BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 034236
(100 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BBO|I Chain I, Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 223
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 33 LNWAVHRHLFYKDADDLRLRFEANKHVTDLDAIDRMIDEAEATYNKWRHPDPYIGK 88
LN + + D L+++ E N +T I + AT KWR P+PY GK
Sbjct: 148 LNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSEIGQFAATVRKWRPPEPYKGK 203
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde
Dehydrogenase From Lactobacillus Acidophilus
Length = 484
Score = 29.6 bits (65), Expect = 0.40, Method: Composition-based stats.
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 65 IDRMIDEAEATYNKWRHPDP 84
ID I+ A A Y KWRH +P
Sbjct: 28 IDEAINLAHALYKKWRHEEP 47
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 28.9 bits (63), Expect = 0.81, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + RR W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTS--------VRRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 114 SGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENH 165
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 166 TLDFDALINSLNEAQA 181
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 114 SGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENH 165
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 166 TLDFDALINSLNEAQA 181
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 114 SGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENH 165
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 166 TLDFDALINSLNEAQA 181
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 SGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 SGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 SGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 SGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + RR +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTS--------VRRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 28.1 bits (61), Expect = 1.5, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R W H+ +F ++R ++A H
Sbjct: 114 SGALRVAADFLAKNTSVK--------RVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENH 165
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 166 TLDFDALINSLNEAQA 181
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 27.7 bits (60), Expect = 1.5, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ AA ++A+ + K R W H+ +F ++R ++A H
Sbjct: 114 SGALRVAADFLAKNTSVK--------RVWVSNPTWPNHKAIFNSAGLEVREYAYYDAENH 165
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 166 TLDFDALINSLNEAQA 181
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 15/87 (17%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA----TYNKWRH 81
D DA+ ++EA+A ++ W H
Sbjct: 156 TLDFDALINSLNEAQAGDVVLFHGWCH 182
>pdb|2AML|A Chain A, Crystal Structure Of Lmo0035 Protein (46906266) From
Listeria Monocytogenes 4b F2365 At 1.50 A Resolution
pdb|2AML|B Chain B, Crystal Structure Of Lmo0035 Protein (46906266) From
Listeria Monocytogenes 4b F2365 At 1.50 A Resolution
Length = 373
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 40 HLFYKDA--DDLRLRFEANKHVTDLDAIDRMIDEAEATYNKWR 80
H YK D+ R E + +DAI I E EA Y +W+
Sbjct: 176 HFAYKTVQIDETRFNNEISAFSRAIDAIPATIAETEAFYERWQ 218
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
pdb|1BQD|B Chain B, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
Length = 396
Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNASWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 114 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 165
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 166 TLDFDALINSLNEAQA 181
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
+GA+ AA ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 104 TGALRVAADFLAKNTSVK--------RVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENH 155
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 156 TLDFDALINSLNEAQA 171
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 26.6 bits (57), Expect = 3.4, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 2 SGAISTAA-YVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLR--LRFEANKH 58
SGA+ A ++A+ + K R +W H+ +F ++R ++A H
Sbjct: 114 SGALRVGADFLAKNTSVK--------RVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENH 165
Query: 59 VTDLDAIDRMIDEAEA 74
D DA+ ++EA+A
Sbjct: 166 TLDFDALINSLNEAQA 181
>pdb|1B0Z|A Chain A, The Crystal Structure Of Phosphoglucose Isomerase-An
Enzyme With Autocrine Motility Factor Activity In Tumor
Cells
pdb|1C7Q|A Chain A, The Crystal Structure Of Phosphoglucose IsomeraseAUTOCRINE
MOTILITY FactorNEUROLEUKIN COMPLEXED WITH ITS
CARBOHYDRATE PHOSPHATE Inhibitors And Its Substrate
Recognition Mechanism
pdb|1C7R|A Chain A, The Crystal Structure Of Phosphoglucose IsomeraseAUTOCRINE
MOTILITY FactorNEUROLEUKIN COMPLEXED WITH ITS
CARBOHYDRATE PHOSPHATE Inhibitors And Its Substrate
Recognition Mechanism
pdb|2PGI|A Chain A, The Crystal Structure Of Phosphoglucose Isomerase-An
Enzyme With Autocrine Motility Factor Activity In Tumor
Cells
Length = 445
Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats.
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 65 IDRMIDEAEATYNKWRHPD 83
IDRM++ A + Y+K+ +PD
Sbjct: 221 IDRMMEGAASAYHKYNNPD 239
>pdb|1IM4|A Chain A, Crystal Structure Of A Dinb Homolog (Dbh) Lesion Bypass
Dna Polymerase Catalytic Fragment From Sulfolobus
Solfataricus
Length = 221
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 2 SGAISTAAYVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLRLRFEANKHVTD 61
SGA++TA Y AR+ K + I+ + + + R Y +A R+ NKH
Sbjct: 45 SGAVATANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPIY-EAFSNRIMNLLNKHADK 103
Query: 62 LDAIDRMIDEA 72
++ IDEA
Sbjct: 104 IEVAS--IDEA 112
>pdb|4D93|A Chain A, Crystal Structure Of Tep1s
pdb|4D93|B Chain B, Crystal Structure Of Tep1s
pdb|4D93|C Chain C, Crystal Structure Of Tep1s
Length = 1323
Score = 25.4 bits (54), Expect = 7.7, Method: Composition-based stats.
Identities = 15/81 (18%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 1 MSGAISTAAYVARRAAQKERVQILYRRALKDTLNWAVHRHLFYKDADDLRLRFEA---NK 57
+ ++ +YV + + ++ + +++ +N+ ++ F + DL + A N
Sbjct: 958 LRNGVALTSYVLTALLENDIAKVKHAVVIQNGMNYLSNQLAFINNPYDLSIATYAMMLNG 1017
Query: 58 HVTDLDAIDRMIDEAEATYNK 78
H +A+D++ID + + NK
Sbjct: 1018 HTMKKEALDKLIDMSISDNNK 1038
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.136 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,948,201
Number of Sequences: 62578
Number of extensions: 100438
Number of successful extensions: 413
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 404
Number of HSP's gapped (non-prelim): 67
length of query: 100
length of database: 14,973,337
effective HSP length: 66
effective length of query: 34
effective length of database: 10,843,189
effective search space: 368668426
effective search space used: 368668426
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 45 (21.9 bits)