++...++
T Consensus 528 ~~~~~~~~~~ 537 (550)
T 3p9d_G 528 GSESANAGMM 537 (550)
T ss_dssp CCC-------
T ss_pred CcccccCCCC
Confidence 8766654333
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.82 E-value=6.9e-21 Score=154.76 Aligned_cols=77 Identities=18% Similarity=0.260 Sum_probs=66.8
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecC
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLED 74 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~ 74 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|.||++.|||||++||+++|++| +|++|||+|++|...
T Consensus 443 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~ 522 (545)
T 1a6d_A 443 IIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASK 522 (545)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC---
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3789999999999999 9999864 345799999999999999999999999999999999 999999999999998
Q ss_pred Ccc
Q 034233 75 PER 77 (100)
Q Consensus 75 ~~~ 77 (100)
|++
T Consensus 523 ~~~ 525 (545)
T 1a6d_A 523 KST 525 (545)
T ss_dssp ---
T ss_pred cCC
Confidence 765
No 9
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.81 E-value=2e-20 Score=152.08 Aligned_cols=79 Identities=18% Similarity=0.385 Sum_probs=70.3
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecC
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLED 74 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~ 74 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|.||++.|||||++||+++|++| +|++|||+|++|...
T Consensus 446 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~ 525 (548)
T 1q3q_A 446 IIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAK 525 (548)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3789999999999999 9999965 246799999999999999999999999999999999 999999999999998
Q ss_pred Cccch
Q 034233 75 PERKH 79 (100)
Q Consensus 75 ~~~~~ 79 (100)
|++++
T Consensus 526 ~~~~~ 530 (548)
T 1q3q_A 526 ATKPE 530 (548)
T ss_dssp C----
T ss_pred CcCCC
Confidence 76543
No 10
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.81 E-value=2.2e-20 Score=151.62 Aligned_cols=89 Identities=17% Similarity=0.275 Sum_probs=67.8
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecC
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLED 74 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~ 74 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+..
T Consensus 444 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~ 523 (543)
T 1a6d_B 444 EIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATK 523 (543)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC--
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3789999999999999 9999864 346799999999999999999999999999999999 999999999999998
Q ss_pred CccchhhhhccCCCC
Q 034233 75 PERKHKKYKKKKKLD 89 (100)
Q Consensus 75 ~~~~~~~~~~~~~~~ 89 (100)
|+++++.++..+.|+
T Consensus 524 ~~~~~~~~~~~~~~~ 538 (543)
T 1a6d_B 524 SSSSSSNPPKSGSSS 538 (543)
T ss_dssp ---------------
T ss_pred ccCCCCCCCCCCCcc
Confidence 876665555555554
No 11
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.80 E-value=1.4e-20 Score=152.30 Aligned_cols=79 Identities=23% Similarity=0.265 Sum_probs=69.8
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecC
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLED 74 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~ 74 (100)
.|.++||+|||+|+.+ +++||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+..
T Consensus 439 ~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~ 518 (527)
T 3p9d_B 439 QLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRAR 518 (527)
T ss_dssp HHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC
T ss_pred HHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcC
Confidence 3889999999999999 9999875 356799999999999999999999999999999999 999999999999998
Q ss_pred Cccch
Q 034233 75 PERKH 79 (100)
Q Consensus 75 ~~~~~ 79 (100)
|+++.
T Consensus 519 ~~~~~ 523 (527)
T 3p9d_B 519 PRTAN 523 (527)
T ss_dssp -----
T ss_pred CcccC
Confidence 76543
No 12
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.80 E-value=2.6e-20 Score=151.81 Aligned_cols=79 Identities=18% Similarity=0.206 Sum_probs=68.7
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCC---C-CCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQD---N-PNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~---~-~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
.|.++||+|||+|+.+ +.+||+.+ + .++|||+.+|+|.||++.|||||++||+++|++| +|++|||+|++|+.
T Consensus 453 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 532 (553)
T 3ko1_A 453 SLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSA 532 (553)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC
T ss_pred hHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHh
Confidence 3789999999999999 99999763 2 6799999999999999999999999999999999 99999999999999
Q ss_pred CCccch
Q 034233 74 DPERKH 79 (100)
Q Consensus 74 ~~~~~~ 79 (100)
.|..++
T Consensus 533 ~~~~~~ 538 (553)
T 3ko1_A 533 GKKSGG 538 (553)
T ss_dssp ------
T ss_pred hhhccC
Confidence 876655
No 13
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.80 E-value=4.5e-20 Score=150.42 Aligned_cols=79 Identities=28% Similarity=0.336 Sum_probs=71.7
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCC---CC------------CeeEeccCCceechhhCCcccChhHHHHHHHHH--HHH
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQD---NP------------NLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSM 62 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~---~~------------~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~ 62 (100)
.|.++||+|||+|+.+ +.+||+.+ +. ++|||+.+|+|+||++.|||||++||+++|++| +|+
T Consensus 457 ~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~ 536 (559)
T 3p9d_A 457 IIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACV 536 (559)
T ss_dssp HHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHH
Confidence 3789999999999999 99998752 33 689999999999999999999999999999999 999
Q ss_pred HhccccceeecCCccch
Q 034233 63 FLNKLREGQLEDPERKH 79 (100)
Q Consensus 63 ~iL~~d~vV~~~~~~~~ 79 (100)
+|||+|++|+..|++++
T Consensus 537 ~iL~id~ii~~~~~~~~ 553 (559)
T 3p9d_A 537 AILRIDTMITVDPEPPK 553 (559)
T ss_dssp HHHTEEEEEECCCCCCC
T ss_pred HHHhHHhhhhcCCcccc
Confidence 99999999998876553
No 14
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.79 E-value=6.8e-20 Score=150.51 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=70.2
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecC
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLED 74 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~ 74 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+..
T Consensus 507 ~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~ 586 (590)
T 3p9d_C 507 CIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGV 586 (590)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3899999999999999 9999874 467899999999999999999999999999999999 999999999999876
Q ss_pred Cc
Q 034233 75 PE 76 (100)
Q Consensus 75 ~~ 76 (100)
|+
T Consensus 587 ~~ 588 (590)
T 3p9d_C 587 RK 588 (590)
T ss_dssp C-
T ss_pred CC
Confidence 54
No 15
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.79 E-value=5.6e-20 Score=148.44 Aligned_cols=75 Identities=23% Similarity=0.301 Sum_probs=69.9
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeecC
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLED 74 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~~ 74 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|.||++.|||||++||+++|++| +|++|||+|++|+..
T Consensus 432 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~ 511 (513)
T 3iyg_B 432 MLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAA 511 (513)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3889999999999999 9999875 356799999999999999999999999999999999 999999999999876
Q ss_pred C
Q 034233 75 P 75 (100)
Q Consensus 75 ~ 75 (100)
|
T Consensus 512 ~ 512 (513)
T 3iyg_B 512 P 512 (513)
T ss_pred C
Confidence 5
No 16
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.78 E-value=1.3e-19 Score=146.36 Aligned_cols=74 Identities=19% Similarity=0.254 Sum_probs=68.3
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCC----CCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQD----NPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~----~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
.|.++||+|||+|+.+ +.+||+.+ +.++|||+.+|+|.||++.|||||++||+++|++| +|++|||+|++|..
T Consensus 434 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 513 (515)
T 3iyg_G 434 VIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSG 513 (515)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeec
Confidence 4789999999999999 99998752 45799999999999999999999999999999999 99999999999875
Q ss_pred C
Q 034233 74 D 74 (100)
Q Consensus 74 ~ 74 (100)
.
T Consensus 514 ~ 514 (515)
T 3iyg_G 514 H 514 (515)
T ss_pred C
Confidence 3
No 17
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.78 E-value=1.8e-19 Score=146.99 Aligned_cols=75 Identities=15% Similarity=0.129 Sum_probs=69.5
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC----CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ----DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~----~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+.
T Consensus 478 ~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 557 (562)
T 3p9d_E 478 TIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIIS 557 (562)
T ss_dssp HHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEC
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 3789999999999999 9999864 356899999999999999999999999999999999 99999999999987
Q ss_pred CC
Q 034233 74 DP 75 (100)
Q Consensus 74 ~~ 75 (100)
.+
T Consensus 558 ~~ 559 (562)
T 3p9d_E 558 GK 559 (562)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 18
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=99.78 E-value=8.9e-20 Score=148.17 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=71.0
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC--------CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccc
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ--------DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLRE 69 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~--------~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~ 69 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|+
T Consensus 453 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ 532 (546)
T 3p9d_F 453 VIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDE 532 (546)
T ss_dssp HHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEE
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999999999 9999864 346799999999999999999999999999999999 9999999999
Q ss_pred eeecCCccch
Q 034233 70 GQLEDPERKH 79 (100)
Q Consensus 70 vV~~~~~~~~ 79 (100)
+|+..+...+
T Consensus 533 ii~~~~~~~~ 542 (546)
T 3p9d_F 533 LLRAGRSTLK 542 (546)
T ss_dssp EEEECCSSCC
T ss_pred HHcCCcccCC
Confidence 9988654433
No 19
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.77 E-value=3e-19 Score=144.29 Aligned_cols=73 Identities=21% Similarity=0.210 Sum_probs=68.2
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+.
T Consensus 439 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 517 (518)
T 3iyg_D 439 VIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNT 517 (518)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence 3889999999999999 9999874 356799999999999999999999999999999999 99999999999875
No 20
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.77 E-value=1.8e-19 Score=145.27 Aligned_cols=73 Identities=18% Similarity=0.208 Sum_probs=67.5
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCC--ceechhhCCcccChhHHHHHHHHH--HHHHhccccceee
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKG--EYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQL 72 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~--~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~ 72 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.++ +|+||++.|||||++||+++|++| +|++|||+|++|+
T Consensus 431 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~ 510 (512)
T 3iyg_Q 431 AIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIM 510 (512)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHhee
Confidence 3889999999999999 9999874 467899999965 999999999999999999999999 9999999999987
Q ss_pred c
Q 034233 73 E 73 (100)
Q Consensus 73 ~ 73 (100)
.
T Consensus 511 ~ 511 (512)
T 3iyg_Q 511 A 511 (512)
T ss_pred c
Confidence 5
No 21
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.77 E-value=1.6e-19 Score=145.97 Aligned_cols=73 Identities=14% Similarity=0.168 Sum_probs=67.9
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCC---CCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQD---NPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~---~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
.|.++||+|||+|+.+ +.+||+.+ +.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+.
T Consensus 435 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 513 (515)
T 3iyg_H 435 IIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKN 513 (515)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4889999999999999 99998752 45689999999999999999999999999999999 99999999999875
No 22
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=99.77 E-value=5.8e-21 Score=155.94 Aligned_cols=89 Identities=16% Similarity=0.115 Sum_probs=58.9
Q ss_pred hHHHHHhhcCCChHH-HHHHHcCC-----------CCCeeEeccCCc---eechhhCCcccChhHHHHHHHHH--HHHHh
Q 034233 2 PVYTIAATAEVEGSV-VGKLLGQD-----------NPNLGYDATKGE---YVDLIKEGILDPLKVIRKVFIGA--TSMFL 64 (100)
Q Consensus 2 P~~~La~NAG~d~~~-v~kL~~~~-----------~~~~G~d~~~~~---~~Dm~~~GIiDP~~V~~~al~~A--~a~~i 64 (100)
|.++||+|||+|+.+ +.+||+.+ +.++|||+.+|+ |.||++.|||||++||+++|++| +|++|
T Consensus 459 ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 538 (568)
T 3p9d_H 459 VPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTV 538 (568)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHH
Confidence 789999999999999 99999763 347899999997 99999999999999999999999 99999
Q ss_pred ccccceeecCCccchhhhh--ccCCCCC
Q 034233 65 NKLREGQLEDPERKHKKYK--KKKKLDD 90 (100)
Q Consensus 65 L~~d~vV~~~~~~~~~~~~--~~~~~~~ 90 (100)
||+|++|+..|...++.++ +.+.||+
T Consensus 539 L~iD~ii~~~~~~~~~~~~~~~~~~~~~ 566 (568)
T 3p9d_H 539 LSIDQIIMAKKAGGPRAPQGPRPGNWDQ 566 (568)
T ss_dssp ----------------------------
T ss_pred HhHHHHhhccccCCCCCCCCCCCCCCCC
Confidence 9999999999887776443 3446764
No 23
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.77 E-value=2.2e-19 Score=144.95 Aligned_cols=73 Identities=14% Similarity=0.155 Sum_probs=67.8
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcC----CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQ----DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~----~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
.|.++||+|||+|+.+ +.+||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+.
T Consensus 435 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 435 VIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 3889999999999999 9999864 356799999999999999999999999999999999 99999999999865
No 24
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.77 E-value=2.1e-19 Score=145.63 Aligned_cols=73 Identities=18% Similarity=0.170 Sum_probs=68.2
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCC---CCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQD---NPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~---~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
.|.++||+|||+|+.+ +.+||+.+ +.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|+.
T Consensus 449 ~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 527 (528)
T 3p9d_D 449 VIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFS 527 (528)
T ss_dssp HHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBC
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheec
Confidence 3889999999999999 99998753 56799999999999999999999999999999999 99999999999875
No 25
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.77 E-value=2e-19 Score=145.38 Aligned_cols=71 Identities=17% Similarity=0.176 Sum_probs=66.5
Q ss_pred hHHHHHhhcCCChHH-HHHHHcC---CCCCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhccccceeec
Q 034233 2 PVYTIAATAEVEGSV-VGKLLGQ---DNPNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNKLREGQLE 73 (100)
Q Consensus 2 P~~~La~NAG~d~~~-v~kL~~~---~~~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~~d~vV~~ 73 (100)
| ++||+|||+|+.+ +.+||+. ++.++|||+.+|+|+||++.|||||++||+++|++| +|++|||+|++|..
T Consensus 440 P-~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 440 P-KVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred H-HHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 7 9999999999999 9999875 356799999999999999999999999999999999 99999999999864
No 26
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.76 E-value=4.6e-19 Score=143.52 Aligned_cols=75 Identities=21% Similarity=0.231 Sum_probs=68.5
Q ss_pred ChHHHHHhhcCCChHH-HHHHHcCC---C--------CCeeEeccCCceechhhCCcccChhHHHHHHHHH--HHHHhcc
Q 034233 1 MPVYTIAATAEVEGSV-VGKLLGQD---N--------PNLGYDATKGEYVDLIKEGILDPLKVIRKVFIGA--TSMFLNK 66 (100)
Q Consensus 1 ~P~~~La~NAG~d~~~-v~kL~~~~---~--------~~~G~d~~~~~~~Dm~~~GIiDP~~V~~~al~~A--~a~~iL~ 66 (100)
.|.++||+|||+|+.+ +.+||+.+ + .++|||+.+|++.||++.|||||++||+++|++| +|++|||
T Consensus 441 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~ 520 (529)
T 3iyg_A 441 VIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILR 520 (529)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHh
Confidence 3789999999999999 99998752 2 5699999999999999999999999999999999 9999999
Q ss_pred ccceeecCC
Q 034233 67 LREGQLEDP 75 (100)
Q Consensus 67 ~d~vV~~~~ 75 (100)
+|++|...|
T Consensus 521 iD~ii~~~~ 529 (529)
T 3iyg_A 521 IDDLIKLHP 529 (529)
T ss_pred HHhhhcCCC
Confidence 999997743
Done!